Rroxscaffold_3G00255440

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000176
Physical Location & Seq
Reverse (-)
49709814 .. 49719019
9206 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00255440.1

Sequence Viewer

Length: 1359 bp
ATGGATTACGACCTTCCGCAGGAAGGGATAGAGGCCTTCCATTCCTTGTACAAGAGGCTATCCTCATACTTGGTGGAAAAAGAGGCCTATGATCGAGTCGCGACCTTAGAAATTGTTAATGAAGAGTTCTCTCGACCAAGAAGAGGGGAAGAAGAGATTCGTATTGCTCCAACGGCATTGGATGACACACCTCCGAAGTGCCTCGTTCGCAAGAAGAATGGCAAGATGAGGGTCCGCATGGATTACGTAGACCTTAATTTGGCCACACCTAAAGACGTCTACCCCATGCCGGCTGCGGACATGTTGGTAGACGCAGCAGAGGCACGAACCGCCGTCTTTCATGGACGGCACAAGCAGATATCACCTTTTGTTTGTGCTGGGGTTAGAGATATAGTAGCAAACATTATGAAGAGGCAAGCTAAATCTGCTGCTACTAGTTCCGGTGCTAATCCGAAATCAACTTCTTCATCTCAGTTTTCGTTCGTTTTGCAGATCAACACTAGTGTTGGTGAATCTACAACACCAATAACTCCCCATGAAGGAACTTCTACTGCAACTGCGGAAGTTCAAGGAACTCAAGCAACCCAGCTTGAAGATGATGGAAGAGACGAACTGCGACGACGCGGGGAAGATGGCATAGACTTCATATGTGTTTATGGCCGTGAAGCGAAACAACTCATGCGTGCGCTCATTCTCGGCATTTGCGTCTTGCCATTGGAAGTCAATGTCCAATCATTACGAGTTCAAGAGCAACATCATCTCATTGGAGAAGATTACGTTCAAAGCTATGTGGCAGAACATGAAGACCTTAGTGAAAAGCGCTTGGAGGCTTTAGATAGTTTGGTCATGGAAAAGCAACGAGTCGCTCGTGCCTACGACAAGAGGACGCGGGGAAGGAGTTACAGCGAAGGAGAGAGCCGAGGCCGAGCTCAAGGGAAATGCGAGAGCTATCGTGGTAGCCGCCCCATCCACCGGAGTGATAGTCGTAGCGGCCACCTCCTTCGAAGTAGTCGAGTTGCAGGAGCCGAGGCCAAGCTCGCGGGAAATGCGAGAGCTATCGTGGTAGCCGCCCCATCCACCGGAGCGATAGCCGTAGCGGCCACCTCCTTCGGAAGTAGTCGAGCCATAGGAGTTGAGGCTGAGCTCAAGGGAAATGCGAGAGCCATCGTTGTTGCCGCCCATCCACCGAATGGTTGCCGTAGCCGCCACCTCCCTCTAAGTAGTCTTCATGTCCTCACCATGCATGGGAAACAGAAGAAGGGTTTCAATCTCCCTGTTCATAGATCCATAACCACCATAGTTCCCCATCCGCCGCTTAAAAGCAGTCATCATACCACTAAAGAAGCGTATGATGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

452

Amino Acids

49.65

Weight (kDa)

9.07

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 279
AccB7I CCANNNNNTGG 1 cut(s) 1190
AccI GTMKAC 3 cut(s) 249, 279, 309
AccII CGCG 4 cut(s) 101, 624, 889, 1040
AclWI GGATC 1 cut(s) 1278
AcoI YGGCCR 4 cut(s) 261, 658, 991, 1098
AcyI GRCGYC 1 cut(s) 276
AfaI GTAC 1 cut(s) 50
AfeI AGCGCT 1 cut(s) 821
AflIII ACRYGT 1 cut(s) 300
AgsI TTSAA 5 cut(s) 569, 593, 746, 782, 1267
AhlI ACTAGT 2 cut(s) 434, 500
AleI CACNNNNGTG 1 cut(s) 975
AluBI AGCT 8 cut(s) 419, 589, 786, 929, 948, 1036, 1055, 1144
AluI AGCT 8 cut(s) 419, 589, 786, 929, 948, 1036, 1055, 1144
Alw21I GWGCWC 2 cut(s) 931, 1146
Alw26I GTCTC 1 cut(s) 600
AlwI GGATC 1 cut(s) 1278
Aor51HI AGCGCT 1 cut(s) 821
AoxI GGCC 8 cut(s) 33, 84, 261, 658, 922, 991, 1029, 1098
ApeKI GCWGC 3 cut(s) 293, 314, 428
Asp700I GAANNNNTTC 2 cut(s) 156, 1262
AspLEI GCGC 2 cut(s) 688, 822
AspS9I GGNCC 1 cut(s) 232
AsuHPI GGTGA 3 cut(s) 354, 521, 1228
AsuII TTCGAA 1 cut(s) 1003
AvaII GGWCC 1 cut(s) 232
BalI TGGCCA 1 cut(s) 263
BanII GRGCYC 2 cut(s) 931, 1146
BauI CACGAG 1 cut(s) 867
BbsI GAAGAC 2 cut(s) 810, 1217
Bbv12I GWGCWC 2 cut(s) 931, 1146
BbvI GCAGC 3 cut(s) 280, 326, 415
BccI CCATC 7 cut(s) 593, 626, 974, 1081, 1172, 1188, 1314
BceAI ACGGC 6 cut(s) 189, 317, 362, 645, 1076, 1182
BcoDI GTCTC 1 cut(s) 600
BcuI ACTAGT 2 cut(s) 434, 500
BfaI CTAG 2 cut(s) 435, 501
BfoI RGCGCY 1 cut(s) 823
BglI GCCNNNNNGGC 1 cut(s) 1097
BlpI GCTNAGC 1 cut(s) 1140
Bme18I GGWCC 1 cut(s) 232
BmgT120I GGNCC 1 cut(s) 232
BmiI GGNNCC 2 cut(s) 233, 1024
BmsI GCATC 1 cut(s) 1342
BpiI GAAGAC 2 cut(s) 810, 1217
Bpu1102I GCTNAGC 1 cut(s) 1140
Bpu14I TTCGAA 1 cut(s) 1003
BpuEI CTTGAG 3 cut(s) 561, 915, 1130
BsaAI YACGTR 1 cut(s) 247
BsaHI GRCGYC 1 cut(s) 276
BsaJI CCNNGG 2 cut(s) 919, 1026
BsaWI WCCGGW 3 cut(s) 440, 972, 1079
BsaXI ACNNNNNCTCC 2 cut(s) 967, 997
Bse118I RCCGGY 1 cut(s) 289
BseDI CCNNGG 2 cut(s) 919, 1026
BseGI GGATG 5 cut(s) 187, 966, 1073, 1180, 1306
BseMII CTCAG 2 cut(s) 485, 1131
BseXI GCAGC 3 cut(s) 280, 326, 415
BseYI CCCAGC 2 cut(s) 377, 585
Bsh1236I CGCG 4 cut(s) 101, 624, 889, 1040
BshFI GGCC 8 cut(s) 35, 86, 263, 660, 924, 993, 1031, 1100
BsiHKAI GWGCWC 2 cut(s) 931, 1146
BsiSI CCGG 4 cut(s) 290, 441, 973, 1080
BsmAI GTCTC 1 cut(s) 600
BsmBI CGTCTC 1 cut(s) 600
BsnI GGCC 8 cut(s) 35, 86, 263, 660, 924, 993, 1031, 1100
Bsp119I TTCGAA 1 cut(s) 1003
Bsp1286I GDGCHC 2 cut(s) 931, 1146
Bsp1407I TGTACA 1 cut(s) 48
Bsp143I GATC 3 cut(s) 91, 492, 1283
Bsp1720I GCTNAGC 1 cut(s) 1140
Bsp68I TCGCGA 1 cut(s) 101
BspANI GGCC 8 cut(s) 35, 86, 263, 660, 924, 993, 1031, 1100
BspCNI CTCAG 2 cut(s) 484, 1132
BspFNI CGCG 4 cut(s) 101, 624, 889, 1040
BspLI GGNNCC 2 cut(s) 233, 1024
BspPI GGATC 1 cut(s) 1278
BspT104I TTCGAA 1 cut(s) 1003
BsrFI RCCGGY 1 cut(s) 289
BsrGI TGTACA 1 cut(s) 48
BssAI RCCGGY 1 cut(s) 289
BssECI CCNNGG 2 cut(s) 919, 1026
BssMI GATC 3 cut(s) 91, 492, 1283
BssNI GRCGYC 1 cut(s) 276
BssSI CACGAG 1 cut(s) 867
Bst2BI CACGAG 1 cut(s) 867
Bst6I CTCTTC 5 cut(s) 117, 136, 147, 404, 598
BstACI GRCGYC 1 cut(s) 276
BstAUI TGTACA 1 cut(s) 48
BstBAI YACGTR 1 cut(s) 247
BstBI TTCGAA 1 cut(s) 1003
BstC8I GCNNGC 4 cut(s) 291, 417, 684, 1038
BstDEI CTNAG 5 cut(s) 106, 471, 809, 1140, 1217
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 5 cut(s) 187, 966, 1073, 1180, 1306
BstFNI CGCG 4 cut(s) 101, 624, 889, 1040
BstH2I RGCGCY 1 cut(s) 823
BstHHI GCGC 2 cut(s) 688, 822
BstKTI GATC 3 cut(s) 94, 495, 1286
BstMAI GTCTC 1 cut(s) 600
BstMBI GATC 3 cut(s) 91, 492, 1283
BstNSI RCATGY 1 cut(s) 304
BstSNI TACGTA 1 cut(s) 247
BstUI CGCG 4 cut(s) 101, 624, 889, 1040
BstV1I GCAGC 3 cut(s) 280, 326, 415
BstV2I GAAGAC 2 cut(s) 810, 1217
BstX2I RGATCY 1 cut(s) 1283
BstYI RGATCY 1 cut(s) 1283
BsuRI GGCC 8 cut(s) 35, 86, 263, 660, 924, 993, 1031, 1100
BtsCI GGATG 5 cut(s) 187, 966, 1073, 1180, 1306
BtuMI TCGCGA 1 cut(s) 101
Cac8I GCNNGC 4 cut(s) 291, 417, 684, 1038
CfoI GCGC 2 cut(s) 688, 822
Cfr10I RCCGGY 1 cut(s) 289
Cfr13I GGNCC 1 cut(s) 232
CseI GACGC 4 cut(s) 320, 630, 694, 895
Csp6I GTAC 1 cut(s) 49
CviQI GTAC 1 cut(s) 49
DdeI CTNAG 5 cut(s) 106, 471, 809, 1140, 1217
DpnI GATC 3 cut(s) 93, 494, 1285
DpnII GATC 3 cut(s) 91, 492, 1283
EaeI YGGCCR 4 cut(s) 261, 658, 991, 1098
Eam1104I CTCTTC 5 cut(s) 117, 136, 147, 404, 598
EarI CTCTTC 5 cut(s) 117, 136, 147, 404, 598
EciI GGCGGA 1 cut(s) 1299
Ecl136II GAGCTC 2 cut(s) 929, 1144
Eco105I TACGTA 1 cut(s) 247
Eco147I AGGCCT 2 cut(s) 35, 86
Eco24I GRGCYC 2 cut(s) 931, 1146
Eco32I GATATC 1 cut(s) 360
Eco47I GGWCC 1 cut(s) 232
Eco47III AGCGCT 1 cut(s) 821
Eco53kI GAGCTC 2 cut(s) 929, 1144
EcoICRI GAGCTC 2 cut(s) 929, 1144
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoRV GATATC 1 cut(s) 360
EcoT22I ATGCAT 1 cut(s) 1245
EcoT38I GRGCYC 2 cut(s) 931, 1146
Esp3I CGTCTC 1 cut(s) 600
FauI CCCGC 3 cut(s) 617, 882, 1033
FauNDI CATATG 1 cut(s) 647
FblI GTMKAC 3 cut(s) 249, 279, 309
FokI GGATG 5 cut(s) 194, 953, 1060, 1167, 1293
FriOI GRGCYC 2 cut(s) 931, 1146
FspBI CTAG 2 cut(s) 435, 501
GlaI GCGC 2 cut(s) 687, 821
GsaI CCCAGC 2 cut(s) 381, 589
HaeII RGCGCY 1 cut(s) 823
HaeIII GGCC 8 cut(s) 35, 86, 263, 660, 924, 993, 1031, 1100
HapII CCGG 4 cut(s) 290, 441, 973, 1080
HgaI GACGC 4 cut(s) 320, 630, 694, 895
HhaI GCGC 2 cut(s) 688, 822
Hin1I GRCGYC 1 cut(s) 276
Hin6I GCGC 2 cut(s) 686, 820
HinP1I GCGC 2 cut(s) 686, 820
HinfI GANTC 4 cut(s) 96, 157, 512, 861
HpaII CCGG 4 cut(s) 290, 441, 973, 1080
HphI GGTGA 3 cut(s) 354, 521, 1228
Hpy166II GTNNAC 3 cut(s) 250, 280, 310
Hpy188I TCNGA 3 cut(s) 195, 453, 1112
Hpy188III TCNNGA 3 cut(s) 100, 132, 746
Hpy8I GTNNAC 3 cut(s) 250, 280, 310
Hpy99I CGWCG 2 cut(s) 621, 624
HpyAV CCTTC 9 cut(s) 17, 23, 46, 533, 888, 902, 1010, 1117, 1252
HpyCH4IV ACGT 3 cut(s) 246, 276, 777
HpyCH4V TGCA 4 cut(s) 490, 554, 1019, 1243
HpyF3I CTNAG 5 cut(s) 106, 471, 809, 1140, 1217
HpySE526I ACGT 3 cut(s) 246, 276, 777
Hsp92I GRCGYC 1 cut(s) 276
HspAI GCGC 2 cut(s) 686, 820
KroI GCCGGC 1 cut(s) 289
KroNI GCCGGC 1 cut(s) 291
Kzo9I GATC 3 cut(s) 91, 492, 1283
LmnI GCTCC 3 cut(s) 172, 1022, 1082
LpnPI CCDG 9 cut(s) 5, 303, 363, 454, 599, 986, 1005, 1093, 1287
Lsp1109I GCAGC 3 cut(s) 280, 326, 415
LweI GCATC 1 cut(s) 1342
MaeI CTAG 2 cut(s) 435, 501
MaeII ACGT 3 cut(s) 246, 276, 777
MaeIII GTNAC 1 cut(s) 899
MalI GATC 3 cut(s) 93, 494, 1285
MboI GATC 3 cut(s) 91, 492, 1283
MflI RGATCY 1 cut(s) 1283
MhlI GDGCHC 2 cut(s) 931, 1146
MlsI TGGCCA 1 cut(s) 263
MluCI AATT 2 cut(s) 111, 256
MluNI TGGCCA 1 cut(s) 263
MlyI GAGTC 2 cut(s) 105, 870
MmeI TCCRAC 1 cut(s) 194
Mox20I TGGCCA 1 cut(s) 263
Mph1103I ATGCAT 1 cut(s) 1245
MroNI GCCGGC 1 cut(s) 289
MroXI GAANNNNTTC 2 cut(s) 156, 1262
MscI TGGCCA 1 cut(s) 263
MseI TTAA 3 cut(s) 117, 255, 1317
MslI CAYNNNNRTG 1 cut(s) 975
Msp20I TGGCCA 1 cut(s) 263
MspI CCGG 4 cut(s) 290, 441, 973, 1080
MvnI CGCG 4 cut(s) 101, 624, 889, 1040
NaeI GCCGGC 1 cut(s) 291
NdeI CATATG 1 cut(s) 647
NdeII GATC 3 cut(s) 91, 492, 1283
NgoMIV GCCGGC 1 cut(s) 289
NlaIV GGNNCC 2 cut(s) 233, 1024
NmeAIII GCCGAG 4 cut(s) 675, 944, 950, 1051
NruI TCGCGA 1 cut(s) 101
NsiI ATGCAT 1 cut(s) 1245
NspI RCATGY 1 cut(s) 304
NspV TTCGAA 1 cut(s) 1003
OliI CACNNNNGTG 1 cut(s) 975
PceI AGGCCT 2 cut(s) 35, 86
PciI ACATGT 1 cut(s) 300
PcsI WCGNNNNNNNCGW 3 cut(s) 702, 865, 1009
PdiI GCCGGC 1 cut(s) 291
PdmI GAANNNNTTC 2 cut(s) 156, 1262
PfeI GAWTC 2 cut(s) 157, 512
PflMI CCANNNNNTGG 1 cut(s) 1190
PleI GAGTC 2 cut(s) 104, 869
PpsI GAGTC 2 cut(s) 104, 869
Ppu21I YACGTR 1 cut(s) 247
PscI ACATGT 1 cut(s) 300
Psp124BI GAGCTC 2 cut(s) 931, 1146
PspFI CCCAGC 2 cut(s) 377, 585
PspN4I GGNNCC 2 cut(s) 233, 1024
PspPI GGNCC 1 cut(s) 232
PsuI RGATCY 1 cut(s) 1283
RruI TCGCGA 1 cut(s) 101
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
RseI CAYNNNNRTG 1 cut(s) 975
SacI GAGCTC 2 cut(s) 931, 1146
SaqAI TTAA 3 cut(s) 117, 255, 1317
Sau3AI GATC 3 cut(s) 91, 492, 1283
Sau96I GGNCC 1 cut(s) 232
SchI GAGTC 2 cut(s) 105, 870
SduI GDGCHC 2 cut(s) 931, 1146
SfaNI GCATC 1 cut(s) 1342
SfuI TTCGAA 1 cut(s) 1003
SinI GGWCC 1 cut(s) 232
SmiMI CAYNNNNRTG 1 cut(s) 975
SmlI CTYRAG 3 cut(s) 576, 930, 1145
SmoI CTYRAG 3 cut(s) 576, 930, 1145
SnaBI TACGTA 1 cut(s) 247
SpeI ACTAGT 2 cut(s) 434, 500
Sse9I AATT 2 cut(s) 111, 256
SseBI AGGCCT 2 cut(s) 35, 86
SspMI CTAG 2 cut(s) 435, 501
SstI GAGCTC 2 cut(s) 931, 1146
StuI AGGCCT 2 cut(s) 35, 86
TaiI ACGT 3 cut(s) 249, 279, 780
TaqI TCGA 5 cut(s) 94, 133, 1003, 1012, 1120
TasI AATT 2 cut(s) 111, 256
TatI WGTACW 1 cut(s) 48
TauI GCSGC 7 cut(s) 963, 993, 1070, 1100, 1178, 1206, 1315
TfiI GAWTC 2 cut(s) 157, 512
Tru1I TTAA 3 cut(s) 117, 255, 1317
Tru9I TTAA 3 cut(s) 117, 255, 1317
TseI GCWGC 3 cut(s) 293, 314, 428
TspDTI ATGAA 9 cut(s) 135, 329, 422, 456, 552, 634, 816, 1217, 1268
Van91I CCANNNNNTGG 1 cut(s) 1190
VpaK11BI GGWCC 1 cut(s) 232
XagI CCTNNNNNAGG 1 cut(s) 17
XceI RCATGY 1 cut(s) 304
XcmI CCANNNNNNNNNTGG 1 cut(s) 1187
XmiI GTMKAC 3 cut(s) 249, 279, 309
XmnI GAANNNNTTC 2 cut(s) 156, 1262
XspI CTAG 2 cut(s) 435, 501
ZraI GACGTC 1 cut(s) 277
Zsp2I ATGCAT 1 cut(s) 1245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.