Rmu_co7975030.1_g000001

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7975030.1
Physical Location & Seq
Forward (+)
1 .. 511
511 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co7975030.1_g000001.1.cds

Sequence Viewer

Length: 457 bp
gttgtcatcgtacttagtggaaagagaggcctacatgcatgtcgcgactttggagtacgtcaacgaggatttttctgaccatgaagaggaagaggaagaaattaaactagccccagcggcactagacgatacacctccaaaggtcagagaccttattgagaaagtcaacctggggtcatctagtgaacccttggaagtggctatcagctccaacttagagcctagtgagaaaaagaggcttatcgatctactatttgaatataaggactgtttcgcagagatatatgaagacatgccagacctgtcaccagatttggtttgccacaagctaccaacattgcctgacaagaggcctgtgaaacaagaaccgcgaaggatgaactcggagacccaagtactagttaaagaggaggttgaaaagatgcacaagtcaggtattattagggtggccaagtac
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

152

Amino Acids

17.53

Weight (kDa)

4.71

Isoelectric Point (pI)

78.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 45, 371
AciI CCGC 2 cut(s) 117, 369
AcoI YGGCCR 1 cut(s) 448
AfaI GTAC 4 cut(s) 12, 57, 397, 456
AfiI CCNNNNNNNGG 1 cut(s) 86
AgsI TTSAA 2 cut(s) 258, 417
AhlI ACTAGT 1 cut(s) 398
AjnI CCWGG 1 cut(s) 169
AluBI AGCT 2 cut(s) 208, 329
AluI AGCT 2 cut(s) 208, 329
Alw26I GTCTC 2 cut(s) 142, 381
AoxI GGCC 3 cut(s) 28, 351, 448
AsuHPI GGTGA 1 cut(s) 298
BalI TGGCCA 1 cut(s) 450
BbsI GAAGAC 1 cut(s) 295
BciT130I CCWGG 1 cut(s) 171
BcoDI GTCTC 2 cut(s) 142, 381
BcuI ACTAGT 1 cut(s) 398
BfaI CTAG 5 cut(s) 108, 123, 181, 223, 399
BglI GCCNNNNNGGC 1 cut(s) 117
BisI GCNGC 1 cut(s) 118
BlsI GCNGC 1 cut(s) 119
BmcAI AGTACT 1 cut(s) 397
Bme1390I CCNGG 1 cut(s) 171
BmrFI CCNGG 1 cut(s) 171
BmsI GCATC 1 cut(s) 412
BpiI GAAGAC 1 cut(s) 295
Bsa29I ATCGAT 1 cut(s) 244
BsaI GGTCTC 2 cut(s) 142, 381
BsaJI CCNNGG 2 cut(s) 170, 190
Bsc4I CCNNNNNNNGG 1 cut(s) 86
Bse3DI GCAATG 1 cut(s) 336
BseBI CCWGG 1 cut(s) 171
BseCI ATCGAT 1 cut(s) 244
BseDI CCNNGG 2 cut(s) 170, 190
BseGI GGATG 1 cut(s) 382
BseLI CCNNNNNNNGG 1 cut(s) 86
BseMI GCAATG 1 cut(s) 336
BseRI GAGGAG 1 cut(s) 423
BseYI CCCAGC 1 cut(s) 113
Bsh1236I CGCG 2 cut(s) 45, 371
BshFI GGCC 3 cut(s) 30, 353, 450
BshVI ATCGAT 1 cut(s) 244
BslI CCNNNNNNNGG 1 cut(s) 86
BsmAI GTCTC 2 cut(s) 142, 381
BsnI GGCC 3 cut(s) 30, 353, 450
Bso31I GGTCTC 2 cut(s) 142, 381
Bsp143I GATC 1 cut(s) 245
Bsp68I TCGCGA 1 cut(s) 45
BspACI CCGC 2 cut(s) 117, 369
BspANI GGCC 3 cut(s) 30, 353, 450
BspDI ATCGAT 1 cut(s) 244
BspFNI CGCG 2 cut(s) 45, 371
BspTNI GGTCTC 2 cut(s) 142, 381
BsrDI GCAATG 1 cut(s) 336
BssECI CCNNGG 2 cut(s) 170, 190
BssMI GATC 1 cut(s) 245
BssT1I CCWWGG 1 cut(s) 190
Bst2UI CCWGG 1 cut(s) 171
Bst4CI ACNGT 1 cut(s) 270
Bst6I CTCTTC 2 cut(s) 79, 85
BstDEI CTNAG 2 cut(s) 14, 215
BstF5I GGATG 1 cut(s) 382
BstFNI CGCG 2 cut(s) 45, 371
BstKTI GATC 1 cut(s) 248
BstMAI GTCTC 2 cut(s) 142, 381
BstMBI GATC 1 cut(s) 245
BstMWI GCNNNNNNNGC 1 cut(s) 117
BstNI CCWGG 1 cut(s) 171
BstNSI RCATGY 3 cut(s) 38, 42, 296
BstSCI CCNGG 1 cut(s) 169
BstUI CGCG 2 cut(s) 45, 371
BstV2I GAAGAC 1 cut(s) 295
Bsu15I ATCGAT 1 cut(s) 244
BsuRI GGCC 3 cut(s) 30, 353, 450
BsuTUI ATCGAT 1 cut(s) 244
BtsCI GGATG 1 cut(s) 382
BtuMI TCGCGA 1 cut(s) 45
ClaI ATCGAT 1 cut(s) 244
Csp6I GTAC 4 cut(s) 11, 56, 396, 455
CviAII CATG 4 cut(s) 35, 39, 81, 293
CviJI RGCY 9 cut(s) 30, 111, 201, 208, 221, 239, 329, 353, 450
CviKI_1 RGCY 9 cut(s) 30, 111, 201, 208, 221, 239, 329, 353, 450
CviQI GTAC 4 cut(s) 11, 56, 396, 455
DdeI CTNAG 2 cut(s) 14, 215
DpnI GATC 1 cut(s) 247
DpnII GATC 1 cut(s) 245
EaeI YGGCCR 1 cut(s) 448
Eam1104I CTCTTC 2 cut(s) 79, 85
EarI CTCTTC 2 cut(s) 79, 85
Eco130I CCWWGG 1 cut(s) 190
Eco147I AGGCCT 2 cut(s) 30, 353
Eco31I GGTCTC 2 cut(s) 142, 381
EcoRII CCWGG 1 cut(s) 169
EcoT14I CCWWGG 1 cut(s) 190
EcoT22I ATGCAT 1 cut(s) 40
ErhI CCWWGG 1 cut(s) 190
FaeI CATG 4 cut(s) 38, 42, 84, 296
FaiI YATR 7 cut(s) 36, 40, 82, 262, 284, 286, 294
FatI CATG 4 cut(s) 34, 38, 80, 292
Fnu4HI GCNGC 1 cut(s) 118
FokI GGATG 1 cut(s) 389
Fsp4HI GCNGC 1 cut(s) 118
FspBI CTAG 5 cut(s) 108, 123, 181, 223, 399
GluI GCNGC 1 cut(s) 118
GsaI CCCAGC 1 cut(s) 117
HaeIII GGCC 3 cut(s) 30, 353, 450
Hin1II CATG 4 cut(s) 38, 42, 84, 296
HincII GTYRAC 2 cut(s) 62, 167
HindII GTYRAC 2 cut(s) 62, 167
HphI GGTGA 1 cut(s) 298
Hpy166II GTNNAC 3 cut(s) 62, 167, 186
Hpy188I TCNGA 3 cut(s) 77, 147, 386
Hpy188III TCNNGA 1 cut(s) 44
Hpy8I GTNNAC 3 cut(s) 62, 167, 186
HpyAV CCTTC 1 cut(s) 367
HpyCH4III ACNGT 1 cut(s) 270
HpyCH4IV ACGT 1 cut(s) 58
HpyCH4V TGCA 2 cut(s) 38, 425
HpyF10VI GCNNNNNNNGC 1 cut(s) 117
HpyF3I CTNAG 2 cut(s) 14, 215
HpySE526I ACGT 1 cut(s) 58
Hsp92II CATG 4 cut(s) 38, 42, 84, 296
Kzo9I GATC 1 cut(s) 245
LmnI GCTCC 1 cut(s) 213
LpnPI CCDG 9 cut(s) 127, 156, 183, 310, 315, 322, 355, 367, 418
LweI GCATC 1 cut(s) 412
MaeI CTAG 5 cut(s) 108, 123, 181, 223, 399
MaeII ACGT 1 cut(s) 58
MaeIII GTNAC 1 cut(s) 304
MalI GATC 1 cut(s) 247
MboI GATC 1 cut(s) 245
MboII GAAGA 4 cut(s) 96, 102, 108, 300
MlsI TGGCCA 1 cut(s) 450
MluCI AATT 1 cut(s) 100
MluNI TGGCCA 1 cut(s) 450
MmeI TCCRAC 1 cut(s) 235
MnlI CCTC 9 cut(s) 20, 59, 80, 86, 145, 229, 343, 401, 404
Mox20I TGGCCA 1 cut(s) 450
Mph1103I ATGCAT 1 cut(s) 40
MscI TGGCCA 1 cut(s) 450
MseI TTAA 2 cut(s) 103, 403
Msp20I TGGCCA 1 cut(s) 450
MspA1I CMGCKG 1 cut(s) 117
MspR9I CCNGG 1 cut(s) 171
MvaI CCWGG 1 cut(s) 171
MvnI CGCG 2 cut(s) 45, 371
MwoI GCNNNNNNNGC 1 cut(s) 117
NdeII GATC 1 cut(s) 245
NlaIII CATG 4 cut(s) 38, 42, 84, 296
NmuCI GTSAC 1 cut(s) 304
NruI TCGCGA 1 cut(s) 45
NsiI ATGCAT 1 cut(s) 40
NspI RCATGY 3 cut(s) 38, 42, 296
PceI AGGCCT 2 cut(s) 30, 353
PkrI GCNGC 1 cut(s) 119
Psp6I CCWGG 1 cut(s) 169
PspFI CCCAGC 1 cut(s) 113
PspGI CCWGG 1 cut(s) 169
RruI TCGCGA 1 cut(s) 45
RsaI GTAC 4 cut(s) 12, 57, 397, 456
RsaNI GTAC 4 cut(s) 11, 56, 396, 455
SaqAI TTAA 2 cut(s) 103, 403
SatI GCNGC 1 cut(s) 118
Sau3AI GATC 1 cut(s) 245
ScaI AGTACT 1 cut(s) 397
ScrFI CCNGG 1 cut(s) 171
SfaNI GCATC 1 cut(s) 412
SpeI ACTAGT 1 cut(s) 398
Sse9I AATT 1 cut(s) 100
SseBI AGGCCT 2 cut(s) 30, 353
SsiI CCGC 2 cut(s) 117, 369
SspMI CTAG 5 cut(s) 108, 123, 181, 223, 399
StuI AGGCCT 2 cut(s) 30, 353
StyD4I CCNGG 1 cut(s) 169
StyI CCWWGG 1 cut(s) 190
TaaI ACNGT 1 cut(s) 270
TaiI ACGT 1 cut(s) 61
TaqI TCGA 1 cut(s) 244
TasI AATT 1 cut(s) 100
TatI WGTACW 1 cut(s) 395
TauI GCSGC 1 cut(s) 120
Tru1I TTAA 2 cut(s) 103, 403
Tru9I TTAA 2 cut(s) 103, 403
TseFI GTSAC 1 cut(s) 304
Tsp45I GTSAC 1 cut(s) 304
TspDTI ATGAA 3 cut(s) 97, 301, 393
XceI RCATGY 3 cut(s) 38, 42, 296
XspI CTAG 5 cut(s) 108, 123, 181, 223, 399
ZrmI AGTACT 1 cut(s) 397
Zsp2I ATGCAT 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.