Rmu_sc0031008.1_g000002

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0031008.1
Physical Location & Seq
Reverse (-)
2339 .. 2832
494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0031008.1_g000002.1.cds

Sequence Viewer

Length: 494 bp
gaatagaggccttccattctttgtacgacaggttgtcttcgtacttggtggagaaagaggcctatgatcgagtcgcgacatcggagtgcgtcaacgaagagttctctgaccatgaggaggacgaggaggaaattcaactcagcccagcggcgttggatgacactcctccaaaagtcagggatcctatcgagaaggtcaatttggggaagacaaatgagcccatggaagtggctattagtacatacttagagcctaacgagaaacataggctgattgacttgttgctggagtacaaggattgtttcacggaaaaatacgaagacatgccaagcctatcacccgacttggtttcccacaagctaccaatgttgcttaataagaggcccgtgaagcaagagccatggagaatgaacttggagacccaagtcttggttaaagaggaagttgagaagatgcacaagtcaggaatcatcagggtggccaaatataactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

163

Amino Acids

19.03

Weight (kDa)

4.79

Isoelectric Point (pI)

62.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 429
AccII CGCG 1 cut(s) 76
AciI CCGC 1 cut(s) 148
AclWI GGATC 2 cut(s) 175, 188
AcoI YGGCCR 1 cut(s) 479
AcsI RAATTY 1 cut(s) 131
AfaI GTAC 4 cut(s) 25, 43, 240, 292
AfiI CCNNNNNNNGG 2 cut(s) 117, 429
AgsI TTSAA 1 cut(s) 136
AhdI GACNNNNNGTC 1 cut(s) 33
AjuI GAANNNNNNNTTGG 2 cut(s) 184, 216
AluBI AGCT 1 cut(s) 360
AluI AGCT 1 cut(s) 360
Alw26I GTCTC 1 cut(s) 412
AlwI GGATC 2 cut(s) 175, 188
AoxI GGCC 4 cut(s) 8, 59, 382, 479
ApoI RAATTY 1 cut(s) 131
AspS9I GGNCC 1 cut(s) 383
AsuHPI GGTGA 1 cut(s) 329
BalI TGGCCA 1 cut(s) 481
BamHI GGATCC 1 cut(s) 180
BanII GRGCYC 1 cut(s) 221
BbsI GAAGAC 3 cut(s) 29, 214, 326
BcoDI GTCTC 1 cut(s) 412
BfaI CTAG 1 cut(s) 492
BisI GCNGC 1 cut(s) 149
BlsI GCNGC 1 cut(s) 150
BmeRI GACNNNNNGTC 1 cut(s) 33
BmgT120I GGNCC 1 cut(s) 383
BmiI GGNNCC 1 cut(s) 182
BmsI GCATC 1 cut(s) 443
BoxI GACNNNNGTC 1 cut(s) 424
BpiI GAAGAC 3 cut(s) 29, 214, 326
BpmI CTGGAG 1 cut(s) 307
BsaI GGTCTC 1 cut(s) 412
BsaJI CCNNGG 2 cut(s) 221, 400
Bsc4I CCNNNNNNNGG 2 cut(s) 117, 429
BseDI CCNNGG 2 cut(s) 221, 400
BseGI GGATG 1 cut(s) 162
BseLI CCNNNNNNNGG 2 cut(s) 117, 429
BseMII CTCAG 1 cut(s) 153
BseRI GAGGAG 3 cut(s) 130, 139, 155
BseYI CCCAGC 1 cut(s) 144
Bsh1236I CGCG 1 cut(s) 76
BshFI GGCC 4 cut(s) 10, 61, 384, 481
BslI CCNNNNNNNGG 2 cut(s) 117, 429
BsmAI GTCTC 1 cut(s) 412
BsnI GGCC 4 cut(s) 10, 61, 384, 481
Bso31I GGTCTC 1 cut(s) 412
Bsp1286I GDGCHC 1 cut(s) 221
Bsp143I GATC 2 cut(s) 66, 180
Bsp19I CCATGG 2 cut(s) 221, 400
Bsp68I TCGCGA 1 cut(s) 76
BspACI CCGC 1 cut(s) 148
BspANI GGCC 4 cut(s) 10, 61, 384, 481
BspCNI CTCAG 1 cut(s) 152
BspFNI CGCG 1 cut(s) 76
BspLI GGNNCC 1 cut(s) 182
BspPI GGATC 2 cut(s) 175, 188
BspTNI GGTCTC 1 cut(s) 412
BssECI CCNNGG 2 cut(s) 221, 400
BssMI GATC 2 cut(s) 66, 180
BssT1I CCWWGG 2 cut(s) 221, 400
Bst6I CTCTTC 1 cut(s) 92
BstDEI CTNAG 2 cut(s) 139, 246
BstDSI CCRYGG 2 cut(s) 221, 400
BstF5I GGATG 1 cut(s) 162
BstFNI CGCG 1 cut(s) 76
BstKTI GATC 2 cut(s) 69, 183
BstMAI GTCTC 1 cut(s) 412
BstMBI GATC 2 cut(s) 66, 180
BstMWI GCNNNNNNNGC 1 cut(s) 390
BstNSI RCATGY 1 cut(s) 327
BstPAI GACNNNNGTC 1 cut(s) 424
BstUI CGCG 1 cut(s) 76
BstV2I GAAGAC 3 cut(s) 29, 214, 326
BstX2I RGATCY 1 cut(s) 180
BstXI CCANNNNNNTGG 1 cut(s) 228
BstYI RGATCY 1 cut(s) 180
BsuRI GGCC 4 cut(s) 10, 61, 384, 481
BtgI CCRYGG 2 cut(s) 221, 400
BtsCI GGATG 1 cut(s) 162
BtuMI TCGCGA 1 cut(s) 76
Cfr13I GGNCC 1 cut(s) 383
CseI GACGC 1 cut(s) 78
Csp6I GTAC 4 cut(s) 24, 42, 239, 291
CviAII CATG 4 cut(s) 112, 222, 324, 401
CviQI GTAC 4 cut(s) 24, 42, 239, 291
DdeI CTNAG 2 cut(s) 139, 246
DpnI GATC 2 cut(s) 68, 182
DpnII GATC 2 cut(s) 66, 180
DriI GACNNNNNGTC 1 cut(s) 33
EaeI YGGCCR 1 cut(s) 479
Eam1104I CTCTTC 1 cut(s) 92
Eam1105I GACNNNNNGTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 92
Eco130I CCWWGG 2 cut(s) 221, 400
Eco147I AGGCCT 2 cut(s) 10, 61
Eco24I GRGCYC 1 cut(s) 221
Eco31I GGTCTC 1 cut(s) 412
EcoT14I CCWWGG 2 cut(s) 221, 400
EcoT38I GRGCYC 1 cut(s) 221
ErhI CCWWGG 2 cut(s) 221, 400
FaeI CATG 4 cut(s) 115, 225, 327, 404
FaiI YATR 8 cut(s) 65, 113, 223, 243, 266, 325, 402, 488
FatI CATG 4 cut(s) 111, 221, 323, 400
Fnu4HI GCNGC 1 cut(s) 149
FokI GGATG 1 cut(s) 169
FriOI GRGCYC 1 cut(s) 221
Fsp4HI GCNGC 1 cut(s) 149
FspBI CTAG 1 cut(s) 492
GluI GCNGC 1 cut(s) 149
GsaI CCCAGC 1 cut(s) 148
GsuI CTGGAG 1 cut(s) 307
HaeIII GGCC 4 cut(s) 10, 61, 384, 481
HgaI GACGC 1 cut(s) 78
Hin1II CATG 4 cut(s) 115, 225, 327, 404
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HinfI GANTC 2 cut(s) 71, 467
HphI GGTGA 1 cut(s) 329
Hpy166II GTNNAC 1 cut(s) 93
Hpy188I TCNGA 2 cut(s) 84, 108
Hpy188III TCNNGA 3 cut(s) 75, 189, 464
Hpy8I GTNNAC 1 cut(s) 93
HpyAV CCTTC 2 cut(s) 21, 186
HpyCH4V TGCA 1 cut(s) 456
HpyF10VI GCNNNNNNNGC 1 cut(s) 390
HpyF3I CTNAG 2 cut(s) 139, 246
Hsp92II CATG 4 cut(s) 115, 225, 327, 404
Kzo9I GATC 2 cut(s) 66, 180
LpnPI CCDG 6 cut(s) 15, 158, 162, 271, 449, 459
LweI GCATC 1 cut(s) 443
MaeI CTAG 1 cut(s) 492
MalI GATC 2 cut(s) 68, 182
MboI GATC 2 cut(s) 66, 180
MboII GAAGA 5 cut(s) 29, 109, 219, 331, 462
MflI RGATCY 1 cut(s) 180
MhlI GDGCHC 1 cut(s) 221
MlsI TGGCCA 1 cut(s) 481
MluCI AATT 2 cut(s) 131, 198
MluNI TGGCCA 1 cut(s) 481
MlyI GAGTC 1 cut(s) 80
MmeI TCCRAC 1 cut(s) 134
MnlI CCTC 8 cut(s) 51, 108, 111, 117, 120, 176, 374, 432
Mox20I TGGCCA 1 cut(s) 481
MscI TGGCCA 1 cut(s) 481
MseI TTAA 2 cut(s) 374, 434
MslI CAYNNNNRTG 3 cut(s) 84, 226, 475
Msp20I TGGCCA 1 cut(s) 481
MspA1I CMGCKG 1 cut(s) 148
MvnI CGCG 1 cut(s) 76
MwoI GCNNNNNNNGC 1 cut(s) 390
NcoI CCATGG 2 cut(s) 221, 400
NdeII GATC 2 cut(s) 66, 180
NlaIII CATG 4 cut(s) 115, 225, 327, 404
NlaIV GGNNCC 1 cut(s) 182
NruI TCGCGA 1 cut(s) 76
NspI RCATGY 1 cut(s) 327
PceI AGGCCT 2 cut(s) 10, 61
PfeI GAWTC 1 cut(s) 467
PflMI CCANNNNNTGG 1 cut(s) 429
PkrI GCNGC 1 cut(s) 150
PleI GAGTC 1 cut(s) 79
PpsI GAGTC 1 cut(s) 79
PshAI GACNNNNGTC 1 cut(s) 424
PspFI CCCAGC 1 cut(s) 144
PspN4I GGNNCC 1 cut(s) 182
PspPI GGNCC 1 cut(s) 383
PsuI RGATCY 1 cut(s) 180
RruI TCGCGA 1 cut(s) 76
RsaI GTAC 4 cut(s) 25, 43, 240, 292
RsaNI GTAC 4 cut(s) 24, 42, 239, 291
RseI CAYNNNNRTG 3 cut(s) 84, 226, 475
SaqAI TTAA 2 cut(s) 374, 434
SatI GCNGC 1 cut(s) 149
Sau3AI GATC 2 cut(s) 66, 180
Sau96I GGNCC 1 cut(s) 383
SchI GAGTC 1 cut(s) 80
SduI GDGCHC 1 cut(s) 221
SetI ASST 3 cut(s) 34, 197, 362
SfaNI GCATC 1 cut(s) 443
SmiMI CAYNNNNRTG 3 cut(s) 84, 226, 475
Sse9I AATT 2 cut(s) 131, 198
SseBI AGGCCT 2 cut(s) 10, 61
SsiI CCGC 1 cut(s) 148
SspMI CTAG 1 cut(s) 492
StuI AGGCCT 2 cut(s) 10, 61
StyI CCWWGG 2 cut(s) 221, 400
TaqI TCGA 2 cut(s) 69, 188
TasI AATT 2 cut(s) 131, 198
TatI WGTACW 2 cut(s) 238, 290
TauI GCSGC 1 cut(s) 151
TfiI GAWTC 1 cut(s) 467
Tru1I TTAA 2 cut(s) 374, 434
Tru9I TTAA 2 cut(s) 374, 434
TspDTI ATGAA 1 cut(s) 424
TspGWI ACGGA 1 cut(s) 322
Van91I CCANNNNNTGG 1 cut(s) 429
XapI RAATTY 1 cut(s) 131
XceI RCATGY 1 cut(s) 327
XspI CTAG 1 cut(s) 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.