Rmu_sc0002934.1_g000006

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002934.1
Physical Location & Seq
Forward (+)
13964 .. 14548
585 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002934.1_g000006.1.cds

Sequence Viewer

Length: 468 bp
atgagcttcacaagaccaacacctgctatggtccagcacatgcggcctttgtatatcacagcagagattagcagcaccaaggttagcaaaatcatggttggagcagcggtcaatgtcattactataagaaccatgcaactgttaggaatcaagaaagagaagatccagtccatgtccctcacgcttaaaaactccgcgggcactgtaacgaagacattaggcctactattcctacgcattaaagttaggctcgctgaaggcatttatgttactgataaggctgaggtgattaaggctgatcctcgcccattccttgtttctgtgaattatgtagatgctaggtactacttggagccaattgctccattgcaggtcagtgtcatcgacaacaaaggctgccttataggggtgacggcctctgaattagcacacctactaaaaggctcggccatactatgccccacctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

155

Amino Acids

16.92

Weight (kDa)

9.76

Isoelectric Point (pI)

24.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 31
Acc36I ACCTGC 2 cut(s) 31, 361
AccII CGCG 1 cut(s) 197
AciI CCGC 4 cut(s) 43, 107, 195, 197
AclWI GGATC 2 cut(s) 157, 293
AcoI YGGCCR 1 cut(s) 447
AcuI CTGAAG 1 cut(s) 276
AfaI GTAC 1 cut(s) 344
AfiI CCNNNNNNNGG 1 cut(s) 406
AluBI AGCT 1 cut(s) 6
AluI AGCT 1 cut(s) 6
AlwI GGATC 2 cut(s) 157, 293
AoxI GGCC 4 cut(s) 44, 220, 414, 447
ApeKI GCWGC 3 cut(s) 72, 104, 396
AspS9I GGNCC 1 cut(s) 31
AsuHPI GGTGA 2 cut(s) 298, 421
AvaII GGWCC 1 cut(s) 31
BaeGI GKGCMC 1 cut(s) 203
BbsI GAAGAC 1 cut(s) 218
BbvCI CCTCAGC 1 cut(s) 282
BbvI GCAGC 3 cut(s) 84, 116, 383
BceAI ACGGC 1 cut(s) 429
BfaI CTAG 1 cut(s) 339
BfuAI ACCTGC 2 cut(s) 31, 361
BisI GCNGC 4 cut(s) 44, 73, 105, 397
BlsI GCNGC 4 cut(s) 45, 74, 106, 398
Bme18I GGWCC 1 cut(s) 31
BmgT120I GGNCC 1 cut(s) 31
BmiI GGNNCC 1 cut(s) 354
BmsI GCATC 1 cut(s) 325
BpiI GAAGAC 1 cut(s) 218
Bpu10I CCTNAGC 1 cut(s) 282
BsaJI CCNNGG 2 cut(s) 78, 195
BsaXI ACNNNNNCTCC 2 cut(s) 93, 123
Bsc4I CCNNNNNNNGG 1 cut(s) 406
Bse1I ACTGG 1 cut(s) 166
Bse3DI GCAATG 1 cut(s) 365
BseDI CCNNGG 2 cut(s) 78, 195
BseLI CCNNNNNNNGG 1 cut(s) 406
BseMI GCAATG 1 cut(s) 365
BseMII CTCAG 1 cut(s) 273
BseNI ACTGG 1 cut(s) 166
BseSI GKGCMC 1 cut(s) 203
BseXI GCAGC 3 cut(s) 84, 116, 383
Bsh1236I CGCG 1 cut(s) 197
BshFI GGCC 4 cut(s) 46, 222, 416, 449
BslFI GGGAC 1 cut(s) 160
BslI CCNNNNNNNGG 1 cut(s) 406
BsmFI GGGAC 1 cut(s) 160
BsnI GGCC 4 cut(s) 46, 222, 416, 449
Bsp1286I GDGCHC 1 cut(s) 203
Bsp143I GATC 2 cut(s) 162, 298
BspACI CCGC 4 cut(s) 43, 107, 195, 197
BspANI GGCC 4 cut(s) 46, 222, 416, 449
BspCNI CTCAG 1 cut(s) 274
BspFNI CGCG 1 cut(s) 197
BspLI GGNNCC 1 cut(s) 354
BspMI ACCTGC 2 cut(s) 31, 361
BspPI GGATC 2 cut(s) 157, 293
BsrDI GCAATG 1 cut(s) 365
BsrI ACTGG 1 cut(s) 166
BssECI CCNNGG 2 cut(s) 78, 195
BssMI GATC 2 cut(s) 162, 298
BssT1I CCWWGG 1 cut(s) 78
Bst4CI ACNGT 2 cut(s) 141, 205
BstC8I GCNNGC 2 cut(s) 199, 252
BstDEI CTNAG 1 cut(s) 282
BstDSI CCRYGG 1 cut(s) 195
BstFNI CGCG 1 cut(s) 197
BstKTI GATC 2 cut(s) 165, 301
BstMBI GATC 2 cut(s) 162, 298
BstMWI GCNNNNNNNGC 1 cut(s) 43
BstNSI RCATGY 1 cut(s) 43
BstSLI GKGCMC 1 cut(s) 203
BstUI CGCG 1 cut(s) 197
BstV1I GCAGC 3 cut(s) 84, 116, 383
BstV2I GAAGAC 1 cut(s) 218
BstX2I RGATCY 1 cut(s) 162
BstYI RGATCY 1 cut(s) 162
BsuRI GGCC 4 cut(s) 46, 222, 416, 449
BtgI CCRYGG 1 cut(s) 195
BtsIMutI CAGTG 2 cut(s) 201, 382
BveI ACCTGC 2 cut(s) 31, 361
Cac8I GCNNGC 2 cut(s) 199, 252
Cfr13I GGNCC 1 cut(s) 31
Cfr42I CCGCGG 1 cut(s) 198
Csp6I GTAC 1 cut(s) 343
CviAII CATG 4 cut(s) 40, 94, 133, 172
CviQI GTAC 1 cut(s) 343
DdeI CTNAG 1 cut(s) 282
DpnI GATC 2 cut(s) 164, 300
DpnII GATC 2 cut(s) 162, 298
EaeI YGGCCR 1 cut(s) 447
Eco130I CCWWGG 1 cut(s) 78
Eco147I AGGCCT 1 cut(s) 222
Eco47I GGWCC 1 cut(s) 31
Eco57I CTGAAG 1 cut(s) 276
EcoT14I CCWWGG 1 cut(s) 78
ErhI CCWWGG 1 cut(s) 78
FaeI CATG 4 cut(s) 43, 97, 136, 175
FalI AAGNNNNNCTT 2 cut(s) 384, 416
FaqI GGGAC 1 cut(s) 160
FatI CATG 4 cut(s) 39, 93, 132, 171
FauI CCCGC 1 cut(s) 190
Fnu4HI GCNGC 4 cut(s) 44, 73, 105, 397
Fsp4HI GCNGC 4 cut(s) 44, 73, 105, 397
FspBI CTAG 1 cut(s) 339
GluI GCNGC 4 cut(s) 44, 73, 105, 397
HaeIII GGCC 4 cut(s) 46, 222, 416, 449
Hin1II CATG 4 cut(s) 43, 97, 136, 175
HinfI GANTC 1 cut(s) 147
HphI GGTGA 2 cut(s) 298, 421
Hpy188I TCNGA 1 cut(s) 421
Hpy188III TCNNGA 1 cut(s) 151
HpyAV CCTTC 1 cut(s) 251
HpyCH4III ACNGT 2 cut(s) 141, 205
HpyCH4V TGCA 2 cut(s) 136, 370
HpyF10VI GCNNNNNNNGC 1 cut(s) 43
HpyF3I CTNAG 1 cut(s) 282
Hsp92II CATG 4 cut(s) 43, 97, 136, 175
KspI CCGCGG 1 cut(s) 198
Kzo9I GATC 2 cut(s) 162, 298
LmnI GCTCC 3 cut(s) 101, 352, 367
LpnPI CCDG 4 cut(s) 36, 47, 179, 356
Lsp1109I GCAGC 3 cut(s) 84, 116, 383
LweI GCATC 1 cut(s) 325
MaeI CTAG 1 cut(s) 339
MaeIII GTNAC 3 cut(s) 205, 268, 409
MalI GATC 2 cut(s) 164, 300
MboI GATC 2 cut(s) 162, 298
MboII GAAGA 2 cut(s) 172, 223
MfeI CAATTG 1 cut(s) 357
MflI RGATCY 1 cut(s) 162
MhlI GDGCHC 1 cut(s) 203
MluCI AATT 3 cut(s) 325, 357, 422
MmeI TCCRAC 1 cut(s) 79
MnlI CCTC 4 cut(s) 188, 277, 312, 427
MseI TTAA 3 cut(s) 186, 240, 291
MspA1I CMGCKG 2 cut(s) 107, 197
MunI CAATTG 1 cut(s) 357
MvnI CGCG 1 cut(s) 197
MwoI GCNNNNNNNGC 1 cut(s) 43
NdeII GATC 2 cut(s) 162, 298
NlaIII CATG 4 cut(s) 43, 97, 136, 175
NlaIV GGNNCC 1 cut(s) 354
NmeAIII GCCGAG 1 cut(s) 425
NmuCI GTSAC 1 cut(s) 409
NspI RCATGY 1 cut(s) 43
PaqCI CACCTGC 1 cut(s) 31
PceI AGGCCT 1 cut(s) 222
PfeI GAWTC 1 cut(s) 147
PkrI GCNGC 4 cut(s) 45, 74, 106, 398
PspN4I GGNNCC 1 cut(s) 354
PspPI GGNCC 1 cut(s) 31
PsuI RGATCY 1 cut(s) 162
RsaI GTAC 1 cut(s) 344
RsaNI GTAC 1 cut(s) 343
SacII CCGCGG 1 cut(s) 198
SaqAI TTAA 3 cut(s) 186, 240, 291
SatI GCNGC 4 cut(s) 44, 73, 105, 397
Sau3AI GATC 2 cut(s) 162, 298
Sau96I GGNCC 1 cut(s) 31
SduI GDGCHC 1 cut(s) 203
SetI ASST 8 cut(s) 8, 25, 84, 288, 344, 375, 435, 467
SfaNI GCATC 1 cut(s) 325
Sfr303I CCGCGG 1 cut(s) 198
SgrBI CCGCGG 1 cut(s) 198
SinI GGWCC 1 cut(s) 31
Sse9I AATT 3 cut(s) 325, 357, 422
SseBI AGGCCT 1 cut(s) 222
SsiI CCGC 4 cut(s) 43, 107, 195, 197
SspMI CTAG 1 cut(s) 339
StuI AGGCCT 1 cut(s) 222
StyI CCWWGG 1 cut(s) 78
TaaI ACNGT 2 cut(s) 141, 205
TaqI TCGA 1 cut(s) 384
TasI AATT 3 cut(s) 325, 357, 422
TauI GCSGC 1 cut(s) 46
TfiI GAWTC 1 cut(s) 147
Tru1I TTAA 3 cut(s) 186, 240, 291
Tru9I TTAA 3 cut(s) 186, 240, 291
TscAI CASTG 2 cut(s) 208, 382
TseFI GTSAC 1 cut(s) 409
TseI GCWGC 3 cut(s) 72, 104, 396
Tsp45I GTSAC 1 cut(s) 409
TspRI CASTG 2 cut(s) 208, 382
VpaK11BI GGWCC 1 cut(s) 31
XceI RCATGY 1 cut(s) 43
XspI CTAG 1 cut(s) 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.