Rorug02G0357600

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
45122814 .. 45123857
1044 bp
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UTR
Exon/CDS
Intron
Rorug02G0357600.1

Sequence Viewer

Length: 1044 bp
ATGTACGACGATATAGAAGACTTTCTGCAGATTTATAATAATCTCATGCCAGTGAGATACTCCTACTCAGACATCAAGAAAATGACAAGGGATTTCAAGGACAAATTGGGTGCAGGAGGCTATGGGACAGTATACAAGGCAACGCTTCGTAGTGGTAGGCTTGTAGCCATCAAGATGCTGGGTAAGTCCCAAGCTAATGGGCAAGACTTTATCAATGAAGTTGCGACCATTGGAAGGATTCACCATGTTAATGTGGTGCAACTGATTGGATTTTCTGTTGATGGATCAAAACGTGCTCTTGTGTATGATTTCATGCCTAATGGGTCTCTTGACAAGTACATCTTTCTTCAACAAGGAGTGAACTCCTTAAGTTTCAAGAAGATCTTTGAAATTGCCCTTGGAGTGGCTCGTGGGATCGACTATCTGCATCGAGGGTGTGATATGCAAATTTTGCACTTTGACATCAAGCCTCATAACATTCTTCTGGACGAGAATTTCACTCCAAAGGTTTCTGATTTTGGGTTAGCAAGGTTATACCCATTGGATAATAGCATTGTGTCTTTGACCGCAGTAAGAGGCACGATAGGATACATAGCTCCCGAGCTATTCTATAAGAACATTGGAGGTGTTTCCTACAAGGCTGATGTATATAGTTTTGGAATGCTATTGATGGAAATGGCTGGGAGAAGGAAGAACCTGAATTCAGGGATAGAGCATTCAAGCCAGTTTAGTGAAAACTACTTTCCTTCATGGGTATCTAACCAATTGAATGAAGGAAAAGACATAGAGATAGAAGACGCCACTGAGGATGAAATGAAAATCATAAAGAAGATGATTGTAGTAGCATTGTGGTGCATACAAATGAAGCCTAGTGAACGCCCTTCAATGACTAAAGTAGTCCAGATGCTTGAAGGAGAACTGGAAAGCCTTCAAATACCCCCAAAGACCAACTTATATCGACAACAAATGCCAGCAGAGGATATTGGAGGCACTTCAACTACAACAGGTGGATCAGCAATGACAGATTCTACAGAGATCAACTAA

Protein Analysis

347

Amino Acids

38.97

Weight (kDa)

5.93

Isoelectric Point (pI)

41.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 32 - 303 3.9e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 33 - 301 8.5e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 36
AccI GTMKAC 1 cut(s) 132
AciI CCGC 1 cut(s) 567
AclWI GGATC 3 cut(s) 292, 422, 1018
AcsI RAATTY 3 cut(s) 447, 493, 700
AcyI GRCGYC 1 cut(s) 798
AfaI GTAC 2 cut(s) 5, 338
AfiI CCNNNNNNNGG 2 cut(s) 234, 403
AflII CTTAAG 1 cut(s) 367
AjuI GAANNNNNNNTTGG 2 cut(s) 381, 413
AluBI AGCT 3 cut(s) 194, 596, 604
AluI AGCT 3 cut(s) 194, 596, 604
Alw21I GWGCWC 1 cut(s) 298
Alw26I GTCTC 1 cut(s) 330
AlwI GGATC 3 cut(s) 292, 422, 1018
Ama87I CYCGRG 1 cut(s) 599
ApoI RAATTY 3 cut(s) 447, 493, 700
Asp700I GAANNNNTTC 2 cut(s) 21, 927
AsuHPI GGTGA 1 cut(s) 233
AvaI CYCGRG 1 cut(s) 599
BauI CACGAG 1 cut(s) 408
BbsI GAAGAC 2 cut(s) 24, 801
Bbv12I GWGCWC 1 cut(s) 298
BccI CCATC 3 cut(s) 176, 275, 664
BciVI GTATCC 1 cut(s) 581
BcoDI GTCTC 1 cut(s) 330
BfaI CTAG 1 cut(s) 870
BfmI CTRYAG 2 cut(s) 26, 1029
BfrI CTTAAG 1 cut(s) 367
BfuI GTATCC 1 cut(s) 581
BglII AGATCT 1 cut(s) 381
BmeT110I CYCGRG 1 cut(s) 599
BmsI GCATC 3 cut(s) 165, 436, 894
BpiI GAAGAC 2 cut(s) 24, 801
BsaHI GRCGYC 1 cut(s) 798
BsaI GGTCTC 1 cut(s) 330
BsaJI CCNNGG 1 cut(s) 397
Bsc4I CCNNNNNNNGG 2 cut(s) 234, 403
Bse1I ACTGG 3 cut(s) 50, 724, 924
Bse3DI GCAATG 1 cut(s) 1023
BseDI CCNNGG 1 cut(s) 397
BseGI GGATG 1 cut(s) 814
BseLI CCNNNNNNNGG 2 cut(s) 234, 403
BseMI GCAATG 1 cut(s) 1023
BseMII CTCAG 2 cut(s) 81, 795
BseNI ACTGG 3 cut(s) 50, 724, 924
BseYI CCCAGC 2 cut(s) 178, 680
BsgI GTGCAG 1 cut(s) 132
BsiHKAI GWGCWC 1 cut(s) 298
BsiHKCI CYCGRG 1 cut(s) 599
BslFI GGGAC 2 cut(s) 139, 172
BslI CCNNNNNNNGG 2 cut(s) 234, 403
BsmAI GTCTC 1 cut(s) 330
BsmFI GGGAC 2 cut(s) 139, 172
BsmI GAATGC 2 cut(s) 666, 715
Bso31I GGTCTC 1 cut(s) 330
BsoBI CYCGRG 1 cut(s) 599
Bsp1286I GDGCHC 1 cut(s) 298
Bsp143I GATC 5 cut(s) 284, 381, 414, 1010, 1035
BspACI CCGC 1 cut(s) 567
BspCNI CTCAG 2 cut(s) 80, 796
BspMAI CTGCAG 1 cut(s) 30
BspPI GGATC 3 cut(s) 292, 422, 1018
BspTI CTTAAG 1 cut(s) 367
BspTNI GGTCTC 1 cut(s) 330
BsrDI GCAATG 1 cut(s) 1023
BsrI ACTGG 3 cut(s) 50, 724, 924
BssECI CCNNGG 1 cut(s) 397
BssMI GATC 5 cut(s) 284, 381, 414, 1010, 1035
BssNAI GTATAC 1 cut(s) 133
BssNI GRCGYC 1 cut(s) 798
BssSI CACGAG 1 cut(s) 408
BssT1I CCWWGG 1 cut(s) 397
Bst1107I GTATAC 1 cut(s) 133
Bst2BI CACGAG 1 cut(s) 408
Bst4CI ACNGT 1 cut(s) 130
BstACI GRCGYC 1 cut(s) 798
BstAFI CTTAAG 1 cut(s) 367
BstAPI GCANNNNNTGC 1 cut(s) 451
BstC8I GCNNGC 1 cut(s) 972
BstDEI CTNAG 2 cut(s) 67, 804
BstF5I GGATG 1 cut(s) 814
BstKTI GATC 5 cut(s) 287, 384, 417, 1013, 1038
BstMAI GTCTC 1 cut(s) 330
BstMBI GATC 5 cut(s) 284, 381, 414, 1010, 1035
BstMWI GCNNNNNNNGC 1 cut(s) 451
BstSFI CTRYAG 2 cut(s) 26, 1029
BstV2I GAAGAC 2 cut(s) 24, 801
BstX2I RGATCY 1 cut(s) 381
BstXI CCANNNNNNTGG 1 cut(s) 197
BstYI RGATCY 1 cut(s) 381
BstZ17I GTATAC 1 cut(s) 133
BsuI GTATCC 1 cut(s) 581
BtsCI GGATG 1 cut(s) 814
BtsIMutI CAGTG 2 cut(s) 57, 801
Cac8I GCNNGC 1 cut(s) 972
CseI GACGC 1 cut(s) 806
Csp6I GTAC 2 cut(s) 4, 337
CviAII CATG 4 cut(s) 46, 245, 313, 750
CviQI GTAC 2 cut(s) 4, 337
DdeI CTNAG 2 cut(s) 67, 804
DpnI GATC 5 cut(s) 286, 383, 416, 1012, 1037
DpnII GATC 5 cut(s) 284, 381, 414, 1010, 1035
Eco130I CCWWGG 1 cut(s) 397
Eco31I GGTCTC 1 cut(s) 330
Eco88I CYCGRG 1 cut(s) 599
EcoRI GAATTC 1 cut(s) 700
EcoT14I CCWWGG 1 cut(s) 397
ErhI CCWWGG 1 cut(s) 397
FaeI CATG 4 cut(s) 49, 248, 316, 753
FalI AAGNNNNNCTT 6 cut(s) 326, 358, 368, 400, 935, 967
FaqI GGGAC 2 cut(s) 139, 172
FatI CATG 4 cut(s) 45, 244, 312, 749
FblI GTMKAC 1 cut(s) 132
FokI GGATG 1 cut(s) 821
FspBI CTAG 1 cut(s) 870
GsaI CCCAGC 2 cut(s) 182, 684
HgaI GACGC 1 cut(s) 806
Hin1I GRCGYC 1 cut(s) 798
Hin1II CATG 4 cut(s) 49, 248, 316, 753
HinfI GANTC 2 cut(s) 238, 1025
HphI GGTGA 1 cut(s) 233
Hpy166II GTNNAC 3 cut(s) 133, 361, 875
Hpy188I TCNGA 2 cut(s) 70, 514
Hpy188III TCNNGA 7 cut(s) 76, 172, 329, 376, 485, 599, 901
Hpy8I GTNNAC 3 cut(s) 133, 361, 875
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 7 cut(s) 228, 681, 756, 767, 891, 905, 938
HpyCH4III ACNGT 1 cut(s) 130
HpyCH4IV ACGT 1 cut(s) 292
HpyCH4V TGCA 7 cut(s) 28, 113, 259, 427, 445, 454, 855
HpyF10VI GCNNNNNNNGC 1 cut(s) 451
HpyF3I CTNAG 2 cut(s) 67, 804
HpySE526I ACGT 1 cut(s) 292
Hsp92I GRCGYC 1 cut(s) 798
Hsp92II CATG 4 cut(s) 49, 248, 316, 753
Kzo9I GATC 5 cut(s) 284, 381, 414, 1010, 1035
LmnI GCTCC 1 cut(s) 601
LweI GCATC 3 cut(s) 165, 436, 894
MaeI CTAG 1 cut(s) 870
MaeII ACGT 1 cut(s) 292
MalI GATC 5 cut(s) 286, 383, 416, 1012, 1037
MboI GATC 5 cut(s) 284, 381, 414, 1010, 1035
MboII GAAGA 7 cut(s) 29, 338, 391, 473, 703, 806, 841
MfeI CAATTG 1 cut(s) 764
MflI RGATCY 1 cut(s) 381
MhlI GDGCHC 1 cut(s) 298
MluCI AATT 6 cut(s) 104, 390, 447, 493, 700, 764
MnlI CCTC 8 cut(s) 110, 425, 480, 569, 617, 799, 970, 980
MroXI GAANNNNTTC 2 cut(s) 21, 927
MseI TTAA 2 cut(s) 249, 368
MslI CAYNNNNRTG 5 cut(s) 50, 173, 249, 850, 860
MspCI CTTAAG 1 cut(s) 367
MunI CAATTG 1 cut(s) 764
Mva1269I GAATGC 2 cut(s) 666, 715
MwoI GCNNNNNNNGC 1 cut(s) 451
NdeII GATC 5 cut(s) 284, 381, 414, 1010, 1035
NlaIII CATG 4 cut(s) 49, 248, 316, 753
PctI GAATGC 2 cut(s) 666, 715
PdmI GAANNNNTTC 2 cut(s) 21, 927
PfeI GAWTC 2 cut(s) 238, 1025
PsiI TTATAA 1 cut(s) 36
PspFI CCCAGC 2 cut(s) 178, 680
PstI CTGCAG 1 cut(s) 30
PsuI RGATCY 1 cut(s) 381
RsaI GTAC 2 cut(s) 5, 338
RsaNI GTAC 2 cut(s) 4, 337
RseI CAYNNNNRTG 5 cut(s) 50, 173, 249, 850, 860
SaqAI TTAA 2 cut(s) 249, 368
Sau3AI GATC 5 cut(s) 284, 381, 414, 1010, 1035
SduI GDGCHC 1 cut(s) 298
SetI ASST 9 cut(s) 196, 295, 510, 533, 598, 606, 628, 699, 1009
SfaNI GCATC 3 cut(s) 165, 436, 894
SfcI CTRYAG 2 cut(s) 26, 1029
SmiMI CAYNNNNRTG 5 cut(s) 50, 173, 249, 850, 860
SmlI CTYRAG 1 cut(s) 367
SmoI CTYRAG 1 cut(s) 367
Sse9I AATT 6 cut(s) 104, 390, 447, 493, 700, 764
SsiI CCGC 1 cut(s) 567
SspMI CTAG 1 cut(s) 870
StyI CCWWGG 1 cut(s) 397
TaaI ACNGT 1 cut(s) 130
TaiI ACGT 1 cut(s) 295
TaqI TCGA 3 cut(s) 417, 430, 958
TasI AATT 6 cut(s) 104, 390, 447, 493, 700, 764
TatI WGTACW 1 cut(s) 336
TfiI GAWTC 2 cut(s) 238, 1025
Tru1I TTAA 2 cut(s) 249, 368
Tru9I TTAA 2 cut(s) 249, 368
TscAI CASTG 2 cut(s) 57, 808
TspDTI ATGAA 7 cut(s) 231, 301, 738, 786, 825, 830, 878
TspRI CASTG 2 cut(s) 57, 808
Vha464I CTTAAG 1 cut(s) 367
XapI RAATTY 3 cut(s) 447, 493, 700
XcmI CCANNNNNNNNNTGG 1 cut(s) 175
XmiI GTMKAC 1 cut(s) 132
XmnI GAANNNNTTC 2 cut(s) 21, 927
XspI CTAG 1 cut(s) 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.