Rmu_sc0004941.1_g000039

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004941.1
Physical Location & Seq
Reverse (-)
129310 .. 129675
366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004941.1_g000039.1.cds

Sequence Viewer

Length: 366 bp
atggattacgaccttccagaggaaggaatagaggccttccacttgctgtacgaaagactatcctcgtacctggtggaaaaagaggcctatgatcagatcgcgaccttggaaattgtcaacgaggagttctctgaccaagaacaagaagacgacgaagagattcagctggctccggcagcgctggatgatacctctcctaaggtcagggaccctaccgagaaggtcaatcttggaacagtagatgagcctatggaagtggctattagcacaaatttagagcctagcgaaaaacagaggctcattgacttattactggaattcaaagactgcttcgcggagaaatatgaggacatgccaggcctgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.9

Weight (kDa)

4.05

Isoelectric Point (pI)

51.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 101, 335
AciI CCGC 1 cut(s) 335
AcsI RAATTY 2 cut(s) 271, 317
AfaI GTAC 2 cut(s) 50, 68
AfeI AGCGCT 1 cut(s) 180
AfiI CCNNNNNNNGG 2 cut(s) 19, 23
AgsI TTSAA 1 cut(s) 322
AjnI CCWGG 2 cut(s) 69, 355
AluBI AGCT 1 cut(s) 166
AluI AGCT 1 cut(s) 166
Aor51HI AGCGCT 1 cut(s) 180
AoxI GGCC 3 cut(s) 33, 84, 358
ApeKI GCWGC 1 cut(s) 176
ApoI RAATTY 2 cut(s) 271, 317
Asp700I GAANNNNTTC 1 cut(s) 159
AspLEI GCGC 1 cut(s) 181
AspS9I GGNCC 1 cut(s) 208
AvaII GGWCC 1 cut(s) 208
AxyI CCTNAGG 1 cut(s) 198
BbsI GAAGAC 1 cut(s) 153
BbvI GCAGC 1 cut(s) 188
BciT130I CCWGG 2 cut(s) 71, 357
BclI TGATCA 1 cut(s) 91
BfaI CTAG 1 cut(s) 282
BfoI RGCGCY 1 cut(s) 182
BisI GCNGC 1 cut(s) 177
BlsI GCNGC 1 cut(s) 178
Bme1390I CCNGG 2 cut(s) 71, 357
Bme18I GGWCC 1 cut(s) 208
BmgT120I GGNCC 1 cut(s) 208
BmiI GGNNCC 3 cut(s) 171, 209, 210
BmrFI CCNGG 2 cut(s) 71, 357
BpiI GAAGAC 1 cut(s) 153
BplI GAGNNNNNCTC 2 cut(s) 113, 145
BsaJI CCNNGG 1 cut(s) 105
Bsc4I CCNNNNNNNGG 2 cut(s) 19, 23
Bse1I ACTGG 1 cut(s) 318
Bse21I CCTNAGG 1 cut(s) 198
BseBI CCWGG 2 cut(s) 71, 357
BseDI CCNNGG 1 cut(s) 105
BseGI GGATG 1 cut(s) 190
BseLI CCNNNNNNNGG 2 cut(s) 19, 23
BseNI ACTGG 1 cut(s) 318
BseRI GAGGAG 1 cut(s) 137
BseXI GCAGC 1 cut(s) 188
Bsh1236I CGCG 2 cut(s) 101, 335
BshFI GGCC 3 cut(s) 35, 86, 360
BsiSI CCGG 1 cut(s) 173
BslFI GGGAC 1 cut(s) 221
BslI CCNNNNNNNGG 2 cut(s) 19, 23
BsmFI GGGAC 1 cut(s) 221
BsnI GGCC 3 cut(s) 35, 86, 360
Bsp143I GATC 2 cut(s) 91, 96
Bsp68I TCGCGA 1 cut(s) 101
BspACI CCGC 1 cut(s) 335
BspANI GGCC 3 cut(s) 35, 86, 360
BspFNI CGCG 2 cut(s) 101, 335
BspLI GGNNCC 3 cut(s) 171, 209, 210
BsrI ACTGG 1 cut(s) 318
BssECI CCNNGG 1 cut(s) 105
BssMI GATC 2 cut(s) 91, 96
BssT1I CCWWGG 1 cut(s) 105
Bst2UI CCWGG 2 cut(s) 71, 357
Bst4CI ACNGT 1 cut(s) 238
Bst6I CTCTTC 1 cut(s) 150
BstC8I GCNNGC 1 cut(s) 168
BstDEI CTNAG 1 cut(s) 198
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 1 cut(s) 190
BstFNI CGCG 2 cut(s) 101, 335
BstH2I RGCGCY 1 cut(s) 182
BstHHI GCGC 1 cut(s) 181
BstKTI GATC 2 cut(s) 94, 99
BstMBI GATC 2 cut(s) 91, 96
BstMWI GCNNNNNNNGC 1 cut(s) 176
BstNI CCWGG 2 cut(s) 71, 357
BstNSI RCATGY 1 cut(s) 355
BstSCI CCNGG 2 cut(s) 69, 355
BstUI CGCG 2 cut(s) 101, 335
BstV1I GCAGC 1 cut(s) 188
BstV2I GAAGAC 1 cut(s) 153
Bsu36I CCTNAGG 1 cut(s) 198
BsuRI GGCC 3 cut(s) 35, 86, 360
BtsCI GGATG 1 cut(s) 190
BtuMI TCGCGA 1 cut(s) 101
Cac8I GCNNGC 1 cut(s) 168
CfoI GCGC 1 cut(s) 181
Cfr13I GGNCC 1 cut(s) 208
CsiI ACCWGGT 1 cut(s) 69
Csp6I GTAC 2 cut(s) 49, 67
CviAII CATG 1 cut(s) 352
CviJI RGCY 9 cut(s) 35, 86, 166, 170, 247, 260, 280, 298, 360
CviKI_1 RGCY 9 cut(s) 35, 86, 166, 170, 247, 260, 280, 298, 360
CviQI GTAC 2 cut(s) 49, 67
DdeI CTNAG 1 cut(s) 198
DpnI GATC 2 cut(s) 93, 98
DpnII GATC 2 cut(s) 91, 96
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
Eco130I CCWWGG 1 cut(s) 105
Eco147I AGGCCT 3 cut(s) 35, 86, 360
Eco47I GGWCC 1 cut(s) 208
Eco47III AGCGCT 1 cut(s) 180
Eco81I CCTNAGG 1 cut(s) 198
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoO109I RGGNCCY 1 cut(s) 208
EcoRI GAATTC 1 cut(s) 317
EcoRII CCWGG 2 cut(s) 69, 355
EcoT14I CCWWGG 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 105
FaeI CATG 1 cut(s) 355
FaiI YATR 4 cut(s) 90, 251, 345, 353
FaqI GGGAC 1 cut(s) 221
FatI CATG 1 cut(s) 351
FbaI TGATCA 1 cut(s) 91
Fnu4HI GCNGC 1 cut(s) 177
FokI GGATG 1 cut(s) 197
Fsp4HI GCNGC 1 cut(s) 177
FspBI CTAG 1 cut(s) 282
GlaI GCGC 1 cut(s) 180
GluI GCNGC 1 cut(s) 177
HaeII RGCGCY 1 cut(s) 182
HaeIII GGCC 3 cut(s) 35, 86, 360
HapII CCGG 1 cut(s) 173
HhaI GCGC 1 cut(s) 181
Hin1II CATG 1 cut(s) 355
Hin6I GCGC 1 cut(s) 179
HinP1I GCGC 1 cut(s) 179
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HinfI GANTC 1 cut(s) 160
HpaII CCGG 1 cut(s) 173
Hpy166II GTNNAC 1 cut(s) 118
Hpy188I TCNGA 2 cut(s) 96, 133
Hpy188III TCNNGA 2 cut(s) 17, 100
Hpy8I GTNNAC 1 cut(s) 118
Hpy99I CGWCG 1 cut(s) 155
HpyAV CCTTC 4 cut(s) 17, 23, 46, 214
HpyCH4III ACNGT 1 cut(s) 238
HpyF10VI GCNNNNNNNGC 1 cut(s) 176
HpyF3I CTNAG 1 cut(s) 198
Hsp92II CATG 1 cut(s) 355
HspAI GCGC 1 cut(s) 179
KflI GGGWCCC 1 cut(s) 208
Ksp22I TGATCA 1 cut(s) 91
Kzo9I GATC 2 cut(s) 91, 96
LmnI GCTCC 1 cut(s) 175
LpnPI CCDG 9 cut(s) 30, 56, 83, 152, 167, 186, 190, 299, 342
Lsp1109I GCAGC 1 cut(s) 188
MabI ACCWGGT 1 cut(s) 69
MaeI CTAG 1 cut(s) 282
MalI GATC 2 cut(s) 93, 98
MboI GATC 2 cut(s) 91, 96
MboII GAAGA 2 cut(s) 158, 167
MluCI AATT 3 cut(s) 111, 271, 317
MnlI CCTC 8 cut(s) 13, 25, 73, 76, 115, 202, 288, 340
MroXI GAANNNNTTC 1 cut(s) 159
MspA1I CMGCKG 1 cut(s) 166
MspI CCGG 1 cut(s) 173
MspR9I CCNGG 2 cut(s) 71, 357
MvaI CCWGG 2 cut(s) 71, 357
MvnI CGCG 2 cut(s) 101, 335
MwoI GCNNNNNNNGC 1 cut(s) 176
NdeII GATC 2 cut(s) 91, 96
NlaIII CATG 1 cut(s) 355
NlaIV GGNNCC 3 cut(s) 171, 209, 210
NruI TCGCGA 1 cut(s) 101
NspI RCATGY 1 cut(s) 355
PceI AGGCCT 3 cut(s) 35, 86, 360
PdmI GAANNNNTTC 1 cut(s) 159
PfeI GAWTC 1 cut(s) 160
PkrI GCNGC 1 cut(s) 178
PpuMI RGGWCCY 1 cut(s) 208
Psp5II RGGWCCY 1 cut(s) 208
Psp6I CCWGG 2 cut(s) 69, 355
PspGI CCWGG 2 cut(s) 69, 355
PspN4I GGNNCC 3 cut(s) 171, 209, 210
PspPI GGNCC 1 cut(s) 208
PspPPI RGGWCCY 1 cut(s) 208
PvuII CAGCTG 1 cut(s) 166
RruI TCGCGA 1 cut(s) 101
RsaI GTAC 2 cut(s) 50, 68
RsaNI GTAC 2 cut(s) 49, 67
SatI GCNGC 1 cut(s) 177
Sau3AI GATC 2 cut(s) 91, 96
Sau96I GGNCC 1 cut(s) 208
ScrFI CCNGG 2 cut(s) 71, 357
SetI ASST 7 cut(s) 15, 72, 107, 168, 194, 204, 225
SexAI ACCWGGT 1 cut(s) 69
SinI GGWCC 1 cut(s) 208
Sse9I AATT 3 cut(s) 111, 271, 317
SseBI AGGCCT 3 cut(s) 35, 86, 360
SsiI CCGC 1 cut(s) 335
SspMI CTAG 1 cut(s) 282
StuI AGGCCT 3 cut(s) 35, 86, 360
StyD4I CCNGG 2 cut(s) 69, 355
StyI CCWWGG 1 cut(s) 105
TaaI ACNGT 1 cut(s) 238
TasI AATT 3 cut(s) 111, 271, 317
TfiI GAWTC 1 cut(s) 160
TseI GCWGC 1 cut(s) 176
VpaK11BI GGWCC 1 cut(s) 208
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 2 cut(s) 271, 317
XceI RCATGY 1 cut(s) 355
XmnI GAANNNNTTC 1 cut(s) 159
XspI CTAG 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.