Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0000207

Physical Location & Seq

Genomic Coordinates Reverse (-)

53542739 .. 53546377

Gene Structure 3639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG392900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGGTACAGCTATTAGATTCTGGAAACCTAGTAGTAAGAGATGTCACAAATGGAAAGTCATTGTGGCAAAGCTTCGATTATCCTTCTGATACATTGTTACCGGAAATGAAGATGGGATGGGACTTTAGGACAGAACTTAAAAGGGGATTATCAGCATGGAAAAATTCAGAAGACCCATGTCCAGGGGAATTCACTTGTGGGATTGAAATGGAAACTCATGCATACCCTGAGGTATATTTCCGGAAAGGTGGTCTGAAACGTTATCGTTCTGGCCCATGGAATGGCCAAGAATTCAGTGGTGCATCAGCACTAAGGCCTAATCCAATTTATAGTTTCGACTTCGTGTATAATGATAATGAAGTGTACTACATGTACAAACTTCGAAGCAAGTCGGTAATTTCAATCATGGTCTTAAATGGAACCACAAGCACACGCGATCGCCTTACATGGATTGAAGCAGAGCAAACTTGGAGGGTCTATGCATCAGTACCTAGAGATCTCTGTGATCGATATAACCTCTGTGGAGCAAATGCAAATTGTATCATTAGTGACAGTCCAGTATGTCGATGTCTACAAGGATTCATGCCTAAGTCACCAGAGAAATGGAATTCGACAGACTGGTCACTTGGATGTATGCGCAAGAAACCCCTAAGCTGCCAGGAAAGTGATAAAGGCAGGTTTGTCAAGCTCACTAATTTGAAATTGCCGGATGCTACACATTCTTGGGTGGACAGAAGTATGAACATCAAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCCTGTATGGCTTATACAAGCTTGGATATCAGAGCAGGAGGTTCTGGCTGCGCCATTTTGTTTGGTGATCTACTAGATATCAGAAAGCTTCCAGATGCTGGCCAGGATCTATACATTCGAATGTCGGCTTCAGAGATAGGTGATGATGGTAAAGTGAAGACAGGAATTATAGTTGCTGTTGTGATAGGCGTAGTGTTTTCAGGAATGCTCTTAGTTGGCTACTACGTCTACCGAAGCAGGACCAAATTGAAAGAGACAGAAAAACGAGAAGAAAATCTGAAGAAAAAAGGGGTACAAAAGGAGGACCTGGAGCTCCCGATCTTCAACATGAGCACAATAGCTCGTGCAACAGATAACTTTTCAGATGATATGAAGCTTGGAGAAGGTGGCTTTGGACCTGTTTACAGGGGGACACTAAATGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGCAGTTCTGGCCAAGGATTTAACGAGTTCATGAATGAAATTAAACTGATTGCCAAACTTCAGCACCGAAATCTTGTAAAGATTCTTGGTTGTTGCGTGCAAGAAGAGAAAATGCTGATGTATGAATACATGCCCAACAGAAGCCTGGACTTCTTCATTTTTGATCAAACAAGGGAAGAACTACTGTTAGATTGGCCTAAACGTTTCCACATCATTTGTGGAATTGCTCGGGGTCTCCTCTATCTCCACCAAGATTCCAGGCTAAGGATTATACATAGAGATCTAAAAGCAAGTAATGTTCTACTTGATGATGAAATGAATCCTAAAATTTCAGACTTTGGCTTGGCTAGAATATTAACCGGAGGAGATCAGACTGGAGGAAATACTAAGAGAGTGGTCGGGACATATGGCTATATGGCACCTGAATATGCTGCTGATGGGCTATTTTCTGTGAAATCCGATGTCTTTAGCTTTGGTATATTGGTGCTGGAGATTATAAGTGGACGGAGAAACAAGGGATTTTATGATCCAGACAACAGCCATAATCTTATTGGAAATGCGAGTATCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0030054 GO:0031625 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

600

Amino Acids

67.85

Weight (kDa)

8.41

Isoelectric Point (pI)

43.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	2 - 54	2.4e-17	D-mannose binding lectin
S_locus_glycop	PF00954	88 - 198	2.9e-28	S-locus glycoprotein domain
PAN_2	PF08276	219 - 287	1.1e-19	PAN-like domain
Pkinase	PF00069	381 - 580	1.6e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	384 - 578	4.1e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27300
fragaria_vesca	FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica	MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica	Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis	pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis	RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata	RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora	Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii	Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa	Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha	Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana	Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1727
AasI	GACNNNNNNGTC	1 cut(s)	619
Acc16I	TGCGCA	1 cut(s)	638
Acc36I	ACCTGC	1 cut(s)	666
AccB1I	GGYRCC	1 cut(s)	1648
AccB7I	CCANNNNNTGG	2 cut(s)	281, 878
AccI	GTMKAC	2 cut(s)	571, 1008
AccII	CGCG	1 cut(s)	435
AccIII	TCCGGA	1 cut(s)	240
AclI	AACGTT	2 cut(s)	259, 1432
AclWI	GGATC	2 cut(s)	894, 1751
AcoI	YGGCCR	3 cut(s)	283, 880, 1240
AcsI	RAATTY	5 cut(s)	163, 188, 290, 607, 1557
AcuI	CTGAAG	3 cut(s)	894, 1079, 1274
AfaI	GTAC	5 cut(s)	6, 365, 374, 489, 1074
AfiI	CCNNNNNNNGG	4 cut(s)	182, 281, 878, 1494
AflIII	ACRYGT	1 cut(s)	369
AgsI	TTSAA	8 cut(s)	206, 402, 455, 700, 772, 1030, 1105, 1230
AjnI	CCWGG	6 cut(s)	181, 657, 882, 1086, 1374, 1487
AjuI	GAANNNNNNNTTGG	2 cut(s)	1155, 1187
AloI	GAACNNNNNNTCC	2 cut(s)	764, 796
Alw21I	GWGCWC	2 cut(s)	1095, 1115
Alw26I	GTCTC	2 cut(s)	1028, 1469
AlwI	GGATC	2 cut(s)	894, 1751
AlwNI	CAGNNNCTG	1 cut(s)	878
Ama87I	CYCGRG	1 cut(s)	1458
Aor13HI	TCCGGA	1 cut(s)	240
AoxI	GGCC	6 cut(s)	271, 283, 314, 880, 1240, 1424
ApeKI	GCWGC	3 cut(s)	654, 828, 1661
ApoI	RAATTY	5 cut(s)	163, 188, 290, 607, 1557
ArsI	GACNNNNNNTTYG	2 cut(s)	41, 73
AsiSI	GCGATCGC	1 cut(s)	439
AspLEI	GCGC	2 cut(s)	639, 833
AspS9I	GGNCC	4 cut(s)	272, 1020, 1084, 1175
AsuHPI	GGTGA	3 cut(s)	585, 857, 932
AsuII	TTCGAA	2 cut(s)	382, 898
AvaI	CYCGRG	1 cut(s)	1458
AvaII	GGWCC	3 cut(s)	1020, 1084, 1175
AxyI	CCTNAGG	1 cut(s)	228
BalI	TGGCCA	3 cut(s)	285, 882, 1242
BanI	GGYRCC	1 cut(s)	1648
BanII	GRGCYC	1 cut(s)	1095
BauI	CACGAG	1 cut(s)	1122
BbsI	GAAGAC	2 cut(s)	177, 944
Bbv12I	GWGCWC	2 cut(s)	1095, 1115
BbvI	GCAGC	3 cut(s)	641, 815, 1648
BccI	CCATC	4 cut(s)	106, 111, 920, 1661
BciT130I	CCWGG	6 cut(s)	183, 659, 884, 1088, 1376, 1489
BclI	TGATCA	1 cut(s)	1393
BcoDI	GTCTC	2 cut(s)	1028, 1469
BfaI	CTAG	4 cut(s)	29, 492, 854, 1578
BfuAI	ACCTGC	1 cut(s)	666
BglII	AGATCT	2 cut(s)	496, 1510
BisI	GCNGC	3 cut(s)	655, 829, 1662
BlsI	GCNGC	3 cut(s)	656, 830, 1663
Bme1390I	CCNGG	6 cut(s)	183, 659, 884, 1088, 1376, 1489
Bme18I	GGWCC	3 cut(s)	1020, 1084, 1175
BmeT110I	CYCGRG	1 cut(s)	1458
BmgT120I	GGNCC	4 cut(s)	272, 1020, 1084, 1175
BmiI	GGNNCC	2 cut(s)	421, 1650
BmrFI	CCNGG	6 cut(s)	183, 659, 884, 1088, 1376, 1489
BmsI	GCATC	4 cut(s)	311, 491, 700, 865
BoxI	GACNNNNGTC	1 cut(s)	177
BpiI	GAAGAC	2 cut(s)	177, 944
BpmI	CTGGAG	3 cut(s)	1109, 1626, 1739
Bpu10I	CCTNAGC	2 cut(s)	650, 1493
Bpu14I	TTCGAA	2 cut(s)	382, 898
Bsa29I	ATCGAT	1 cut(s)	508
BsaI	GGTCTC	1 cut(s)	1469
BsaJI	CCNNGG	3 cut(s)	182, 275, 1243
BsaWI	WCCGGW	3 cut(s)	100, 240, 1589
Bsc4I	CCNNNNNNNGG	4 cut(s)	182, 281, 878, 1494
Bse1I	ACTGG	3 cut(s)	557, 623, 1609
Bse21I	CCTNAGG	1 cut(s)	228
BseAI	TCCGGA	1 cut(s)	240
BseBI	CCWGG	6 cut(s)	183, 659, 884, 1088, 1376, 1489
BseCI	ATCGAT	1 cut(s)	508
BseDI	CCNNGG	3 cut(s)	182, 275, 1243
BseGI	GGATG	3 cut(s)	122, 635, 715
BseLI	CCNNNNNNNGG	4 cut(s)	182, 281, 878, 1494
BseMII	CTCAG	1 cut(s)	219
BseNI	ACTGG	3 cut(s)	557, 623, 1609
BseRI	GAGGAG	2 cut(s)	1457, 1608
BseXI	GCAGC	3 cut(s)	641, 815, 1648
Bsh1236I	CGCG	1 cut(s)	435
Bsh1285I	CGRYCG	1 cut(s)	439
BshFI	GGCC	6 cut(s)	273, 285, 316, 882, 1242, 1426
BshNI	GGYRCC	1 cut(s)	1648
BshVI	ATCGAT	1 cut(s)	508
BsiEI	CGRYCG	1 cut(s)	439
BsiHKAI	GWGCWC	2 cut(s)	1095, 1115
BsiHKCI	CYCGRG	1 cut(s)	1458
BsiSI	CCGG	4 cut(s)	101, 241, 707, 1590
BslFI	GGGAC	3 cut(s)	134, 1204, 1645
BslI	CCNNNNNNNGG	4 cut(s)	182, 281, 878, 1494
BsmAI	GTCTC	2 cut(s)	1028, 1469
BsmFI	GGGAC	3 cut(s)	134, 1204, 1645
BsmI	GAATGC	2 cut(s)	758, 990
BsnI	GGCC	6 cut(s)	273, 285, 316, 882, 1242, 1426
Bso31I	GGTCTC	1 cut(s)	1469
BsoBI	CYCGRG	1 cut(s)	1458
Bsp119I	TTCGAA	2 cut(s)	382, 898
Bsp1286I	GDGCHC	2 cut(s)	1095, 1115
Bsp13I	TCCGGA	1 cut(s)	240
Bsp1407I	TGTACA	1 cut(s)	372
Bsp19I	CCATGG	1 cut(s)	275
BspANI	GGCC	6 cut(s)	273, 285, 316, 882, 1242, 1426
BspCNI	CTCAG	1 cut(s)	220
BspDI	ATCGAT	1 cut(s)	508
BspEI	TCCGGA	1 cut(s)	240
BspFNI	CGCG	1 cut(s)	435
BspHI	TCATGA	1 cut(s)	1260
BspLI	GGNNCC	2 cut(s)	421, 1650
BspMI	ACCTGC	1 cut(s)	666
BspPI	GGATC	2 cut(s)	894, 1751
BspT104I	TTCGAA	2 cut(s)	382, 898
BspT107I	GGYRCC	1 cut(s)	1648
BspTNI	GGTCTC	1 cut(s)	1469
BsrGI	TGTACA	1 cut(s)	372
BsrI	ACTGG	3 cut(s)	557, 623, 1609
BssECI	CCNNGG	3 cut(s)	182, 275, 1243
BssSI	CACGAG	1 cut(s)	1122
BssT1I	CCWWGG	2 cut(s)	275, 1243
Bst2BI	CACGAG	1 cut(s)	1122
Bst2UI	CCWGG	6 cut(s)	183, 659, 884, 1088, 1376, 1489
Bst4CI	ACNGT	3 cut(s)	554, 779, 1416
Bst6I	CTCTTC	2 cut(s)	1214, 1329
BstAUI	TGTACA	1 cut(s)	372
BstBI	TTCGAA	2 cut(s)	382, 898
BstC8I	GCNNGC	2 cut(s)	880, 1328
BstDEI	CTNAG	7 cut(s)	228, 311, 588, 650, 991, 1493, 1617
BstDSI	CCRYGG	1 cut(s)	275
BstF5I	GGATG	3 cut(s)	122, 635, 715
BstFNI	CGCG	1 cut(s)	435
BstHHI	GCGC	2 cut(s)	639, 833
BstMAI	GTCTC	2 cut(s)	1028, 1469
BstMCI	CGRYCG	1 cut(s)	439
BstMWI	GCNNNNNNNGC	1 cut(s)	1239
BstNI	CCWGG	6 cut(s)	183, 659, 884, 1088, 1376, 1489
BstNSI	RCATGY	2 cut(s)	373, 1363
BstPAI	GACNNNNGTC	1 cut(s)	177
BstSCI	CCNGG	6 cut(s)	181, 657, 882, 1086, 1374, 1487
BstUI	CGCG	1 cut(s)	435
BstV1I	GCAGC	3 cut(s)	641, 815, 1648
BstV2I	GAAGAC	2 cut(s)	177, 944
BstX2I	RGATCY	3 cut(s)	496, 886, 1510
BstXI	CCANNNNNNTGG	1 cut(s)	603
BstYI	RGATCY	3 cut(s)	496, 886, 1510
Bsu15I	ATCGAT	1 cut(s)	508
Bsu36I	CCTNAGG	1 cut(s)	228
BsuRI	GGCC	6 cut(s)	273, 285, 316, 882, 1242, 1426
BsuTUI	ATCGAT	1 cut(s)	508
BtgI	CCRYGG	1 cut(s)	275
BtsCI	GGATG	3 cut(s)	122, 635, 715
BtsIMutI	CAGTG	1 cut(s)	301
BveI	ACCTGC	1 cut(s)	666
Cac8I	GCNNGC	2 cut(s)	880, 1328
CaiI	CAGNNNCTG	1 cut(s)	878
CciI	TCATGA	1 cut(s)	1260
CfoI	GCGC	2 cut(s)	639, 833
Cfr13I	GGNCC	4 cut(s)	272, 1020, 1084, 1175
ClaI	ATCGAT	1 cut(s)	508
Csp6I	GTAC	5 cut(s)	5, 364, 373, 488, 1073
CspCI	CAANNNNNGTGG	2 cut(s)	1427, 1462
CviQI	GTAC	5 cut(s)	5, 364, 373, 488, 1073
DdeI	CTNAG	7 cut(s)	228, 311, 588, 650, 991, 1493, 1617
DrdI	GACNNNNNNGTC	1 cut(s)	619
DseDI	GACNNNNNNGTC	1 cut(s)	619
EaeI	YGGCCR	3 cut(s)	283, 880, 1240
Eam1104I	CTCTTC	2 cut(s)	1214, 1329
EarI	CTCTTC	2 cut(s)	1214, 1329
Ecl136II	GAGCTC	1 cut(s)	1093
Eco130I	CCWWGG	2 cut(s)	275, 1243
Eco147I	AGGCCT	1 cut(s)	316
Eco24I	GRGCYC	1 cut(s)	1095
Eco31I	GGTCTC	1 cut(s)	1469
Eco32I	GATATC	2 cut(s)	808, 859
Eco47I	GGWCC	3 cut(s)	1020, 1084, 1175
Eco53kI	GAGCTC	1 cut(s)	1093
Eco57I	CTGAAG	3 cut(s)	894, 1079, 1274
Eco81I	CCTNAGG	1 cut(s)	228
Eco88I	CYCGRG	1 cut(s)	1458
EcoICRI	GAGCTC	1 cut(s)	1093
EcoO109I	RGGNCCY	1 cut(s)	1084
EcoRI	GAATTC	3 cut(s)	188, 290, 607
EcoRII	CCWGG	6 cut(s)	181, 657, 882, 1086, 1374, 1487
EcoRV	GATATC	2 cut(s)	808, 859
EcoT14I	CCWWGG	2 cut(s)	275, 1243
EcoT22I	ATGCAT	2 cut(s)	223, 484
EcoT38I	GRGCYC	1 cut(s)	1095
ErhI	CCWWGG	2 cut(s)	275, 1243
FaqI	GGGAC	3 cut(s)	134, 1204, 1645
FauNDI	CATATG	1 cut(s)	1636
FbaI	TGATCA	1 cut(s)	1393
FblI	GTMKAC	2 cut(s)	571, 1008
Fnu4HI	GCNGC	3 cut(s)	655, 829, 1662
FokI	GGATG	3 cut(s)	129, 642, 722
FriOI	GRGCYC	1 cut(s)	1095
Fsp4HI	GCNGC	3 cut(s)	655, 829, 1662
FspBI	CTAG	4 cut(s)	29, 492, 854, 1578
FspI	TGCGCA	1 cut(s)	638
GlaI	GCGC	2 cut(s)	638, 832
GluI	GCNGC	3 cut(s)	655, 829, 1662
GsuI	CTGGAG	3 cut(s)	1109, 1626, 1739
HaeIII	GGCC	6 cut(s)	273, 285, 316, 882, 1242, 1426
HapII	CCGG	4 cut(s)	101, 241, 707, 1590
HhaI	GCGC	2 cut(s)	639, 833
Hin6I	GCGC	2 cut(s)	637, 831
HinP1I	GCGC	2 cut(s)	637, 831
HindIII	AAGCTT	4 cut(s)	70, 799, 866, 1154
HinfI	GANTC	5 cut(s)	17, 579, 1312, 1484, 1549
HpaII	CCGG	4 cut(s)	101, 241, 707, 1590
HphI	GGTGA	3 cut(s)	585, 857, 932
Hpy166II	GTNNAC	6 cut(s)	364, 572, 730, 1009, 1183, 1733
Hpy188III	TCNNGA	8 cut(s)	21, 241, 872, 981, 1096, 1261, 1630, 1760
Hpy8I	GTNNAC	6 cut(s)	364, 572, 730, 1009, 1183, 1733
HpyAV	CCTTC	2 cut(s)	93, 1157
HpyCH4III	ACNGT	3 cut(s)	554, 779, 1416
HpyCH4IV	ACGT	3 cut(s)	259, 1005, 1432
HpyCH4V	TGCA	7 cut(s)	221, 302, 482, 533, 756, 1127, 1330
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1239
HpyF3I	CTNAG	7 cut(s)	228, 311, 588, 650, 991, 1493, 1617
HpySE526I	ACGT	3 cut(s)	259, 1005, 1432
HspAI	GCGC	2 cut(s)	637, 831
Kpn2I	TCCGGA	1 cut(s)	240
Ksp22I	TGATCA	1 cut(s)	1393
LmnI	GCTCC	3 cut(s)	524, 1090, 1098
Lsp1109I	GCAGC	3 cut(s)	641, 815, 1648
LweI	GCATC	4 cut(s)	311, 491, 700, 865
MaeI	CTAG	4 cut(s)	29, 492, 854, 1578
MaeII	ACGT	3 cut(s)	259, 1005, 1432
MaeIII	GTNAC	5 cut(s)	43, 96, 548, 591, 621
MflI	RGATCY	3 cut(s)	496, 886, 1510
MhlI	GDGCHC	2 cut(s)	1095, 1115
MlsI	TGGCCA	3 cut(s)	285, 882, 1242
MluNI	TGGCCA	3 cut(s)	285, 882, 1242
MnlI	CCTC	9 cut(s)	223, 465, 527, 812, 1075, 1215, 1478, 1586, 1601
Mox20I	TGGCCA	3 cut(s)	285, 882, 1242
Mph1103I	ATGCAT	2 cut(s)	223, 484
MroI	TCCGGA	1 cut(s)	240
MscI	TGGCCA	3 cut(s)	285, 882, 1242
MseI	TTAA	5 cut(s)	138, 413, 1251, 1272, 1586
MslI	CAYNNNNRTG	2 cut(s)	628, 899
Msp20I	TGGCCA	3 cut(s)	285, 882, 1242
MspI	CCGG	4 cut(s)	101, 241, 707, 1590
MspR9I	CCNGG	6 cut(s)	183, 659, 884, 1088, 1376, 1489
Mva1269I	GAATGC	2 cut(s)	758, 990
MvaI	CCWGG	6 cut(s)	183, 659, 884, 1088, 1376, 1489
MvnI	CGCG	1 cut(s)	435
MwoI	GCNNNNNNNGC	1 cut(s)	1239
NcoI	CCATGG	1 cut(s)	275
NdeI	CATATG	1 cut(s)	1636
NlaIV	GGNNCC	2 cut(s)	421, 1650
NmuCI	GTSAC	4 cut(s)	43, 548, 591, 621
NsbI	TGCGCA	1 cut(s)	638
NsiI	ATGCAT	2 cut(s)	223, 484
NspI	RCATGY	2 cut(s)	373, 1363
NspV	TTCGAA	2 cut(s)	382, 898
PagI	TCATGA	1 cut(s)	1260
PceI	AGGCCT	1 cut(s)	316
PciI	ACATGT	1 cut(s)	369
PctI	GAATGC	2 cut(s)	758, 990
PfeI	GAWTC	5 cut(s)	17, 579, 1312, 1484, 1549
PflMI	CCANNNNNTGG	2 cut(s)	281, 878
PkrI	GCNGC	3 cut(s)	656, 830, 1663
Ple19I	CGATCG	1 cut(s)	439
PpuMI	RGGWCCY	1 cut(s)	1084
PscI	ACATGT	1 cut(s)	369
PshAI	GACNNNNGTC	1 cut(s)	177
PsiI	TTATAA	1 cut(s)	1727
Psp124BI	GAGCTC	1 cut(s)	1095
Psp1406I	AACGTT	2 cut(s)	259, 1432
Psp5II	RGGWCCY	1 cut(s)	1084
Psp6I	CCWGG	6 cut(s)	181, 657, 882, 1086, 1374, 1487
PspGI	CCWGG	6 cut(s)	181, 657, 882, 1086, 1374, 1487
PspN4I	GGNNCC	2 cut(s)	421, 1650
PspPI	GGNCC	4 cut(s)	272, 1020, 1084, 1175
PspPPI	RGGWCCY	1 cut(s)	1084
PstNI	CAGNNNCTG	1 cut(s)	878
PsuI	RGATCY	3 cut(s)	496, 886, 1510
PvuI	CGATCG	1 cut(s)	439
RgaI	GCGATCGC	1 cut(s)	439
RsaI	GTAC	5 cut(s)	6, 365, 374, 489, 1074
RsaNI	GTAC	5 cut(s)	5, 364, 373, 488, 1073
RseI	CAYNNNNRTG	2 cut(s)	628, 899
SacI	GAGCTC	1 cut(s)	1095
SaqAI	TTAA	5 cut(s)	138, 413, 1251, 1272, 1586
SatI	GCNGC	3 cut(s)	655, 829, 1662
Sau96I	GGNCC	4 cut(s)	272, 1020, 1084, 1175
ScrFI	CCNGG	6 cut(s)	183, 659, 884, 1088, 1376, 1489
SduI	GDGCHC	2 cut(s)	1095, 1115
SfaAI	GCGATCGC	1 cut(s)	439
SfaNI	GCATC	4 cut(s)	311, 491, 700, 865
SfuI	TTCGAA	2 cut(s)	382, 898
SgfI	GCGATCGC	1 cut(s)	439
SinI	GGWCC	3 cut(s)	1020, 1084, 1175
SmiMI	CAYNNNNRTG	2 cut(s)	628, 899
SseBI	AGGCCT	1 cut(s)	316
SspI	AATATT	1 cut(s)	1584
SspMI	CTAG	4 cut(s)	29, 492, 854, 1578
SstI	GAGCTC	1 cut(s)	1095
StuI	AGGCCT	1 cut(s)	316
StyD4I	CCNGG	6 cut(s)	181, 657, 882, 1086, 1374, 1487
StyI	CCWWGG	2 cut(s)	275, 1243
TaaI	ACNGT	3 cut(s)	554, 779, 1416
TaiI	ACGT	3 cut(s)	262, 1008, 1435
TaqI	TCGA	7 cut(s)	75, 336, 382, 508, 565, 611, 898
TatI	WGTACW	2 cut(s)	363, 372
TfiI	GAWTC	5 cut(s)	17, 579, 1312, 1484, 1549
Tru1I	TTAA	5 cut(s)	138, 413, 1251, 1272, 1586
Tru9I	TTAA	5 cut(s)	138, 413, 1251, 1272, 1586
TscAI	CASTG	1 cut(s)	301
TseFI	GTSAC	4 cut(s)	43, 548, 591, 621
TseI	GCWGC	3 cut(s)	654, 828, 1661
Tsp45I	GTSAC	4 cut(s)	43, 548, 591, 621
TspGWI	ACGGA	1 cut(s)	1750
TspRI	CASTG	1 cut(s)	301
Van91I	CCANNNNNTGG	2 cut(s)	281, 878
VpaK11BI	GGWCC	3 cut(s)	1020, 1084, 1175
XapI	RAATTY	5 cut(s)	163, 188, 290, 607, 1557
XceI	RCATGY	2 cut(s)	373, 1363
XcmI	CCANNNNNNNNNTGG	4 cut(s)	293, 1372, 1445, 1778
XmiI	GTMKAC	2 cut(s)	571, 1008
XspI	CTAG	4 cut(s)	29, 492, 854, 1578
Zsp2I	ATGCAT	2 cut(s)	223, 484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.