Rmu_sc0036436.1_g000001

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0036436.1
Physical Location & Seq
Reverse (-)
76 .. 720
645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0036436.1_g000001.1.cds

Sequence Viewer

Length: 564 bp
atgtttctggaaacagaggatgccaatagcaaggagttcttcatgagctttacatggccaaccctagctatggtccaacaaatgaggcctctgtacatcacggcggagattgttggtactaaggttagcaaaatcatggttgatattagagccgcggtcaatgtcaacataacaagaaccatgcatttacttgggattaagaaagagaagatccaatctacgtctctcatgctcaagaacttcgcggggattgtaacgaaaacattgggcttattgttcctgcgtatcaagatccactggagttactgtgtttcgtcaactctcagggtaacagataaagctgaggtgattaaagtggatcctcgtccattcccagtttccgcgaattatgtagatgccaggtactacttggagcctattactccattgcaggttagtggcatcgatgacaaaggccgccccacgggggtgacggcctctaagctggcacaatgggggctcacgctcgcaaaggaaggcctggaaaggcctggccacgccgtgcccaaacccttaaacgattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

187

Amino Acids

20.94

Weight (kDa)

9.55

Isoelectric Point (pI)

21.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 421
AccII CGCG 3 cut(s) 155, 245, 383
AciI CCGC 6 cut(s) 104, 153, 155, 245, 381, 457
AclWI GGATC 4 cut(s) 205, 286, 353, 366
AcoI YGGCCR 2 cut(s) 56, 532
AdeI CACNNNGTG 1 cut(s) 541
AfaI GTAC 3 cut(s) 95, 118, 404
AfiI CCNNNNNNNGG 3 cut(s) 70, 463, 466
AjnI CCWGG 3 cut(s) 398, 519, 529
AleI CACNNNNGTG 1 cut(s) 467
AluBI AGCT 4 cut(s) 48, 68, 341, 484
AluI AGCT 4 cut(s) 48, 68, 341, 484
Alw26I GTCTC 1 cut(s) 228
AlwI GGATC 4 cut(s) 205, 286, 353, 366
AoxI GGCC 7 cut(s) 56, 86, 454, 474, 517, 527, 532
AspS9I GGNCC 1 cut(s) 73
AsuHPI GGTGA 2 cut(s) 358, 481
AvaII GGWCC 1 cut(s) 73
BaeGI GKGCMC 1 cut(s) 546
BaeI ACNNNNGTAYC 2 cut(s) 108, 141
BalI TGGCCA 2 cut(s) 58, 534
BamHI GGATCC 1 cut(s) 358
BanII GRGCYC 1 cut(s) 501
BbvCI CCTCAGC 1 cut(s) 342
BceAI ACGGC 3 cut(s) 117, 489, 524
BciT130I CCWGG 3 cut(s) 400, 521, 531
BcoDI GTCTC 1 cut(s) 228
BfaI CTAG 1 cut(s) 65
BfuAI ACCTGC 1 cut(s) 421
BisI GCNGC 2 cut(s) 153, 457
BlsI GCNGC 2 cut(s) 154, 458
Bme1390I CCNGG 3 cut(s) 400, 521, 531
Bme18I GGWCC 1 cut(s) 73
BmgT120I GGNCC 1 cut(s) 73
BmiI GGNNCC 2 cut(s) 360, 414
BmrFI CCNGG 3 cut(s) 400, 521, 531
BmrI ACTGGG 1 cut(s) 368
BmsI GCATC 3 cut(s) 10, 385, 450
BmuI ACTGGG 1 cut(s) 368
BpmI CTGGAG 1 cut(s) 319
Bpu10I CCTNAGC 1 cut(s) 342
BpuEI CTTGAG 1 cut(s) 218
Bsa29I ATCGAT 1 cut(s) 444
BsaJI CCNNGG 2 cut(s) 153, 462
BsaXI ACNNNNNCTCC 2 cut(s) 292, 322
Bsc4I CCNNNNNNNGG 3 cut(s) 70, 463, 466
Bse1I ACTGG 2 cut(s) 302, 374
Bse3DI GCAATG 1 cut(s) 425
BseBI CCWGG 3 cut(s) 400, 521, 531
BseCI ATCGAT 1 cut(s) 444
BseDI CCNNGG 2 cut(s) 153, 462
BseGI GGATG 1 cut(s) 25
BseLI CCNNNNNNNGG 3 cut(s) 70, 463, 466
BseMI GCAATG 1 cut(s) 425
BseMII CTCAG 2 cut(s) 333, 337
BseNI ACTGG 2 cut(s) 302, 374
BseSI GKGCMC 1 cut(s) 546
Bsh1236I CGCG 3 cut(s) 155, 245, 383
BshFI GGCC 7 cut(s) 58, 88, 456, 476, 519, 529, 534
BshVI ATCGAT 1 cut(s) 444
BslI CCNNNNNNNGG 3 cut(s) 70, 463, 466
BsmAI GTCTC 1 cut(s) 228
BsmBI CGTCTC 1 cut(s) 228
BsnI GGCC 7 cut(s) 58, 88, 456, 476, 519, 529, 534
Bsp1286I GDGCHC 2 cut(s) 501, 546
Bsp1407I TGTACA 1 cut(s) 93
Bsp143I GATC 3 cut(s) 210, 291, 358
BspACI CCGC 6 cut(s) 104, 153, 155, 245, 381, 457
BspANI GGCC 7 cut(s) 58, 88, 456, 476, 519, 529, 534
BspCNI CTCAG 2 cut(s) 334, 336
BspDI ATCGAT 1 cut(s) 444
BspFNI CGCG 3 cut(s) 155, 245, 383
BspHI TCATGA 1 cut(s) 42
BspLI GGNNCC 2 cut(s) 360, 414
BspMI ACCTGC 1 cut(s) 421
BspPI GGATC 4 cut(s) 205, 286, 353, 366
BsrDI GCAATG 1 cut(s) 425
BsrGI TGTACA 1 cut(s) 93
BsrI ACTGG 2 cut(s) 302, 374
BssECI CCNNGG 2 cut(s) 153, 462
BssMI GATC 3 cut(s) 210, 291, 358
Bst2UI CCWGG 3 cut(s) 400, 521, 531
Bst4CI ACNGT 1 cut(s) 308
BstAUI TGTACA 1 cut(s) 93
BstC8I GCNNGC 2 cut(s) 486, 507
BstDEI CTNAG 4 cut(s) 120, 323, 342, 480
BstDSI CCRYGG 2 cut(s) 153, 462
BstF5I GGATG 1 cut(s) 25
BstFNI CGCG 3 cut(s) 155, 245, 383
BstKTI GATC 3 cut(s) 213, 294, 361
BstMAI GTCTC 1 cut(s) 228
BstMBI GATC 3 cut(s) 210, 291, 358
BstNI CCWGG 3 cut(s) 400, 521, 531
BstSCI CCNGG 3 cut(s) 398, 519, 529
BstSLI GKGCMC 1 cut(s) 546
BstUI CGCG 3 cut(s) 155, 245, 383
BstX2I RGATCY 3 cut(s) 210, 291, 358
BstYI RGATCY 3 cut(s) 210, 291, 358
Bsu15I ATCGAT 1 cut(s) 444
BsuRI GGCC 7 cut(s) 58, 88, 456, 476, 519, 529, 534
BsuTUI ATCGAT 1 cut(s) 444
BtgI CCRYGG 2 cut(s) 153, 462
BtsCI GGATG 1 cut(s) 25
BtsIMutI CAGTG 1 cut(s) 295
BveI ACCTGC 1 cut(s) 421
Cac8I GCNNGC 2 cut(s) 486, 507
CciI TCATGA 1 cut(s) 42
Cfr13I GGNCC 1 cut(s) 73
Cfr42I CCGCGG 1 cut(s) 156
ClaI ATCGAT 1 cut(s) 444
Csp6I GTAC 3 cut(s) 94, 117, 403
CviAII CATG 5 cut(s) 43, 54, 136, 181, 229
CviQI GTAC 3 cut(s) 94, 117, 403
DdeI CTNAG 4 cut(s) 120, 323, 342, 480
DpnI GATC 3 cut(s) 212, 293, 360
DpnII GATC 3 cut(s) 210, 291, 358
DraIII CACNNNGTG 1 cut(s) 541
EaeI YGGCCR 2 cut(s) 56, 532
EciI GGCGGA 1 cut(s) 119
Eco147I AGGCCT 3 cut(s) 88, 519, 529
Eco24I GRGCYC 1 cut(s) 501
Eco47I GGWCC 1 cut(s) 73
EcoRII CCWGG 3 cut(s) 398, 519, 529
EcoT22I ATGCAT 1 cut(s) 186
EcoT38I GRGCYC 1 cut(s) 501
Esp3I CGTCTC 1 cut(s) 228
FaeI CATG 5 cut(s) 46, 57, 139, 184, 232
FaiI YATR 8 cut(s) 44, 55, 71, 137, 170, 182, 230, 390
FalI AAGNNNNNCTT 2 cut(s) 23, 55
FatI CATG 5 cut(s) 42, 53, 135, 180, 228
FauI CCCGC 1 cut(s) 238
Fnu4HI GCNGC 2 cut(s) 153, 457
FokI GGATG 1 cut(s) 32
FriOI GRGCYC 1 cut(s) 501
Fsp4HI GCNGC 2 cut(s) 153, 457
FspBI CTAG 1 cut(s) 65
GluI GCNGC 2 cut(s) 153, 457
GsuI CTGGAG 1 cut(s) 319
HaeIII GGCC 7 cut(s) 58, 88, 456, 476, 519, 529, 534
Hin1II CATG 5 cut(s) 46, 57, 139, 184, 232
HincII GTYRAC 2 cut(s) 166, 318
HindII GTYRAC 2 cut(s) 166, 318
HphI GGTGA 2 cut(s) 358, 481
Hpy166II GTNNAC 2 cut(s) 166, 318
Hpy188III TCNNGA 4 cut(s) 8, 43, 235, 289
Hpy8I GTNNAC 2 cut(s) 166, 318
HpyAV CCTTC 1 cut(s) 509
HpyCH4III ACNGT 1 cut(s) 308
HpyCH4IV ACGT 1 cut(s) 221
HpyCH4V TGCA 2 cut(s) 184, 430
HpyF3I CTNAG 4 cut(s) 120, 323, 342, 480
HpySE526I ACGT 1 cut(s) 221
Hsp92II CATG 5 cut(s) 46, 57, 139, 184, 232
KspI CCGCGG 1 cut(s) 156
Kzo9I GATC 3 cut(s) 210, 291, 358
LmnI GCTCC 1 cut(s) 412
LweI GCATC 3 cut(s) 10, 385, 450
MaeI CTAG 1 cut(s) 65
MaeII ACGT 1 cut(s) 221
MaeIII GTNAC 4 cut(s) 253, 302, 328, 469
MalI GATC 3 cut(s) 212, 293, 360
MboI GATC 3 cut(s) 210, 291, 358
MboII GAAGA 2 cut(s) 31, 220
MflI RGATCY 3 cut(s) 210, 291, 358
MhlI GDGCHC 2 cut(s) 501, 546
MlsI TGGCCA 2 cut(s) 58, 534
MluCI AATT 1 cut(s) 385
MluNI TGGCCA 2 cut(s) 58, 534
MmeI TCCRAC 1 cut(s) 100
MnlI CCTC 6 cut(s) 10, 78, 99, 337, 372, 487
Mox20I TGGCCA 2 cut(s) 58, 534
Mph1103I ATGCAT 1 cut(s) 186
MscI TGGCCA 2 cut(s) 58, 534
MseI TTAA 4 cut(s) 198, 351, 554, 562
MslI CAYNNNNRTG 1 cut(s) 467
Msp20I TGGCCA 2 cut(s) 58, 534
MspA1I CMGCKG 1 cut(s) 155
MspR9I CCNGG 3 cut(s) 400, 521, 531
MvaI CCWGG 3 cut(s) 400, 521, 531
MvnI CGCG 3 cut(s) 155, 245, 383
NdeII GATC 3 cut(s) 210, 291, 358
NlaIII CATG 5 cut(s) 46, 57, 139, 184, 232
NlaIV GGNNCC 2 cut(s) 360, 414
NmuCI GTSAC 1 cut(s) 469
NsiI ATGCAT 1 cut(s) 186
OliI CACNNNNGTG 1 cut(s) 467
PagI TCATGA 1 cut(s) 42
PceI AGGCCT 3 cut(s) 88, 519, 529
PkrI GCNGC 2 cut(s) 154, 458
Psp6I CCWGG 3 cut(s) 398, 519, 529
PspGI CCWGG 3 cut(s) 398, 519, 529
PspN4I GGNNCC 2 cut(s) 360, 414
PspPI GGNCC 1 cut(s) 73
PsuI RGATCY 3 cut(s) 210, 291, 358
RsaI GTAC 3 cut(s) 95, 118, 404
RsaNI GTAC 3 cut(s) 94, 117, 403
RseI CAYNNNNRTG 1 cut(s) 467
SacII CCGCGG 1 cut(s) 156
SaqAI TTAA 4 cut(s) 198, 351, 554, 562
SatI GCNGC 2 cut(s) 153, 457
Sau3AI GATC 3 cut(s) 210, 291, 358
Sau96I GGNCC 1 cut(s) 73
ScrFI CCNGG 3 cut(s) 400, 521, 531
SduI GDGCHC 2 cut(s) 501, 546
SetI ASST 9 cut(s) 50, 70, 126, 224, 343, 348, 404, 435, 486
SfaNI GCATC 3 cut(s) 10, 385, 450
Sfr303I CCGCGG 1 cut(s) 156
SgrBI CCGCGG 1 cut(s) 156
SinI GGWCC 1 cut(s) 73
SmiMI CAYNNNNRTG 1 cut(s) 467
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
Sse9I AATT 1 cut(s) 385
SseBI AGGCCT 3 cut(s) 88, 519, 529
SsiI CCGC 6 cut(s) 104, 153, 155, 245, 381, 457
SspMI CTAG 1 cut(s) 65
StuI AGGCCT 3 cut(s) 88, 519, 529
StyD4I CCNGG 3 cut(s) 398, 519, 529
TaaI ACNGT 1 cut(s) 308
TaiI ACGT 1 cut(s) 224
TaqI TCGA 1 cut(s) 444
TasI AATT 1 cut(s) 385
TatI WGTACW 1 cut(s) 93
TauI GCSGC 2 cut(s) 155, 459
Tru1I TTAA 4 cut(s) 198, 351, 554, 562
Tru9I TTAA 4 cut(s) 198, 351, 554, 562
TscAI CASTG 1 cut(s) 302
TseFI GTSAC 1 cut(s) 469
Tsp45I GTSAC 1 cut(s) 469
TspDTI ATGAA 1 cut(s) 31
TspRI CASTG 1 cut(s) 302
VpaK11BI GGWCC 1 cut(s) 73
XcmI CCANNNNNNNNNTGG 1 cut(s) 406
XspI CTAG 1 cut(s) 65
Zsp2I ATGCAT 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.