divergent subfamily of APPLE domains
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 104, 459 |
| Acc36I | ACCTGC | 2 cut(s) | 104, 459 |
| AclWI | GGATC | 1 cut(s) | 521 |
| AcsI | RAATTY | 5 cut(s) | 475, 676, 683, 1135, 1202 |
| AcuI | CTGAAG | 2 cut(s) | 228, 1230 |
| AfaI | GTAC | 6 cut(s) | 182, 228, 719, 927, 1025, 1123 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 536 |
| AgsI | TTSAA | 3 cut(s) | 683, 760, 916 |
| AjnI | CCWGG | 4 cut(s) | 403, 788, 1058, 1092 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 450, 482 |
| AluBI | AGCT | 6 cut(s) | 294, 466, 599, 995, 1002, 1260 |
| AluI | AGCT | 6 cut(s) | 294, 466, 599, 995, 1002, 1260 |
| Alw21I | GWGCWC | 2 cut(s) | 521, 601 |
| Alw26I | GTCTC | 4 cut(s) | 191, 352, 508, 534 |
| AlwI | GGATC | 1 cut(s) | 521 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 607 |
| AoxI | GGCC | 3 cut(s) | 659, 769, 1078 |
| ApeKI | GCWGC | 3 cut(s) | 999, 1164, 1241 |
| ApoI | RAATTY | 5 cut(s) | 475, 676, 683, 1135, 1202 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1114 |
| AspA2I | CCTAGG | 1 cut(s) | 1252 |
| AspS9I | GGNCC | 2 cut(s) | 312, 1078 |
| AsuC2I | CCSGG | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 2 cut(s) | 161, 1198 |
| AvaII | GGWCC | 1 cut(s) | 312 |
| AvrII | CCTAGG | 1 cut(s) | 1252 |
| BanII | GRGCYC | 1 cut(s) | 601 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 149, 181 |
| BbsI | GAAGAC | 1 cut(s) | 989 |
| Bbv12I | GWGCWC | 2 cut(s) | 521, 601 |
| BbvI | GCAGC | 3 cut(s) | 1011, 1151, 1228 |
| BccI | CCATC | 4 cut(s) | 86, 380, 550, 1004 |
| BceAI | ACGGC | 2 cut(s) | 646, 1250 |
| BciT130I | CCWGG | 4 cut(s) | 405, 790, 1060, 1094 |
| BciVI | GTATCC | 1 cut(s) | 553 |
| BclI | TGATCA | 1 cut(s) | 265 |
| BcnI | CCSGG | 1 cut(s) | 147 |
| BcoDI | GTCTC | 4 cut(s) | 191, 352, 508, 534 |
| BfaI | CTAG | 4 cut(s) | 59, 612, 876, 1253 |
| BfmI | CTRYAG | 2 cut(s) | 333, 1005 |
| BfuAI | ACCTGC | 2 cut(s) | 104, 459 |
| BfuI | GTATCC | 1 cut(s) | 553 |
| BisI | GCNGC | 3 cut(s) | 1000, 1165, 1242 |
| BlnI | CCTAGG | 1 cut(s) | 1252 |
| BlsI | GCNGC | 3 cut(s) | 1001, 1166, 1243 |
| Bme1390I | CCNGG | 5 cut(s) | 147, 405, 790, 1060, 1094 |
| Bme18I | GGWCC | 1 cut(s) | 312 |
| BmgT120I | GGNCC | 2 cut(s) | 312, 1078 |
| BmiI | GGNNCC | 2 cut(s) | 816, 1184 |
| BmrFI | CCNGG | 5 cut(s) | 147, 405, 790, 1060, 1094 |
| BmrI | ACTGGG | 1 cut(s) | 140 |
| BmuI | ACTGGG | 1 cut(s) | 140 |
| BpiI | GAAGAC | 1 cut(s) | 989 |
| BpuEI | CTTGAG | 2 cut(s) | 519, 1103 |
| BpuMI | CCSGG | 1 cut(s) | 147 |
| BsaJI | CCNNGG | 2 cut(s) | 1093, 1252 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 264, 294 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 536 |
| Bse1I | ACTGG | 5 cut(s) | 135, 344, 490, 649, 668 |
| BseBI | CCWGG | 4 cut(s) | 405, 790, 1060, 1094 |
| BseDI | CCNNGG | 2 cut(s) | 1093, 1252 |
| BseGI | GGATG | 3 cut(s) | 561, 827, 977 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 536 |
| BseMII | CTCAG | 3 cut(s) | 186, 614, 957 |
| BseNI | ACTGG | 5 cut(s) | 135, 344, 490, 649, 668 |
| BseRI | GAGGAG | 1 cut(s) | 529 |
| BseXI | GCAGC | 3 cut(s) | 1011, 1151, 1228 |
| BshFI | GGCC | 3 cut(s) | 661, 771, 1080 |
| BsiHKAI | GWGCWC | 2 cut(s) | 521, 601 |
| BsiSI | CCGG | 1 cut(s) | 147 |
| BslFI | GGGAC | 2 cut(s) | 129, 634 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 536 |
| BsmAI | GTCTC | 4 cut(s) | 191, 352, 508, 534 |
| BsmFI | GGGAC | 2 cut(s) | 129, 634 |
| BsmI | GAATGC | 1 cut(s) | 1094 |
| BsnI | GGCC | 3 cut(s) | 661, 771, 1080 |
| Bsp1286I | GDGCHC | 2 cut(s) | 521, 601 |
| Bsp143I | GATC | 3 cut(s) | 265, 526, 838 |
| BspANI | GGCC | 3 cut(s) | 661, 771, 1080 |
| BspCNI | CTCAG | 3 cut(s) | 187, 613, 958 |
| BspLI | GGNNCC | 2 cut(s) | 816, 1184 |
| BspMAI | CTGCAG | 2 cut(s) | 337, 1009 |
| BspMI | ACCTGC | 2 cut(s) | 104, 459 |
| BspPI | GGATC | 1 cut(s) | 521 |
| BsrI | ACTGG | 5 cut(s) | 135, 344, 490, 649, 668 |
| BssECI | CCNNGG | 2 cut(s) | 1093, 1252 |
| BssMI | GATC | 3 cut(s) | 265, 526, 838 |
| BssT1I | CCWWGG | 1 cut(s) | 1252 |
| Bst2UI | CCWGG | 4 cut(s) | 405, 790, 1060, 1094 |
| Bst4CI | ACNGT | 5 cut(s) | 202, 307, 780, 1028, 1115 |
| BstC8I | GCNNGC | 3 cut(s) | 997, 1169, 1239 |
| BstDEI | CTNAG | 5 cut(s) | 41, 195, 600, 696, 966 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 534 |
| BstF5I | GGATG | 3 cut(s) | 561, 827, 977 |
| BstKTI | GATC | 3 cut(s) | 268, 529, 841 |
| BstMAI | GTCTC | 4 cut(s) | 191, 352, 508, 534 |
| BstMBI | GATC | 3 cut(s) | 265, 526, 838 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 300 |
| BstNI | CCWGG | 4 cut(s) | 405, 790, 1060, 1094 |
| BstNSI | RCATGY | 1 cut(s) | 1131 |
| BstSCI | CCNGG | 5 cut(s) | 145, 403, 788, 1058, 1092 |
| BstSFI | CTRYAG | 2 cut(s) | 333, 1005 |
| BstV1I | GCAGC | 3 cut(s) | 1011, 1151, 1228 |
| BstV2I | GAAGAC | 1 cut(s) | 989 |
| BstX2I | RGATCY | 1 cut(s) | 526 |
| BstYI | RGATCY | 1 cut(s) | 526 |
| BsuI | GTATCC | 1 cut(s) | 553 |
| BsuRI | GGCC | 3 cut(s) | 661, 771, 1080 |
| BtsCI | GGATG | 3 cut(s) | 561, 827, 977 |
| BtsIMutI | CAGTG | 5 cut(s) | 207, 261, 303, 785, 848 |
| BveI | ACCTGC | 2 cut(s) | 104, 459 |
| Cac8I | GCNNGC | 3 cut(s) | 997, 1169, 1239 |
| CaiI | CAGNNNCTG | 1 cut(s) | 607 |
| Cfr13I | GGNCC | 2 cut(s) | 312, 1078 |
| Csp6I | GTAC | 6 cut(s) | 181, 227, 718, 926, 1024, 1122 |
| CviAII | CATG | 5 cut(s) | 624, 909, 1075, 1119, 1128 |
| CviQI | GTAC | 6 cut(s) | 181, 227, 718, 926, 1024, 1122 |
| DdeI | CTNAG | 5 cut(s) | 41, 195, 600, 696, 966 |
| DpnI | GATC | 3 cut(s) | 267, 528, 840 |
| DpnII | GATC | 3 cut(s) | 265, 526, 838 |
| DraI | TTTAAA | 2 cut(s) | 255, 1036 |
| Ecl136II | GAGCTC | 1 cut(s) | 599 |
| Eco130I | CCWWGG | 1 cut(s) | 1252 |
| Eco24I | GRGCYC | 1 cut(s) | 601 |
| Eco32I | GATATC | 1 cut(s) | 650 |
| Eco47I | GGWCC | 1 cut(s) | 312 |
| Eco53kI | GAGCTC | 1 cut(s) | 599 |
| Eco57I | CTGAAG | 2 cut(s) | 228, 1230 |
| EcoICRI | GAGCTC | 1 cut(s) | 599 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 534 |
| EcoRI | GAATTC | 1 cut(s) | 1202 |
| EcoRII | CCWGG | 4 cut(s) | 403, 788, 1058, 1092 |
| EcoRV | GATATC | 1 cut(s) | 650 |
| EcoT14I | CCWWGG | 1 cut(s) | 1252 |
| EcoT38I | GRGCYC | 1 cut(s) | 601 |
| ErhI | CCWWGG | 1 cut(s) | 1252 |
| FaeI | CATG | 5 cut(s) | 627, 912, 1078, 1122, 1131 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 216, 248 |
| FaqI | GGGAC | 2 cut(s) | 129, 634 |
| FatI | CATG | 5 cut(s) | 623, 908, 1074, 1118, 1127 |
| FbaI | TGATCA | 1 cut(s) | 265 |
| Fnu4HI | GCNGC | 3 cut(s) | 1000, 1165, 1242 |
| FokI | GGATG | 3 cut(s) | 568, 814, 984 |
| FriOI | GRGCYC | 1 cut(s) | 601 |
| Fsp4HI | GCNGC | 3 cut(s) | 1000, 1165, 1242 |
| FspBI | CTAG | 4 cut(s) | 59, 612, 876, 1253 |
| GluI | GCNGC | 3 cut(s) | 1000, 1165, 1242 |
| HaeIII | GGCC | 3 cut(s) | 661, 771, 1080 |
| HapII | CCGG | 1 cut(s) | 147 |
| Hin1II | CATG | 5 cut(s) | 627, 912, 1078, 1122, 1131 |
| HincII | GTYRAC | 1 cut(s) | 693 |
| HindII | GTYRAC | 1 cut(s) | 693 |
| HindIII | AAGCTT | 1 cut(s) | 464 |
| HinfI | GANTC | 6 cut(s) | 62, 135, 239, 340, 362, 985 |
| HpaII | CCGG | 1 cut(s) | 147 |
| HphI | GGTGA | 2 cut(s) | 161, 1198 |
| Hpy166II | GTNNAC | 4 cut(s) | 183, 693, 720, 786 |
| Hpy188I | TCNGA | 6 cut(s) | 603, 939, 967, 981, 1213, 1249 |
| Hpy188III | TCNNGA | 5 cut(s) | 246, 327, 366, 899, 1220 |
| Hpy8I | GTNNAC | 4 cut(s) | 183, 693, 720, 786 |
| HpyAV | CCTTC | 6 cut(s) | 46, 151, 293, 586, 651, 1145 |
| HpyCH4III | ACNGT | 5 cut(s) | 202, 307, 780, 1028, 1115 |
| HpyCH4V | TGCA | 6 cut(s) | 335, 776, 999, 1007, 1127, 1133 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 300 |
| HpyF3I | CTNAG | 5 cut(s) | 41, 195, 600, 696, 966 |
| Hsp92II | CATG | 5 cut(s) | 627, 912, 1078, 1122, 1131 |
| Ksp22I | TGATCA | 1 cut(s) | 265 |
| Kzo9I | GATC | 3 cut(s) | 265, 526, 838 |
| LmnI | GCTCC | 2 cut(s) | 516, 596 |
| Lsp1109I | GCAGC | 3 cut(s) | 1011, 1151, 1228 |
| MaeI | CTAG | 4 cut(s) | 59, 612, 876, 1253 |
| MaeIII | GTNAC | 4 cut(s) | 259, 407, 481, 1028 |
| MalI | GATC | 3 cut(s) | 267, 528, 840 |
| MboI | GATC | 3 cut(s) | 265, 526, 838 |
| MboII | GAAGA | 6 cut(s) | 234, 536, 759, 994, 1044, 1047 |
| MflI | RGATCY | 1 cut(s) | 526 |
| MhlI | GDGCHC | 2 cut(s) | 521, 601 |
| MluCI | AATT | 8 cut(s) | 80, 475, 676, 683, 850, 958, 1135, 1202 |
| MlyI | GAGTC | 2 cut(s) | 56, 979 |
| MmeI | TCCRAC | 4 cut(s) | 98, 342, 452, 616 |
| MnlI | CCTC | 9 cut(s) | 58, 113, 325, 507, 961, 1078, 1196, 1219, 1235 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1114 |
| MseI | TTAA | 4 cut(s) | 87, 254, 641, 1035 |
| MspI | CCGG | 1 cut(s) | 147 |
| MspR9I | CCNGG | 5 cut(s) | 147, 405, 790, 1060, 1094 |
| Mva1269I | GAATGC | 1 cut(s) | 1094 |
| MvaI | CCWGG | 4 cut(s) | 405, 790, 1060, 1094 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 300 |
| NciI | CCSGG | 1 cut(s) | 147 |
| NdeII | GATC | 3 cut(s) | 265, 526, 838 |
| NlaIII | CATG | 5 cut(s) | 627, 912, 1078, 1122, 1131 |
| NlaIV | GGNNCC | 2 cut(s) | 816, 1184 |
| NmuCI | GTSAC | 1 cut(s) | 259 |
| NspI | RCATGY | 1 cut(s) | 1131 |
| PaqCI | CACCTGC | 2 cut(s) | 104, 459 |
| PctI | GAATGC | 1 cut(s) | 1094 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1114 |
| PfeI | GAWTC | 4 cut(s) | 135, 239, 340, 362 |
| PkrI | GCNGC | 3 cut(s) | 1001, 1166, 1243 |
| PleI | GAGTC | 2 cut(s) | 56, 979 |
| PpsI | GAGTC | 2 cut(s) | 56, 979 |
| Psp124BI | GAGCTC | 1 cut(s) | 601 |
| Psp6I | CCWGG | 4 cut(s) | 403, 788, 1058, 1092 |
| PspGI | CCWGG | 4 cut(s) | 403, 788, 1058, 1092 |
| PspN4I | GGNNCC | 2 cut(s) | 816, 1184 |
| PspPI | GGNCC | 2 cut(s) | 312, 1078 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 37, 69 |
| PstI | CTGCAG | 2 cut(s) | 337, 1009 |
| PstNI | CAGNNNCTG | 1 cut(s) | 607 |
| PsuI | RGATCY | 1 cut(s) | 526 |
| RsaI | GTAC | 6 cut(s) | 182, 228, 719, 927, 1025, 1123 |
| RsaNI | GTAC | 6 cut(s) | 181, 227, 718, 926, 1024, 1122 |
| SacI | GAGCTC | 1 cut(s) | 601 |
| SaqAI | TTAA | 4 cut(s) | 87, 254, 641, 1035 |
| SatI | GCNGC | 3 cut(s) | 1000, 1165, 1242 |
| Sau3AI | GATC | 3 cut(s) | 265, 526, 838 |
| Sau96I | GGNCC | 2 cut(s) | 312, 1078 |
| SchI | GAGTC | 2 cut(s) | 56, 979 |
| ScrFI | CCNGG | 5 cut(s) | 147, 405, 790, 1060, 1094 |
| SduI | GDGCHC | 2 cut(s) | 521, 601 |
| SfcI | CTRYAG | 2 cut(s) | 333, 1005 |
| SinI | GGWCC | 1 cut(s) | 312 |
| SmlI | CTYRAG | 2 cut(s) | 534, 1082 |
| SmoI | CTYRAG | 2 cut(s) | 534, 1082 |
| Sse9I | AATT | 8 cut(s) | 80, 475, 676, 683, 850, 958, 1135, 1202 |
| SspI | AATATT | 1 cut(s) | 741 |
| SspMI | CTAG | 4 cut(s) | 59, 612, 876, 1253 |
| SstI | GAGCTC | 1 cut(s) | 601 |
| StyD4I | CCNGG | 5 cut(s) | 145, 403, 788, 1058, 1092 |
| StyI | CCWWGG | 1 cut(s) | 1252 |
| TaaI | ACNGT | 5 cut(s) | 202, 307, 780, 1028, 1115 |
| TaqI | TCGA | 1 cut(s) | 326 |
| TasI | AATT | 8 cut(s) | 80, 475, 676, 683, 850, 958, 1135, 1202 |
| TatI | WGTACW | 3 cut(s) | 717, 1023, 1121 |
| TfiI | GAWTC | 4 cut(s) | 135, 239, 340, 362 |
| Tru1I | TTAA | 4 cut(s) | 87, 254, 641, 1035 |
| Tru9I | TTAA | 4 cut(s) | 87, 254, 641, 1035 |
| TscAI | CASTG | 5 cut(s) | 207, 268, 310, 785, 848 |
| TseFI | GTSAC | 1 cut(s) | 259 |
| TseI | GCWGC | 3 cut(s) | 999, 1164, 1241 |
| Tsp45I | GTSAC | 1 cut(s) | 259 |
| TspDTI | ATGAA | 7 cut(s) | 17, 141, 476, 605, 717, 897, 1107 |
| TspGWI | ACGGA | 1 cut(s) | 568 |
| TspRI | CASTG | 5 cut(s) | 207, 268, 310, 785, 848 |
| VpaK11BI | GGWCC | 1 cut(s) | 312 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 534 |
| XapI | RAATTY | 5 cut(s) | 475, 676, 683, 1135, 1202 |
| XceI | RCATGY | 1 cut(s) | 1131 |
| XmaJI | CCTAGG | 1 cut(s) | 1252 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1114 |
| XspI | CTAG | 4 cut(s) | 59, 612, 876, 1253 |