Rmu_sc0000613.1_g000009

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000613.1
Physical Location & Seq
Reverse (-)
33496 .. 34173
678 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000613.1_g000009.1.cds

Sequence Viewer

Length: 420 bp
atgtggaacagggttactgacaaggctgaggtgatcaaggctgatcctcgtccattccttgtttttgctaattatgtagatgccaggtactacttagagccaatcactctattgcaggtcagtggcatcgacaataagggccgccccacagggcttgctccagcagctttagacgatacaccttcgaaggtcagggaccctactgaaaaggtcaatctcggaacaatcaacgagcctatggaagtggctatttgcgcttatttagagcctaacgagaaacagaggctcatcgacttagtgctagaattcaaggattgcttcgctaaaagatacgaagatatgccaggcctatcaccagacttggtatgccatcagctgccaacactctccgacaagaggcctgtgaagcaagtgccgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

139

Amino Acids

15.7

Weight (kDa)

5.2

Isoelectric Point (pI)

38.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 106
AciI CCGC 1 cut(s) 142
AclWI GGATC 1 cut(s) 38
AcsI RAATTY 1 cut(s) 305
AfaI GTAC 1 cut(s) 89
AfiI CCNNNNNNNGG 1 cut(s) 396
AgsI TTSAA 1 cut(s) 310
AjnI CCWGG 2 cut(s) 83, 343
AluBI AGCT 2 cut(s) 167, 376
AluI AGCT 2 cut(s) 167, 376
AlwI GGATC 1 cut(s) 38
AoxI GGCC 3 cut(s) 139, 346, 398
ApeKI GCWGC 2 cut(s) 164, 376
ApoI RAATTY 1 cut(s) 305
AspLEI GCGC 1 cut(s) 257
AspS9I GGNCC 2 cut(s) 139, 196
AsuHPI GGTGA 2 cut(s) 43, 345
AsuII TTCGAA 1 cut(s) 185
AvaII GGWCC 1 cut(s) 196
BbvCI CCTCAGC 1 cut(s) 27
BbvI GCAGC 2 cut(s) 176, 363
BccI CCATC 1 cut(s) 378
BceAI ACGGC 1 cut(s) 400
BciT130I CCWGG 2 cut(s) 85, 345
BclI TGATCA 1 cut(s) 33
BfaI CTAG 1 cut(s) 302
BfuAI ACCTGC 1 cut(s) 106
BisI GCNGC 3 cut(s) 142, 165, 377
BlsI GCNGC 3 cut(s) 143, 166, 378
Bme1390I CCNGG 2 cut(s) 85, 345
Bme18I GGWCC 1 cut(s) 196
BmgT120I GGNCC 2 cut(s) 139, 196
BmiI GGNNCC 2 cut(s) 197, 198
BmrFI CCNGG 2 cut(s) 85, 345
BmsI GCATC 2 cut(s) 70, 135
BpmI CTGGAG 1 cut(s) 144
Bpu10I CCTNAGC 1 cut(s) 27
Bpu14I TTCGAA 1 cut(s) 185
Bsc4I CCNNNNNNNGG 1 cut(s) 396
BseBI CCWGG 2 cut(s) 85, 345
BseLI CCNNNNNNNGG 1 cut(s) 396
BseMII CTCAG 1 cut(s) 18
BseXI GCAGC 2 cut(s) 176, 363
BshFI GGCC 3 cut(s) 141, 348, 400
BslFI GGGAC 1 cut(s) 209
BslI CCNNNNNNNGG 1 cut(s) 396
BsmFI GGGAC 1 cut(s) 209
BsnI GGCC 3 cut(s) 141, 348, 400
Bsp119I TTCGAA 1 cut(s) 185
Bsp143I GATC 2 cut(s) 33, 43
BspACI CCGC 1 cut(s) 142
BspANI GGCC 3 cut(s) 141, 348, 400
BspCNI CTCAG 1 cut(s) 19
BspLI GGNNCC 2 cut(s) 197, 198
BspMI ACCTGC 1 cut(s) 106
BspPI GGATC 1 cut(s) 38
BspT104I TTCGAA 1 cut(s) 185
BssMI GATC 2 cut(s) 33, 43
Bst2UI CCWGG 2 cut(s) 85, 345
BstBI TTCGAA 1 cut(s) 185
BstC8I GCNNGC 1 cut(s) 156
BstDEI CTNAG 3 cut(s) 27, 94, 295
BstHHI GCGC 1 cut(s) 257
BstKTI GATC 2 cut(s) 36, 46
BstMBI GATC 2 cut(s) 33, 43
BstMWI GCNNNNNNNGC 3 cut(s) 164, 254, 406
BstNI CCWGG 2 cut(s) 85, 345
BstSCI CCNGG 2 cut(s) 83, 343
BstV1I GCAGC 2 cut(s) 176, 363
BsuRI GGCC 3 cut(s) 141, 348, 400
BtsIMutI CAGTG 1 cut(s) 127
BveI ACCTGC 1 cut(s) 106
Cac8I GCNNGC 1 cut(s) 156
CfoI GCGC 1 cut(s) 257
Cfr13I GGNCC 2 cut(s) 139, 196
Csp6I GTAC 1 cut(s) 88
CspCI CAANNNNNGTGG 2 cut(s) 136, 171
CviQI GTAC 1 cut(s) 88
DdeI CTNAG 3 cut(s) 27, 94, 295
DpnI GATC 2 cut(s) 35, 45
DpnII GATC 2 cut(s) 33, 43
Eco147I AGGCCT 2 cut(s) 348, 400
Eco47I GGWCC 1 cut(s) 196
EcoO109I RGGNCCY 1 cut(s) 196
EcoRI GAATTC 1 cut(s) 305
EcoRII CCWGG 2 cut(s) 83, 343
FaiI YATR 4 cut(s) 75, 239, 341, 367
FalI AAGNNNNNCTT 2 cut(s) 302, 334
FaqI GGGAC 1 cut(s) 209
FbaI TGATCA 1 cut(s) 33
Fnu4HI GCNGC 3 cut(s) 142, 165, 377
Fsp4HI GCNGC 3 cut(s) 142, 165, 377
FspBI CTAG 1 cut(s) 302
GlaI GCGC 1 cut(s) 256
GluI GCNGC 3 cut(s) 142, 165, 377
GsuI CTGGAG 1 cut(s) 144
HaeIII GGCC 3 cut(s) 141, 348, 400
HhaI GCGC 1 cut(s) 257
Hin6I GCGC 1 cut(s) 255
HinP1I GCGC 1 cut(s) 255
HphI GGTGA 2 cut(s) 43, 345
Hpy188I TCNGA 2 cut(s) 221, 391
HpyAV CCTTC 2 cut(s) 181, 192
HpyCH4V TGCA 1 cut(s) 115
HpyF10VI GCNNNNNNNGC 3 cut(s) 164, 254, 406
HpyF3I CTNAG 3 cut(s) 27, 94, 295
HspAI GCGC 1 cut(s) 255
KflI GGGWCCC 1 cut(s) 196
Ksp22I TGATCA 1 cut(s) 33
Kzo9I GATC 2 cut(s) 33, 43
LmnI GCTCC 1 cut(s) 163
Lsp1109I GCAGC 2 cut(s) 176, 363
LweI GCATC 2 cut(s) 70, 135
MaeI CTAG 1 cut(s) 302
MaeIII GTNAC 1 cut(s) 13
MalI GATC 2 cut(s) 35, 45
MboI GATC 2 cut(s) 33, 43
MboII GAAGA 1 cut(s) 347
MluCI AATT 2 cut(s) 70, 305
MmeI TCCRAC 1 cut(s) 414
MnlI CCTC 4 cut(s) 22, 57, 276, 390
MspA1I CMGCKG 1 cut(s) 376
MspR9I CCNGG 2 cut(s) 85, 345
MvaI CCWGG 2 cut(s) 85, 345
MwoI GCNNNNNNNGC 3 cut(s) 164, 254, 406
NdeII GATC 2 cut(s) 33, 43
NlaIV GGNNCC 2 cut(s) 197, 198
NspV TTCGAA 1 cut(s) 185
PceI AGGCCT 2 cut(s) 348, 400
PkrI GCNGC 3 cut(s) 143, 166, 378
PpuMI RGGWCCY 1 cut(s) 196
Psp5II RGGWCCY 1 cut(s) 196
Psp6I CCWGG 2 cut(s) 83, 343
PspGI CCWGG 2 cut(s) 83, 343
PspN4I GGNNCC 2 cut(s) 197, 198
PspPI GGNCC 2 cut(s) 139, 196
PspPPI RGGWCCY 1 cut(s) 196
PvuII CAGCTG 1 cut(s) 376
RsaI GTAC 1 cut(s) 89
RsaNI GTAC 1 cut(s) 88
SatI GCNGC 3 cut(s) 142, 165, 377
Sau3AI GATC 2 cut(s) 33, 43
Sau96I GGNCC 2 cut(s) 139, 196
ScrFI CCNGG 2 cut(s) 85, 345
SetI ASST 8 cut(s) 33, 89, 120, 169, 184, 192, 213, 378
SfaNI GCATC 2 cut(s) 70, 135
SfuI TTCGAA 1 cut(s) 185
SinI GGWCC 1 cut(s) 196
Sse9I AATT 2 cut(s) 70, 305
SseBI AGGCCT 2 cut(s) 348, 400
SsiI CCGC 1 cut(s) 142
SspMI CTAG 1 cut(s) 302
StuI AGGCCT 2 cut(s) 348, 400
StyD4I CCNGG 2 cut(s) 83, 343
TaqI TCGA 3 cut(s) 129, 185, 291
TasI AATT 2 cut(s) 70, 305
TauI GCSGC 1 cut(s) 144
TscAI CASTG 1 cut(s) 127
TseI GCWGC 2 cut(s) 164, 376
TspRI CASTG 1 cut(s) 127
VpaK11BI GGWCC 1 cut(s) 196
XapI RAATTY 1 cut(s) 305
XspI CTAG 1 cut(s) 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.