FvH4_3g21400

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000207
Physical Location & Seq
Forward (+)
14488129 .. 14491670
3542 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g21400.t2

Sequence Viewer

Length: 2442 bp
ATGAACAACCTTTGCTTCATTCTTCTCTGCGTCTGTTTCAGTAAACTTTCATCTGCAGCTGATACCCTTTCTTCATCTCAGAACATCACTGATGGCAACTCCTCCTTGGTTTCCCCAGGTGGAGTGTTTGAACTGGGTTTCTTCACCCCAGGCCTTTCCAAATCCCGCTACTTGGGGATTTGGTACAAGAACATCCCAGTCAAAACCGTCGTTTGGGTTGCGAATCGAGGCGCCCCGATCAACGACTCCTCAGGCCATTTGATGATCAACACCACCACAGGGACTCTAGTTCTTCTCAACAAGAACAAGACAGTTTTTTGGTCATCAAATTCGACCAAACAGACCCAGAATATTAGTCCTGTTGTTCAGTTATTAGACAATGGCAATCTCATCCTCAGAGACGAGAAAGAAGGAGCCAACGCCGGCAACTATCTGTGGCAAAGCTTTGACTATCCGTCGGATACTTTGTTACCGGGGATGAAGCTGGGTTGGGACTTGAGAACCAGGCTTAACCGGAAACTAACTGCGTGGAAGAGTCCAGATGACCCTTCTCCTGGAGACTTCACATGGGAGTTGCAGCTGCATAACTACCCTGAGCCAGCTATGTTCAGAGACGGCAAAGTGTTTCTGCGGAGCGGTCCGTGGAATGGTGTTTTATTCAGCGGAAAACCGGCAAAGGCGCTACCGGCTTTGAACTTCAGCTTTGTCATGGATGAGAATGAGGTTTACACGACGATTGGAATGGTGAACAATTCAGCATTAGAGAGGATGATGTTGAATTTAACGGCTGACTACAACCGCCAGTCGTGGATTTGGTCTGAAGCAGACCGAAATTGGACACTCTATGCAGCATTTCCTAGGGACCCTTGTGACAGTTATGGCAAGTGTGGAGGGAATGGAAACTGTGAGCTTACTGCGTCCCCTTTGTGTCAATGCTTAGACAGATTCAAGCCTAGATCAGTGGAGAAGTGGAGCTTAAACAACTTTTCGCTTGGGTGTAAGCGAAAGACGCCACTGACGTGCAAGAATGATGGATTTGTGACATATCCCGGGTTGAAATTGCCGGATACAACGCATACTTGGATTGATAAAGCTATGAATCTCAAGGAGTGCAGGGCCAAATGCTTGTCTAATTGTTCATGTTCAGCGTACACAAACTTGGATGTTAGAGGAGGAGGTAGTGGTTGTGCAATCTGGTTTGATGATCTCGTAGACTTGAAGCAGATTCCAGGTGGTGACCAGGATATTTATATTAAGATCTCTGGTGCCGAACTAGGAGGAAAAGATGAGAAGTGGAAGATAGGAGTGATAGTTGCATCTGCTGTTGTCGTAATTCTCGCAATAATTTTATTTGGCTATTGTTACATTCTCAGACTCAGACACAGGAAAAGATTCAAAGGTACTCAAAACAACATTGAAGAGCAGAAGGAAGAAGACCTGGAACTACCATTGTTCGACTTGTCAACAATAGAGACTGCTACAAATAATTTTTCAATCAATAATAAACTTGGAGAAGGTGGTTTTGGACCTGTGTACAAGGGTACACTAATAGATGGAAAAGAAATTGCAGTGAAGAGGCTTTCAAAAAGTTCTGGACAAGGAATGAAAGAGTTCAAAAATGAAGTAATACTGATTGCAAAACTTCAGCACCGAAATCTTGTAAAGCTTCTTGGTTGTTGCATTCAGGGAATGGAGAAATTGCTAATATATGAATACATGCCCAATAAGAGTTTGGATTCCTTCATTTTTGATGAAGTACGAAGAAAATTGTTAGACTGGCATAAGCGCTTCAACATTATCTGCGGTATTGCTAGGGGGCTTCTCTATCTTCATCAAGATTCACGATTGAGGATTATACACAGAGATCTAAAAGCAAGCAATGTGTTGCTTGATCGCGAGATGAACCCCAAAATCTCAGATTTTGGTCTTGCTAGAACTTTTGGCGGTGACCAAACTGAAGGAAACACAAACAGAGTTGTTGGAACATATGGTTATATGGCTCCTGAATATGCCATTGAAGGGCAGTTCTCAGTAAAATCCGATGTCTTTAGCTTTGGTATCTTAATGCTGGAGATAATAAGTGGAAAGAAAAGTAAAGGGTTCTATCACTTGAACCACAATCTTAATCTTATTGGAAATGCATGGAGGTTATGGAATGGAGGACGACCATTAGAACTGATAGATGAAGGGTTCGGTGAGTCATGCAACTTATCAGAGGTGTTGCGATGCATCCATGTCAGTCTCTTGTGTGTACAACAACAGCCGGAGGACAGGCCGACCATGTCAGCAGTAGTTCAGATGTTATGTAGTGAAAGTGCCTTGCCTCAGCCTAAAGAACCAGGATTCTTTTCAGAGAAAGATTTGGTTGAAGGAGGCTTTCCCTTTCTTAACAACGAAACGTCTTCTAATGGATTGACCATTACCCTACTTGAGGCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

814

Amino Acids

90.94

Weight (kDa)

8.18

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 5 - 91 1.3e-26 D-mannose binding lectin
S_locus_glycop PF00954 124 - 232 6e-22 S-locus glycoprotein domain
PAN_2 PF08276 254 - 319 4.5e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 411 - 681 5e-50 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 411 - 679 7.1e-45 Protein kinase domain
DUF3403 PF11883 684 - 726 7.2e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 230, 1265
AccBSI CCGCTC 1 cut(s) 636
AccI GTMKAC 1 cut(s) 1212
AccII CGCG 1 cut(s) 1896
AciI CCGC 7 cut(s) 166, 631, 636, 663, 799, 1803, 1944
AcsI RAATTY 2 cut(s) 328, 778
AcuI CTGAAG 4 cut(s) 682, 840, 1628, 1977
AcyI GRCGYC 2 cut(s) 231, 1010
AfaI GTAC 7 cut(s) 185, 1151, 1402, 1535, 1543, 1758, 2253
AfeI AGCGCT 1 cut(s) 1787
AfiI CCNNNNNNNGG 7 cut(s) 172, 213, 279, 554, 647, 2019, 2431
AhdI GACNNNNNGTC 1 cut(s) 454
AjiI CACGTC 1 cut(s) 1020
AjnI CCWGG 8 cut(s) 115, 148, 503, 553, 1228, 1239, 1437, 2338
AjuI GAANNNNNNNTTGG 2 cut(s) 1506, 1538
AleI CACNNNNGTG 1 cut(s) 1018
Alw26I GTCTC 5 cut(s) 393, 552, 606, 1466, 2246
Ama87I CYCGRG 1 cut(s) 1049
Aor51HI AGCGCT 1 cut(s) 1787
AoxI GGCC 4 cut(s) 151, 253, 1116, 2273
ApeKI GCWGC 4 cut(s) 56, 577, 580, 848
ApoI RAATTY 2 cut(s) 328, 778
Asp700I GAANNNNTTC 2 cut(s) 1391, 1610
AspA2I CCTAGG 1 cut(s) 857
AspLEI GCGC 3 cut(s) 233, 682, 1788
AspS9I GGNCC 4 cut(s) 638, 862, 1116, 1526
AsuC2I CCSGG 3 cut(s) 474, 1050, 1051
AsuHPI GGTGA 5 cut(s) 136, 757, 1247, 1958, 2207
AvaI CYCGRG 1 cut(s) 1049
AvaII GGWCC 3 cut(s) 638, 862, 1526
AvrII CCTAGG 1 cut(s) 857
AxyI CCTNAGG 1 cut(s) 250
BanI GGYRCC 2 cut(s) 230, 1265
BbsI GAAGAC 2 cut(s) 1440, 2394
BbvCI CCTCAGC 1 cut(s) 2325
BbvI GCAGC 4 cut(s) 68, 567, 589, 860
BccI CCATC 3 cut(s) 86, 1025, 1547
BceAI ACGGC 2 cut(s) 631, 801
BciT130I CCWGG 8 cut(s) 117, 150, 505, 555, 1230, 1241, 1439, 2340
BciVI GTATCC 2 cut(s) 454, 1060
BclI TGATCA 1 cut(s) 264
BcnI CCSGG 3 cut(s) 474, 1050, 1051
BcoDI GTCTC 5 cut(s) 393, 552, 606, 1466, 2246
BfaI CTAG 6 cut(s) 287, 858, 954, 1274, 1812, 1932
BfmI CTRYAG 1 cut(s) 54
BfoI RGCGCY 3 cut(s) 234, 683, 1789
BfuI GTATCC 2 cut(s) 454, 1060
BglII AGATCT 2 cut(s) 1257, 1864
BisI GCNGC 4 cut(s) 57, 578, 581, 849
BlnI CCTAGG 1 cut(s) 857
BlsI GCNGC 4 cut(s) 58, 579, 582, 850
Bme18I GGWCC 3 cut(s) 638, 862, 1526
BmeRI GACNNNNNGTC 1 cut(s) 454
BmeT110I CYCGRG 1 cut(s) 1049
BmgBI CACGTC 1 cut(s) 1020
BmgT120I GGNCC 4 cut(s) 638, 862, 1116, 1526
BmiI GGNNCC 6 cut(s) 232, 415, 863, 864, 1267, 2001
BmrI ACTGGG 2 cut(s) 143, 191
BmsI GCATC 3 cut(s) 1325, 2216, 2238
BmuI ACTGGG 2 cut(s) 143, 191
BpiI GAAGAC 2 cut(s) 1440, 2394
BpmI CTGGAG 2 cut(s) 576, 2090
Bpu10I CCTNAGC 2 cut(s) 594, 2325
BpuEI CTTGAG 2 cut(s) 517, 1088
BpuMI CCSGG 3 cut(s) 474, 1050, 1051
BsaHI GRCGYC 2 cut(s) 231, 1010
BsaJI CCNNGG 7 cut(s) 105, 115, 148, 473, 641, 857, 1049
BsaWI WCCGGW 1 cut(s) 513
BsaXI ACNNNNNCTCC 2 cut(s) 1296, 1326
Bsc4I CCNNNNNNNGG 7 cut(s) 172, 213, 279, 554, 647, 2019, 2431
Bse118I RCCGGY 3 cut(s) 422, 670, 685
Bse1I ACTGG 4 cut(s) 138, 197, 802, 1781
Bse21I CCTNAGG 1 cut(s) 250
Bse3DI GCAATG 1 cut(s) 1885
BseBI CCWGG 8 cut(s) 117, 150, 505, 555, 1230, 1241, 1439, 2340
BseDI CCNNGG 7 cut(s) 105, 115, 148, 473, 641, 857, 1049
BseGI GGATG 7 cut(s) 192, 390, 483, 718, 774, 1168, 2229
BseLI CCNNNNNNNGG 7 cut(s) 172, 213, 279, 554, 647, 2019, 2431
BseMI GCAATG 1 cut(s) 1885
BseMII CTCAG 9 cut(s) 92, 264, 409, 585, 1384, 1390, 1929, 2043, 2339
BseNI ACTGG 4 cut(s) 138, 197, 802, 1781
BseRI GAGGAG 4 cut(s) 91, 238, 1185, 1188
BseXI GCAGC 4 cut(s) 68, 567, 589, 860
BseYI CCCAGC 1 cut(s) 484
BsgI GTGCAG 1 cut(s) 1132
Bsh1236I CGCG 1 cut(s) 1896
BshFI GGCC 4 cut(s) 153, 255, 1118, 2275
BshNI GGYRCC 2 cut(s) 230, 1265
BsiHKCI CYCGRG 1 cut(s) 1049
BsiSI CCGG 8 cut(s) 423, 473, 514, 671, 686, 1050, 1064, 2264
BslFI GGGAC 4 cut(s) 295, 506, 875, 904
BslI CCNNNNNNNGG 7 cut(s) 172, 213, 279, 554, 647, 2019, 2431
BsmAI GTCTC 5 cut(s) 393, 552, 606, 1466, 2246
BsmBI CGTCTC 2 cut(s) 393, 606
BsmFI GGGAC 4 cut(s) 295, 506, 875, 904
BsmI GAATGC 1 cut(s) 1680
BsnI GGCC 4 cut(s) 153, 255, 1118, 2275
BsoBI CYCGRG 1 cut(s) 1049
Bsp1407I TGTACA 2 cut(s) 1533, 2251
Bsp143I GATC 7 cut(s) 237, 264, 956, 1204, 1257, 1864, 1891
Bsp68I TCGCGA 1 cut(s) 1896
BspACI CCGC 7 cut(s) 166, 631, 636, 663, 799, 1803, 1944
BspANI GGCC 4 cut(s) 153, 255, 1118, 2275
BspCNI CTCAG 9 cut(s) 91, 263, 408, 586, 1383, 1389, 1928, 2042, 2338
BspFNI CGCG 1 cut(s) 1896
BspLI GGNNCC 6 cut(s) 232, 415, 863, 864, 1267, 2001
BspMAI CTGCAG 1 cut(s) 58
BspQI GCTCTTC 1 cut(s) 1413
BspT107I GGYRCC 2 cut(s) 230, 1265
BsrBI CCGCTC 1 cut(s) 636
BsrDI GCAATG 1 cut(s) 1885
BsrFI RCCGGY 3 cut(s) 422, 670, 685
BsrGI TGTACA 2 cut(s) 1533, 2251
BsrI ACTGG 4 cut(s) 138, 197, 802, 1781
BssAI RCCGGY 3 cut(s) 422, 670, 685
BssECI CCNNGG 7 cut(s) 105, 115, 148, 473, 641, 857, 1049
BssMI GATC 7 cut(s) 237, 264, 956, 1204, 1257, 1864, 1891
BssNI GRCGYC 2 cut(s) 231, 1010
BssT1I CCWWGG 2 cut(s) 105, 857
Bst2UI CCWGG 8 cut(s) 117, 150, 505, 555, 1230, 1241, 1439, 2340
Bst4CI ACNGT 4 cut(s) 208, 313, 875, 905
Bst6I CTCTTC 3 cut(s) 527, 1413, 1568
BstACI GRCGYC 2 cut(s) 231, 1010
BstAUI TGTACA 2 cut(s) 1533, 2251
BstC8I GCNNGC 3 cut(s) 424, 600, 1876
BstDSI CCRYGG 1 cut(s) 641
BstEII GGTNACC 2 cut(s) 1235, 1946
BstENI CCTNNNNNAGG 1 cut(s) 2429
BstF5I GGATG 7 cut(s) 192, 390, 483, 718, 774, 1168, 2229
BstFNI CGCG 1 cut(s) 1896
BstH2I RGCGCY 3 cut(s) 234, 683, 1789
BstHHI GCGC 3 cut(s) 233, 682, 1788
BstKTI GATC 7 cut(s) 240, 267, 959, 1207, 1260, 1867, 1894
BstMAI GTCTC 5 cut(s) 393, 552, 606, 1466, 2246
BstMBI GATC 7 cut(s) 237, 264, 956, 1204, 1257, 1864, 1891
BstMWI GCNNNNNNNGC 2 cut(s) 686, 1009
BstNI CCWGG 8 cut(s) 117, 150, 505, 555, 1230, 1241, 1439, 2340
BstNSI RCATGY 1 cut(s) 1720
BstPI GGTNACC 2 cut(s) 1235, 1946
BstSFI CTRYAG 1 cut(s) 54
BstUI CGCG 1 cut(s) 1896
BstV1I GCAGC 4 cut(s) 68, 567, 589, 860
BstV2I GAAGAC 2 cut(s) 1440, 2394
BstX2I RGATCY 2 cut(s) 1257, 1864
BstYI RGATCY 2 cut(s) 1257, 1864
Bsu36I CCTNAGG 1 cut(s) 250
BsuI GTATCC 2 cut(s) 454, 1060
BsuRI GGCC 4 cut(s) 153, 255, 1118, 2275
BtgI CCRYGG 1 cut(s) 641
BtgZI GCGATG 1 cut(s) 2239
BtrI CACGTC 1 cut(s) 1020
BtsCI GGATG 7 cut(s) 192, 390, 483, 718, 774, 1168, 2229
BtsI GCAGTG 1 cut(s) 1575
BtsIMutI CAGTG 4 cut(s) 87, 966, 1013, 1575
BtuMI TCGCGA 1 cut(s) 1896
Cac8I GCNNGC 3 cut(s) 424, 600, 1876
CfoI GCGC 3 cut(s) 233, 682, 1788
Cfr10I RCCGGY 3 cut(s) 422, 670, 685
Cfr13I GGNCC 4 cut(s) 638, 862, 1116, 1526
Cfr9I CCCGGG 1 cut(s) 1049
CpoI CGGWCCG 1 cut(s) 638
CseI GACGC 3 cut(s) 19, 906, 1018
Csp6I GTAC 7 cut(s) 184, 1150, 1401, 1534, 1542, 1757, 2252
CspI CGGWCCG 1 cut(s) 638
CviAII CATG 8 cut(s) 567, 709, 1140, 1717, 2142, 2202, 2234, 2281
CviQI GTAC 7 cut(s) 184, 1150, 1401, 1534, 1542, 1757, 2252
DinI GGCGCC 1 cut(s) 232
DpnI GATC 7 cut(s) 239, 266, 958, 1206, 1259, 1866, 1893
DpnII GATC 7 cut(s) 237, 264, 956, 1204, 1257, 1864, 1891
DriI GACNNNNNGTC 1 cut(s) 454
Eam1104I CTCTTC 3 cut(s) 527, 1413, 1568
Eam1105I GACNNNNNGTC 1 cut(s) 454
EarI CTCTTC 3 cut(s) 527, 1413, 1568
Eco130I CCWWGG 2 cut(s) 105, 857
Eco147I AGGCCT 1 cut(s) 153
Eco47I GGWCC 3 cut(s) 638, 862, 1526
Eco47III AGCGCT 1 cut(s) 1787
Eco57I CTGAAG 4 cut(s) 682, 840, 1628, 1977
Eco81I CCTNAGG 1 cut(s) 250
Eco88I CYCGRG 1 cut(s) 1049
Eco91I GGTNACC 2 cut(s) 1235, 1946
EcoNI CCTNNNNNAGG 1 cut(s) 2429
EcoO109I RGGNCCY 1 cut(s) 862
EcoO65I GGTNACC 2 cut(s) 1235, 1946
EcoRII CCWGG 8 cut(s) 115, 148, 503, 553, 1228, 1239, 1437, 2338
EcoT14I CCWWGG 2 cut(s) 105, 857
EcoT22I ATGCAT 2 cut(s) 2143, 2231
EgeI GGCGCC 1 cut(s) 232
EheI GGCGCC 1 cut(s) 232
ErhI CCWWGG 2 cut(s) 105, 857
Esp3I CGTCTC 2 cut(s) 393, 606
FaeI CATG 8 cut(s) 570, 712, 1143, 1720, 2145, 2205, 2237, 2284
FalI AAGNNNNNCTT 2 cut(s) 959, 991
FaqI GGGAC 4 cut(s) 295, 506, 875, 904
FatI CATG 8 cut(s) 566, 708, 1139, 1716, 2141, 2201, 2233, 2280
FauI CCCGC 1 cut(s) 173
FauNDI CATATG 1 cut(s) 1987
FbaI TGATCA 1 cut(s) 264
FblI GTMKAC 1 cut(s) 1212
Fnu4HI GCNGC 4 cut(s) 57, 578, 581, 849
FokI GGATG 7 cut(s) 179, 377, 490, 725, 781, 1175, 2216
Fsp4HI GCNGC 4 cut(s) 57, 578, 581, 849
FspBI CTAG 6 cut(s) 287, 858, 954, 1274, 1812, 1932
GlaI GCGC 3 cut(s) 232, 681, 1787
GluI GCNGC 4 cut(s) 57, 578, 581, 849
GsaI CCCAGC 1 cut(s) 488
GsuI CTGGAG 2 cut(s) 576, 2090
HaeII RGCGCY 3 cut(s) 234, 683, 1789
HaeIII GGCC 4 cut(s) 153, 255, 1118, 2275
HapII CCGG 8 cut(s) 423, 473, 514, 671, 686, 1050, 1064, 2264
HgaI GACGC 3 cut(s) 19, 906, 1018
HhaI GCGC 3 cut(s) 233, 682, 1788
Hin1I GRCGYC 2 cut(s) 231, 1010
Hin1II CATG 8 cut(s) 570, 712, 1143, 1720, 2145, 2205, 2237, 2284
Hin6I GCGC 3 cut(s) 231, 680, 1786
HinP1I GCGC 3 cut(s) 231, 680, 1786
HincII GTYRAC 1 cut(s) 1464
HindII GTYRAC 1 cut(s) 1464
HindIII AAGCTT 2 cut(s) 442, 1664
HpaII CCGG 8 cut(s) 423, 473, 514, 671, 686, 1050, 1064, 2264
HphI GGTGA 5 cut(s) 136, 757, 1247, 1958, 2207
Hpy166II GTNNAC 9 cut(s) 44, 727, 748, 1152, 1213, 1464, 1534, 1544, 2252
Hpy188III TCNNGA 6 cut(s) 539, 1593, 1835, 1842, 1895, 2003
Hpy8I GTNNAC 9 cut(s) 44, 727, 748, 1152, 1213, 1464, 1534, 1544, 2252
Hpy99I CGWCG 3 cut(s) 212, 460, 736
HpyAV CCTTC 9 cut(s) 404, 558, 1420, 1508, 1750, 1952, 2012, 2180, 2363
HpyCH4III ACNGT 4 cut(s) 208, 313, 875, 905
HpyCH4IV ACGT 2 cut(s) 1019, 2399
HpyF10VI GCNNNNNNNGC 2 cut(s) 686, 1009
HpySE526I ACGT 2 cut(s) 1019, 2399
Hsp92I GRCGYC 2 cut(s) 231, 1010
Hsp92II CATG 8 cut(s) 570, 712, 1143, 1720, 2145, 2205, 2237, 2284
HspAI GCGC 3 cut(s) 231, 680, 1786
KasI GGCGCC 1 cut(s) 230
KflI GGGWCCC 1 cut(s) 862
KroI GCCGGC 1 cut(s) 422
KroNI GCCGGC 1 cut(s) 424
Ksp22I TGATCA 1 cut(s) 264
Kzo9I GATC 7 cut(s) 237, 264, 956, 1204, 1257, 1864, 1891
LguI GCTCTTC 1 cut(s) 1413
LmnI GCTCC 4 cut(s) 413, 633, 972, 2005
Lsp1109I GCAGC 4 cut(s) 68, 567, 589, 860
LweI GCATC 3 cut(s) 1325, 2216, 2238
MaeI CTAG 6 cut(s) 287, 858, 954, 1274, 1812, 1932
MaeII ACGT 2 cut(s) 1019, 2399
MaeIII GTNAC 6 cut(s) 468, 869, 1039, 1235, 1361, 1946
MalI GATC 7 cut(s) 239, 266, 958, 1206, 1259, 1866, 1893
MbiI CCGCTC 1 cut(s) 636
MboI GATC 7 cut(s) 237, 264, 956, 1204, 1257, 1864, 1891
MflI RGATCY 2 cut(s) 1257, 1864
Mly113I GGCGCC 1 cut(s) 231
MlyI GAGTC 5 cut(s) 239, 277, 544, 1368, 2207
MmeI TCCRAC 2 cut(s) 438, 1960
Mph1103I ATGCAT 2 cut(s) 2143, 2231
MroNI GCCGGC 1 cut(s) 422
MroXI GAANNNNTTC 2 cut(s) 1391, 1610
MseI TTAA 8 cut(s) 510, 782, 977, 1254, 2063, 2124, 2388, 2440
MslI CAYNNNNRTG 1 cut(s) 1018
MspA1I CMGCKG 3 cut(s) 59, 580, 663
MspI CCGG 8 cut(s) 423, 473, 514, 671, 686, 1050, 1064, 2264
Mva1269I GAATGC 1 cut(s) 1680
MvaI CCWGG 8 cut(s) 117, 150, 505, 555, 1230, 1241, 1439, 2340
MvnI CGCG 1 cut(s) 1896
MwoI GCNNNNNNNGC 2 cut(s) 686, 1009
NaeI GCCGGC 1 cut(s) 424
NarI GGCGCC 1 cut(s) 231
NciI CCSGG 3 cut(s) 474, 1050, 1051
NdeI CATATG 1 cut(s) 1987
NdeII GATC 7 cut(s) 237, 264, 956, 1204, 1257, 1864, 1891
NgoMIV GCCGGC 1 cut(s) 422
NlaIII CATG 8 cut(s) 570, 712, 1143, 1720, 2145, 2205, 2237, 2284
NlaIV GGNNCC 6 cut(s) 232, 415, 863, 864, 1267, 2001
NmuCI GTSAC 4 cut(s) 869, 1039, 1235, 1946
NruI TCGCGA 1 cut(s) 1896
NsiI ATGCAT 2 cut(s) 2143, 2231
NspI RCATGY 1 cut(s) 1720
OliI CACNNNNGTG 1 cut(s) 1018
PceI AGGCCT 1 cut(s) 153
PciSI GCTCTTC 1 cut(s) 1413
PcsI WCGNNNNNNNCGW 1 cut(s) 1016
PctI GAATGC 1 cut(s) 1680
PdiI GCCGGC 1 cut(s) 424
PdmI GAANNNNTTC 2 cut(s) 1391, 1610
PfeI GAWTC 8 cut(s) 223, 945, 1099, 1225, 1392, 1736, 1838, 2343
PflFI GACNNNGTC 1 cut(s) 2281
PfoI TCCNGGA 1 cut(s) 553
PkrI GCNGC 4 cut(s) 58, 579, 582, 850
PleI GAGTC 5 cut(s) 239, 277, 543, 1368, 2206
PluTI GGCGCC 1 cut(s) 234
PpsI GAGTC 5 cut(s) 239, 277, 543, 1368, 2206
PpuMI RGGWCCY 1 cut(s) 862
Psp5II RGGWCCY 1 cut(s) 862
Psp6I CCWGG 8 cut(s) 115, 148, 503, 553, 1228, 1239, 1437, 2338
PspEI GGTNACC 2 cut(s) 1235, 1946
PspFI CCCAGC 1 cut(s) 484
PspGI CCWGG 8 cut(s) 115, 148, 503, 553, 1228, 1239, 1437, 2338
PspN4I GGNNCC 6 cut(s) 232, 415, 863, 864, 1267, 2001
PspPI GGNCC 4 cut(s) 638, 862, 1116, 1526
PspPPI RGGWCCY 1 cut(s) 862
PstI CTGCAG 1 cut(s) 58
PsuI RGATCY 2 cut(s) 1257, 1864
PsyI GACNNNGTC 1 cut(s) 2281
PvuII CAGCTG 2 cut(s) 59, 580
RruI TCGCGA 1 cut(s) 1896
RsaI GTAC 7 cut(s) 185, 1151, 1402, 1535, 1543, 1758, 2253
RsaNI GTAC 7 cut(s) 184, 1150, 1401, 1534, 1542, 1757, 2252
RseI CAYNNNNRTG 1 cut(s) 1018
Rsr2I CGGWCCG 1 cut(s) 638
RsrII CGGWCCG 1 cut(s) 638
SapI GCTCTTC 1 cut(s) 1413
SaqAI TTAA 8 cut(s) 510, 782, 977, 1254, 2063, 2124, 2388, 2440
SatI GCNGC 4 cut(s) 57, 578, 581, 849
Sau3AI GATC 7 cut(s) 237, 264, 956, 1204, 1257, 1864, 1891
Sau96I GGNCC 4 cut(s) 638, 862, 1116, 1526
SchI GAGTC 5 cut(s) 239, 277, 544, 1368, 2207
SfaNI GCATC 3 cut(s) 1325, 2216, 2238
SfcI CTRYAG 1 cut(s) 54
SfoI GGCGCC 1 cut(s) 232
SinI GGWCC 3 cut(s) 638, 862, 1526
SmaI CCCGGG 1 cut(s) 1051
SmiMI CAYNNNNRTG 1 cut(s) 1018
SmlI CTYRAG 3 cut(s) 496, 1103, 2429
SmoI CTYRAG 3 cut(s) 496, 1103, 2429
SseBI AGGCCT 1 cut(s) 153
SsiI CCGC 7 cut(s) 166, 631, 636, 663, 799, 1803, 1944
SspDI GGCGCC 1 cut(s) 230
SspI AATATT 1 cut(s) 352
SspMI CTAG 6 cut(s) 287, 858, 954, 1274, 1812, 1932
StuI AGGCCT 1 cut(s) 153
StyI CCWWGG 2 cut(s) 105, 857
TaaI ACNGT 4 cut(s) 208, 313, 875, 905
TaiI ACGT 2 cut(s) 1022, 2402
TaqI TCGA 3 cut(s) 226, 332, 1455
TaqII GACCGA 1 cut(s) 843
TatI WGTACW 2 cut(s) 1533, 2251
TfiI GAWTC 8 cut(s) 223, 945, 1099, 1225, 1392, 1736, 1838, 2343
Tru1I TTAA 8 cut(s) 510, 782, 977, 1254, 2063, 2124, 2388, 2440
Tru9I TTAA 8 cut(s) 510, 782, 977, 1254, 2063, 2124, 2388, 2440
TscAI CASTG 4 cut(s) 94, 966, 1020, 1575
TseFI GTSAC 4 cut(s) 869, 1039, 1235, 1946
TseI GCWGC 4 cut(s) 56, 577, 580, 848
Tsp45I GTSAC 4 cut(s) 869, 1039, 1235, 1946
TspGWI ACGGA 2 cut(s) 444, 630
TspMI CCCGGG 1 cut(s) 1049
TspRI CASTG 4 cut(s) 94, 966, 1020, 1575
Tth111I GACNNNGTC 1 cut(s) 2281
VpaK11BI GGWCC 3 cut(s) 638, 862, 1526
XagI CCTNNNNNAGG 1 cut(s) 2429
XapI RAATTY 2 cut(s) 328, 778
XceI RCATGY 1 cut(s) 1720
XcmI CCANNNNNNNNNTGG 1 cut(s) 1729
XmaI CCCGGG 1 cut(s) 1049
XmaJI CCTAGG 1 cut(s) 857
XmiI GTMKAC 1 cut(s) 1212
XmnI GAANNNNTTC 2 cut(s) 1391, 1610
XspI CTAG 6 cut(s) 287, 858, 954, 1274, 1812, 1932
Zsp2I ATGCAT 2 cut(s) 2143, 2231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.