Rmu_co8199530.1_g000001

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8199530.1
Physical Location & Seq
Reverse (-)
18 .. 398
381 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8199530.1_g000001.1.cds

Sequence Viewer

Length: 381 bp
atgcctatagcaacactggaatacctcgatgaaggattctccgatcaagaggaggaagaacctatccaactagctccagcggcgctggatgatactcctccaaaggttagagatccaacagagaatgtgaacttggggactgacactgaaccaatggaagtggcaatcagtgcgaacttagagcttgatgaaagacaggggcttcttgacttattgcgggagttcaaggattgcttcgcggagaagtatgaagacatgccaggtttagctcctgagttggtctgccacaagctgccaactgctcctgatcaaaggccagtaagacaagaatccagaagaatgaattcagagactcaaatattggtcaaggaggagtcgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

126

Amino Acids

14.25

Weight (kDa)

4.19

Isoelectric Point (pI)

64.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 239
AciI CCGC 3 cut(s) 80, 217, 239
AclWI GGATC 1 cut(s) 107
AcsI RAATTY 1 cut(s) 343
AgsI TTSAA 1 cut(s) 226
AjnI CCWGG 1 cut(s) 259
AjuI GAANNNNNNNTTGG 2 cut(s) 116, 148
AluBI AGCT 4 cut(s) 74, 184, 269, 292
AluI AGCT 4 cut(s) 74, 184, 269, 292
Alw26I GTCTC 1 cut(s) 344
AlwI GGATC 1 cut(s) 107
AoxI GGCC 1 cut(s) 314
ApeKI GCWGC 1 cut(s) 292
ApoI RAATTY 1 cut(s) 343
Asp700I GAANNNNTTC 1 cut(s) 343
AspLEI GCGC 1 cut(s) 85
BbsI GAAGAC 1 cut(s) 258
BbvI GCAGC 1 cut(s) 279
BciT130I CCWGG 1 cut(s) 261
BclI TGATCA 1 cut(s) 307
BcoDI GTCTC 1 cut(s) 344
BfaI CTAG 1 cut(s) 71
BfmI CTRYAG 1 cut(s) 6
BfoI RGCGCY 1 cut(s) 86
BisI GCNGC 2 cut(s) 81, 293
BlsI GCNGC 2 cut(s) 82, 294
Bme1390I CCNGG 1 cut(s) 261
BmrFI CCNGG 1 cut(s) 261
BpiI GAAGAC 1 cut(s) 258
BpmI CTGGAG 1 cut(s) 60
BsaXI ACNNNNNCTCC 1 cut(s) 362
Bse1I ACTGG 2 cut(s) 21, 317
BseBI CCWGG 1 cut(s) 261
BseGI GGATG 1 cut(s) 94
BseMII CTCAG 1 cut(s) 264
BseNI ACTGG 2 cut(s) 21, 317
BseRI GAGGAG 2 cut(s) 65, 87
BseXI GCAGC 1 cut(s) 279
Bsh1236I CGCG 1 cut(s) 239
BshFI GGCC 1 cut(s) 316
BslFI GGGAC 1 cut(s) 151
BsmAI GTCTC 1 cut(s) 344
BsmFI GGGAC 1 cut(s) 151
BsnI GGCC 1 cut(s) 316
Bsp143I GATC 3 cut(s) 43, 112, 307
BspACI CCGC 3 cut(s) 80, 217, 239
BspANI GGCC 1 cut(s) 316
BspCNI CTCAG 1 cut(s) 265
BspFNI CGCG 1 cut(s) 239
BspPI GGATC 1 cut(s) 107
BsrI ACTGG 2 cut(s) 21, 317
BssMI GATC 3 cut(s) 43, 112, 307
Bst2UI CCWGG 1 cut(s) 261
BstAPI GCANNNNNTGC 1 cut(s) 170
BstDEI CTNAG 2 cut(s) 178, 273
BstF5I GGATG 1 cut(s) 94
BstFNI CGCG 1 cut(s) 239
BstH2I RGCGCY 1 cut(s) 86
BstHHI GCGC 1 cut(s) 85
BstKTI GATC 3 cut(s) 46, 115, 310
BstMAI GTCTC 1 cut(s) 344
BstMBI GATC 3 cut(s) 43, 112, 307
BstMWI GCNNNNNNNGC 2 cut(s) 80, 170
BstNI CCWGG 1 cut(s) 261
BstNSI RCATGY 1 cut(s) 259
BstSCI CCNGG 1 cut(s) 259
BstSFI CTRYAG 1 cut(s) 6
BstUI CGCG 1 cut(s) 239
BstV1I GCAGC 1 cut(s) 279
BstV2I GAAGAC 1 cut(s) 258
BstX2I RGATCY 1 cut(s) 112
BstYI RGATCY 1 cut(s) 112
BsuRI GGCC 1 cut(s) 316
BtsCI GGATG 1 cut(s) 94
BtsIMutI CAGTG 3 cut(s) 14, 144, 175
CfoI GCGC 1 cut(s) 85
CspCI CAANNNNNGTGG 2 cut(s) 141, 176
CviAII CATG 1 cut(s) 256
CviJI RGCY 6 cut(s) 74, 184, 202, 269, 292, 316
CviKI_1 RGCY 6 cut(s) 74, 184, 202, 269, 292, 316
DdeI CTNAG 2 cut(s) 178, 273
DpnI GATC 3 cut(s) 45, 114, 309
DpnII GATC 3 cut(s) 43, 112, 307
EcoRI GAATTC 1 cut(s) 343
EcoRII CCWGG 1 cut(s) 259
FaeI CATG 1 cut(s) 259
FaiI YATR 3 cut(s) 8, 249, 257
FalI AAGNNNNNCTT 2 cut(s) 218, 250
FaqI GGGAC 1 cut(s) 151
FatI CATG 1 cut(s) 255
FauI CCCGC 1 cut(s) 210
FbaI TGATCA 1 cut(s) 307
Fnu4HI GCNGC 2 cut(s) 81, 293
FokI GGATG 1 cut(s) 101
Fsp4HI GCNGC 2 cut(s) 81, 293
FspBI CTAG 1 cut(s) 71
GlaI GCGC 1 cut(s) 84
GluI GCNGC 2 cut(s) 81, 293
GsuI CTGGAG 1 cut(s) 60
HaeII RGCGCY 1 cut(s) 86
HaeIII GGCC 1 cut(s) 316
HhaI GCGC 1 cut(s) 85
Hin1II CATG 1 cut(s) 259
Hin6I GCGC 1 cut(s) 83
HinP1I GCGC 1 cut(s) 83
HinfI GANTC 4 cut(s) 36, 329, 352, 374
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 2 cut(s) 43, 349
Hpy188III TCNNGA 5 cut(s) 47, 206, 272, 305, 333
Hpy8I GTNNAC 1 cut(s) 130
HpyAV CCTTC 1 cut(s) 26
HpyF10VI GCNNNNNNNGC 2 cut(s) 80, 170
HpyF3I CTNAG 2 cut(s) 178, 273
Hsp92II CATG 1 cut(s) 259
HspAI GCGC 1 cut(s) 83
Ksp22I TGATCA 1 cut(s) 307
Kzo9I GATC 3 cut(s) 43, 112, 307
LmnI GCTCC 3 cut(s) 79, 274, 307
Lsp1109I GCAGC 1 cut(s) 279
MaeI CTAG 1 cut(s) 71
MalI GATC 3 cut(s) 45, 114, 309
MboI GATC 3 cut(s) 43, 112, 307
MboII GAAGA 3 cut(s) 68, 263, 348
MflI RGATCY 1 cut(s) 112
MluCI AATT 1 cut(s) 343
MlyI GAGTC 1 cut(s) 346
MmeI TCCRAC 2 cut(s) 91, 140
MnlI CCTC 5 cut(s) 35, 43, 46, 108, 364
MroXI GAANNNNTTC 1 cut(s) 343
MspA1I CMGCKG 1 cut(s) 80
MspR9I CCNGG 1 cut(s) 261
MvaI CCWGG 1 cut(s) 261
MvnI CGCG 1 cut(s) 239
MwoI GCNNNNNNNGC 2 cut(s) 80, 170
NdeII GATC 3 cut(s) 43, 112, 307
NlaIII CATG 1 cut(s) 259
NspI RCATGY 1 cut(s) 259
PdmI GAANNNNTTC 1 cut(s) 343
PfeI GAWTC 2 cut(s) 36, 329
PkrI GCNGC 2 cut(s) 82, 294
PleI GAGTC 1 cut(s) 346
PpsI GAGTC 1 cut(s) 346
Psp6I CCWGG 1 cut(s) 259
PspGI CCWGG 1 cut(s) 259
PsuI RGATCY 1 cut(s) 112
SatI GCNGC 2 cut(s) 81, 293
Sau3AI GATC 3 cut(s) 43, 112, 307
SchI GAGTC 1 cut(s) 346
ScrFI CCNGG 1 cut(s) 261
SetI ASST 8 cut(s) 27, 64, 76, 108, 186, 265, 271, 294
SfcI CTRYAG 1 cut(s) 6
Sse9I AATT 1 cut(s) 343
SsiI CCGC 3 cut(s) 80, 217, 239
SspI AATATT 1 cut(s) 360
SspMI CTAG 1 cut(s) 71
StyD4I CCNGG 1 cut(s) 259
TaqI TCGA 1 cut(s) 27
TasI AATT 1 cut(s) 343
TauI GCSGC 1 cut(s) 83
TfiI GAWTC 2 cut(s) 36, 329
TscAI CASTG 3 cut(s) 21, 151, 175
TseI GCWGC 1 cut(s) 292
TspDTI ATGAA 4 cut(s) 45, 204, 264, 356
TspRI CASTG 3 cut(s) 21, 151, 175
XapI RAATTY 1 cut(s) 343
XceI RCATGY 1 cut(s) 259
XmnI GAANNNNTTC 1 cut(s) 343
XspI CTAG 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.