FvH4_5g34301

Zinc-finger of C2H2 type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000176
Physical Location & Seq
Reverse (-)
24978491 .. 24980149
1659 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g34301.t1

Sequence Viewer

Length: 1584 bp
ATGGTGTACATTCTTCCGGCCAAATATGCTCTCCCTAAACCAAAGCCGGTGTTCATTCTTCCGGCCAAATATGCTCTCCCTGAACCAAAGCAGTTTTGCACTGCAAACGAGCTGGAAAAACCAGAAGGAGAGCAGACCATTCCTACCATAGAGCAAGAAGCAGAAAAGGTGGAAATCAACTCTGATTTGAAGAAGCTGTTCATGATGTTCTCTAAGCCTACTATGGCTATGTCAATGCACTTCAGACCCCTCTACGTCACAGCGAGGTTAAATGGTCAGAATGTCAACAAGATAATGGTAGCTCAAGGTACAGCAGAAAACATCATCACCCTTCGCACTATGACTTTACTCGGTATTCAGAAGACATCCATTATGAACACTACAATGAAAGTCAAGGACTTTGCAGGAAGCACCACCAAAACATTAGGGATAATCTTCTTGAAGGTTCAGCTTGGACCAGCAGAGGCAGTTCATTCTTTCTTTGTGGTTGAGTGCACTGGGCCATACAATGTGATATTGGGCAGAGACTGGATTCATCAAAGCTCTTGTATCCCTTCATCGTTGCATCAGGAGCTTCTGATGTGGAACCCGGTCACGGATGAGGCTGAACTTATCAAAGCAGATCCTAGACCTTTTTCAGTATCCGCGAATGCTAAAATGATTAGGGAAAATGGTTCGCCAAGTAGTCAGAAGAAAATTCAGAAGGAGTGGAGCTGTCCTCTTTGTCAAATTACCACCACAAGTGAAAATTGTTTGAAGATGCCCTTCCAAGGTAAGAAACATGCCTTGAAAATTAGCACAGCAAGTGAAGATTGTTTGAAGATGCACTTCCAAGGTAAGAAACATGCCTTGAAAGTAGAAGCACTACAAGGTGTAAAACAAGGTCCCATCAGTGAGTACAAATCCTCTGAGAAGCTGAAGAGGAGAACAAAAAGAAGGGTTTTACTTGATAACTACGACCCAATTGCTAGACCTAATCAGGAAAAGTGGAGCGACCTTCCTAGGTTGTGTGAATGGGAATGTCCTCTGGATGGATGGACAAGTAGATTGTGTAGATGGGAAAAGCCGCAGGTTGAATGGACAAAATTGAATACTGATGGATCGACTGAGCTAGGAAATGCTGGTATTGGGGGGCTATTTCGTAACTATAAGGGTGAACCAATATGTGCCTTTGTCAGTAAAGGTCTAGCAGATGATATTTTCATGGTTGAATTATGTGCTATATTGCGAGGCCTTGTTATTGCCTCTAGTCTCGGGATTAAATTATTATGGGTTGAGTCTGATTCATTGGCCGTTGTGAAGACAATTAATCGAGAACAGCCGCACAGTTCAAAGGCTTGTAGCATTTTGAAGAGTATCTGGAAAATTCTGAAGAAATTTGACAAGCACTGTGTATCACATACATGGCGTGAAACTAATAGGGCTGCTGATCATCTTGCAAAAATGGTTGTACCTAAGAGAGATGTTGTTTTTTGGCCGGATGATTTCCCTGATAGCCTTAATAGAATTATCAAGGAGGATGCTAAAGGCACGATATATTGTAGAGGCAAGATAGACTTGATTATAGACACGATATTTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 TB2_DP1_HVA22 zf-met

Protein Analysis

528

Amino Acids

59.58

Weight (kDa)

9.14

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 364 - 482 3.8e-27 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1060
AccII CGCG 1 cut(s) 647
AciI CCGC 3 cut(s) 645, 1067, 1322
AclWI GGATC 2 cut(s) 617, 1108
AcoI YGGCCR 4 cut(s) 18, 63, 1290, 1475
AcsI RAATTY 3 cut(s) 696, 1365, 1376
AcuI CTGAAG 3 cut(s) 226, 938, 1391
AfaI GTAC 4 cut(s) 8, 310, 899, 1452
AfiI CCNNNNNNNGG 3 cut(s) 595, 770, 1031
AluBI AGCT 9 cut(s) 112, 196, 302, 451, 543, 574, 714, 916, 1111
AluI AGCT 9 cut(s) 112, 196, 302, 451, 543, 574, 714, 916, 1111
Alw21I GWGCWC 1 cut(s) 497
Alw26I GTCTC 2 cut(s) 519, 1256
Alw44I GTGCAC 1 cut(s) 493
AlwI GGATC 2 cut(s) 617, 1108
AlwNI CAGNNNCTG 1 cut(s) 528
Ama87I CYCGRG 1 cut(s) 1253
AoxI GGCC 6 cut(s) 18, 63, 500, 1231, 1290, 1475
ApaLI GTGCAC 1 cut(s) 493
ApeKI GCWGC 1 cut(s) 1424
ApoI RAATTY 3 cut(s) 696, 1365, 1376
AseI ATTAAT 1 cut(s) 1308
Asp700I GAANNNNTTC 1 cut(s) 197
AspA2I CCTAGG 1 cut(s) 1001
AspS9I GGNCC 3 cut(s) 455, 500, 884
AsuC2I CCSGG 1 cut(s) 590
AsuHPI GGTGA 2 cut(s) 319, 1166
AvaI CYCGRG 1 cut(s) 1253
AvaII GGWCC 2 cut(s) 455, 884
AvrII CCTAGG 1 cut(s) 1001
BaeGI GKGCMC 1 cut(s) 497
BbsI GAAGAC 2 cut(s) 368, 1307
Bbv12I GWGCWC 1 cut(s) 497
BbvI GCAGC 1 cut(s) 1411
BccI CCATC 5 cut(s) 896, 1025, 1029, 1050, 1091
BceAI ACGGC 1 cut(s) 1277
BcgI CGANNNNNNTGC 2 cut(s) 947, 981
BciVI GTATCC 2 cut(s) 560, 652
BclI TGATCA 1 cut(s) 1429
BcnI CCSGG 1 cut(s) 590
BcoDI GTCTC 2 cut(s) 519, 1256
BfaI CTAG 6 cut(s) 627, 969, 1002, 1112, 1187, 1248
BfuAI ACCTGC 1 cut(s) 1060
BfuI GTATCC 2 cut(s) 560, 652
BisI GCNGC 3 cut(s) 1067, 1322, 1425
BlnI CCTAGG 1 cut(s) 1001
BlsI GCNGC 3 cut(s) 1068, 1323, 1426
Bme1390I CCNGG 1 cut(s) 590
Bme18I GGWCC 2 cut(s) 455, 884
BmeT110I CYCGRG 1 cut(s) 1253
BmgT120I GGNCC 3 cut(s) 455, 500, 884
BmiI GGNNCC 2 cut(s) 587, 886
BmrFI CCNGG 1 cut(s) 590
BmrI ACTGGG 1 cut(s) 507
BmsI GCATC 4 cut(s) 574, 750, 813, 1510
BmuI ACTGGG 1 cut(s) 507
BpiI GAAGAC 2 cut(s) 368, 1307
BplI GAGNNNNNCTC 2 cut(s) 703, 735
BpuEI CTTGAG 1 cut(s) 288
BpuMI CCSGG 1 cut(s) 590
BsaJI CCNNGG 3 cut(s) 769, 832, 1001
Bsc4I CCNNNNNNNGG 3 cut(s) 595, 770, 1031
Bse118I RCCGGY 1 cut(s) 46
Bse1I ACTGG 2 cut(s) 502, 533
BseDI CCNNGG 3 cut(s) 769, 832, 1001
BseGI GGATG 6 cut(s) 365, 604, 1036, 1040, 1486, 1525
BseLI CCNNNNNNNGG 3 cut(s) 595, 770, 1031
BseMII CTCAG 2 cut(s) 900, 1098
BseNI ACTGG 2 cut(s) 502, 533
BseRI GAGGAG 1 cut(s) 937
BseSI GKGCMC 1 cut(s) 497
BseXI GCAGC 1 cut(s) 1411
Bsh1236I CGCG 1 cut(s) 647
BshFI GGCC 6 cut(s) 20, 65, 502, 1233, 1292, 1477
BsiHKAI GWGCWC 1 cut(s) 497
BsiHKCI CYCGRG 1 cut(s) 1253
BsiSI CCGG 5 cut(s) 17, 47, 62, 590, 1478
BslFI GGGAC 1 cut(s) 870
BslI CCNNNNNNNGG 3 cut(s) 595, 770, 1031
BsmAI GTCTC 2 cut(s) 519, 1256
BsmFI GGGAC 1 cut(s) 870
BsmI GAATGC 1 cut(s) 655
BsnI GGCC 6 cut(s) 20, 65, 502, 1233, 1292, 1477
BsoBI CYCGRG 1 cut(s) 1253
Bsp1286I GDGCHC 1 cut(s) 497
Bsp1407I TGTACA 1 cut(s) 6
Bsp143I GATC 3 cut(s) 622, 1100, 1429
BspACI CCGC 3 cut(s) 645, 1067, 1322
BspANI GGCC 6 cut(s) 20, 65, 502, 1233, 1292, 1477
BspCNI CTCAG 2 cut(s) 901, 1099
BspFNI CGCG 1 cut(s) 647
BspHI TCATGA 1 cut(s) 201
BspLI GGNNCC 2 cut(s) 587, 886
BspMI ACCTGC 1 cut(s) 1060
BspPI GGATC 2 cut(s) 617, 1108
BsrFI RCCGGY 1 cut(s) 46
BsrGI TGTACA 1 cut(s) 6
BsrI ACTGG 2 cut(s) 502, 533
BssAI RCCGGY 1 cut(s) 46
BssECI CCNNGG 3 cut(s) 769, 832, 1001
BssMI GATC 3 cut(s) 622, 1100, 1429
BssT1I CCWWGG 3 cut(s) 769, 832, 1001
Bst4CI ACNGT 2 cut(s) 1328, 1391
Bst6I CTCTTC 2 cut(s) 914, 1346
BstAUI TGTACA 1 cut(s) 6
BstDEI CTNAG 4 cut(s) 213, 909, 1107, 1455
BstF5I GGATG 6 cut(s) 365, 604, 1036, 1040, 1486, 1525
BstFNI CGCG 1 cut(s) 647
BstKTI GATC 3 cut(s) 625, 1103, 1432
BstMAI GTCTC 2 cut(s) 519, 1256
BstMBI GATC 3 cut(s) 622, 1100, 1429
BstMWI GCNNNNNNNGC 3 cut(s) 26, 71, 571
BstNSI RCATGY 2 cut(s) 785, 848
BstSCI CCNGG 1 cut(s) 588
BstSLI GKGCMC 1 cut(s) 497
BstUI CGCG 1 cut(s) 647
BstV1I GCAGC 1 cut(s) 1411
BstV2I GAAGAC 2 cut(s) 368, 1307
BstX2I RGATCY 1 cut(s) 622
BstYI RGATCY 1 cut(s) 622
BsuI GTATCC 2 cut(s) 560, 652
BsuRI GGCC 6 cut(s) 20, 65, 502, 1233, 1292, 1477
BtsCI GGATG 6 cut(s) 365, 604, 1036, 1040, 1486, 1525
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 4 cut(s) 99, 495, 898, 1387
BveI ACCTGC 1 cut(s) 1060
CaiI CAGNNNCTG 1 cut(s) 528
CciI TCATGA 1 cut(s) 201
Cfr10I RCCGGY 1 cut(s) 46
Cfr13I GGNCC 3 cut(s) 455, 500, 884
Csp6I GTAC 4 cut(s) 7, 309, 898, 1451
CviAII CATG 5 cut(s) 202, 782, 845, 1204, 1404
CviQI GTAC 4 cut(s) 7, 309, 898, 1451
DdeI CTNAG 4 cut(s) 213, 909, 1107, 1455
DpnI GATC 3 cut(s) 624, 1102, 1431
DpnII GATC 3 cut(s) 622, 1100, 1429
EaeI YGGCCR 4 cut(s) 18, 63, 1290, 1475
Eam1104I CTCTTC 2 cut(s) 914, 1346
EarI CTCTTC 2 cut(s) 914, 1346
Eco130I CCWWGG 3 cut(s) 769, 832, 1001
Eco147I AGGCCT 1 cut(s) 1233
Eco47I GGWCC 2 cut(s) 455, 884
Eco57I CTGAAG 3 cut(s) 226, 938, 1391
Eco88I CYCGRG 1 cut(s) 1253
EcoO109I RGGNCCY 1 cut(s) 884
EcoT14I CCWWGG 3 cut(s) 769, 832, 1001
ErhI CCWWGG 3 cut(s) 769, 832, 1001
FaeI CATG 5 cut(s) 205, 785, 848, 1207, 1407
FalI AAGNNNNNCTT 6 cut(s) 749, 781, 812, 844, 1541, 1573
FaqI GGGAC 1 cut(s) 870
FatI CATG 5 cut(s) 201, 781, 844, 1203, 1403
FbaI TGATCA 1 cut(s) 1429
Fnu4HI GCNGC 3 cut(s) 1067, 1322, 1425
FokI GGATG 6 cut(s) 352, 611, 1043, 1047, 1493, 1532
Fsp4HI GCNGC 3 cut(s) 1067, 1322, 1425
FspBI CTAG 6 cut(s) 627, 969, 1002, 1112, 1187, 1248
GluI GCNGC 3 cut(s) 1067, 1322, 1425
HaeIII GGCC 6 cut(s) 20, 65, 502, 1233, 1292, 1477
HapII CCGG 5 cut(s) 17, 47, 62, 590, 1478
Hin1II CATG 5 cut(s) 205, 785, 848, 1207, 1407
HincII GTYRAC 1 cut(s) 286
HindII GTYRAC 1 cut(s) 286
HinfI GANTC 3 cut(s) 532, 1277, 1283
HpaII CCGG 5 cut(s) 17, 47, 62, 590, 1478
HphI GGTGA 2 cut(s) 319, 1166
Hpy166II GTNNAC 4 cut(s) 7, 286, 495, 1157
Hpy188III TCNNGA 8 cut(s) 202, 439, 569, 980, 1028, 1255, 1313, 1360
Hpy8I GTNNAC 4 cut(s) 7, 286, 495, 1157
HpyAV CCTTC 8 cut(s) 119, 341, 436, 564, 697, 775, 930, 1007
HpyCH4III ACNGT 2 cut(s) 1328, 1391
HpyCH4IV ACGT 1 cut(s) 255
HpyCH4V TGCA 8 cut(s) 99, 104, 238, 404, 495, 565, 826, 1439
HpyF10VI GCNNNNNNNGC 3 cut(s) 26, 71, 571
HpyF3I CTNAG 4 cut(s) 213, 909, 1107, 1455
HpySE526I ACGT 1 cut(s) 255
Hsp92II CATG 5 cut(s) 205, 785, 848, 1207, 1407
Ksp22I TGATCA 1 cut(s) 1429
Kzo9I GATC 3 cut(s) 622, 1100, 1429
LmnI GCTCC 3 cut(s) 571, 711, 990
Lsp1109I GCAGC 1 cut(s) 1411
LweI GCATC 4 cut(s) 574, 750, 813, 1510
MaeI CTAG 6 cut(s) 627, 969, 1002, 1112, 1187, 1248
MaeII ACGT 1 cut(s) 255
MaeIII GTNAC 3 cut(s) 256, 592, 1142
MalI GATC 3 cut(s) 624, 1102, 1431
MboI GATC 3 cut(s) 622, 1100, 1429
MfeI CAATTG 1 cut(s) 963
MflI RGATCY 1 cut(s) 622
MhlI GDGCHC 1 cut(s) 497
MlyI GAGTC 1 cut(s) 1286
MroXI GAANNNNTTC 1 cut(s) 197
MseI TTAA 5 cut(s) 269, 1260, 1308, 1500, 1582
MslI CAYNNNNRTG 2 cut(s) 383, 1402
MspI CCGG 5 cut(s) 17, 47, 62, 590, 1478
MspR9I CCNGG 1 cut(s) 590
MunI CAATTG 1 cut(s) 963
Mva1269I GAATGC 1 cut(s) 655
MvnI CGCG 1 cut(s) 647
MwoI GCNNNNNNNGC 3 cut(s) 26, 71, 571
NciI CCSGG 1 cut(s) 590
NdeII GATC 3 cut(s) 622, 1100, 1429
NlaIII CATG 5 cut(s) 205, 785, 848, 1207, 1407
NlaIV GGNNCC 2 cut(s) 587, 886
NmuCI GTSAC 2 cut(s) 256, 592
NspI RCATGY 2 cut(s) 785, 848
PagI TCATGA 1 cut(s) 201
PceI AGGCCT 1 cut(s) 1233
PctI GAATGC 1 cut(s) 655
PdmI GAANNNNTTC 1 cut(s) 197
PfeI GAWTC 2 cut(s) 532, 1283
PkrI GCNGC 3 cut(s) 1068, 1323, 1426
PleI GAGTC 1 cut(s) 1285
PpsI GAGTC 1 cut(s) 1285
PpuMI RGGWCCY 1 cut(s) 884
PshBI ATTAAT 1 cut(s) 1308
Psp5II RGGWCCY 1 cut(s) 884
PspN4I GGNNCC 2 cut(s) 587, 886
PspPI GGNCC 3 cut(s) 455, 500, 884
PspPPI RGGWCCY 1 cut(s) 884
PstNI CAGNNNCTG 1 cut(s) 528
PsuI RGATCY 1 cut(s) 622
RsaI GTAC 4 cut(s) 8, 310, 899, 1452
RsaNI GTAC 4 cut(s) 7, 309, 898, 1451
RseI CAYNNNNRTG 2 cut(s) 383, 1402
SaqAI TTAA 5 cut(s) 269, 1260, 1308, 1500, 1582
SatI GCNGC 3 cut(s) 1067, 1322, 1425
Sau3AI GATC 3 cut(s) 622, 1100, 1429
Sau96I GGNCC 3 cut(s) 455, 500, 884
SchI GAGTC 1 cut(s) 1286
ScrFI CCNGG 1 cut(s) 590
SduI GDGCHC 1 cut(s) 497
SfaNI GCATC 4 cut(s) 574, 750, 813, 1510
SinI GGWCC 2 cut(s) 455, 884
SmiMI CAYNNNNRTG 2 cut(s) 383, 1402
SmlI CTYRAG 1 cut(s) 303
SmoI CTYRAG 1 cut(s) 303
SseBI AGGCCT 1 cut(s) 1233
SsiI CCGC 3 cut(s) 645, 1067, 1322
SspMI CTAG 6 cut(s) 627, 969, 1002, 1112, 1187, 1248
StuI AGGCCT 1 cut(s) 1233
StyD4I CCNGG 1 cut(s) 588
StyI CCWWGG 3 cut(s) 769, 832, 1001
TaaI ACNGT 2 cut(s) 1328, 1391
TaiI ACGT 1 cut(s) 258
TaqI TCGA 2 cut(s) 1103, 1312
TatI WGTACW 2 cut(s) 6, 897
TauI GCSGC 2 cut(s) 1069, 1324
TfiI GAWTC 2 cut(s) 532, 1283
Tru1I TTAA 5 cut(s) 269, 1260, 1308, 1500, 1582
Tru9I TTAA 5 cut(s) 269, 1260, 1308, 1500, 1582
TscAI CASTG 4 cut(s) 106, 502, 898, 1394
TseFI GTSAC 2 cut(s) 256, 592
TseI GCWGC 1 cut(s) 1424
Tsp45I GTSAC 2 cut(s) 256, 592
TspDTI ATGAA 9 cut(s) 43, 190, 389, 401, 461, 524, 546, 1192, 1275
TspGWI ACGGA 1 cut(s) 611
TspRI CASTG 4 cut(s) 106, 502, 898, 1394
VneI GTGCAC 1 cut(s) 493
VpaK11BI GGWCC 2 cut(s) 455, 884
VspI ATTAAT 1 cut(s) 1308
XapI RAATTY 3 cut(s) 696, 1365, 1376
XceI RCATGY 2 cut(s) 785, 848
XmaJI CCTAGG 1 cut(s) 1001
XmnI GAANNNNTTC 1 cut(s) 197
XspI CTAG 6 cut(s) 627, 969, 1002, 1112, 1187, 1248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.