Rmu_sc0031646.1_g000001

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0031646.1
Physical Location & Seq
Forward (+)
1 .. 357
357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0031646.1_g000001.1.cds

Sequence Viewer

Length: 357 bp
tcctacttggtggaaacagaggcctacgatagagtcgcgaccttagaaattgttaatgaggaattctcttaccatgaaaggcaagaagaagaaatccaactcgccgcagcggcattggatgacacacctctaggggttagggaccctaccgaaaaggtaaatctgggaacaactgatgagcccatggaagtggttatcaacacctatttagagcctagcgagaaacagaggctcatcgacttattgttggaatacaaggactgcttcgcagaaaaatacgaagatatgcccggcctatcaccagacttggtatgccaccaactaccaactctgcctgataagaggcctgtgaagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

118

Amino Acids

13.53

Weight (kDa)

4.28

Isoelectric Point (pI)

52.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 38
AciI CCGC 2 cut(s) 105, 110
AcsI RAATTY 1 cut(s) 62
AoxI GGCC 3 cut(s) 21, 292, 344
ApeKI GCWGC 1 cut(s) 107
ApoI RAATTY 1 cut(s) 62
AspS9I GGNCC 1 cut(s) 142
AsuC2I CCSGG 1 cut(s) 291
AsuHPI GGTGA 1 cut(s) 291
AvaII GGWCC 1 cut(s) 142
BanII GRGCYC 1 cut(s) 183
BbvI GCAGC 1 cut(s) 119
BcnI CCSGG 1 cut(s) 291
BfaI CTAG 2 cut(s) 131, 216
BglI GCCNNNNNGGC 1 cut(s) 110
BisI GCNGC 3 cut(s) 105, 108, 111
BlsI GCNGC 3 cut(s) 106, 109, 112
Bme1390I CCNGG 1 cut(s) 291
Bme18I GGWCC 1 cut(s) 142
BmgT120I GGNCC 1 cut(s) 142
BmiI GGNNCC 2 cut(s) 143, 144
BmrFI CCNGG 1 cut(s) 291
BplI GAGNNNNNCTC 2 cut(s) 50, 82
BpuMI CCSGG 1 cut(s) 291
BsaJI CCNNGG 1 cut(s) 183
BseDI CCNNGG 1 cut(s) 183
BseGI GGATG 1 cut(s) 124
BseXI GCAGC 1 cut(s) 119
Bsh1236I CGCG 1 cut(s) 38
BshFI GGCC 3 cut(s) 23, 294, 346
BsiSI CCGG 1 cut(s) 291
BslFI GGGAC 1 cut(s) 155
BsmFI GGGAC 1 cut(s) 155
BsnI GGCC 3 cut(s) 23, 294, 346
Bsp1286I GDGCHC 1 cut(s) 183
Bsp19I CCATGG 1 cut(s) 183
Bsp68I TCGCGA 1 cut(s) 38
BspACI CCGC 2 cut(s) 105, 110
BspANI GGCC 3 cut(s) 23, 294, 346
BspFNI CGCG 1 cut(s) 38
BspLI GGNNCC 2 cut(s) 143, 144
BssECI CCNNGG 1 cut(s) 183
BssT1I CCWWGG 1 cut(s) 183
BstDEI CTNAG 1 cut(s) 43
BstDSI CCRYGG 1 cut(s) 183
BstF5I GGATG 1 cut(s) 124
BstFNI CGCG 1 cut(s) 38
BstMWI GCNNNNNNNGC 1 cut(s) 110
BstSCI CCNGG 1 cut(s) 289
BstUI CGCG 1 cut(s) 38
BstV1I GCAGC 1 cut(s) 119
BstXI CCANNNNNNTGG 1 cut(s) 190
BsuRI GGCC 3 cut(s) 23, 294, 346
BtgI CCRYGG 1 cut(s) 183
BtsCI GGATG 1 cut(s) 124
BtuMI TCGCGA 1 cut(s) 38
Cfr13I GGNCC 1 cut(s) 142
CviAII CATG 2 cut(s) 74, 184
CviJI RGCY 6 cut(s) 23, 181, 214, 232, 294, 346
CviKI_1 RGCY 6 cut(s) 23, 181, 214, 232, 294, 346
DdeI CTNAG 1 cut(s) 43
Eco130I CCWWGG 1 cut(s) 183
Eco147I AGGCCT 2 cut(s) 23, 346
Eco24I GRGCYC 1 cut(s) 183
Eco47I GGWCC 1 cut(s) 142
EcoO109I RGGNCCY 1 cut(s) 142
EcoRI GAATTC 1 cut(s) 62
EcoT14I CCWWGG 1 cut(s) 183
EcoT38I GRGCYC 1 cut(s) 183
ErhI CCWWGG 1 cut(s) 183
FaeI CATG 2 cut(s) 77, 187
FaiI YATR 4 cut(s) 75, 185, 287, 313
FalI AAGNNNNNCTT 2 cut(s) 248, 280
FaqI GGGAC 1 cut(s) 155
FatI CATG 2 cut(s) 73, 183
Fnu4HI GCNGC 3 cut(s) 105, 108, 111
FokI GGATG 1 cut(s) 131
FriOI GRGCYC 1 cut(s) 183
Fsp4HI GCNGC 3 cut(s) 105, 108, 111
FspBI CTAG 2 cut(s) 131, 216
GluI GCNGC 3 cut(s) 105, 108, 111
HaeIII GGCC 3 cut(s) 23, 294, 346
HapII CCGG 1 cut(s) 291
Hin1II CATG 2 cut(s) 77, 187
HinfI GANTC 1 cut(s) 33
HpaII CCGG 1 cut(s) 291
HphI GGTGA 1 cut(s) 291
Hpy188III TCNNGA 1 cut(s) 37
HpyF10VI GCNNNNNNNGC 1 cut(s) 110
HpyF3I CTNAG 1 cut(s) 43
Hsp92II CATG 2 cut(s) 77, 187
KflI GGGWCCC 1 cut(s) 142
LpnPI CCDG 4 cut(s) 149, 304, 315, 348
Lsp1109I GCAGC 1 cut(s) 119
MaeI CTAG 2 cut(s) 131, 216
MboII GAAGA 3 cut(s) 98, 101, 293
MhlI GDGCHC 1 cut(s) 183
MluCI AATT 2 cut(s) 48, 62
MlyI GAGTC 1 cut(s) 42
MmeI TCCRAC 2 cut(s) 121, 228
MnlI CCTC 5 cut(s) 13, 52, 138, 222, 336
MseI TTAA 1 cut(s) 54
MslI CAYNNNNRTG 1 cut(s) 188
MspA1I CMGCKG 1 cut(s) 110
MspI CCGG 1 cut(s) 291
MspR9I CCNGG 1 cut(s) 291
MvnI CGCG 1 cut(s) 38
MwoI GCNNNNNNNGC 1 cut(s) 110
NciI CCSGG 1 cut(s) 291
NcoI CCATGG 1 cut(s) 183
NlaIII CATG 2 cut(s) 77, 187
NlaIV GGNNCC 2 cut(s) 143, 144
NruI TCGCGA 1 cut(s) 38
PceI AGGCCT 2 cut(s) 23, 346
PkrI GCNGC 3 cut(s) 106, 109, 112
PleI GAGTC 1 cut(s) 41
PpsI GAGTC 1 cut(s) 41
PpuMI RGGWCCY 1 cut(s) 142
Psp5II RGGWCCY 1 cut(s) 142
PspN4I GGNNCC 2 cut(s) 143, 144
PspPI GGNCC 1 cut(s) 142
PspPPI RGGWCCY 1 cut(s) 142
RruI TCGCGA 1 cut(s) 38
RseI CAYNNNNRTG 1 cut(s) 188
SaqAI TTAA 1 cut(s) 54
SatI GCNGC 3 cut(s) 105, 108, 111
Sau96I GGNCC 1 cut(s) 142
SchI GAGTC 1 cut(s) 42
ScrFI CCNGG 1 cut(s) 291
SduI GDGCHC 1 cut(s) 183
SetI ASST 4 cut(s) 44, 130, 159, 206
SinI GGWCC 1 cut(s) 142
SmiMI CAYNNNNRTG 1 cut(s) 188
Sse9I AATT 2 cut(s) 48, 62
SseBI AGGCCT 2 cut(s) 23, 346
SsiI CCGC 2 cut(s) 105, 110
SspMI CTAG 2 cut(s) 131, 216
StuI AGGCCT 2 cut(s) 23, 346
StyD4I CCNGG 1 cut(s) 289
StyI CCWWGG 1 cut(s) 183
TaqI TCGA 1 cut(s) 237
TasI AATT 2 cut(s) 48, 62
TauI GCSGC 2 cut(s) 107, 113
Tru1I TTAA 1 cut(s) 54
Tru9I TTAA 1 cut(s) 54
TseI GCWGC 1 cut(s) 107
TspDTI ATGAA 1 cut(s) 90
VpaK11BI GGWCC 1 cut(s) 142
XapI RAATTY 1 cut(s) 62
XspI CTAG 2 cut(s) 131, 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.