Rmu_sc0031293.1_g000001

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0031293.1
Physical Location & Seq
Forward (+)
1 .. 771
771 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0031293.1_g000001.1.cds

Sequence Viewer

Length: 667 bp
actcttcatcaggaactgattatgtggaacagggtaacatataaagctgaggtggtcaaggtgaatcctcgcccgttctctgtttccgcaaattatgtagatgtcaggtactacttggagcctattactccattgcaggttagtggcatagatgacaaaggcctccccacaggggaccttccagaggaaggcatagaggccttccactcgctgtacgagagactatcctcgtacctggtggaaaaagaggcatatgatctgatcgcgaccttggaaattgtcaatgaggagttctctgaccaagaacaagaagatgacgaacagattcagctagctccggcagcgctggacgatacccctcctaaggtcagggaccctatcgagaaggtcaatcttggaacagtagatgagcctatggaagtggctattagcgcctatttagagcctagcaaaaaacagaggctcattgacttattactggaattcaaagactacttcaccgatgaatatgaagatatgccaggcctgtcaccggatttggtatgccatcagctacccacactccctgacaagaggcctgtaaagcaagagccgcgaagaatgaactctgagacccaagtcctggtcaaagaggaagttgaaaagatgcacaagtcaagcatcatca
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

222

Amino Acids

25.5

Weight (kDa)

4.48

Isoelectric Point (pI)

52.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 127
AccB7I CCANNNNNTGG 1 cut(s) 622
AccII CGCG 2 cut(s) 266, 595
AciI CCGC 2 cut(s) 87, 593
AcsI RAATTY 1 cut(s) 482
AfaI GTAC 3 cut(s) 110, 215, 233
AfeI AGCGCT 1 cut(s) 345
AfiI CCNNNNNNNGG 6 cut(s) 172, 184, 188, 364, 532, 622
AgsI TTSAA 2 cut(s) 487, 641
AjnI CCWGG 3 cut(s) 234, 520, 621
AluBI AGCT 4 cut(s) 47, 331, 335, 553
AluI AGCT 4 cut(s) 47, 331, 335, 553
Alw26I GTCTC 2 cut(s) 214, 605
AlwNI CAGNNNCTG 1 cut(s) 16
Aor51HI AGCGCT 1 cut(s) 345
AoxI GGCC 4 cut(s) 160, 198, 523, 575
ApeKI GCWGC 1 cut(s) 341
ApoI RAATTY 1 cut(s) 482
Asp700I GAANNNNTTC 1 cut(s) 324
AspLEI GCGC 2 cut(s) 346, 434
AspS9I GGNCC 2 cut(s) 175, 373
AsuHPI GGTGA 3 cut(s) 73, 490, 522
AsuNHI GCTAGC 1 cut(s) 331
AvaII GGWCC 2 cut(s) 175, 373
AxyI CCTNAGG 1 cut(s) 363
BbvCI CCTCAGC 1 cut(s) 48
BbvI GCAGC 1 cut(s) 353
BccI CCATC 1 cut(s) 555
BciT130I CCWGG 3 cut(s) 236, 522, 623
BcoDI GTCTC 2 cut(s) 214, 605
BfaI CTAG 2 cut(s) 332, 447
BfoI RGCGCY 2 cut(s) 347, 435
BfuAI ACCTGC 1 cut(s) 127
BisI GCNGC 2 cut(s) 342, 593
BlsI GCNGC 2 cut(s) 343, 594
Bme1390I CCNGG 3 cut(s) 236, 522, 623
Bme18I GGWCC 2 cut(s) 175, 373
BmgT120I GGNCC 2 cut(s) 175, 373
BmiI GGNNCC 4 cut(s) 120, 176, 374, 375
BmrFI CCNGG 3 cut(s) 236, 522, 623
BmsI GCATC 1 cut(s) 636
BmtI GCTAGC 1 cut(s) 335
BoxI GACNNNNGTC 1 cut(s) 617
BplI GAGNNNNNCTC 2 cut(s) 278, 310
Bpu10I CCTNAGC 1 cut(s) 48
BsaI GGTCTC 1 cut(s) 605
BsaJI CCNNGG 1 cut(s) 270
BsaWI WCCGGW 1 cut(s) 532
BsaXI ACNNNNNCTCC 2 cut(s) 546, 576
Bsc4I CCNNNNNNNGG 6 cut(s) 172, 184, 188, 364, 532, 622
Bse1I ACTGG 1 cut(s) 483
Bse21I CCTNAGG 1 cut(s) 363
Bse3DI GCAATG 1 cut(s) 131
BseBI CCWGG 3 cut(s) 236, 522, 623
BseDI CCNNGG 1 cut(s) 270
BseLI CCNNNNNNNGG 6 cut(s) 172, 184, 188, 364, 532, 622
BseMI GCAATG 1 cut(s) 131
BseMII CTCAG 2 cut(s) 39, 600
BseNI ACTGG 1 cut(s) 483
BseRI GAGGAG 1 cut(s) 302
BseXI GCAGC 1 cut(s) 353
Bsh1236I CGCG 2 cut(s) 266, 595
BshFI GGCC 4 cut(s) 162, 200, 525, 577
BsiSI CCGG 2 cut(s) 338, 533
BslFI GGGAC 2 cut(s) 188, 386
BslI CCNNNNNNNGG 6 cut(s) 172, 184, 188, 364, 532, 622
BsmAI GTCTC 2 cut(s) 214, 605
BsmFI GGGAC 2 cut(s) 188, 386
BsnI GGCC 4 cut(s) 162, 200, 525, 577
Bso31I GGTCTC 1 cut(s) 605
Bsp143I GATC 2 cut(s) 256, 261
Bsp68I TCGCGA 1 cut(s) 266
BspACI CCGC 2 cut(s) 87, 593
BspANI GGCC 4 cut(s) 162, 200, 525, 577
BspCNI CTCAG 2 cut(s) 40, 601
BspFNI CGCG 2 cut(s) 266, 595
BspLI GGNNCC 4 cut(s) 120, 176, 374, 375
BspMI ACCTGC 1 cut(s) 127
BspOI GCTAGC 1 cut(s) 335
BspTNI GGTCTC 1 cut(s) 605
BsrDI GCAATG 1 cut(s) 131
BsrI ACTGG 1 cut(s) 483
BssECI CCNNGG 1 cut(s) 270
BssMI GATC 2 cut(s) 256, 261
BssT1I CCWWGG 1 cut(s) 270
Bst2UI CCWGG 3 cut(s) 236, 522, 623
Bst4CI ACNGT 1 cut(s) 403
Bst6I CTCTTC 1 cut(s) 9
BstC8I GCNNGC 1 cut(s) 333
BstDEI CTNAG 3 cut(s) 48, 363, 609
BstENI CCTNNNNNAGG 1 cut(s) 182
BstFNI CGCG 2 cut(s) 266, 595
BstH2I RGCGCY 2 cut(s) 347, 435
BstHHI GCGC 2 cut(s) 346, 434
BstKTI GATC 2 cut(s) 259, 264
BstMAI GTCTC 2 cut(s) 214, 605
BstMBI GATC 2 cut(s) 256, 261
BstMWI GCNNNNNNNGC 4 cut(s) 341, 431, 583, 592
BstNI CCWGG 3 cut(s) 236, 522, 623
BstPAI GACNNNNGTC 1 cut(s) 617
BstSCI CCNGG 3 cut(s) 234, 520, 621
BstUI CGCG 2 cut(s) 266, 595
BstV1I GCAGC 1 cut(s) 353
Bsu36I CCTNAGG 1 cut(s) 363
BsuRI GGCC 4 cut(s) 162, 200, 525, 577
BtuMI TCGCGA 1 cut(s) 266
BveI ACCTGC 1 cut(s) 127
Cac8I GCNNGC 1 cut(s) 333
CaiI CAGNNNCTG 1 cut(s) 16
CfoI GCGC 2 cut(s) 346, 434
Cfr13I GGNCC 2 cut(s) 175, 373
CsiI ACCWGGT 1 cut(s) 234
Csp6I GTAC 3 cut(s) 109, 214, 232
CviQI GTAC 3 cut(s) 109, 214, 232
DdeI CTNAG 3 cut(s) 48, 363, 609
DpnI GATC 2 cut(s) 258, 263
DpnII GATC 2 cut(s) 256, 261
Eam1104I CTCTTC 1 cut(s) 9
EarI CTCTTC 1 cut(s) 9
Eco130I CCWWGG 1 cut(s) 270
Eco147I AGGCCT 4 cut(s) 162, 200, 525, 577
Eco31I GGTCTC 1 cut(s) 605
Eco47I GGWCC 2 cut(s) 175, 373
Eco47III AGCGCT 1 cut(s) 345
Eco81I CCTNAGG 1 cut(s) 363
EcoNI CCTNNNNNAGG 1 cut(s) 182
EcoO109I RGGNCCY 2 cut(s) 175, 373
EcoRI GAATTC 1 cut(s) 482
EcoRII CCWGG 3 cut(s) 234, 520, 621
EcoT14I CCWWGG 1 cut(s) 270
ErhI CCWWGG 1 cut(s) 270
FaqI GGGAC 2 cut(s) 188, 386
FauNDI CATATG 1 cut(s) 253
Fnu4HI GCNGC 2 cut(s) 342, 593
Fsp4HI GCNGC 2 cut(s) 342, 593
FspBI CTAG 2 cut(s) 332, 447
GlaI GCGC 2 cut(s) 345, 433
GluI GCNGC 2 cut(s) 342, 593
HaeII RGCGCY 2 cut(s) 347, 435
HaeIII GGCC 4 cut(s) 162, 200, 525, 577
HapII CCGG 2 cut(s) 338, 533
HhaI GCGC 2 cut(s) 346, 434
Hin6I GCGC 2 cut(s) 344, 432
HinP1I GCGC 2 cut(s) 344, 432
HinfI GANTC 2 cut(s) 64, 325
HpaII CCGG 2 cut(s) 338, 533
HphI GGTGA 3 cut(s) 73, 490, 522
Hpy188I TCNGA 3 cut(s) 261, 298, 610
Hpy188III TCNNGA 4 cut(s) 11, 182, 265, 382
HpyAV CCTTC 4 cut(s) 182, 188, 211, 379
HpyCH4III ACNGT 1 cut(s) 403
HpyCH4V TGCA 2 cut(s) 136, 649
HpyF10VI GCNNNNNNNGC 4 cut(s) 341, 431, 583, 592
HpyF3I CTNAG 3 cut(s) 48, 363, 609
HspAI GCGC 2 cut(s) 344, 432
KflI GGGWCCC 1 cut(s) 373
Kzo9I GATC 2 cut(s) 256, 261
LmnI GCTCC 2 cut(s) 118, 340
Lsp1109I GCAGC 1 cut(s) 353
LweI GCATC 1 cut(s) 636
MabI ACCWGGT 1 cut(s) 234
MaeI CTAG 2 cut(s) 332, 447
MaeIII GTNAC 2 cut(s) 34, 528
MalI GATC 2 cut(s) 258, 263
MboI GATC 2 cut(s) 256, 261
MboII GAAGA 3 cut(s) 323, 524, 609
MluCI AATT 3 cut(s) 91, 276, 482
MroXI GAANNNNTTC 1 cut(s) 324
MspI CCGG 2 cut(s) 338, 533
MspR9I CCNGG 3 cut(s) 236, 522, 623
MvaI CCWGG 3 cut(s) 236, 522, 623
MvnI CGCG 2 cut(s) 266, 595
MwoI GCNNNNNNNGC 4 cut(s) 341, 431, 583, 592
NdeI CATATG 1 cut(s) 253
NdeII GATC 2 cut(s) 256, 261
NheI GCTAGC 1 cut(s) 331
NlaIV GGNNCC 4 cut(s) 120, 176, 374, 375
NmuCI GTSAC 1 cut(s) 528
NruI TCGCGA 1 cut(s) 266
PceI AGGCCT 4 cut(s) 162, 200, 525, 577
PdmI GAANNNNTTC 1 cut(s) 324
PfeI GAWTC 2 cut(s) 64, 325
PflMI CCANNNNNTGG 1 cut(s) 622
PkrI GCNGC 2 cut(s) 343, 594
PpuMI RGGWCCY 2 cut(s) 175, 373
PshAI GACNNNNGTC 1 cut(s) 617
Psp5II RGGWCCY 2 cut(s) 175, 373
Psp6I CCWGG 3 cut(s) 234, 520, 621
PspGI CCWGG 3 cut(s) 234, 520, 621
PspN4I GGNNCC 4 cut(s) 120, 176, 374, 375
PspPI GGNCC 2 cut(s) 175, 373
PspPPI RGGWCCY 2 cut(s) 175, 373
PstNI CAGNNNCTG 1 cut(s) 16
RruI TCGCGA 1 cut(s) 266
RsaI GTAC 3 cut(s) 110, 215, 233
RsaNI GTAC 3 cut(s) 109, 214, 232
SatI GCNGC 2 cut(s) 342, 593
Sau3AI GATC 2 cut(s) 256, 261
Sau96I GGNCC 2 cut(s) 175, 373
ScrFI CCNGG 3 cut(s) 236, 522, 623
SexAI ACCWGGT 1 cut(s) 234
SfaNI GCATC 1 cut(s) 636
SinI GGWCC 2 cut(s) 175, 373
Sse9I AATT 3 cut(s) 91, 276, 482
SseBI AGGCCT 4 cut(s) 162, 200, 525, 577
SsiI CCGC 2 cut(s) 87, 593
SspMI CTAG 2 cut(s) 332, 447
StuI AGGCCT 4 cut(s) 162, 200, 525, 577
StyD4I CCNGG 3 cut(s) 234, 520, 621
StyI CCWWGG 1 cut(s) 270
TaaI ACNGT 1 cut(s) 403
TaqI TCGA 1 cut(s) 381
TasI AATT 3 cut(s) 91, 276, 482
TauI GCSGC 1 cut(s) 595
TfiI GAWTC 2 cut(s) 64, 325
TseFI GTSAC 1 cut(s) 528
TseI GCWGC 1 cut(s) 341
Tsp45I GTSAC 1 cut(s) 528
TspDTI ATGAA 3 cut(s) 519, 525, 617
Van91I CCANNNNNTGG 1 cut(s) 622
VpaK11BI GGWCC 2 cut(s) 175, 373
XagI CCTNNNNNAGG 1 cut(s) 182
XapI RAATTY 1 cut(s) 482
XmnI GAANNNNTTC 1 cut(s) 324
XspI CTAG 2 cut(s) 332, 447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.