Rroxscaffold_178G00437300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000178
OG0000176
Physical Location & Seq
Reverse (-)
107610 .. 114235
6626 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_178G00437300.1

Sequence Viewer

Length: 1263 bp
ATGAGCTTCACCGAGGCCAACACCGCTATGGTCCAACACATGAGACCTCTATATATCACGGTAAAAGTTGGCGGCACCAAAGTTAGCAAGATTATGGTTGATACCGGAGCTGCCGTTAATGTCATCACTACCGAGGACCATGCAACAACGCTCGAAATCAAGAAAGAGAAAATCCGGTCTACGTCCCTCACGCTCAAGAACTTCGCGGGGACCGCCTATGATCGAGTCGCGACCTTAGAGGCCGTCAATGAAGAACTCTCGATGAGGAACAAGAAGATGAGGGGTTGCTCCAAAGCAGGGCTCCTCATGCTCAAGTCGGGTCGTCATAGCAGTCAAATGGGCACGAAGGTCTTGGATTTGGGACCGGAGATGATTTTGCATGAGCCTCAAGTCCCTAACAAGGGTAGCCCTATCTCCCGTAAAGTCACGAGAGGAGTCCATTTGTTGAGCGAGGCCCCGATAGTGGGCTTGGGCTTGTCCGGCCTGCGCGCGCGCGACCGCTCTTTCATTAAGCCACCGGGGGAGATTCGTAGCAATTCGTCTATCTCAATGAACTCGTTCTCGGTGATGGCGTACTCGCGACGAAGAACCCTCAAATACTCTAGAGCCCTAACGGATGCGCCAGAAACAGGATATCGGGACTCAAAAGACGCCTCATCTATAACTCCGGAGGAGTCACCTCAAGCAAACCCTAGCCTTTCCGGTCGGGCAGAGGCACAGCGGCGGATTTTGGGCAAAGAACAGCGGGAGCCACGACAGGAGCCGCTTCCAAGACCTGTTCGACGCTTACCCCTTCTCCGGCTTCGGGAGCATGGGGGCGGGCTCTTGGTTAACTACATCTTCACCACCGGGTCGGCAGGATTGGCGCCAAGTGCTTCCACGCGACGGCCTACTTCCTCGACAGGACCAAGATTCGGTTTTAAGGAGGAATCATTAGAATGCCCAAAGAATAAGACAAGAATCGGGACATTGTGCTTGTTAAAAAGAAACGTACCTCTCGCACCGGAGGCTCGTGAAGGGTCGCTATCGGCACGGGTTCTTGAACCGCATCGCTCGGAATTAGGTCGGCGCCATCCGTGCCATGACGGGTGTGGCGTTTGGTTCCTCGCGAGGTGCATCCGAAAGAGGTATTCTCTCTTCAACTTCGGAAGCGAGCTATCATCTATGACCCGCACCGGAATCGGGGCCAATTGCATATTGTTCGCAACGCGCAGGAGGTGGAGGATTATTGGAACCAAGTGGGCGCTTGGGCCTATGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

420

Amino Acids

46.43

Weight (kDa)

10.53

Isoelectric Point (pI)

53.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 74, 865, 1068
AccBSI CCGCTC 1 cut(s) 501
AccI GTMKAC 1 cut(s) 179
AccIII TCCGGA 1 cut(s) 667
AcyI GRCGYC 3 cut(s) 651, 866, 1069
AfaI GTAC 2 cut(s) 575, 993
AgsI TTSAA 2 cut(s) 1043, 1141
AluBI AGCT 3 cut(s) 6, 110, 1156
AluI AGCT 3 cut(s) 6, 110, 1156
Alw26I GTCTC 1 cut(s) 37
Aor13HI TCCGGA 1 cut(s) 667
AoxI GGCC 7 cut(s) 15, 240, 453, 481, 887, 1185, 1250
ApeKI GCWGC 1 cut(s) 110
Asp700I GAANNNNTTC 1 cut(s) 557
AspLEI GCGC 9 cut(s) 489, 491, 493, 495, 622, 868, 1071, 1212, 1246
AspS9I GGNCC 8 cut(s) 31, 136, 210, 362, 454, 905, 1185, 1250
AsuC2I CCSGG 2 cut(s) 519, 850
AsuHPI GGTGA 3 cut(s) 577, 669, 835
AvaII GGWCC 5 cut(s) 31, 136, 210, 362, 905
BaeGI GKGCMC 1 cut(s) 344
BanI GGYRCC 3 cut(s) 74, 865, 1068
BanII GRGCYC 3 cut(s) 303, 610, 825
BarI GAAGNNNNNNTAC 2 cut(s) 1121, 1153
BauI CACGAG 2 cut(s) 427, 1011
BbvI GCAGC 1 cut(s) 97
BccI CCATC 2 cut(s) 562, 1080
BceAI ACGGC 3 cut(s) 98, 227, 902
BcgI CGANNNNNNTGC 6 cut(s) 122, 156, 1162, 1183, 1196, 1217
BcnI CCSGG 2 cut(s) 519, 850
BcoDI GTCTC 1 cut(s) 37
BfaI CTAG 2 cut(s) 603, 693
BfoI RGCGCY 3 cut(s) 869, 1072, 1247
BisI GCNGC 4 cut(s) 73, 111, 722, 764
BlsI GCNGC 4 cut(s) 74, 112, 723, 765
Bme1390I CCNGG 2 cut(s) 519, 850
Bme18I GGWCC 5 cut(s) 31, 136, 210, 362, 905
BmgT120I GGNCC 8 cut(s) 31, 136, 210, 362, 454, 905, 1185, 1250
BmrFI CCNGG 2 cut(s) 519, 850
BmsI GCATC 3 cut(s) 607, 1057, 1125
BplI GAGNNNNNCTC 2 cut(s) 1117, 1149
BpuEI CTTGAG 4 cut(s) 179, 296, 372, 666
BpuMI CCSGG 2 cut(s) 519, 850
BsaHI GRCGYC 3 cut(s) 651, 866, 1069
BsaI GGTCTC 1 cut(s) 37
BsaJI CCNNGG 3 cut(s) 12, 132, 518
BsaWI WCCGGW 7 cut(s) 104, 174, 364, 667, 701, 1003, 1175
BsaXI ACNNNNNCTCC 4 cut(s) 99, 129, 780, 810
BseAI TCCGGA 1 cut(s) 667
BseDI CCNNGG 3 cut(s) 12, 132, 518
BseGI GGATG 3 cut(s) 622, 1072, 1116
BsePI GCGCGC 3 cut(s) 487, 489, 491
BseRI GAGGAG 3 cut(s) 293, 447, 686
BseSI GKGCMC 1 cut(s) 344
BseXI GCAGC 1 cut(s) 97
Bsh1285I CGRYCG 2 cut(s) 499, 706
BshFI GGCC 7 cut(s) 17, 242, 455, 483, 889, 1187, 1252
BshNI GGYRCC 3 cut(s) 74, 865, 1068
BsiEI CGRYCG 2 cut(s) 499, 706
BslFI GGGAC 6 cut(s) 169, 223, 375, 377, 653, 979
BsmAI GTCTC 1 cut(s) 37
BsmFI GGGAC 6 cut(s) 169, 223, 375, 377, 653, 979
BsmI GAATGC 1 cut(s) 944
BsnI GGCC 7 cut(s) 17, 242, 455, 483, 889, 1187, 1252
Bso31I GGTCTC 1 cut(s) 37
Bsp1286I GDGCHC 4 cut(s) 303, 344, 610, 825
Bsp13I TCCGGA 1 cut(s) 667
Bsp143I GATC 1 cut(s) 220
Bsp68I TCGCGA 3 cut(s) 230, 580, 1109
BspANI GGCC 7 cut(s) 17, 242, 455, 483, 889, 1187, 1252
BspEI TCCGGA 1 cut(s) 667
BspT107I GGYRCC 3 cut(s) 74, 865, 1068
BspTNI GGTCTC 1 cut(s) 37
BsrBI CCGCTC 1 cut(s) 501
BssECI CCNNGG 3 cut(s) 12, 132, 518
BssHII GCGCGC 3 cut(s) 487, 489, 491
BssMI GATC 1 cut(s) 220
BssNI GRCGYC 3 cut(s) 651, 866, 1069
BssSI CACGAG 2 cut(s) 427, 1011
Bst2BI CACGAG 2 cut(s) 427, 1011
Bst4CI ACNGT 1 cut(s) 61
Bst6I CTCTTC 1 cut(s) 1142
BstACI GRCGYC 3 cut(s) 651, 866, 1069
BstC8I GCNNGC 6 cut(s) 485, 489, 491, 493, 821, 1154
BstDEI CTNAG 1 cut(s) 235
BstF5I GGATG 3 cut(s) 622, 1072, 1116
BstH2I RGCGCY 3 cut(s) 869, 1072, 1247
BstHHI GCGC 9 cut(s) 489, 491, 493, 495, 622, 868, 1071, 1212, 1246
BstKTI GATC 1 cut(s) 223
BstMAI GTCTC 1 cut(s) 37
BstMBI GATC 1 cut(s) 220
BstMCI CGRYCG 2 cut(s) 499, 706
BstMWI GCNNNNNNNGC 9 cut(s) 23, 212, 307, 480, 808, 863, 872, 1007, 1077
BstSCI CCNGG 2 cut(s) 517, 848
BstSLI GKGCMC 1 cut(s) 344
BstV1I GCAGC 1 cut(s) 97
BsuRI GGCC 7 cut(s) 17, 242, 455, 483, 889, 1187, 1252
BtgZI GCGATG 1 cut(s) 1034
BtsCI GGATG 3 cut(s) 622, 1072, 1116
BtuMI TCGCGA 3 cut(s) 230, 580, 1109
Cac8I GCNNGC 6 cut(s) 485, 489, 491, 493, 821, 1154
CfoI GCGC 9 cut(s) 489, 491, 493, 495, 622, 868, 1071, 1212, 1246
Cfr13I GGNCC 8 cut(s) 31, 136, 210, 362, 454, 905, 1185, 1250
CseI GACGC 2 cut(s) 659, 792
Csp6I GTAC 2 cut(s) 574, 992
CviAII CATG 6 cut(s) 40, 140, 307, 380, 812, 1082
CviQI GTAC 2 cut(s) 574, 992
DdeI CTNAG 1 cut(s) 235
DinI GGCGCC 2 cut(s) 867, 1070
DpnI GATC 1 cut(s) 222
DpnII GATC 1 cut(s) 220
Eam1104I CTCTTC 1 cut(s) 1142
EarI CTCTTC 1 cut(s) 1142
EciI GGCGGA 1 cut(s) 739
Eco24I GRGCYC 3 cut(s) 303, 610, 825
Eco31I GGTCTC 1 cut(s) 37
Eco32I GATATC 1 cut(s) 635
Eco47I GGWCC 5 cut(s) 31, 136, 210, 362, 905
EcoO109I RGGNCCY 1 cut(s) 454
EcoRV GATATC 1 cut(s) 635
EcoT38I GRGCYC 3 cut(s) 303, 610, 825
EgeI GGCGCC 2 cut(s) 867, 1070
EheI GGCGCC 2 cut(s) 867, 1070
FaeI CATG 6 cut(s) 43, 143, 310, 383, 815, 1085
FaqI GGGAC 6 cut(s) 169, 223, 375, 377, 653, 979
FatI CATG 6 cut(s) 39, 139, 306, 379, 811, 1081
FauI CCCGC 4 cut(s) 199, 738, 812, 1178
FblI GTMKAC 1 cut(s) 179
Fnu4HI GCNGC 4 cut(s) 73, 111, 722, 764
FokI GGATG 3 cut(s) 629, 1059, 1103
FriOI GRGCYC 3 cut(s) 303, 610, 825
Fsp4HI GCNGC 4 cut(s) 73, 111, 722, 764
FspBI CTAG 2 cut(s) 603, 693
GlaI GCGC 9 cut(s) 488, 490, 492, 494, 621, 867, 1070, 1211, 1245
GluI GCNGC 4 cut(s) 73, 111, 722, 764
HaeII RGCGCY 3 cut(s) 869, 1072, 1247
HaeIII GGCC 7 cut(s) 17, 242, 455, 483, 889, 1187, 1252
HgaI GACGC 2 cut(s) 659, 792
HhaI GCGC 9 cut(s) 489, 491, 493, 495, 622, 868, 1071, 1212, 1246
Hin1I GRCGYC 3 cut(s) 651, 866, 1069
Hin1II CATG 6 cut(s) 43, 143, 310, 383, 815, 1085
Hin6I GCGC 9 cut(s) 487, 489, 491, 493, 620, 866, 1069, 1210, 1244
HinP1I GCGC 9 cut(s) 487, 489, 491, 493, 620, 866, 1069, 1210, 1244
HincII GTYRAC 1 cut(s) 832
HindII GTYRAC 1 cut(s) 832
HinfI GANTC 9 cut(s) 225, 435, 526, 641, 674, 912, 929, 960, 1179
HpaI GTTAAC 1 cut(s) 832
HphI GGTGA 3 cut(s) 577, 669, 835
Hpy166II GTNNAC 2 cut(s) 180, 832
Hpy188I TCNGA 3 cut(s) 1057, 1121, 1148
Hpy8I GTNNAC 2 cut(s) 180, 832
Hpy99I CGWCG 3 cut(s) 585, 786, 888
HpyAV CCTTC 3 cut(s) 340, 803, 1010
HpyCH4III ACNGT 1 cut(s) 61
HpyCH4IV ACGT 2 cut(s) 182, 990
HpyCH4V TGCA 4 cut(s) 143, 379, 1116, 1194
HpyF10VI GCNNNNNNNGC 9 cut(s) 23, 212, 307, 480, 808, 863, 872, 1007, 1077
HpyF3I CTNAG 1 cut(s) 235
HpySE526I ACGT 2 cut(s) 182, 990
Hsp92I GRCGYC 3 cut(s) 651, 866, 1069
Hsp92II CATG 6 cut(s) 43, 143, 310, 383, 815, 1085
HspAI GCGC 9 cut(s) 487, 489, 491, 493, 620, 866, 1069, 1210, 1244
KasI GGCGCC 2 cut(s) 865, 1068
Kpn2I TCCGGA 1 cut(s) 667
KspAI GTTAAC 1 cut(s) 832
Kzo9I GATC 1 cut(s) 220
LmnI GCTCC 6 cut(s) 107, 293, 306, 748, 760, 808
Lsp1109I GCAGC 1 cut(s) 97
LweI GCATC 3 cut(s) 607, 1057, 1125
MaeI CTAG 2 cut(s) 603, 693
MaeII ACGT 2 cut(s) 182, 990
MaeIII GTNAC 2 cut(s) 424, 675
MalI GATC 1 cut(s) 222
MauBI CGCGCGCG 2 cut(s) 489, 491
MbiI CCGCTC 1 cut(s) 501
MboI GATC 1 cut(s) 220
MboII GAAGA 5 cut(s) 263, 286, 597, 832, 1129
MfeI CAATTG 1 cut(s) 1189
MhlI GDGCHC 4 cut(s) 303, 344, 610, 825
MluCI AATT 3 cut(s) 535, 1058, 1189
Mly113I GGCGCC 2 cut(s) 866, 1069
MlyI GAGTC 4 cut(s) 234, 444, 635, 683
MmeI TCCRAC 1 cut(s) 58
MroI TCCGGA 1 cut(s) 667
MroXI GAANNNNTTC 1 cut(s) 557
MseI TTAA 5 cut(s) 117, 510, 831, 921, 980
MslI CAYNNNNRTG 2 cut(s) 26, 937
MspA1I CMGCKG 2 cut(s) 721, 745
MspR9I CCNGG 2 cut(s) 519, 850
MunI CAATTG 1 cut(s) 1189
Mva1269I GAATGC 1 cut(s) 944
MwoI GCNNNNNNNGC 9 cut(s) 23, 212, 307, 480, 808, 863, 872, 1007, 1077
NarI GGCGCC 2 cut(s) 866, 1069
NciI CCSGG 2 cut(s) 519, 850
NdeII GATC 1 cut(s) 220
NlaIII CATG 6 cut(s) 43, 143, 310, 383, 815, 1085
NmuCI GTSAC 2 cut(s) 424, 675
NruI TCGCGA 3 cut(s) 230, 580, 1109
PauI GCGCGC 3 cut(s) 487, 489, 491
PcsI WCGNNNNNNNCGW 2 cut(s) 569, 1092
PctI GAATGC 1 cut(s) 944
PdmI GAANNNNTTC 1 cut(s) 557
PfeI GAWTC 5 cut(s) 526, 912, 929, 960, 1179
PkrI GCNGC 4 cut(s) 74, 112, 723, 765
PleI GAGTC 4 cut(s) 233, 443, 635, 682
PluTI GGCGCC 2 cut(s) 869, 1072
PpsI GAGTC 4 cut(s) 233, 443, 635, 682
PspPI GGNCC 8 cut(s) 31, 136, 210, 362, 454, 905, 1185, 1250
PteI GCGCGC 3 cut(s) 487, 489, 491
RruI TCGCGA 3 cut(s) 230, 580, 1109
RsaI GTAC 2 cut(s) 575, 993
RsaNI GTAC 2 cut(s) 574, 992
RseI CAYNNNNRTG 2 cut(s) 26, 937
SaqAI TTAA 5 cut(s) 117, 510, 831, 921, 980
SatI GCNGC 4 cut(s) 73, 111, 722, 764
Sau3AI GATC 1 cut(s) 220
Sau96I GGNCC 8 cut(s) 31, 136, 210, 362, 454, 905, 1185, 1250
SchI GAGTC 4 cut(s) 234, 444, 635, 683
ScrFI CCNGG 2 cut(s) 519, 850
SduI GDGCHC 4 cut(s) 303, 344, 610, 825
SfaNI GCATC 3 cut(s) 607, 1057, 1125
SfoI GGCGCC 2 cut(s) 867, 1070
SinI GGWCC 5 cut(s) 31, 136, 210, 362, 905
SmiMI CAYNNNNRTG 2 cut(s) 26, 937
SmlI CTYRAG 4 cut(s) 194, 311, 387, 681
SmoI CTYRAG 4 cut(s) 194, 311, 387, 681
Sse9I AATT 3 cut(s) 535, 1058, 1189
SspDI GGCGCC 2 cut(s) 865, 1068
SspMI CTAG 2 cut(s) 603, 693
StyD4I CCNGG 2 cut(s) 517, 848
TaaI ACNGT 1 cut(s) 61
TaiI ACGT 2 cut(s) 185, 993
TaqI TCGA 5 cut(s) 153, 223, 260, 781, 899
TasI AATT 3 cut(s) 535, 1058, 1189
TauI GCSGC 3 cut(s) 75, 724, 766
TfiI GAWTC 5 cut(s) 526, 912, 929, 960, 1179
Tru1I TTAA 5 cut(s) 117, 510, 831, 921, 980
Tru9I TTAA 5 cut(s) 117, 510, 831, 921, 980
TseFI GTSAC 2 cut(s) 424, 675
TseI GCWGC 1 cut(s) 110
Tsp45I GTSAC 2 cut(s) 424, 675
TspDTI ATGAA 3 cut(s) 264, 496, 566
TspGWI ACGGA 2 cut(s) 629, 1065
VpaK11BI GGWCC 5 cut(s) 31, 136, 210, 362, 905
XbaI TCTAGA 1 cut(s) 602
XcmI CCANNNNNNNNNTGG 2 cut(s) 25, 1088
XmiI GTMKAC 1 cut(s) 179
XmnI GAANNNNTTC 1 cut(s) 557
XspI CTAG 2 cut(s) 603, 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.