Rroxscaffold_4G00306470

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000176
Physical Location & Seq
Reverse (-)
27339983 .. 27341738
1756 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00306470.1

Sequence Viewer

Length: 924 bp
ATGGTTCCCCGCAGCCTTCAAAAACAAGCGAGCTCCTCAACAGGGGCATCTAAGCCCGGTGTTTTTTGCAAAATCGCCGAAGAGAGAACACCTCCGCTAGCTCGAAAGGAGGGTTCGCCGACTCGGCGACCACATGTCGTGCACATGTTGTTTCGCGAAGAACCGAAGCTAAACCTTCGGTTTTTGAGAGATTTGGGGGCGGGGACAAGACTACCGATACTTTGCGGTGTAGACCAAAAAGGGTCCGAGTGTAGTAGTCGCTCCCCAGAGGTAAGCATAGCAAGGGAACCGAAGTCGGACTTCCCTAGCGAGGCTCCCGTCCGTGGCATCGATGACAAGGGCCGCCCCGTGGGGGTGACGGCCTACGAATTGGCACGGTGGGGGCTTACGCTCTCAAAAGAAGGCATGGAAAGGCCTCGGCCAAGCCGTGCCCAAACCCTTAAACGATTAATGGATTACGACCTCCCGGAGGAAGGGATAGAGGCCTTCCACTCGCCGTACGAAAGATTATCATCGTACTTAGTGGAAAAAGAGGCTTATGATCGAGTAGCGACCTTAGAGGCCGTCAACGAAGAACTCTCGATCGAGAACAAGAAGATGAGCTTGCTCCGGCGCCTGGACGATACACCCCCTAAGGTCGGAGACCCTACCGAGAAGGTCAATCTTGGAATAGCCGATGCGCCTATGGAAGTGGCTATCAACGCTTACTTAGAGCCTAGCGAGAAACAGAGGCTCATTGACTTATTACTAGAATTCAAAGATCGCTTCGCGGAGAAGTATAAAGACATGCCGGCTACGTCACCGGACTTGGTTTGCCATCAACCGCCAACACTCCCCGACAAGAGGCACCGTGAAACAAGAACCACGAAGAATGAATTCGAAACCCAAGTCCTCGTCAAGGAGGAAGTCGAAAAAAATGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

307

Amino Acids

34.66

Weight (kDa)

6.58

Isoelectric Point (pI)

60.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 612, 846
AccI GTMKAC 1 cut(s) 231
AccII CGCG 2 cut(s) 156, 770
AciI CCGC 7 cut(s) 10, 95, 200, 225, 343, 770, 824
AcoI YGGCCR 1 cut(s) 419
AcsI RAATTY 2 cut(s) 752, 875
AcyI GRCGYC 1 cut(s) 613
AfaI GTAC 2 cut(s) 500, 518
AflIII ACRYGT 2 cut(s) 133, 144
AgsI TTSAA 2 cut(s) 20, 757
AhdI GACNNNNNGTC 1 cut(s) 134
AjnI CCWGG 1 cut(s) 615
AluBI AGCT 4 cut(s) 33, 101, 169, 603
AluI AGCT 4 cut(s) 33, 101, 169, 603
Alw21I GWGCWC 2 cut(s) 35, 144
Alw26I GTCTC 1 cut(s) 636
Alw44I GTGCAC 1 cut(s) 140
AoxI GGCC 6 cut(s) 340, 360, 413, 419, 483, 561
ApaLI GTGCAC 1 cut(s) 140
ApeKI GCWGC 1 cut(s) 12
ApoI RAATTY 2 cut(s) 752, 875
ArsI GACNNNNNNTTYG 2 cut(s) 873, 905
AseI ATTAAT 1 cut(s) 449
Asp700I GAANNNNTTC 1 cut(s) 875
AspLEI GCGC 2 cut(s) 615, 682
AspS9I GGNCC 2 cut(s) 243, 340
AsuC2I CCSGG 2 cut(s) 57, 467
AsuHPI GGTGA 2 cut(s) 367, 792
AsuII TTCGAA 1 cut(s) 879
AsuNHI GCTAGC 1 cut(s) 97
AvaII GGWCC 1 cut(s) 243
AxyI CCTNAGG 1 cut(s) 633
BaeGI GKGCMC 2 cut(s) 144, 433
BanI GGYRCC 2 cut(s) 612, 846
BanII GRGCYC 1 cut(s) 35
Bbv12I GWGCWC 2 cut(s) 35, 144
BbvI GCAGC 1 cut(s) 24
BccI CCATC 1 cut(s) 825
BceAI ACGGC 4 cut(s) 375, 411, 481, 548
BcgI CGANNNNNNTGC 1 cut(s) 899
BciT130I CCWGG 1 cut(s) 617
BcnI CCSGG 2 cut(s) 57, 467
BcoDI GTCTC 1 cut(s) 636
BfaI CTAG 4 cut(s) 98, 306, 717, 749
BfoI RGCGCY 1 cut(s) 616
BglI GCCNNNNNGGC 1 cut(s) 124
BisI GCNGC 2 cut(s) 13, 343
BlsI GCNGC 2 cut(s) 14, 344
Bme1390I CCNGG 3 cut(s) 57, 467, 617
Bme18I GGWCC 1 cut(s) 243
BmeRI GACNNNNNGTC 1 cut(s) 134
BmgT120I GGNCC 2 cut(s) 243, 340
BmiI GGNNCC 6 cut(s) 6, 244, 288, 315, 614, 848
BmrFI CCNGG 3 cut(s) 57, 467, 617
BmsI GCATC 3 cut(s) 56, 336, 667
BmtI GCTAGC 1 cut(s) 101
BplI GAGNNNNNCTC 2 cut(s) 76, 108
Bpu14I TTCGAA 1 cut(s) 879
BpuMI CCSGG 2 cut(s) 57, 467
Bsa29I ATCGAT 1 cut(s) 330
BsaBI GATNNNNATC 1 cut(s) 511
BsaHI GRCGYC 1 cut(s) 613
BsaI GGTCTC 1 cut(s) 636
BsaJI CCNNGG 3 cut(s) 322, 348, 416
BsaWI WCCGGW 1 cut(s) 802
Bse118I RCCGGY 1 cut(s) 790
Bse21I CCTNAGG 1 cut(s) 633
Bse8I GATNNNNATC 1 cut(s) 511
BseBI CCWGG 1 cut(s) 617
BseCI ATCGAT 1 cut(s) 330
BseDI CCNNGG 3 cut(s) 322, 348, 416
BseJI GATNNNNATC 1 cut(s) 511
BseRI GAGGAG 1 cut(s) 25
BseSI GKGCMC 2 cut(s) 144, 433
BseXI GCAGC 1 cut(s) 24
Bsh1236I CGCG 2 cut(s) 156, 770
Bsh1285I CGRYCG 1 cut(s) 585
BshFI GGCC 6 cut(s) 342, 362, 415, 421, 485, 563
BshNI GGYRCC 2 cut(s) 612, 846
BshVI ATCGAT 1 cut(s) 330
BsiEI CGRYCG 1 cut(s) 585
BsiHKAI GWGCWC 2 cut(s) 35, 144
BsiSI CCGG 5 cut(s) 57, 467, 610, 791, 803
BsiWI CGTACG 1 cut(s) 498
BslFI GGGAC 1 cut(s) 217
BsmAI GTCTC 1 cut(s) 636
BsmFI GGGAC 1 cut(s) 217
BsnI GGCC 6 cut(s) 342, 362, 415, 421, 485, 563
Bso31I GGTCTC 1 cut(s) 636
Bsp119I TTCGAA 1 cut(s) 879
Bsp1286I GDGCHC 3 cut(s) 35, 144, 433
Bsp143I GATC 3 cut(s) 541, 582, 760
Bsp68I TCGCGA 1 cut(s) 156
BspACI CCGC 7 cut(s) 10, 95, 200, 225, 343, 770, 824
BspANI GGCC 6 cut(s) 342, 362, 415, 421, 485, 563
BspDI ATCGAT 1 cut(s) 330
BspFNI CGCG 2 cut(s) 156, 770
BspLI GGNNCC 6 cut(s) 6, 244, 288, 315, 614, 848
BspOI GCTAGC 1 cut(s) 101
BspT104I TTCGAA 1 cut(s) 879
BspT107I GGYRCC 2 cut(s) 612, 846
BspTNI GGTCTC 1 cut(s) 636
BsrFI RCCGGY 1 cut(s) 790
BssAI RCCGGY 1 cut(s) 790
BssECI CCNNGG 3 cut(s) 322, 348, 416
BssMI GATC 3 cut(s) 541, 582, 760
BssNI GRCGYC 1 cut(s) 613
Bst2UI CCWGG 1 cut(s) 617
Bst4CI ACNGT 2 cut(s) 378, 851
Bst6I CTCTTC 1 cut(s) 75
BstACI GRCGYC 1 cut(s) 613
BstBI TTCGAA 1 cut(s) 879
BstC8I GCNNGC 4 cut(s) 31, 99, 605, 792
BstDEI CTNAG 5 cut(s) 51, 520, 556, 633, 709
BstDSI CCRYGG 2 cut(s) 322, 348
BstENI CCTNNNNNAGG 2 cut(s) 467, 896
BstFNI CGCG 2 cut(s) 156, 770
BstH2I RGCGCY 1 cut(s) 616
BstHHI GCGC 2 cut(s) 615, 682
BstKTI GATC 3 cut(s) 544, 585, 763
BstMAI GTCTC 1 cut(s) 636
BstMBI GATC 3 cut(s) 541, 582, 760
BstMCI CGRYCG 1 cut(s) 585
BstMWI GCNNNNNNNGC 2 cut(s) 124, 701
BstNI CCWGG 1 cut(s) 617
BstNSI RCATGY 3 cut(s) 137, 148, 790
BstSCI CCNGG 3 cut(s) 55, 465, 615
BstSLI GKGCMC 2 cut(s) 144, 433
BstUI CGCG 2 cut(s) 156, 770
BstV1I GCAGC 1 cut(s) 24
Bsu15I ATCGAT 1 cut(s) 330
Bsu36I CCTNAGG 1 cut(s) 633
BsuRI GGCC 6 cut(s) 342, 362, 415, 421, 485, 563
BsuTUI ATCGAT 1 cut(s) 330
BtgI CCRYGG 2 cut(s) 322, 348
BtuMI TCGCGA 1 cut(s) 156
Cac8I GCNNGC 4 cut(s) 31, 99, 605, 792
CfoI GCGC 2 cut(s) 615, 682
Cfr10I RCCGGY 1 cut(s) 790
Cfr13I GGNCC 2 cut(s) 243, 340
ClaI ATCGAT 1 cut(s) 330
Csp6I GTAC 2 cut(s) 499, 517
CviAII CATG 4 cut(s) 134, 145, 406, 787
CviQI GTAC 2 cut(s) 499, 517
DdeI CTNAG 5 cut(s) 51, 520, 556, 633, 709
DinI GGCGCC 1 cut(s) 614
DpnI GATC 3 cut(s) 543, 584, 762
DpnII GATC 3 cut(s) 541, 582, 760
DriI GACNNNNNGTC 1 cut(s) 134
EaeI YGGCCR 1 cut(s) 419
Eam1104I CTCTTC 1 cut(s) 75
Eam1105I GACNNNNNGTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 75
Ecl136II GAGCTC 1 cut(s) 33
Eco147I AGGCCT 2 cut(s) 415, 485
Eco24I GRGCYC 1 cut(s) 35
Eco31I GGTCTC 1 cut(s) 636
Eco47I GGWCC 1 cut(s) 243
Eco53kI GAGCTC 1 cut(s) 33
Eco81I CCTNAGG 1 cut(s) 633
EcoICRI GAGCTC 1 cut(s) 33
EcoNI CCTNNNNNAGG 2 cut(s) 467, 896
EcoRI GAATTC 2 cut(s) 752, 875
EcoRII CCWGG 1 cut(s) 615
EcoT22I ATGCAT 1 cut(s) 922
EcoT38I GRGCYC 1 cut(s) 35
EgeI GGCGCC 1 cut(s) 614
EheI GGCGCC 1 cut(s) 614
FaeI CATG 4 cut(s) 137, 148, 409, 790
FaiI YATR 9 cut(s) 135, 146, 278, 407, 540, 686, 780, 788, 922
FalI AAGNNNNNCTT 4 cut(s) 284, 316, 587, 619
FaqI GGGAC 1 cut(s) 217
FatI CATG 4 cut(s) 133, 144, 405, 786
FauI CCCGC 2 cut(s) 17, 193
FblI GTMKAC 1 cut(s) 231
Fnu4HI GCNGC 2 cut(s) 13, 343
FriOI GRGCYC 1 cut(s) 35
Fsp4HI GCNGC 2 cut(s) 13, 343
FspBI CTAG 4 cut(s) 98, 306, 717, 749
GlaI GCGC 2 cut(s) 614, 681
GluI GCNGC 2 cut(s) 13, 343
HaeII RGCGCY 1 cut(s) 616
HaeIII GGCC 6 cut(s) 342, 362, 415, 421, 485, 563
HapII CCGG 5 cut(s) 57, 467, 610, 791, 803
HhaI GCGC 2 cut(s) 615, 682
Hin1I GRCGYC 1 cut(s) 613
Hin1II CATG 4 cut(s) 137, 148, 409, 790
Hin6I GCGC 2 cut(s) 613, 680
HinP1I GCGC 2 cut(s) 613, 680
HincII GTYRAC 1 cut(s) 568
HindII GTYRAC 1 cut(s) 568
HinfI GANTC 1 cut(s) 121
HpaII CCGG 5 cut(s) 57, 467, 610, 791, 803
HphI GGTGA 2 cut(s) 367, 792
Hpy166II GTNNAC 3 cut(s) 142, 232, 568
Hpy188I TCNGA 3 cut(s) 247, 298, 641
Hpy188III TCNNGA 3 cut(s) 155, 580, 586
Hpy8I GTNNAC 3 cut(s) 142, 232, 568
HpyAV CCTTC 6 cut(s) 26, 185, 395, 467, 496, 649
HpyCH4III ACNGT 2 cut(s) 378, 851
HpyCH4IV ACGT 1 cut(s) 797
HpyCH4V TGCA 3 cut(s) 69, 142, 920
HpyF10VI GCNNNNNNNGC 2 cut(s) 124, 701
HpyF3I CTNAG 5 cut(s) 51, 520, 556, 633, 709
HpySE526I ACGT 1 cut(s) 797
Hsp92I GRCGYC 1 cut(s) 613
Hsp92II CATG 4 cut(s) 137, 148, 409, 790
HspAI GCGC 2 cut(s) 613, 680
KasI GGCGCC 1 cut(s) 612
KroI GCCGGC 1 cut(s) 790
KroNI GCCGGC 1 cut(s) 792
Kzo9I GATC 3 cut(s) 541, 582, 760
LmnI GCTCC 4 cut(s) 38, 266, 319, 612
LpnPI CCDG 9 cut(s) 27, 70, 279, 480, 602, 623, 629, 804, 816
Lsp1109I GCAGC 1 cut(s) 24
LweI GCATC 3 cut(s) 56, 336, 667
MaeI CTAG 4 cut(s) 98, 306, 717, 749
MaeII ACGT 1 cut(s) 797
MaeIII GTNAC 2 cut(s) 355, 798
MalI GATC 3 cut(s) 543, 584, 762
MboI GATC 3 cut(s) 541, 582, 760
MboII GAAGA 5 cut(s) 92, 170, 584, 607, 880
MhlI GDGCHC 3 cut(s) 35, 144, 433
MluCI AATT 3 cut(s) 368, 752, 875
Mly113I GGCGCC 1 cut(s) 613
MlyI GAGTC 1 cut(s) 115
MmeI TCCRAC 2 cut(s) 276, 619
Mph1103I ATGCAT 1 cut(s) 922
MroNI GCCGGC 1 cut(s) 790
MroXI GAANNNNTTC 1 cut(s) 875
MseI TTAA 2 cut(s) 441, 449
MspI CCGG 5 cut(s) 57, 467, 610, 791, 803
MspR9I CCNGG 3 cut(s) 57, 467, 617
MvaI CCWGG 1 cut(s) 617
MvnI CGCG 2 cut(s) 156, 770
MwoI GCNNNNNNNGC 2 cut(s) 124, 701
NaeI GCCGGC 1 cut(s) 792
NarI GGCGCC 1 cut(s) 613
NciI CCSGG 2 cut(s) 57, 467
NdeII GATC 3 cut(s) 541, 582, 760
NgoMIV GCCGGC 1 cut(s) 790
NheI GCTAGC 1 cut(s) 97
NlaIII CATG 4 cut(s) 137, 148, 409, 790
NlaIV GGNNCC 6 cut(s) 6, 244, 288, 315, 614, 848
NmeAIII GCCGAG 2 cut(s) 103, 397
NmuCI GTSAC 2 cut(s) 355, 798
NruI TCGCGA 1 cut(s) 156
NsiI ATGCAT 1 cut(s) 922
NspI RCATGY 3 cut(s) 137, 148, 790
NspV TTCGAA 1 cut(s) 879
PceI AGGCCT 2 cut(s) 415, 485
PciI ACATGT 2 cut(s) 133, 144
PcsI WCGNNNNNNNCGW 1 cut(s) 424
PdiI GCCGGC 1 cut(s) 792
PdmI GAANNNNTTC 1 cut(s) 875
Pfl23II CGTACG 1 cut(s) 498
PfoI TCCNGGA 1 cut(s) 465
PkrI GCNGC 2 cut(s) 14, 344
Ple19I CGATCG 1 cut(s) 585
PleI GAGTC 1 cut(s) 115
PluTI GGCGCC 1 cut(s) 616
PpsI GAGTC 1 cut(s) 115
PscI ACATGT 2 cut(s) 133, 144
PshBI ATTAAT 1 cut(s) 449
Psp124BI GAGCTC 1 cut(s) 35
Psp6I CCWGG 1 cut(s) 615
PspGI CCWGG 1 cut(s) 615
PspLI CGTACG 1 cut(s) 498
PspN4I GGNNCC 6 cut(s) 6, 244, 288, 315, 614, 848
PspPI GGNCC 2 cut(s) 243, 340
PvuI CGATCG 1 cut(s) 585
RruI TCGCGA 1 cut(s) 156
RsaI GTAC 2 cut(s) 500, 518
RsaNI GTAC 2 cut(s) 499, 517
SacI GAGCTC 1 cut(s) 35
SaqAI TTAA 2 cut(s) 441, 449
SatI GCNGC 2 cut(s) 13, 343
Sau3AI GATC 3 cut(s) 541, 582, 760
Sau96I GGNCC 2 cut(s) 243, 340
SchI GAGTC 1 cut(s) 115
ScrFI CCNGG 3 cut(s) 57, 467, 617
SduI GDGCHC 3 cut(s) 35, 144, 433
SfaNI GCATC 3 cut(s) 56, 336, 667
SfoI GGCGCC 1 cut(s) 614
SfuI TTCGAA 1 cut(s) 879
SinI GGWCC 1 cut(s) 243
Sse9I AATT 3 cut(s) 368, 752, 875
SseBI AGGCCT 2 cut(s) 415, 485
SsiI CCGC 7 cut(s) 10, 95, 200, 225, 343, 770, 824
SspDI GGCGCC 1 cut(s) 612
SspMI CTAG 4 cut(s) 98, 306, 717, 749
SstI GAGCTC 1 cut(s) 35
StuI AGGCCT 2 cut(s) 415, 485
StyD4I CCNGG 3 cut(s) 55, 465, 615
TaaI ACNGT 2 cut(s) 378, 851
TaiI ACGT 1 cut(s) 800
TaqI TCGA 7 cut(s) 103, 330, 544, 581, 585, 879, 909
TasI AATT 3 cut(s) 368, 752, 875
TauI GCSGC 1 cut(s) 345
Tru1I TTAA 2 cut(s) 441, 449
Tru9I TTAA 2 cut(s) 441, 449
TseFI GTSAC 2 cut(s) 355, 798
TseI GCWGC 1 cut(s) 12
Tsp45I GTSAC 2 cut(s) 355, 798
TspDTI ATGAA 1 cut(s) 888
TspGWI ACGGA 1 cut(s) 311
VneI GTGCAC 1 cut(s) 140
VpaK11BI GGWCC 1 cut(s) 243
VspI ATTAAT 1 cut(s) 449
XagI CCTNNNNNAGG 2 cut(s) 467, 896
XapI RAATTY 2 cut(s) 752, 875
XceI RCATGY 3 cut(s) 137, 148, 790
XmiI GTMKAC 1 cut(s) 231
XmnI GAANNNNTTC 1 cut(s) 875
XspI CTAG 4 cut(s) 98, 306, 717, 749
Zsp2I ATGCAT 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.