Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0000207

Physical Location & Seq

Genomic Coordinates Reverse (-)

30970832 .. 30981398

Gene Structure 10567 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG283300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGATAAACAGCACAGGATATCTTGTGCTGTTGGGTCAGAATCAGAGTGTTGTGTGGTGGACAAGTTTAGCTAAGTATGCACAGAGTACAATGGTACAGCTATTAGATTCTGGAAATTTAGTTTTAAGAGATGTGACAGATGGAAAGTCATTGTGGCAAAGCTTCGATTATCCTTCTGATACATTGTTACCAGAAATGAAGATGGGATGGGACTTTAGGACAGGTCTTAAAAGGGGATTATCAGCATGGAAAAATTCAGAAGACCCATGTCCAGGGGAATTCACTTATGGGATTGAAATGGAACCTCATGCATATCCTGAGGCATATTTTCGGAAAGGTGGTGTGAAATATTATCGTTCTGGCCCATGGAATGGCCTAAGATTCAGTGGTGCACCAGAACTAAGGCCTAATCCAATTTATAGTTTCGACTTTGTGTATAATGATGATGAAGTGTACTACATGTACAAACTTCAAAACAAGTCTGTAATTTCAATCATGGTCTTAAATGAAACCACGAGCACACGCGATCGCCTTACATGGATTGCAGCAGAGCAAACTTGGAGGGCCTATGCATCAGTACCTAGAGATTTCTGTGATCAATATGACCTCTGTGGAGCAAATGCAAATTGTATCATTAGTAACAATCCAGTCTGTCAATGTCTACAAGGATTCACTCCTAAGTCACCAGAGAAATGGAATTTGACAGACTGGTCACTTGGATGTACGCACAAGAAACCCCTAAGCTGCCAGGAAAGTGATAAAGACGGGTTTGTCAAGTTTACTAACTTGAAATTGCCGGATACTACACATTCTTGGGTGAACAAAAGTATGAACATCAAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCCTGTATGGCTTATACAAGCTCGGATATCAGAGCAGGAGGTTCTGGCTGCGCCATTTGGTTTGGCGATCTACTAGATATCAGAAACTTTCCGGGTGCTGGCCAGGATCTATACATTCGAATGTCGGCTTCAGAGATAGATGATGATAAAGTGAACACAGGAGTTATAGTTGCTGTTGTGATACCTGCAGTGTTTTCAGGAATGCTCTTAGTTGGCTACTATGTCTACCGAAGCAGGACCAAATTGAAAGCTAACATTAGGTTCATTTATGCTATATCAGAGACAGAGAAACGAGAAGAAAGGGCACAAAAGGAGGACCTGGAGCTCCCGCTCTTCAACATAAGCACAATAGCTAGTGCAACAGATAACTTTTCAGATGATATGAAGCTTGGAGAAGGTGGCTTTGGACCTGTTTACAGGGCTTGGAGATTGTGGAATGAAGGAAGGCCTTTAGAATTGATTGATTCATGGTTAGAGAGCTCATGTAATCTATCAGATGTGTTACGTTGCATTCAAGTTAGTTTTTTGTGCGTGCAACATCATCCTGAGGATCGGCCAAGCATGGCTTCTGTGGTTATAATGTTGGGAAGTGATATTGCATTGGCTCAACCTAAACAACCTGGTTTCTTTATGGAAAAGGAACATGAAGCAGGCCCTGATATAGGTTCATGCTGCTTTGTTGAGGACATGTTCATATATCTAAAACAGCGAATCACCGCCGCCCCCTTACCTGATCCATCTATCACACCTGCCACCAAGGGCATAGCTACCATAGGTCGAGAAGGGTTCTCAACTGTTATAAACTGCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0030054 GO:0031625 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

560

Amino Acids

63.06

Weight (kDa)

5.34

Isoelectric Point (pI)

41.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	2 - 84	5.1e-25	D-mannose binding lectin
S_locus_glycop	PF00954	118 - 228	5.8e-30	S-locus glycoprotein domain
PAN_2	PF08276	249 - 317	4.5e-23	PAN-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27300
fragaria_vesca	FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica	MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica	Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis	pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis	RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata	RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora	Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii	Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa	Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha	Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana	Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1448, 1670
AarI	CACCTGC	1 cut(s)	1627
AasI	GACNNNNNNGTC	2 cut(s)	709, 770
Acc36I	ACCTGC	2 cut(s)	1063, 1627
AccB7I	CCANNNNNTGG	1 cut(s)	371
AccBSI	CCGCTC	1 cut(s)	1201
AccI	GTMKAC	2 cut(s)	661, 1095
AccII	CGCG	1 cut(s)	525
AciI	CCGC	3 cut(s)	1199, 1587, 1590
AclWI	GGATC	3 cut(s)	984, 1428, 1598
AcoI	YGGCCR	2 cut(s)	970, 1424
AcsI	RAATTY	4 cut(s)	115, 253, 278, 697
AcuI	CTGAAG	1 cut(s)	984
AfaI	GTAC	6 cut(s)	88, 96, 455, 464, 579, 724
AfiI	CCNNNNNNNGG	4 cut(s)	272, 371, 968, 1532
AflIII	ACRYGT	2 cut(s)	459, 1557
AgsI	TTSAA	8 cut(s)	296, 473, 492, 790, 862, 1117, 1207, 1385
AjnI	CCWGG	5 cut(s)	271, 747, 972, 1188, 1489
AjuI	GAANNNNNNNTTGG	4 cut(s)	1257, 1289, 1420, 1452
AloI	GAACNNNNNNTCC	2 cut(s)	854, 886
Alw21I	GWGCWC	4 cut(s)	394, 521, 1197, 1352
Alw26I	GTCTC	1 cut(s)	1145
Alw44I	GTGCAC	1 cut(s)	390
AlwI	GGATC	3 cut(s)	984, 1428, 1598
AlwNI	CAGNNNCTG	1 cut(s)	1526
AoxI	GGCC	8 cut(s)	361, 373, 404, 564, 970, 1316, 1424, 1522
ApaLI	GTGCAC	1 cut(s)	390
ApeKI	GCWGC	4 cut(s)	545, 744, 918, 1542
ApoI	RAATTY	4 cut(s)	115, 253, 278, 697
AsiSI	GCGATCGC	1 cut(s)	529
AspLEI	GCGC	1 cut(s)	923
AspS9I	GGNCC	6 cut(s)	362, 564, 1107, 1186, 1277, 1523
AsuC2I	CCSGG	1 cut(s)	963
AsuHPI	GGTGA	3 cut(s)	675, 829, 1576
AsuII	TTCGAA	1 cut(s)	988
AvaII	GGWCC	3 cut(s)	1107, 1186, 1277
AxyI	CCTNAGG	2 cut(s)	318, 1416
BaeGI	GKGCMC	2 cut(s)	394, 1177
BalI	TGGCCA	1 cut(s)	972
BanII	GRGCYC	2 cut(s)	1197, 1352
BauI	CACGAG	1 cut(s)	514
BbsI	GAAGAC	1 cut(s)	267
Bbv12I	GWGCWC	4 cut(s)	394, 521, 1197, 1352
BbvI	GCAGC	4 cut(s)	557, 731, 905, 1529
BccI	CCATC	4 cut(s)	134, 196, 201, 1615
BciT130I	CCWGG	5 cut(s)	273, 749, 974, 1190, 1491
BciVI	GTATCC	1 cut(s)	793
BclI	TGATCA	1 cut(s)	595
BcnI	CCSGG	1 cut(s)	963
BcoDI	GTCTC	1 cut(s)	1145
BfaI	CTAG	3 cut(s)	582, 944, 1224
BfmI	CTRYAG	1 cut(s)	1056
BfuAI	ACCTGC	2 cut(s)	1063, 1627
BfuI	GTATCC	1 cut(s)	793
BisI	GCNGC	5 cut(s)	546, 745, 919, 1543, 1590
BlsI	GCNGC	5 cut(s)	547, 746, 920, 1544, 1591
Bme1390I	CCNGG	6 cut(s)	273, 749, 963, 974, 1190, 1491
Bme18I	GGWCC	3 cut(s)	1107, 1186, 1277
BmgT120I	GGNCC	6 cut(s)	362, 564, 1107, 1186, 1277, 1523
BmiI	GGNNCC	1 cut(s)	303
BmrFI	CCNGG	6 cut(s)	273, 749, 963, 974, 1190, 1491
BmsI	GCATC	1 cut(s)	581
BoxI	GACNNNNGTC	1 cut(s)	267
BpiI	GAAGAC	1 cut(s)	267
BpmI	CTGGAG	1 cut(s)	1211
Bpu10I	CCTNAGC	1 cut(s)	740
Bpu14I	TTCGAA	1 cut(s)	988
BpuMI	CCSGG	1 cut(s)	963
BsaJI	CCNNGG	3 cut(s)	272, 365, 1626
BsaXI	ACNNNNNCTCC	2 cut(s)	1023, 1053
Bsc4I	CCNNNNNNNGG	4 cut(s)	272, 371, 968, 1532
Bse1I	ACTGG	2 cut(s)	647, 713
Bse21I	CCTNAGG	2 cut(s)	318, 1416
BseBI	CCWGG	5 cut(s)	273, 749, 974, 1190, 1491
BseDI	CCNNGG	3 cut(s)	272, 365, 1626
BseGI	GGATG	3 cut(s)	212, 725, 1411
BseLI	CCNNNNNNNGG	4 cut(s)	272, 371, 968, 1532
BseMII	CTCAG	2 cut(s)	309, 1407
BseNI	ACTGG	2 cut(s)	647, 713
BseSI	GKGCMC	2 cut(s)	394, 1177
BseXI	GCAGC	4 cut(s)	557, 731, 905, 1529
Bsh1236I	CGCG	1 cut(s)	525
Bsh1285I	CGRYCG	1 cut(s)	529
BshFI	GGCC	8 cut(s)	363, 375, 406, 566, 972, 1318, 1426, 1524
BsiEI	CGRYCG	1 cut(s)	529
BsiHKAI	GWGCWC	4 cut(s)	394, 521, 1197, 1352
BsiSI	CCGG	2 cut(s)	797, 962
BslFI	GGGAC	1 cut(s)	224
BslI	CCNNNNNNNGG	4 cut(s)	272, 371, 968, 1532
BsmAI	GTCTC	1 cut(s)	1145
BsmFI	GGGAC	1 cut(s)	224
BsmI	GAATGC	3 cut(s)	848, 1077, 1380
BsnI	GGCC	8 cut(s)	363, 375, 406, 566, 972, 1318, 1426, 1524
Bsp119I	TTCGAA	1 cut(s)	988
Bsp1286I	GDGCHC	5 cut(s)	394, 521, 1177, 1197, 1352
Bsp1407I	TGTACA	1 cut(s)	462
Bsp143I	GATC	6 cut(s)	526, 595, 937, 976, 1420, 1603
Bsp19I	CCATGG	1 cut(s)	365
BspACI	CCGC	3 cut(s)	1199, 1587, 1590
BspANI	GGCC	8 cut(s)	363, 375, 406, 566, 972, 1318, 1426, 1524
BspCNI	CTCAG	2 cut(s)	310, 1408
BspFNI	CGCG	1 cut(s)	525
BspLI	GGNNCC	1 cut(s)	303
BspMAI	CTGCAG	1 cut(s)	1060
BspMI	ACCTGC	2 cut(s)	1063, 1627
BspPI	GGATC	3 cut(s)	984, 1428, 1598
BspQI	GCTCTTC	1 cut(s)	1208
BspT104I	TTCGAA	1 cut(s)	988
BsrBI	CCGCTC	1 cut(s)	1201
BsrGI	TGTACA	1 cut(s)	462
BsrI	ACTGG	2 cut(s)	647, 713
BssECI	CCNNGG	3 cut(s)	272, 365, 1626
BssMI	GATC	6 cut(s)	526, 595, 937, 976, 1420, 1603
BssSI	CACGAG	1 cut(s)	514
BssT1I	CCWWGG	2 cut(s)	365, 1626
Bst2BI	CACGAG	1 cut(s)	514
Bst2UI	CCWGG	5 cut(s)	273, 749, 974, 1190, 1491
Bst4CI	ACNGT	2 cut(s)	869, 1666
Bst6I	CTCTTC	1 cut(s)	1208
BstAUI	TGTACA	1 cut(s)	462
BstBI	TTCGAA	1 cut(s)	988
BstC8I	GCNNGC	3 cut(s)	970, 1403, 1522
BstDEI	CTNAG	8 cut(s)	72, 318, 377, 401, 678, 740, 1078, 1416
BstDSI	CCRYGG	1 cut(s)	365
BstENI	CCTNNNNNAGG	1 cut(s)	1530
BstF5I	GGATG	3 cut(s)	212, 725, 1411
BstFNI	CGCG	1 cut(s)	525
BstHHI	GCGC	1 cut(s)	923
BstKTI	GATC	6 cut(s)	529, 598, 940, 979, 1423, 1606
BstMAI	GTCTC	1 cut(s)	1145
BstMBI	GATC	6 cut(s)	526, 595, 937, 976, 1420, 1603
BstMCI	CGRYCG	1 cut(s)	529
BstMWI	GCNNNNNNNGC	1 cut(s)	77
BstNI	CCWGG	5 cut(s)	273, 749, 974, 1190, 1491
BstNSI	RCATGY	2 cut(s)	463, 1561
BstPAI	GACNNNNGTC	1 cut(s)	267
BstSCI	CCNGG	6 cut(s)	271, 747, 961, 972, 1188, 1489
BstSFI	CTRYAG	1 cut(s)	1056
BstSLI	GKGCMC	2 cut(s)	394, 1177
BstUI	CGCG	1 cut(s)	525
BstV1I	GCAGC	4 cut(s)	557, 731, 905, 1529
BstV2I	GAAGAC	1 cut(s)	267
BstX2I	RGATCY	1 cut(s)	976
BstXI	CCANNNNNNTGG	1 cut(s)	693
BstYI	RGATCY	1 cut(s)	976
Bsu36I	CCTNAGG	2 cut(s)	318, 1416
BsuI	GTATCC	1 cut(s)	793
BsuRI	GGCC	8 cut(s)	363, 375, 406, 566, 972, 1318, 1426, 1524
BtgI	CCRYGG	1 cut(s)	365
BtsCI	GGATG	3 cut(s)	212, 725, 1411
BtsI	GCAGTG	1 cut(s)	1065
BtsIMutI	CAGTG	2 cut(s)	391, 1065
BveI	ACCTGC	2 cut(s)	1063, 1627
Cac8I	GCNNGC	3 cut(s)	970, 1403, 1522
CaiI	CAGNNNCTG	1 cut(s)	1526
CfoI	GCGC	1 cut(s)	923
Cfr13I	GGNCC	6 cut(s)	362, 564, 1107, 1186, 1277, 1523
CsiI	ACCWGGT	1 cut(s)	1489
Csp6I	GTAC	6 cut(s)	87, 95, 454, 463, 578, 723
CviQI	GTAC	6 cut(s)	87, 95, 454, 463, 578, 723
DdeI	CTNAG	8 cut(s)	72, 318, 377, 401, 678, 740, 1078, 1416
DpnI	GATC	6 cut(s)	528, 597, 939, 978, 1422, 1605
DpnII	GATC	6 cut(s)	526, 595, 937, 976, 1420, 1603
DrdI	GACNNNNNNGTC	2 cut(s)	709, 770
DseDI	GACNNNNNNGTC	2 cut(s)	709, 770
EaeI	YGGCCR	2 cut(s)	970, 1424
Eam1104I	CTCTTC	1 cut(s)	1208
EarI	CTCTTC	1 cut(s)	1208
Ecl136II	GAGCTC	2 cut(s)	1195, 1350
Eco130I	CCWWGG	2 cut(s)	365, 1626
Eco147I	AGGCCT	2 cut(s)	406, 1318
Eco24I	GRGCYC	2 cut(s)	1197, 1352
Eco32I	GATATC	3 cut(s)	20, 898, 949
Eco47I	GGWCC	3 cut(s)	1107, 1186, 1277
Eco53kI	GAGCTC	2 cut(s)	1195, 1350
Eco57I	CTGAAG	1 cut(s)	984
Eco81I	CCTNAGG	2 cut(s)	318, 1416
EcoICRI	GAGCTC	2 cut(s)	1195, 1350
EcoNI	CCTNNNNNAGG	1 cut(s)	1530
EcoO109I	RGGNCCY	3 cut(s)	564, 1186, 1523
EcoRI	GAATTC	1 cut(s)	278
EcoRII	CCWGG	5 cut(s)	271, 747, 972, 1188, 1489
EcoRV	GATATC	3 cut(s)	20, 898, 949
EcoT14I	CCWWGG	2 cut(s)	365, 1626
EcoT22I	ATGCAT	2 cut(s)	313, 574
EcoT38I	GRGCYC	2 cut(s)	1197, 1352
ErhI	CCWWGG	2 cut(s)	365, 1626
FalI	AAGNNNNNCTT	2 cut(s)	1420, 1452
FaqI	GGGAC	1 cut(s)	224
FauI	CCCGC	1 cut(s)	1206
FbaI	TGATCA	1 cut(s)	595
FblI	GTMKAC	2 cut(s)	661, 1095
Fnu4HI	GCNGC	5 cut(s)	546, 745, 919, 1543, 1590
FokI	GGATG	3 cut(s)	219, 732, 1398
FriOI	GRGCYC	2 cut(s)	1197, 1352
Fsp4HI	GCNGC	5 cut(s)	546, 745, 919, 1543, 1590
FspBI	CTAG	3 cut(s)	582, 944, 1224
GlaI	GCGC	1 cut(s)	922
GluI	GCNGC	5 cut(s)	546, 745, 919, 1543, 1590
GsuI	CTGGAG	1 cut(s)	1211
HaeIII	GGCC	8 cut(s)	363, 375, 406, 566, 972, 1318, 1426, 1524
HapII	CCGG	2 cut(s)	797, 962
HhaI	GCGC	1 cut(s)	923
Hin6I	GCGC	1 cut(s)	921
HinP1I	GCGC	1 cut(s)	921
HindIII	AAGCTT	2 cut(s)	160, 1256
HinfI	GANTC	6 cut(s)	40, 107, 381, 669, 1334, 1581
HpaII	CCGG	2 cut(s)	797, 962
HphI	GGTGA	3 cut(s)	675, 829, 1576
Hpy166II	GTNNAC	9 cut(s)	60, 392, 454, 662, 780, 820, 1024, 1096, 1285
Hpy188III	TCNNGA	5 cut(s)	111, 317, 1068, 1415, 1649
Hpy8I	GTNNAC	9 cut(s)	60, 392, 454, 662, 780, 820, 1024, 1096, 1285
HpyAV	CCTTC	5 cut(s)	183, 1259, 1304, 1308, 1646
HpyCH4III	ACNGT	2 cut(s)	869, 1666
HpyCH4IV	ACGT	1 cut(s)	1375
HpyF10VI	GCNNNNNNNGC	1 cut(s)	77
HpyF3I	CTNAG	8 cut(s)	72, 318, 377, 401, 678, 740, 1078, 1416
HpySE526I	ACGT	1 cut(s)	1375
HspAI	GCGC	1 cut(s)	921
Ksp22I	TGATCA	1 cut(s)	595
Kzo9I	GATC	6 cut(s)	526, 595, 937, 976, 1420, 1603
LguI	GCTCTTC	1 cut(s)	1208
LmnI	GCTCC	3 cut(s)	614, 1192, 1200
Lsp1109I	GCAGC	4 cut(s)	557, 731, 905, 1529
LweI	GCATC	1 cut(s)	581
MabI	ACCWGGT	1 cut(s)	1489
MaeI	CTAG	3 cut(s)	582, 944, 1224
MaeII	ACGT	1 cut(s)	1375
MaeIII	GTNAC	6 cut(s)	133, 186, 638, 681, 711, 1371
MalI	GATC	6 cut(s)	528, 597, 939, 978, 1422, 1605
MbiI	CCGCTC	1 cut(s)	1201
MboI	GATC	6 cut(s)	526, 595, 937, 976, 1420, 1603
MboII	GAAGA	4 cut(s)	211, 272, 1178, 1195
MflI	RGATCY	1 cut(s)	976
MhlI	GDGCHC	5 cut(s)	394, 521, 1177, 1197, 1352
MlsI	TGGCCA	1 cut(s)	972
MluNI	TGGCCA	1 cut(s)	972
MnlI	CCTC	8 cut(s)	313, 315, 555, 617, 902, 1177, 1411, 1546
Mox20I	TGGCCA	1 cut(s)	972
Mph1103I	ATGCAT	2 cut(s)	313, 574
MscI	TGGCCA	1 cut(s)	972
MseI	TTAA	3 cut(s)	125, 228, 503
MslI	CAYNNNNRTG	2 cut(s)	718, 989
Msp20I	TGGCCA	1 cut(s)	972
MspI	CCGG	2 cut(s)	797, 962
MspR9I	CCNGG	6 cut(s)	273, 749, 963, 974, 1190, 1491
Mva1269I	GAATGC	3 cut(s)	848, 1077, 1380
MvaI	CCWGG	5 cut(s)	273, 749, 974, 1190, 1491
MvnI	CGCG	1 cut(s)	525
MwoI	GCNNNNNNNGC	1 cut(s)	77
NciI	CCSGG	1 cut(s)	963
NcoI	CCATGG	1 cut(s)	365
NdeII	GATC	6 cut(s)	526, 595, 937, 976, 1420, 1603
NlaIV	GGNNCC	1 cut(s)	303
NmuCI	GTSAC	3 cut(s)	133, 681, 711
NsiI	ATGCAT	2 cut(s)	313, 574
NspI	RCATGY	2 cut(s)	463, 1561
NspV	TTCGAA	1 cut(s)	988
PaqCI	CACCTGC	1 cut(s)	1627
PceI	AGGCCT	2 cut(s)	406, 1318
PciI	ACATGT	2 cut(s)	459, 1557
PciSI	GCTCTTC	1 cut(s)	1208
PctI	GAATGC	3 cut(s)	848, 1077, 1380
PfeI	GAWTC	6 cut(s)	40, 107, 381, 669, 1334, 1581
PflMI	CCANNNNNTGG	1 cut(s)	371
PkrI	GCNGC	5 cut(s)	547, 746, 920, 1544, 1591
Ple19I	CGATCG	1 cut(s)	529
PpuMI	RGGWCCY	1 cut(s)	1186
PscI	ACATGT	2 cut(s)	459, 1557
PshAI	GACNNNNGTC	1 cut(s)	267
PsiI	TTATAA	2 cut(s)	1448, 1670
Psp124BI	GAGCTC	2 cut(s)	1197, 1352
Psp5II	RGGWCCY	1 cut(s)	1186
Psp6I	CCWGG	5 cut(s)	271, 747, 972, 1188, 1489
PspGI	CCWGG	5 cut(s)	271, 747, 972, 1188, 1489
PspN4I	GGNNCC	1 cut(s)	303
PspPI	GGNCC	6 cut(s)	362, 564, 1107, 1186, 1277, 1523
PspPPI	RGGWCCY	1 cut(s)	1186
PstI	CTGCAG	1 cut(s)	1060
PstNI	CAGNNNCTG	1 cut(s)	1526
PsuI	RGATCY	1 cut(s)	976
PvuI	CGATCG	1 cut(s)	529
RgaI	GCGATCGC	1 cut(s)	529
RsaI	GTAC	6 cut(s)	88, 96, 455, 464, 579, 724
RsaNI	GTAC	6 cut(s)	87, 95, 454, 463, 578, 723
RseI	CAYNNNNRTG	2 cut(s)	718, 989
SacI	GAGCTC	2 cut(s)	1197, 1352
SapI	GCTCTTC	1 cut(s)	1208
SaqAI	TTAA	3 cut(s)	125, 228, 503
SatI	GCNGC	5 cut(s)	546, 745, 919, 1543, 1590
Sau3AI	GATC	6 cut(s)	526, 595, 937, 976, 1420, 1603
Sau96I	GGNCC	6 cut(s)	362, 564, 1107, 1186, 1277, 1523
ScrFI	CCNGG	6 cut(s)	273, 749, 963, 974, 1190, 1491
SduI	GDGCHC	5 cut(s)	394, 521, 1177, 1197, 1352
SexAI	ACCWGGT	1 cut(s)	1489
SfaAI	GCGATCGC	1 cut(s)	529
SfaNI	GCATC	1 cut(s)	581
SfcI	CTRYAG	1 cut(s)	1056
SfuI	TTCGAA	1 cut(s)	988
SgfI	GCGATCGC	1 cut(s)	529
SinI	GGWCC	3 cut(s)	1107, 1186, 1277
SmiMI	CAYNNNNRTG	2 cut(s)	718, 989
SseBI	AGGCCT	2 cut(s)	406, 1318
SsiI	CCGC	3 cut(s)	1199, 1587, 1590
SspI	AATATT	1 cut(s)	350
SspMI	CTAG	3 cut(s)	582, 944, 1224
SstI	GAGCTC	2 cut(s)	1197, 1352
StuI	AGGCCT	2 cut(s)	406, 1318
StyD4I	CCNGG	6 cut(s)	271, 747, 961, 972, 1188, 1489
StyI	CCWWGG	2 cut(s)	365, 1626
TaaI	ACNGT	2 cut(s)	869, 1666
TaiI	ACGT	1 cut(s)	1378
TaqI	TCGA	4 cut(s)	165, 426, 988, 1648
TatI	WGTACW	3 cut(s)	86, 453, 462
TauI	GCSGC	1 cut(s)	1592
TfiI	GAWTC	6 cut(s)	40, 107, 381, 669, 1334, 1581
Tru1I	TTAA	3 cut(s)	125, 228, 503
Tru9I	TTAA	3 cut(s)	125, 228, 503
TscAI	CASTG	2 cut(s)	391, 1065
TseFI	GTSAC	3 cut(s)	133, 681, 711
TseI	GCWGC	4 cut(s)	545, 744, 918, 1542
Tsp45I	GTSAC	3 cut(s)	133, 681, 711
TspRI	CASTG	2 cut(s)	391, 1065
Van91I	CCANNNNNTGG	1 cut(s)	371
VneI	GTGCAC	1 cut(s)	390
VpaK11BI	GGWCC	3 cut(s)	1107, 1186, 1277
XagI	CCTNNNNNAGG	1 cut(s)	1530
XapI	RAATTY	4 cut(s)	115, 253, 278, 697
XceI	RCATGY	2 cut(s)	463, 1561
XmiI	GTMKAC	2 cut(s)	661, 1095
XspI	CTAG	3 cut(s)	582, 944, 1224
Zsp2I	ATGCAT	2 cut(s)	313, 574

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.