Serine threonine-protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PAS_2 | PF08446 | 79 - 191 | 6.4e-34 | PAS fold |
| GAF | PF01590 | 224 - 394 | 3.3e-17 | GAF domain |
| PHY | PF00360 | 407 - 582 | 1.1e-56 | Phytochrome region |
| PAS | PF00989 | 614 - 729 | 1.9e-24 | PAS fold |
| PAS_4 | PF08448 | 621 - 730 | 3.3e-08 | PAS fold |
| PAS | PF00989 | 745 - 864 | 4.2e-18 | PAS fold |
| HisKA | PF00512 | 886 - 948 | 2.9e-09 | His Kinase A (phospho-acceptor) domain |
| HATPase_c | PF02518 | 998 - 1105 | 6.2e-12 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1792 |
| Acc36I | ACCTGC | 2 cut(s) | 1792, 2616 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1071, 1744 |
| AccI | GTMKAC | 1 cut(s) | 2725 |
| AccII | CGCG | 1 cut(s) | 2002 |
| AclWI | GGATC | 3 cut(s) | 578, 1305, 2148 |
| AcoI | YGGCCR | 4 cut(s) | 441, 450, 1200, 2118 |
| AcsI | RAATTY | 8 cut(s) | 958, 2077, 2213, 2432, 2645, 2873, 3084, 3165 |
| AcuI | CTGAAG | 5 cut(s) | 188, 635, 1166, 1470, 2993 |
| AfaI | GTAC | 6 cut(s) | 25, 361, 743, 1328, 1435, 2445 |
| AflII | CTTAAG | 1 cut(s) | 2660 |
| AflIII | ACRYGT | 3 cut(s) | 999, 1340, 2720 |
| AgeI | ACCGGT | 1 cut(s) | 20 |
| AhlI | ACTAGT | 1 cut(s) | 2777 |
| AjnI | CCWGG | 6 cut(s) | 661, 1737, 1783, 2377, 3091, 3154 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1660, 1692, 2991, 3023 |
| Alw21I | GWGCWC | 3 cut(s) | 225, 262, 3383 |
| Alw26I | GTCTC | 5 cut(s) | 660, 1551, 1722, 1853, 1904 |
| AlwI | GGATC | 3 cut(s) | 578, 1305, 2148 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 125, 608, 715, 946 |
| Ama87I | CYCGRG | 1 cut(s) | 643 |
| AoxI | GGCC | 5 cut(s) | 57, 441, 450, 1200, 2118 |
| ApoI | RAATTY | 8 cut(s) | 958, 2077, 2213, 2432, 2645, 2873, 3084, 3165 |
| AseI | ATTAAT | 1 cut(s) | 1695 |
| AsiGI | ACCGGT | 1 cut(s) | 20 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1516, 2481, 2874 |
| AspS9I | GGNCC | 4 cut(s) | 57, 501, 1757, 3277 |
| AsuC2I | CCSGG | 1 cut(s) | 1253 |
| AvaI | CYCGRG | 1 cut(s) | 643 |
| AvaII | GGWCC | 3 cut(s) | 501, 1757, 3277 |
| AxyI | CCTNAGG | 2 cut(s) | 216, 843 |
| BalI | TGGCCA | 2 cut(s) | 443, 2120 |
| BanII | GRGCYC | 1 cut(s) | 1016 |
| Bbv12I | GWGCWC | 3 cut(s) | 225, 262, 3383 |
| BbvCI | CCTCAGC | 2 cut(s) | 37, 2091 |
| BceAI | ACGGC | 2 cut(s) | 1878, 2603 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1679, 1713 |
| BciT130I | CCWGG | 6 cut(s) | 663, 1739, 1785, 2379, 3093, 3156 |
| BciVI | GTATCC | 2 cut(s) | 2720, 2818 |
| BclI | TGATCA | 2 cut(s) | 75, 760 |
| BcnI | CCSGG | 1 cut(s) | 1253 |
| BcoDI | GTCTC | 5 cut(s) | 660, 1551, 1722, 1853, 1904 |
| BcuI | ACTAGT | 1 cut(s) | 2777 |
| BfaI | CTAG | 3 cut(s) | 498, 1287, 2778 |
| BfmI | CTRYAG | 5 cut(s) | 1330, 1422, 1467, 2609, 2942 |
| BfrI | CTTAAG | 1 cut(s) | 2660 |
| BfuAI | ACCTGC | 2 cut(s) | 1792, 2616 |
| BfuI | GTATCC | 2 cut(s) | 2720, 2818 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 449 |
| BlpI | GCTNAGC | 1 cut(s) | 1581 |
| BmcAI | AGTACT | 1 cut(s) | 1435 |
| Bme1390I | CCNGG | 7 cut(s) | 663, 1253, 1739, 1785, 2379, 3093, 3156 |
| Bme18I | GGWCC | 3 cut(s) | 501, 1757, 3277 |
| BmeT110I | CYCGRG | 1 cut(s) | 643 |
| BmgT120I | GGNCC | 4 cut(s) | 57, 501, 1757, 3277 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 7 cut(s) | 663, 1253, 1739, 1785, 2379, 3093, 3156 |
| BmrI | ACTGGG | 1 cut(s) | 1487 |
| BmuI | ACTGGG | 1 cut(s) | 1487 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1355 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 320, 352 |
| BpmI | CTGGAG | 3 cut(s) | 684, 956, 2400 |
| Bpu10I | CCTNAGC | 3 cut(s) | 37, 1761, 2091 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1581 |
| BpuEI | CTTGAG | 4 cut(s) | 1388, 1851, 2834, 2902 |
| BpuMI | CCSGG | 1 cut(s) | 1253 |
| BsaAI | YACGTR | 1 cut(s) | 2723 |
| BsaI | GGTCTC | 2 cut(s) | 1551, 1904 |
| BsaJI | CCNNGG | 7 cut(s) | 661, 831, 1557, 1676, 2377, 2619, 3154 |
| BsaWI | WCCGGW | 3 cut(s) | 20, 969, 2712 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1169, 1199, 1267, 1297, 2712, 2742, 3043, 3073 |
| Bse118I | RCCGGY | 2 cut(s) | 20, 3197 |
| Bse1I | ACTGG | 8 cut(s) | 444, 724, 1032, 1482, 1759, 2221, 2344, 3280 |
| Bse21I | CCTNAGG | 2 cut(s) | 216, 843 |
| Bse3DI | GCAATG | 7 cut(s) | 470, 904, 1114, 1489, 1965, 2331, 2857 |
| BseBI | CCWGG | 6 cut(s) | 663, 1739, 1785, 2379, 3093, 3156 |
| BseDI | CCNNGG | 7 cut(s) | 661, 831, 1557, 1676, 2377, 2619, 3154 |
| BseMI | GCAATG | 7 cut(s) | 470, 904, 1114, 1489, 1965, 2331, 2857 |
| BseNI | ACTGG | 8 cut(s) | 444, 724, 1032, 1482, 1759, 2221, 2344, 3280 |
| BseRI | GAGGAG | 5 cut(s) | 233, 681, 1238, 1590, 2845 |
| BseX3I | CGGCCG | 1 cut(s) | 450 |
| BseYI | CCCAGC | 1 cut(s) | 3069 |
| BsgI | GTGCAG | 2 cut(s) | 632, 3159 |
| Bsh1236I | CGCG | 1 cut(s) | 2002 |
| Bsh1285I | CGRYCG | 1 cut(s) | 453 |
| BshFI | GGCC | 5 cut(s) | 59, 443, 452, 1202, 2120 |
| BshTI | ACCGGT | 1 cut(s) | 20 |
| BsiEI | CGRYCG | 1 cut(s) | 453 |
| BsiHKAI | GWGCWC | 3 cut(s) | 225, 262, 3383 |
| BsiHKCI | CYCGRG | 1 cut(s) | 643 |
| BsiSI | CCGG | 5 cut(s) | 21, 970, 1252, 2713, 3198 |
| BslFI | GGGAC | 7 cut(s) | 197, 580, 601, 691, 1351, 1954, 2246 |
| BsmAI | GTCTC | 5 cut(s) | 660, 1551, 1722, 1853, 1904 |
| BsmBI | CGTCTC | 1 cut(s) | 1853 |
| BsmFI | GGGAC | 7 cut(s) | 197, 580, 601, 691, 1351, 1954, 2246 |
| BsmI | GAATGC | 4 cut(s) | 1623, 1921, 2302, 2323 |
| BsnI | GGCC | 5 cut(s) | 59, 443, 452, 1202, 2120 |
| Bso31I | GGTCTC | 2 cut(s) | 1551, 1904 |
| BsoBI | CYCGRG | 1 cut(s) | 643 |
| Bsp1286I | GDGCHC | 4 cut(s) | 225, 262, 1016, 3383 |
| Bsp1407I | TGTACA | 1 cut(s) | 741 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1581 |
| BspANI | GGCC | 5 cut(s) | 59, 443, 452, 1202, 2120 |
| BspFNI | CGCG | 1 cut(s) | 2002 |
| BspHI | TCATGA | 3 cut(s) | 751, 1990, 2953 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspMAI | CTGCAG | 2 cut(s) | 1471, 2613 |
| BspMI | ACCTGC | 2 cut(s) | 1792, 2616 |
| BspPI | GGATC | 3 cut(s) | 578, 1305, 2148 |
| BspQI | GCTCTTC | 1 cut(s) | 924 |
| BspTI | CTTAAG | 1 cut(s) | 2660 |
| BspTNI | GGTCTC | 2 cut(s) | 1551, 1904 |
| BsrDI | GCAATG | 7 cut(s) | 470, 904, 1114, 1489, 1965, 2331, 2857 |
| BsrFI | RCCGGY | 2 cut(s) | 20, 3197 |
| BsrGI | TGTACA | 1 cut(s) | 741 |
| BsrI | ACTGG | 8 cut(s) | 444, 724, 1032, 1482, 1759, 2221, 2344, 3280 |
| BssAI | RCCGGY | 2 cut(s) | 20, 3197 |
| BssECI | CCNNGG | 7 cut(s) | 661, 831, 1557, 1676, 2377, 2619, 3154 |
| BssT1I | CCWWGG | 1 cut(s) | 1676 |
| Bst2UI | CCWGG | 6 cut(s) | 663, 1739, 1785, 2379, 3093, 3156 |
| Bst6I | CTCTTC | 3 cut(s) | 924, 1128, 2656 |
| BstAFI | CTTAAG | 1 cut(s) | 2660 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 104 |
| BstAUI | TGTACA | 1 cut(s) | 741 |
| BstBAI | YACGTR | 1 cut(s) | 2723 |
| BstC8I | GCNNGC | 9 cut(s) | 284, 288, 570, 627, 1152, 1673, 2302, 2539, 2616 |
| BstDSI | CCRYGG | 2 cut(s) | 831, 2619 |
| BstEII | GGTNACC | 2 cut(s) | 972, 1457 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3159 |
| BstFNI | CGCG | 1 cut(s) | 2002 |
| BstMAI | GTCTC | 5 cut(s) | 660, 1551, 1722, 1853, 1904 |
| BstMCI | CGRYCG | 1 cut(s) | 453 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 104, 440, 449, 472, 635, 940, 1925 |
| BstNI | CCWGG | 6 cut(s) | 663, 1739, 1785, 2379, 3093, 3156 |
| BstNSI | RCATGY | 7 cut(s) | 286, 1003, 1246, 1344, 1839, 2680, 2790 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1355 |
| BstPI | GGTNACC | 2 cut(s) | 972, 1457 |
| BstSCI | CCNGG | 7 cut(s) | 661, 1251, 1737, 1783, 2377, 3091, 3154 |
| BstSFI | CTRYAG | 5 cut(s) | 1330, 1422, 1467, 2609, 2942 |
| BstUI | CGCG | 1 cut(s) | 2002 |
| BstX2I | RGATCY | 1 cut(s) | 1297 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3069 |
| BstYI | RGATCY | 1 cut(s) | 1297 |
| BstZI | CGGCCG | 1 cut(s) | 450 |
| Bsu36I | CCTNAGG | 2 cut(s) | 216, 843 |
| BsuI | GTATCC | 2 cut(s) | 2720, 2818 |
| BsuRI | GGCC | 5 cut(s) | 59, 443, 452, 1202, 2120 |
| BtgI | CCRYGG | 2 cut(s) | 831, 2619 |
| BtsI | GCAGTG | 1 cut(s) | 3171 |
| BtsIMutI | CAGTG | 5 cut(s) | 153, 437, 1025, 3171, 3215 |
| BveI | ACCTGC | 2 cut(s) | 1792, 2616 |
| Cac8I | GCNNGC | 9 cut(s) | 284, 288, 570, 627, 1152, 1673, 2302, 2539, 2616 |
| CaiI | CAGNNNCTG | 4 cut(s) | 125, 608, 715, 946 |
| CciI | TCATGA | 3 cut(s) | 751, 1990, 2953 |
| CciNI | GCGGCCGC | 1 cut(s) | 450 |
| Cfr10I | RCCGGY | 2 cut(s) | 20, 3197 |
| Cfr13I | GGNCC | 4 cut(s) | 57, 501, 1757, 3277 |
| CseI | GACGC | 1 cut(s) | 131 |
| CsiI | ACCWGGT | 1 cut(s) | 3091 |
| Csp6I | GTAC | 6 cut(s) | 24, 360, 742, 1327, 1434, 2444 |
| CspAI | ACCGGT | 1 cut(s) | 20 |
| CviQI | GTAC | 6 cut(s) | 24, 360, 742, 1327, 1434, 2444 |
| DraI | TTTAAA | 1 cut(s) | 135 |
| EaeI | YGGCCR | 4 cut(s) | 441, 450, 1200, 2118 |
| EagI | CGGCCG | 1 cut(s) | 450 |
| Eam1104I | CTCTTC | 3 cut(s) | 924, 1128, 2656 |
| EarI | CTCTTC | 3 cut(s) | 924, 1128, 2656 |
| EclXI | CGGCCG | 1 cut(s) | 450 |
| Eco130I | CCWWGG | 1 cut(s) | 1676 |
| Eco24I | GRGCYC | 1 cut(s) | 1016 |
| Eco31I | GGTCTC | 2 cut(s) | 1551, 1904 |
| Eco32I | GATATC | 1 cut(s) | 838 |
| Eco47I | GGWCC | 3 cut(s) | 501, 1757, 3277 |
| Eco52I | CGGCCG | 1 cut(s) | 450 |
| Eco57I | CTGAAG | 5 cut(s) | 188, 635, 1166, 1470, 2993 |
| Eco81I | CCTNAGG | 2 cut(s) | 216, 843 |
| Eco88I | CYCGRG | 1 cut(s) | 643 |
| Eco91I | GGTNACC | 2 cut(s) | 972, 1457 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3159 |
| EcoO65I | GGTNACC | 2 cut(s) | 972, 1457 |
| EcoRI | GAATTC | 2 cut(s) | 958, 3165 |
| EcoRII | CCWGG | 6 cut(s) | 661, 1737, 1783, 2377, 3091, 3154 |
| EcoRV | GATATC | 1 cut(s) | 838 |
| EcoT14I | CCWWGG | 1 cut(s) | 1676 |
| EcoT22I | ATGCAT | 1 cut(s) | 2788 |
| EcoT38I | GRGCYC | 1 cut(s) | 1016 |
| ErhI | CCWWGG | 1 cut(s) | 1676 |
| Esp3I | CGTCTC | 1 cut(s) | 1853 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1660, 1692, 3213, 3245, 3293, 3325 |
| FaqI | GGGAC | 7 cut(s) | 197, 580, 601, 691, 1351, 1954, 2246 |
| FauI | CCCGC | 1 cut(s) | 1112 |
| FbaI | TGATCA | 2 cut(s) | 75, 760 |
| FblI | GTMKAC | 1 cut(s) | 2725 |
| FriOI | GRGCYC | 1 cut(s) | 1016 |
| FspBI | CTAG | 3 cut(s) | 498, 1287, 2778 |
| GsaI | CCCAGC | 1 cut(s) | 3073 |
| GsuI | CTGGAG | 3 cut(s) | 684, 956, 2400 |
| HaeIII | GGCC | 5 cut(s) | 59, 443, 452, 1202, 2120 |
| HapII | CCGG | 5 cut(s) | 21, 970, 1252, 2713, 3198 |
| HgaI | GACGC | 1 cut(s) | 131 |
| HincII | GTYRAC | 1 cut(s) | 1350 |
| HindII | GTYRAC | 1 cut(s) | 1350 |
| HindIII | AAGCTT | 3 cut(s) | 623, 1067, 1669 |
| HpaII | CCGG | 5 cut(s) | 21, 970, 1252, 2713, 3198 |
| Hpy166II | GTNNAC | 7 cut(s) | 153, 417, 742, 1350, 2718, 2726, 3134 |
| Hpy8I | GTNNAC | 7 cut(s) | 153, 417, 742, 1350, 2718, 2726, 3134 |
| HpyAV | CCTTC | 6 cut(s) | 783, 2501, 2618, 2837, 3066, 3218 |
| HpyCH4IV | ACGT | 3 cut(s) | 51, 305, 2722 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 104, 440, 449, 472, 635, 940, 1925 |
| HpySE526I | ACGT | 3 cut(s) | 51, 305, 2722 |
| Ksp22I | TGATCA | 2 cut(s) | 75, 760 |
| LguI | GCTCTTC | 1 cut(s) | 924 |
| MabI | ACCWGGT | 1 cut(s) | 3091 |
| MaeI | CTAG | 3 cut(s) | 498, 1287, 2778 |
| MaeII | ACGT | 3 cut(s) | 51, 305, 2722 |
| MboII | GAAGA | 9 cut(s) | 389, 767, 941, 1115, 1222, 1626, 2643, 2882, 2978 |
| MfeI | CAATTG | 3 cut(s) | 291, 1196, 2405 |
| MflI | RGATCY | 1 cut(s) | 1297 |
| MhlI | GDGCHC | 4 cut(s) | 225, 262, 1016, 3383 |
| MlsI | TGGCCA | 2 cut(s) | 443, 2120 |
| MluNI | TGGCCA | 2 cut(s) | 443, 2120 |
| Mox20I | TGGCCA | 2 cut(s) | 443, 2120 |
| Mph1103I | ATGCAT | 1 cut(s) | 2788 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1516, 2481, 2874 |
| MscI | TGGCCA | 2 cut(s) | 443, 2120 |
| MslI | CAYNNNNRTG | 2 cut(s) | 114, 756 |
| Msp20I | TGGCCA | 2 cut(s) | 443, 2120 |
| MspA1I | CMGCKG | 1 cut(s) | 2105 |
| MspCI | CTTAAG | 1 cut(s) | 2660 |
| MspI | CCGG | 5 cut(s) | 21, 970, 1252, 2713, 3198 |
| MspR9I | CCNGG | 7 cut(s) | 663, 1253, 1739, 1785, 2379, 3093, 3156 |
| MunI | CAATTG | 3 cut(s) | 291, 1196, 2405 |
| Mva1269I | GAATGC | 4 cut(s) | 1623, 1921, 2302, 2323 |
| MvaI | CCWGG | 6 cut(s) | 663, 1739, 1785, 2379, 3093, 3156 |
| MvnI | CGCG | 1 cut(s) | 2002 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 104, 440, 449, 472, 635, 940, 1925 |
| NciI | CCSGG | 1 cut(s) | 1253 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmeAIII | GCCGAG | 2 cut(s) | 1417, 1582 |
| NmuCI | GTSAC | 5 cut(s) | 972, 1238, 1357, 1371, 3363 |
| NotI | GCGGCCGC | 1 cut(s) | 450 |
| NsiI | ATGCAT | 1 cut(s) | 2788 |
| NspI | RCATGY | 7 cut(s) | 286, 1003, 1246, 1344, 1839, 2680, 2790 |
| PaeI | GCATGC | 1 cut(s) | 286 |
| PaeR7I | CTCGAG | 1 cut(s) | 643 |
| PagI | TCATGA | 3 cut(s) | 751, 1990, 2953 |
| PaqCI | CACCTGC | 1 cut(s) | 1792 |
| PciI | ACATGT | 2 cut(s) | 999, 1340 |
| PciSI | GCTCTTC | 1 cut(s) | 924 |
| PctI | GAATGC | 4 cut(s) | 1623, 1921, 2302, 2323 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1516, 2481, 2874 |
| PflFI | GACNNNGTC | 1 cut(s) | 731 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1071, 1744 |
| PfoI | TCCNGGA | 2 cut(s) | 1251, 1737 |
| PinAI | ACCGGT | 1 cut(s) | 20 |
| Ppu21I | YACGTR | 1 cut(s) | 2723 |
| PscI | ACATGT | 2 cut(s) | 999, 1340 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1355 |
| PshBI | ATTAAT | 1 cut(s) | 1695 |
| Psp6I | CCWGG | 6 cut(s) | 661, 1737, 1783, 2377, 3091, 3154 |
| PspEI | GGTNACC | 2 cut(s) | 972, 1457 |
| PspFI | CCCAGC | 1 cut(s) | 3069 |
| PspGI | CCWGG | 6 cut(s) | 661, 1737, 1783, 2377, 3091, 3154 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspPI | GGNCC | 4 cut(s) | 57, 501, 1757, 3277 |
| PstI | CTGCAG | 2 cut(s) | 1471, 2613 |
| PstNI | CAGNNNCTG | 4 cut(s) | 125, 608, 715, 946 |
| PsuI | RGATCY | 1 cut(s) | 1297 |
| PsyI | GACNNNGTC | 1 cut(s) | 731 |
| RsaI | GTAC | 6 cut(s) | 25, 361, 743, 1328, 1435, 2445 |
| RsaNI | GTAC | 6 cut(s) | 24, 360, 742, 1327, 1434, 2444 |
| RseI | CAYNNNNRTG | 2 cut(s) | 114, 756 |
| SapI | GCTCTTC | 1 cut(s) | 924 |
| Sau96I | GGNCC | 4 cut(s) | 57, 501, 1757, 3277 |
| ScaI | AGTACT | 1 cut(s) | 1435 |
| ScrFI | CCNGG | 7 cut(s) | 663, 1253, 1739, 1785, 2379, 3093, 3156 |
| SduI | GDGCHC | 4 cut(s) | 225, 262, 1016, 3383 |
| SexAI | ACCWGGT | 1 cut(s) | 3091 |
| SfcI | CTRYAG | 5 cut(s) | 1330, 1422, 1467, 2609, 2942 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 449 |
| Sfr274I | CTCGAG | 1 cut(s) | 643 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3197 |
| SinI | GGWCC | 3 cut(s) | 501, 1757, 3277 |
| SlaI | CTCGAG | 1 cut(s) | 643 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 114, 756 |
| SmlI | CTYRAG | 6 cut(s) | 643, 1403, 1866, 2660, 2813, 2881 |
| SmoI | CTYRAG | 6 cut(s) | 643, 1403, 1866, 2660, 2813, 2881 |
| SpeI | ACTAGT | 1 cut(s) | 2777 |
| SphI | GCATGC | 1 cut(s) | 286 |
| SspI | AATATT | 2 cut(s) | 2059, 2280 |
| SspMI | CTAG | 3 cut(s) | 498, 1287, 2778 |
| StyD4I | CCNGG | 7 cut(s) | 661, 1251, 1737, 1783, 2377, 3091, 3154 |
| StyI | CCWWGG | 1 cut(s) | 1676 |
| TaiI | ACGT | 3 cut(s) | 54, 308, 2725 |
| TaqI | TCGA | 2 cut(s) | 458, 644 |
| TatI | WGTACW | 4 cut(s) | 741, 1326, 1433, 2443 |
| TauI | GCSGC | 3 cut(s) | 452, 455, 851 |
| TscAI | CASTG | 5 cut(s) | 160, 444, 1032, 3178, 3215 |
| TseFI | GTSAC | 5 cut(s) | 972, 1238, 1357, 1371, 3363 |
| Tsp45I | GTSAC | 5 cut(s) | 972, 1238, 1357, 1371, 3363 |
| TspDTI | ATGAA | 8 cut(s) | 185, 312, 740, 768, 1979, 2705, 2942, 3281 |
| TspGWI | ACGGA | 3 cut(s) | 848, 2222, 3119 |
| TspRI | CASTG | 5 cut(s) | 160, 444, 1032, 3178, 3215 |
| Tth111I | GACNNNGTC | 1 cut(s) | 731 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1071, 1744 |
| Vha464I | CTTAAG | 1 cut(s) | 2660 |
| VpaK11BI | GGWCC | 3 cut(s) | 501, 1757, 3277 |
| VspI | ATTAAT | 1 cut(s) | 1695 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3159 |
| XapI | RAATTY | 8 cut(s) | 958, 2077, 2213, 2432, 2645, 2873, 3084, 3165 |
| XceI | RCATGY | 7 cut(s) | 286, 1003, 1246, 1344, 1839, 2680, 2790 |
| XhoI | CTCGAG | 1 cut(s) | 643 |
| XmiI | GTMKAC | 1 cut(s) | 2725 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1516, 2481, 2874 |
| XspI | CTAG | 3 cut(s) | 498, 1287, 2778 |
| ZrmI | AGTACT | 1 cut(s) | 1435 |
| Zsp2I | ATGCAT | 1 cut(s) | 2788 |