Rmu_sc0006561.1_g000011

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006561.1
Physical Location & Seq
Forward (+)
50827 .. 51129
303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006561.1_g000011.1.cds

Sequence Viewer

Length: 303 bp
atggattacgaccttccagaggaagggatagaggccctccactctttgtacgagagattatcctcgtatatggtggaaaaagaggcatatgatcgagttgcgaccttggaaatagttaacgaggacctctctaaccatgaagaggaagaggaagacattcagctcgccccaacggcattggatgacacacctcttaaggtcaaggaccctactgagaaagttagtcttggaacaaatgatgtgcccatggaagtggctatcatcgctgacttagagcctagtgagaaaaggagaggctcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

100

Amino Acids

11.29

Weight (kDa)

4.14

Isoelectric Point (pI)

59.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 50
AfiI CCNNNNNNNGG 3 cut(s) 19, 23, 142
AflII CTTAAG 1 cut(s) 194
AluBI AGCT 1 cut(s) 163
AluI AGCT 1 cut(s) 163
AoxI GGCC 1 cut(s) 33
Asp700I GAANNNNTTC 1 cut(s) 156
AspS9I GGNCC 3 cut(s) 34, 124, 205
AvaII GGWCC 2 cut(s) 124, 205
BaeGI GKGCMC 1 cut(s) 246
BbsI GAAGAC 1 cut(s) 159
BceAI ACGGC 1 cut(s) 189
BfaI CTAG 1 cut(s) 279
BfrI CTTAAG 1 cut(s) 194
BglI GCCNNNNNGGC 1 cut(s) 173
Bme18I GGWCC 2 cut(s) 124, 205
BmgT120I GGNCC 3 cut(s) 34, 124, 205
BmiI GGNNCC 1 cut(s) 207
BpiI GAAGAC 1 cut(s) 159
BplI GAGNNNNNCTC 2 cut(s) 113, 145
BsaJI CCNNGG 2 cut(s) 105, 246
Bsc4I CCNNNNNNNGG 3 cut(s) 19, 23, 142
BseDI CCNNGG 2 cut(s) 105, 246
BseGI GGATG 1 cut(s) 187
BseLI CCNNNNNNNGG 3 cut(s) 19, 23, 142
BseMII CTCAG 1 cut(s) 204
BseSI GKGCMC 1 cut(s) 246
BshFI GGCC 1 cut(s) 35
BslI CCNNNNNNNGG 3 cut(s) 19, 23, 142
BsnI GGCC 1 cut(s) 35
Bsp1286I GDGCHC 1 cut(s) 246
Bsp143I GATC 1 cut(s) 91
Bsp19I CCATGG 1 cut(s) 246
BspANI GGCC 1 cut(s) 35
BspCNI CTCAG 1 cut(s) 205
BspLI GGNNCC 1 cut(s) 207
BspTI CTTAAG 1 cut(s) 194
BssECI CCNNGG 2 cut(s) 105, 246
BssMI GATC 1 cut(s) 91
BssT1I CCWWGG 2 cut(s) 105, 246
Bst6I CTCTTC 2 cut(s) 135, 141
BstAFI CTTAAG 1 cut(s) 194
BstC8I GCNNGC 1 cut(s) 165
BstDEI CTNAG 2 cut(s) 213, 271
BstDSI CCRYGG 1 cut(s) 246
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 1 cut(s) 187
BstKTI GATC 1 cut(s) 94
BstMBI GATC 1 cut(s) 91
BstMWI GCNNNNNNNGC 2 cut(s) 173, 263
BstSLI GKGCMC 1 cut(s) 246
BstV2I GAAGAC 1 cut(s) 159
BstXI CCANNNNNNTGG 1 cut(s) 253
BsuRI GGCC 1 cut(s) 35
BtgI CCRYGG 1 cut(s) 246
BtgZI GCGATG 1 cut(s) 247
BtsCI GGATG 1 cut(s) 187
Cac8I GCNNGC 1 cut(s) 165
Cfr13I GGNCC 3 cut(s) 34, 124, 205
Csp6I GTAC 1 cut(s) 49
CviAII CATG 2 cut(s) 137, 247
CviJI RGCY 5 cut(s) 35, 163, 257, 277, 297
CviKI_1 RGCY 5 cut(s) 35, 163, 257, 277, 297
CviQI GTAC 1 cut(s) 49
DdeI CTNAG 2 cut(s) 213, 271
DpnI GATC 1 cut(s) 93
DpnII GATC 1 cut(s) 91
Eam1104I CTCTTC 2 cut(s) 135, 141
EarI CTCTTC 2 cut(s) 135, 141
Eco130I CCWWGG 2 cut(s) 105, 246
Eco47I GGWCC 2 cut(s) 124, 205
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoO109I RGGNCCY 3 cut(s) 34, 124, 205
EcoT14I CCWWGG 2 cut(s) 105, 246
ErhI CCWWGG 2 cut(s) 105, 246
FaeI CATG 2 cut(s) 140, 250
FaiI YATR 7 cut(s) 69, 71, 88, 90, 138, 248, 301
FalI AAGNNNNNCTT 2 cut(s) 210, 242
FatI CATG 2 cut(s) 136, 246
FauNDI CATATG 1 cut(s) 88
FokI GGATG 1 cut(s) 194
FspBI CTAG 1 cut(s) 279
HaeIII GGCC 1 cut(s) 35
Hin1II CATG 2 cut(s) 140, 250
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HpaI GTTAAC 1 cut(s) 118
Hpy166II GTNNAC 1 cut(s) 118
Hpy188III TCNNGA 1 cut(s) 17
Hpy8I GTNNAC 1 cut(s) 118
HpyAV CCTTC 2 cut(s) 17, 23
HpyF10VI GCNNNNNNNGC 2 cut(s) 173, 263
HpyF3I CTNAG 2 cut(s) 213, 271
Hsp92II CATG 2 cut(s) 140, 250
KspAI GTTAAC 1 cut(s) 118
Kzo9I GATC 1 cut(s) 91
LpnPI CCDG 1 cut(s) 30
MaeI CTAG 1 cut(s) 279
MalI GATC 1 cut(s) 93
MboI GATC 1 cut(s) 91
MboII GAAGA 3 cut(s) 152, 158, 164
MhlI GDGCHC 1 cut(s) 246
MroXI GAANNNNTTC 1 cut(s) 156
MseI TTAA 2 cut(s) 117, 195
MslI CAYNNNNRTG 1 cut(s) 251
MspCI CTTAAG 1 cut(s) 194
MwoI GCNNNNNNNGC 2 cut(s) 173, 263
NcoI CCATGG 1 cut(s) 246
NdeI CATATG 1 cut(s) 88
NdeII GATC 1 cut(s) 91
NlaIII CATG 2 cut(s) 140, 250
NlaIV GGNNCC 1 cut(s) 207
PdmI GAANNNNTTC 1 cut(s) 156
PpuMI RGGWCCY 2 cut(s) 124, 205
Psp5II RGGWCCY 2 cut(s) 124, 205
PspN4I GGNNCC 1 cut(s) 207
PspPI GGNCC 3 cut(s) 34, 124, 205
PspPPI RGGWCCY 2 cut(s) 124, 205
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
RseI CAYNNNNRTG 1 cut(s) 251
SaqAI TTAA 2 cut(s) 117, 195
Sau3AI GATC 1 cut(s) 91
Sau96I GGNCC 3 cut(s) 34, 124, 205
SduI GDGCHC 1 cut(s) 246
SetI ASST 6 cut(s) 15, 107, 129, 165, 193, 201
SinI GGWCC 2 cut(s) 124, 205
SmiMI CAYNNNNRTG 1 cut(s) 251
SmlI CTYRAG 1 cut(s) 194
SmoI CTYRAG 1 cut(s) 194
SspMI CTAG 1 cut(s) 279
StyI CCWWGG 2 cut(s) 105, 246
TaqI TCGA 1 cut(s) 94
Tru1I TTAA 2 cut(s) 117, 195
Tru9I TTAA 2 cut(s) 117, 195
TspDTI ATGAA 1 cut(s) 153
Vha464I CTTAAG 1 cut(s) 194
VpaK11BI GGWCC 2 cut(s) 124, 205
XagI CCTNNNNNAGG 1 cut(s) 17
XmnI GAANNNNTTC 1 cut(s) 156
XspI CTAG 1 cut(s) 279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.