Rw0G015150

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00688
Physical Location & Seq
Reverse (-)
11516 .. 12240
725 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G015150.1

Sequence Viewer

Length: 660 bp
ATGGATTACAACCTCCCAGAGGAAGGAATAGAGGCCTTCCACTCGCTGTACAAAAGACTATCATCGTATTTAGTGGAAAAAGAGGCTTATGATCGAGTCGCAACCTTAGAGGTCGTCAATGAAGAATTCTCTGATTCAGAACGAGAGGATGAAGGGGATATTCAGCTCGCCCTGCAGCGCTGGACGATACACCTCCTAAATGCTTACTTAGAACCTAACGAGAAACATAGGCTCACTGACTTGTTACTAAAGTTCAAAGACTGCTTCGCGGAGAAGTATGAAGACATGCCCGGCCTGTCACCGGACTTGGATTGCCATCAACTGCCAACACTCCCAGACAAGAGGCCTGTGAAACAAGAACAGCGAAGAATGAATTCAAAAACCCAAGTCCTCGTCAAGCAGGAAGTCGAAAAGATGCATAAATCAGGCATTATCAAGGTAGCCAAATATAACCAGTGGCTATCTAATATAGTGCATGTTCGCAAGAAGAATGGCAAGATGAGGGTCTGCGTAGATTACAGAGACCATAATCTCGCTACACCTAATGATGTCTACCCCATGTCGGTTGAGGATATGTTAGTAGACGCAATAGCAGGACATGAATTGTTGTCCTTCATGGACGGCACGGCAGGATATCACCAAATTCCAGTCGCTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

219

Amino Acids

25.46

Weight (kDa)

5.41

Isoelectric Point (pI)

50.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 552, 582
AccII CGCG 1 cut(s) 269
AciI CCGC 1 cut(s) 269
AcsI RAATTY 3 cut(s) 125, 373, 642
AfaI GTAC 1 cut(s) 50
AfeI AGCGCT 1 cut(s) 179
AfiI CCNNNNNNNGG 4 cut(s) 19, 23, 301, 562
AgsI TTSAA 2 cut(s) 256, 378
AluBI AGCT 1 cut(s) 166
AluI AGCT 1 cut(s) 166
Alw26I GTCTC 1 cut(s) 516
AlwNI CAGNNNCTG 1 cut(s) 653
Aor51HI AGCGCT 1 cut(s) 179
AoxI GGCC 3 cut(s) 33, 292, 344
ApeKI GCWGC 1 cut(s) 175
ApoI RAATTY 3 cut(s) 125, 373, 642
Asp700I GAANNNNTTC 1 cut(s) 373
AspLEI GCGC 1 cut(s) 180
AsuC2I CCSGG 1 cut(s) 291
AsuHPI GGTGA 2 cut(s) 291, 629
BbsI GAAGAC 1 cut(s) 288
BbvI GCAGC 1 cut(s) 187
BccI CCATC 1 cut(s) 324
BceAI ACGGC 2 cut(s) 637, 642
BcnI CCSGG 1 cut(s) 291
BcoDI GTCTC 1 cut(s) 516
BfmI CTRYAG 1 cut(s) 173
BfoI RGCGCY 1 cut(s) 181
BisI GCNGC 1 cut(s) 176
BlsI GCNGC 1 cut(s) 177
Bme1390I CCNGG 1 cut(s) 291
BmrFI CCNGG 1 cut(s) 291
BmsI GCATC 1 cut(s) 405
BpiI GAAGAC 1 cut(s) 288
BpuMI CCSGG 1 cut(s) 291
BsaBI GATNNNNATC 1 cut(s) 315
BsaI GGTCTC 1 cut(s) 516
BsaWI WCCGGW 1 cut(s) 301
Bsc4I CCNNNNNNNGG 4 cut(s) 19, 23, 301, 562
Bse1I ACTGG 2 cut(s) 454, 647
Bse8I GATNNNNATC 1 cut(s) 315
BseGI GGATG 1 cut(s) 154
BseJI GATNNNNATC 1 cut(s) 315
BseLI CCNNNNNNNGG 4 cut(s) 19, 23, 301, 562
BseNI ACTGG 2 cut(s) 454, 647
BseXI GCAGC 1 cut(s) 187
Bsh1236I CGCG 1 cut(s) 269
BshFI GGCC 3 cut(s) 35, 294, 346
BsiSI CCGG 2 cut(s) 291, 302
BslI CCNNNNNNNGG 4 cut(s) 19, 23, 301, 562
BsmAI GTCTC 1 cut(s) 516
BsnI GGCC 3 cut(s) 35, 294, 346
Bso31I GGTCTC 1 cut(s) 516
Bsp1407I TGTACA 1 cut(s) 48
Bsp143I GATC 1 cut(s) 91
BspACI CCGC 1 cut(s) 269
BspANI GGCC 3 cut(s) 35, 294, 346
BspFNI CGCG 1 cut(s) 269
BspMAI CTGCAG 1 cut(s) 177
BspTNI GGTCTC 1 cut(s) 516
BsrGI TGTACA 1 cut(s) 48
BsrI ACTGG 2 cut(s) 454, 647
BssMI GATC 1 cut(s) 91
BstAUI TGTACA 1 cut(s) 48
BstC8I GCNNGC 1 cut(s) 168
BstDEI CTNAG 2 cut(s) 106, 208
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 1 cut(s) 154
BstFNI CGCG 1 cut(s) 269
BstH2I RGCGCY 1 cut(s) 181
BstHHI GCGC 1 cut(s) 180
BstKTI GATC 1 cut(s) 94
BstMAI GTCTC 1 cut(s) 516
BstMBI GATC 1 cut(s) 91
BstMWI GCNNNNNNNGC 1 cut(s) 172
BstNSI RCATGY 2 cut(s) 289, 479
BstSCI CCNGG 1 cut(s) 289
BstSFI CTRYAG 1 cut(s) 173
BstUI CGCG 1 cut(s) 269
BstV1I GCAGC 1 cut(s) 187
BstV2I GAAGAC 1 cut(s) 288
BsuRI GGCC 3 cut(s) 35, 294, 346
BtsCI GGATG 1 cut(s) 154
BtsIMutI CAGTG 2 cut(s) 234, 461
Cac8I GCNNGC 1 cut(s) 168
CaiI CAGNNNCTG 1 cut(s) 653
CfoI GCGC 1 cut(s) 180
CseI GACGC 1 cut(s) 593
Csp6I GTAC 1 cut(s) 49
CviAII CATG 5 cut(s) 286, 476, 559, 599, 616
CviJI RGCY 8 cut(s) 35, 86, 166, 232, 294, 346, 443, 460
CviKI_1 RGCY 8 cut(s) 35, 86, 166, 232, 294, 346, 443, 460
CviQI GTAC 1 cut(s) 49
DdeI CTNAG 2 cut(s) 106, 208
DpnI GATC 1 cut(s) 93
DpnII GATC 1 cut(s) 91
Eco147I AGGCCT 2 cut(s) 35, 346
Eco31I GGTCTC 1 cut(s) 516
Eco32I GATATC 1 cut(s) 635
Eco47III AGCGCT 1 cut(s) 179
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoRI GAATTC 2 cut(s) 125, 373
EcoRV GATATC 1 cut(s) 635
EcoT22I ATGCAT 1 cut(s) 420
FaeI CATG 5 cut(s) 289, 479, 562, 602, 619
FatI CATG 5 cut(s) 285, 475, 558, 598, 615
FblI GTMKAC 2 cut(s) 552, 582
Fnu4HI GCNGC 1 cut(s) 176
FokI GGATG 1 cut(s) 161
Fsp4HI GCNGC 1 cut(s) 176
GlaI GCGC 1 cut(s) 179
GluI GCNGC 1 cut(s) 176
HaeII RGCGCY 1 cut(s) 181
HaeIII GGCC 3 cut(s) 35, 294, 346
HapII CCGG 2 cut(s) 291, 302
HgaI GACGC 1 cut(s) 593
HhaI GCGC 1 cut(s) 180
Hin1II CATG 5 cut(s) 289, 479, 562, 602, 619
Hin6I GCGC 1 cut(s) 178
HinP1I GCGC 1 cut(s) 178
HinfI GANTC 2 cut(s) 96, 134
HpaII CCGG 2 cut(s) 291, 302
HphI GGTGA 2 cut(s) 291, 629
Hpy166II GTNNAC 2 cut(s) 553, 583
Hpy188I TCNGA 2 cut(s) 133, 139
Hpy8I GTNNAC 2 cut(s) 553, 583
HpyAV CCTTC 4 cut(s) 17, 46, 146, 622
HpyCH4V TGCA 3 cut(s) 175, 418, 475
HpyF10VI GCNNNNNNNGC 1 cut(s) 172
HpyF3I CTNAG 2 cut(s) 106, 208
Hsp92II CATG 5 cut(s) 289, 479, 562, 602, 619
HspAI GCGC 1 cut(s) 178
Kzo9I GATC 1 cut(s) 91
Lsp1109I GCAGC 1 cut(s) 187
LweI GCATC 1 cut(s) 405
MaeIII GTNAC 2 cut(s) 243, 297
MalI GATC 1 cut(s) 93
MboI GATC 1 cut(s) 91
MboII GAAGA 4 cut(s) 134, 293, 378, 499
MluCI AATT 4 cut(s) 125, 373, 602, 642
MlyI GAGTC 1 cut(s) 105
Mph1103I ATGCAT 1 cut(s) 420
MroXI GAANNNNTTC 1 cut(s) 373
MspI CCGG 2 cut(s) 291, 302
MspR9I CCNGG 1 cut(s) 291
MvnI CGCG 1 cut(s) 269
MwoI GCNNNNNNNGC 1 cut(s) 172
NciI CCSGG 1 cut(s) 291
NdeII GATC 1 cut(s) 91
NlaIII CATG 5 cut(s) 289, 479, 562, 602, 619
NmuCI GTSAC 1 cut(s) 297
NsiI ATGCAT 1 cut(s) 420
NspI RCATGY 2 cut(s) 289, 479
PceI AGGCCT 2 cut(s) 35, 346
PdmI GAANNNNTTC 1 cut(s) 373
PfeI GAWTC 1 cut(s) 134
PkrI GCNGC 1 cut(s) 177
PleI GAGTC 1 cut(s) 104
PpsI GAGTC 1 cut(s) 104
PstI CTGCAG 1 cut(s) 177
PstNI CAGNNNCTG 1 cut(s) 653
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
SatI GCNGC 1 cut(s) 176
Sau3AI GATC 1 cut(s) 91
SchI GAGTC 1 cut(s) 105
ScrFI CCNGG 1 cut(s) 291
SetI ASST 8 cut(s) 15, 107, 114, 168, 195, 217, 441, 544
SfaNI GCATC 1 cut(s) 405
SfcI CTRYAG 1 cut(s) 173
Sse9I AATT 4 cut(s) 125, 373, 602, 642
SseBI AGGCCT 2 cut(s) 35, 346
SsiI CCGC 1 cut(s) 269
StuI AGGCCT 2 cut(s) 35, 346
StyD4I CCNGG 1 cut(s) 289
TaqI TCGA 2 cut(s) 94, 408
TasI AATT 4 cut(s) 125, 373, 602, 642
TatI WGTACW 1 cut(s) 48
TfiI GAWTC 1 cut(s) 134
TscAI CASTG 2 cut(s) 241, 461
TseFI GTSAC 1 cut(s) 297
TseI GCWGC 1 cut(s) 175
Tsp45I GTSAC 1 cut(s) 297
TspDTI ATGAA 6 cut(s) 135, 165, 294, 386, 604, 615
TspRI CASTG 2 cut(s) 241, 461
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 3 cut(s) 125, 373, 642
XceI RCATGY 2 cut(s) 289, 479
XmiI GTMKAC 2 cut(s) 552, 582
XmnI GAANNNNTTC 1 cut(s) 373
Zsp2I ATGCAT 1 cut(s) 420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.