Rmu_ssc0000127.1_g000052

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000127.1
Physical Location & Seq
Reverse (-)
168913 .. 169553
641 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000127.1_g000052.1.cds

Sequence Viewer

Length: 552 bp
atgtggaacagggttactgacaaggctgatcctcatccattccctgtttccgcaaattatgtagatgccaagtactacttggagccaatcactcaattccaggtcagtggtatcgacaataagggctgccccacaggggtgacggcctcagaattggcacaatgggggctcacactcgcaaatgaggaacttgaaaggcctgaccacgctgtgctcaatacttttaaggcctatgatcgagttgcgaccttagagattgttaatgaagagttcaatgaccaagaagaggaagaagaagagattcagctggctctagcagctttagacgatacacctctgaaggtcagggaccctactgaaaaggtcaatctcggaacaaccaacgagcctatggaagtggctattagcgcttatttagagcctaacgagaaacaaaggctcatcgacttattgctagaatacaaggattgctttgcagaaagatacgaagatatctgtcaccagacttggtatgccatcagctgccaacactctccgacaagaggcctgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

183

Amino Acids

20.88

Weight (kDa)

4.38

Isoelectric Point (pI)

35.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 51
AclWI GGATC 1 cut(s) 23
AcuI CTGAAG 1 cut(s) 359
AdeI CACNNNGTG 1 cut(s) 211
AfaI GTAC 1 cut(s) 74
AfeI AGCGCT 1 cut(s) 409
AfiI CCNNNNNNNGG 3 cut(s) 136, 286, 542
AgsI TTSAA 2 cut(s) 194, 274
AjnI CCWGG 1 cut(s) 99
AleI CACNNNNGTG 1 cut(s) 137
AluBI AGCT 3 cut(s) 307, 320, 522
AluI AGCT 3 cut(s) 307, 320, 522
Alw21I GWGCWC 1 cut(s) 216
AlwI GGATC 1 cut(s) 23
Aor51HI AGCGCT 1 cut(s) 409
AoxI GGCC 4 cut(s) 144, 197, 228, 544
ApeKI GCWGC 3 cut(s) 126, 317, 522
Asp700I GAANNNNTTC 1 cut(s) 300
AspLEI GCGC 1 cut(s) 410
AspS9I GGNCC 1 cut(s) 349
AsuHPI GGTGA 2 cut(s) 151, 491
AvaII GGWCC 1 cut(s) 349
BanII GRGCYC 1 cut(s) 171
Bbv12I GWGCWC 1 cut(s) 216
BbvI GCAGC 3 cut(s) 113, 329, 509
BccI CCATC 1 cut(s) 524
BceAI ACGGC 1 cut(s) 159
BciT130I CCWGG 1 cut(s) 101
BfaI CTAG 2 cut(s) 314, 455
BfoI RGCGCY 1 cut(s) 411
BisI GCNGC 3 cut(s) 127, 318, 523
BlsI GCNGC 3 cut(s) 128, 319, 524
BmcAI AGTACT 1 cut(s) 74
Bme1390I CCNGG 1 cut(s) 101
Bme18I GGWCC 1 cut(s) 349
BmgT120I GGNCC 1 cut(s) 349
BmiI GGNNCC 3 cut(s) 84, 350, 351
BmrFI CCNGG 1 cut(s) 101
BmsI GCATC 1 cut(s) 55
BsaBI GATNNNNATC 1 cut(s) 33
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 286, 542
Bse8I GATNNNNATC 1 cut(s) 33
BseBI CCWGG 1 cut(s) 101
BseGI GGATG 1 cut(s) 34
BseJI GATNNNNATC 1 cut(s) 33
BseLI CCNNNNNNNGG 3 cut(s) 136, 286, 542
BseMII CTCAG 1 cut(s) 162
BseXI GCAGC 3 cut(s) 113, 329, 509
BshFI GGCC 4 cut(s) 146, 199, 230, 546
BsiHKAI GWGCWC 1 cut(s) 216
BslFI GGGAC 1 cut(s) 362
BslI CCNNNNNNNGG 3 cut(s) 136, 286, 542
BsmFI GGGAC 1 cut(s) 362
BsnI GGCC 4 cut(s) 146, 199, 230, 546
Bsp1286I GDGCHC 2 cut(s) 171, 216
Bsp143I GATC 2 cut(s) 28, 235
BspACI CCGC 1 cut(s) 51
BspANI GGCC 4 cut(s) 146, 199, 230, 546
BspCNI CTCAG 1 cut(s) 161
BspLI GGNNCC 3 cut(s) 84, 350, 351
BspPI GGATC 1 cut(s) 23
BssMI GATC 2 cut(s) 28, 235
Bst2UI CCWGG 1 cut(s) 101
Bst6I CTCTTC 3 cut(s) 261, 279, 291
BstC8I GCNNGC 1 cut(s) 309
BstDEI CTNAG 2 cut(s) 148, 250
BstF5I GGATG 1 cut(s) 34
BstH2I RGCGCY 1 cut(s) 411
BstHHI GCGC 1 cut(s) 410
BstKTI GATC 2 cut(s) 31, 238
BstMBI GATC 2 cut(s) 28, 235
BstMWI GCNNNNNNNGC 2 cut(s) 317, 407
BstNI CCWGG 1 cut(s) 101
BstSCI CCNGG 1 cut(s) 99
BstV1I GCAGC 3 cut(s) 113, 329, 509
BstXI CCANNNNNNTGG 1 cut(s) 107
BsuRI GGCC 4 cut(s) 146, 199, 230, 546
BtsCI GGATG 1 cut(s) 34
BtsIMutI CAGTG 1 cut(s) 112
Cac8I GCNNGC 1 cut(s) 309
CfoI GCGC 1 cut(s) 410
Cfr13I GGNCC 1 cut(s) 349
Csp6I GTAC 1 cut(s) 73
CviQI GTAC 1 cut(s) 73
DdeI CTNAG 2 cut(s) 148, 250
DpnI GATC 2 cut(s) 30, 237
DpnII GATC 2 cut(s) 28, 235
DraIII CACNNNGTG 1 cut(s) 211
Eam1104I CTCTTC 3 cut(s) 261, 279, 291
EarI CTCTTC 3 cut(s) 261, 279, 291
Eco147I AGGCCT 3 cut(s) 199, 230, 546
Eco24I GRGCYC 1 cut(s) 171
Eco32I GATATC 1 cut(s) 493
Eco47I GGWCC 1 cut(s) 349
Eco47III AGCGCT 1 cut(s) 409
Eco57I CTGAAG 1 cut(s) 359
EcoO109I RGGNCCY 1 cut(s) 349
EcoRII CCWGG 1 cut(s) 99
EcoRV GATATC 1 cut(s) 493
EcoT38I GRGCYC 1 cut(s) 171
FaiI YATR 4 cut(s) 60, 234, 392, 513
FalI AAGNNNNNCTT 4 cut(s) 62, 94, 455, 487
FaqI GGGAC 1 cut(s) 362
Fnu4HI GCNGC 3 cut(s) 127, 318, 523
FokI GGATG 1 cut(s) 21
FriOI GRGCYC 1 cut(s) 171
Fsp4HI GCNGC 3 cut(s) 127, 318, 523
FspBI CTAG 2 cut(s) 314, 455
GlaI GCGC 1 cut(s) 409
GluI GCNGC 3 cut(s) 127, 318, 523
HaeII RGCGCY 1 cut(s) 411
HaeIII GGCC 4 cut(s) 146, 199, 230, 546
HhaI GCGC 1 cut(s) 410
Hin6I GCGC 1 cut(s) 408
HinP1I GCGC 1 cut(s) 408
HinfI GANTC 1 cut(s) 301
HphI GGTGA 2 cut(s) 151, 491
Hpy188I TCNGA 4 cut(s) 151, 339, 374, 537
HpyAV CCTTC 1 cut(s) 334
HpyCH4V TGCA 1 cut(s) 476
HpyF10VI GCNNNNNNNGC 2 cut(s) 317, 407
HpyF3I CTNAG 2 cut(s) 148, 250
HspAI GCGC 1 cut(s) 408
KflI GGGWCCC 1 cut(s) 349
Kzo9I GATC 2 cut(s) 28, 235
LmnI GCTCC 1 cut(s) 82
LpnPI CCDG 8 cut(s) 57, 86, 113, 120, 213, 293, 331, 515
Lsp1109I GCAGC 3 cut(s) 113, 329, 509
LweI GCATC 1 cut(s) 55
MaeI CTAG 2 cut(s) 314, 455
MaeIII GTNAC 3 cut(s) 13, 139, 497
MalI GATC 2 cut(s) 30, 237
MboI GATC 2 cut(s) 28, 235
MboII GAAGA 6 cut(s) 278, 296, 302, 305, 308, 500
MhlI GDGCHC 2 cut(s) 171, 216
MluCI AATT 3 cut(s) 55, 95, 152
MnlI CCTC 6 cut(s) 42, 157, 178, 280, 345, 536
MroXI GAANNNNTTC 1 cut(s) 300
MseI TTAA 2 cut(s) 225, 261
MslI CAYNNNNRTG 1 cut(s) 137
MspA1I CMGCKG 2 cut(s) 307, 522
MspR9I CCNGG 1 cut(s) 101
MvaI CCWGG 1 cut(s) 101
MwoI GCNNNNNNNGC 2 cut(s) 317, 407
NdeII GATC 2 cut(s) 28, 235
NlaIV GGNNCC 3 cut(s) 84, 350, 351
NmuCI GTSAC 2 cut(s) 139, 497
OliI CACNNNNGTG 1 cut(s) 137
PceI AGGCCT 3 cut(s) 199, 230, 546
PdmI GAANNNNTTC 1 cut(s) 300
PfeI GAWTC 1 cut(s) 301
PkrI GCNGC 3 cut(s) 128, 319, 524
PpuMI RGGWCCY 1 cut(s) 349
Psp5II RGGWCCY 1 cut(s) 349
Psp6I CCWGG 1 cut(s) 99
PspGI CCWGG 1 cut(s) 99
PspN4I GGNNCC 3 cut(s) 84, 350, 351
PspPI GGNCC 1 cut(s) 349
PspPPI RGGWCCY 1 cut(s) 349
PvuII CAGCTG 2 cut(s) 307, 522
RsaI GTAC 1 cut(s) 74
RsaNI GTAC 1 cut(s) 73
RseI CAYNNNNRTG 1 cut(s) 137
SaqAI TTAA 2 cut(s) 225, 261
SatI GCNGC 3 cut(s) 127, 318, 523
Sau3AI GATC 2 cut(s) 28, 235
Sau96I GGNCC 1 cut(s) 349
ScaI AGTACT 1 cut(s) 74
ScrFI CCNGG 1 cut(s) 101
SduI GDGCHC 2 cut(s) 171, 216
SetI ASST 8 cut(s) 105, 251, 309, 322, 337, 345, 366, 524
SfaNI GCATC 1 cut(s) 55
SinI GGWCC 1 cut(s) 349
SmiMI CAYNNNNRTG 1 cut(s) 137
Sse9I AATT 3 cut(s) 55, 95, 152
SseBI AGGCCT 3 cut(s) 199, 230, 546
SsiI CCGC 1 cut(s) 51
SspMI CTAG 2 cut(s) 314, 455
StuI AGGCCT 3 cut(s) 199, 230, 546
StyD4I CCNGG 1 cut(s) 99
TaqI TCGA 3 cut(s) 114, 238, 444
TasI AATT 3 cut(s) 55, 95, 152
TatI WGTACW 1 cut(s) 72
TfiI GAWTC 1 cut(s) 301
Tru1I TTAA 2 cut(s) 225, 261
Tru9I TTAA 2 cut(s) 225, 261
TscAI CASTG 1 cut(s) 112
TseFI GTSAC 2 cut(s) 139, 497
TseI GCWGC 3 cut(s) 126, 317, 522
Tsp45I GTSAC 2 cut(s) 139, 497
TspDTI ATGAA 1 cut(s) 279
TspRI CASTG 1 cut(s) 112
VpaK11BI GGWCC 1 cut(s) 349
XcmI CCANNNNNNNNNTGG 2 cut(s) 76, 388
XmnI GAANNNNTTC 1 cut(s) 300
XspI CTAG 2 cut(s) 314, 455
ZrmI AGTACT 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.