Rmu_sc0026069.1_g000002

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0026069.1
Physical Location & Seq
Reverse (-)
887 .. 1342
456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0026069.1_g000002.1.cds

Sequence Viewer

Length: 456 bp
ctgatcgtgtggaatagggtgactgataaggcggaggtgattcaagcagatcctcgcccttttcctgtttatgcaaattatgtagatgccaggtactacttggagccaacggtactggatgacacccctccaaaggttagggaccccactgagaaaatcaatctgggaacgatcgaggagccaatggaagtggctattagttcgtacttagagcctagagtgaagcagaggctcattgaattgttgaaagaatataaggattgttttgaggaaaagtacgaagacatgccaggcctatcccctgacttggtttgccaccagctgccaacgttaacggacaagaggcctgtgaagcaagagccacgaaggatgaactcagagacccaagtcttggtcaaagaggaggtagaaaatttgcacaagtttggcatctttcgggtggccaagtacaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

151

Amino Acids

17.72

Weight (kDa)

5.19

Isoelectric Point (pI)

52.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 391
AciI CCGC 1 cut(s) 32
AclI AACGTT 1 cut(s) 329
AclWI GGATC 1 cut(s) 44
AcoI YGGCCR 1 cut(s) 441
AcsI RAATTY 1 cut(s) 412
AfaI GTAC 5 cut(s) 95, 114, 206, 278, 449
AfiI CCNNNNNNNGG 3 cut(s) 133, 307, 391
AgsI TTSAA 3 cut(s) 44, 239, 247
AjnI CCWGG 2 cut(s) 89, 289
AluBI AGCT 1 cut(s) 322
AluI AGCT 1 cut(s) 322
Alw26I GTCTC 1 cut(s) 374
AlwI GGATC 1 cut(s) 44
AoxI GGCC 3 cut(s) 292, 344, 441
ApeKI GCWGC 1 cut(s) 322
ApoI RAATTY 1 cut(s) 412
AspS9I GGNCC 1 cut(s) 142
AsuHPI GGTGA 2 cut(s) 31, 49
AvaII GGWCC 1 cut(s) 142
BalI TGGCCA 1 cut(s) 443
BbsI GAAGAC 1 cut(s) 288
BbvI GCAGC 1 cut(s) 309
BciT130I CCWGG 2 cut(s) 91, 291
BcoDI GTCTC 1 cut(s) 374
BfaI CTAG 1 cut(s) 216
BisI GCNGC 1 cut(s) 323
BlsI GCNGC 1 cut(s) 324
Bme1390I CCNGG 2 cut(s) 91, 291
Bme18I GGWCC 1 cut(s) 142
BmgT120I GGNCC 1 cut(s) 142
BmiI GGNNCC 4 cut(s) 105, 143, 144, 180
BmrFI CCNGG 2 cut(s) 91, 291
BmsI GCATC 2 cut(s) 76, 438
BoxI GACNNNNGTC 1 cut(s) 386
BpiI GAAGAC 1 cut(s) 288
BsaI GGTCTC 1 cut(s) 374
Bsc4I CCNNNNNNNGG 3 cut(s) 133, 307, 391
Bse1I ACTGG 1 cut(s) 120
BseBI CCWGG 2 cut(s) 91, 291
BseGI GGATG 2 cut(s) 124, 375
BseLI CCNNNNNNNGG 3 cut(s) 133, 307, 391
BseMII CTCAG 2 cut(s) 141, 390
BseNI ACTGG 1 cut(s) 120
BseRI GAGGAG 2 cut(s) 191, 416
BseXI GCAGC 1 cut(s) 309
Bsh1285I CGRYCG 1 cut(s) 174
BshFI GGCC 3 cut(s) 294, 346, 443
BsiEI CGRYCG 1 cut(s) 174
BslFI GGGAC 1 cut(s) 155
BslI CCNNNNNNNGG 3 cut(s) 133, 307, 391
BsmAI GTCTC 1 cut(s) 374
BsmFI GGGAC 1 cut(s) 155
BsnI GGCC 3 cut(s) 294, 346, 443
Bso31I GGTCTC 1 cut(s) 374
Bsp143I GATC 3 cut(s) 3, 49, 171
BspACI CCGC 1 cut(s) 32
BspANI GGCC 3 cut(s) 294, 346, 443
BspCNI CTCAG 2 cut(s) 142, 389
BspLI GGNNCC 4 cut(s) 105, 143, 144, 180
BspPI GGATC 1 cut(s) 44
BspTNI GGTCTC 1 cut(s) 374
BsrI ACTGG 1 cut(s) 120
BssMI GATC 3 cut(s) 3, 49, 171
Bst2UI CCWGG 2 cut(s) 91, 291
Bst4CI ACNGT 1 cut(s) 112
BstDEI CTNAG 3 cut(s) 150, 208, 376
BstF5I GGATG 2 cut(s) 124, 375
BstKTI GATC 3 cut(s) 6, 52, 174
BstMAI GTCTC 1 cut(s) 374
BstMBI GATC 3 cut(s) 3, 49, 171
BstMCI CGRYCG 1 cut(s) 174
BstMWI GCNNNNNNNGC 1 cut(s) 352
BstNI CCWGG 2 cut(s) 91, 291
BstNSI RCATGY 1 cut(s) 289
BstPAI GACNNNNGTC 1 cut(s) 386
BstSCI CCNGG 2 cut(s) 89, 289
BstV1I GCAGC 1 cut(s) 309
BstV2I GAAGAC 1 cut(s) 288
BstX2I RGATCY 1 cut(s) 49
BstYI RGATCY 1 cut(s) 49
BsuRI GGCC 3 cut(s) 294, 346, 443
BtsCI GGATG 2 cut(s) 124, 375
BtsIMutI CAGTG 1 cut(s) 147
Cfr13I GGNCC 1 cut(s) 142
Csp6I GTAC 5 cut(s) 94, 113, 205, 277, 448
CspCI CAANNNNNGTGG 2 cut(s) 171, 206
CviAII CATG 1 cut(s) 286
CviQI GTAC 5 cut(s) 94, 113, 205, 277, 448
DdeI CTNAG 3 cut(s) 150, 208, 376
DpnI GATC 3 cut(s) 5, 51, 173
DpnII GATC 3 cut(s) 3, 49, 171
EaeI YGGCCR 1 cut(s) 441
EciI GGCGGA 1 cut(s) 47
Eco147I AGGCCT 2 cut(s) 294, 346
Eco31I GGTCTC 1 cut(s) 374
Eco47I GGWCC 1 cut(s) 142
EcoO109I RGGNCCY 1 cut(s) 142
EcoRII CCWGG 2 cut(s) 89, 289
FaeI CATG 1 cut(s) 289
FaiI YATR 4 cut(s) 72, 81, 255, 287
FaqI GGGAC 1 cut(s) 155
FatI CATG 1 cut(s) 285
Fnu4HI GCNGC 1 cut(s) 323
FokI GGATG 2 cut(s) 131, 382
Fsp4HI GCNGC 1 cut(s) 323
FspBI CTAG 1 cut(s) 216
GluI GCNGC 1 cut(s) 323
HaeIII GGCC 3 cut(s) 294, 346, 443
Hin1II CATG 1 cut(s) 289
HincII GTYRAC 1 cut(s) 333
HindII GTYRAC 1 cut(s) 333
HinfI GANTC 1 cut(s) 40
HpaI GTTAAC 1 cut(s) 333
HphI GGTGA 2 cut(s) 31, 49
Hpy166II GTNNAC 1 cut(s) 333
Hpy188I TCNGA 1 cut(s) 379
Hpy8I GTNNAC 1 cut(s) 333
HpyAV CCTTC 1 cut(s) 360
HpyCH4III ACNGT 1 cut(s) 112
HpyCH4IV ACGT 1 cut(s) 329
HpyCH4V TGCA 2 cut(s) 74, 418
HpyF10VI GCNNNNNNNGC 1 cut(s) 352
HpyF3I CTNAG 3 cut(s) 150, 208, 376
HpySE526I ACGT 1 cut(s) 329
Hsp92II CATG 1 cut(s) 289
KflI GGGWCCC 1 cut(s) 142
KspAI GTTAAC 1 cut(s) 333
Kzo9I GATC 3 cut(s) 3, 49, 171
LmnI GCTCC 2 cut(s) 103, 178
Lsp1109I GCAGC 1 cut(s) 309
LweI GCATC 2 cut(s) 76, 438
MaeI CTAG 1 cut(s) 216
MaeII ACGT 1 cut(s) 329
MaeIII GTNAC 1 cut(s) 19
MalI GATC 3 cut(s) 5, 51, 173
MboI GATC 3 cut(s) 3, 49, 171
MboII GAAGA 1 cut(s) 293
MflI RGATCY 1 cut(s) 49
MlsI TGGCCA 1 cut(s) 443
MluCI AATT 4 cut(s) 76, 239, 412, 451
MluNI TGGCCA 1 cut(s) 443
MnlI CCTC 9 cut(s) 28, 63, 138, 169, 222, 262, 336, 394, 397
Mox20I TGGCCA 1 cut(s) 443
MscI TGGCCA 1 cut(s) 443
MseI TTAA 1 cut(s) 332
Msp20I TGGCCA 1 cut(s) 443
MspA1I CMGCKG 1 cut(s) 322
MspR9I CCNGG 2 cut(s) 91, 291
MvaI CCWGG 2 cut(s) 91, 291
MwoI GCNNNNNNNGC 1 cut(s) 352
NdeII GATC 3 cut(s) 3, 49, 171
NlaIII CATG 1 cut(s) 289
NlaIV GGNNCC 4 cut(s) 105, 143, 144, 180
NmuCI GTSAC 1 cut(s) 19
NspI RCATGY 1 cut(s) 289
PceI AGGCCT 2 cut(s) 294, 346
PfeI GAWTC 1 cut(s) 40
PflMI CCANNNNNTGG 1 cut(s) 391
PkrI GCNGC 1 cut(s) 324
Ple19I CGATCG 1 cut(s) 174
PpuMI RGGWCCY 1 cut(s) 142
PshAI GACNNNNGTC 1 cut(s) 386
Psp1406I AACGTT 1 cut(s) 329
Psp5II RGGWCCY 1 cut(s) 142
Psp6I CCWGG 2 cut(s) 89, 289
PspGI CCWGG 2 cut(s) 89, 289
PspN4I GGNNCC 4 cut(s) 105, 143, 144, 180
PspPI GGNCC 1 cut(s) 142
PspPPI RGGWCCY 1 cut(s) 142
PsuI RGATCY 1 cut(s) 49
PvuI CGATCG 1 cut(s) 174
PvuII CAGCTG 1 cut(s) 322
RsaI GTAC 5 cut(s) 95, 114, 206, 278, 449
RsaNI GTAC 5 cut(s) 94, 113, 205, 277, 448
SaqAI TTAA 1 cut(s) 332
SatI GCNGC 1 cut(s) 323
Sau3AI GATC 3 cut(s) 3, 49, 171
Sau96I GGNCC 1 cut(s) 142
ScrFI CCNGG 2 cut(s) 91, 291
SetI ASST 6 cut(s) 39, 95, 138, 324, 332, 408
SfaNI GCATC 2 cut(s) 76, 438
SinI GGWCC 1 cut(s) 142
Sse9I AATT 4 cut(s) 76, 239, 412, 451
SseBI AGGCCT 2 cut(s) 294, 346
SsiI CCGC 1 cut(s) 32
SspMI CTAG 1 cut(s) 216
StuI AGGCCT 2 cut(s) 294, 346
StyD4I CCNGG 2 cut(s) 89, 289
TaaI ACNGT 1 cut(s) 112
TaiI ACGT 1 cut(s) 332
TaqI TCGA 1 cut(s) 174
TasI AATT 4 cut(s) 76, 239, 412, 451
TatI WGTACW 1 cut(s) 447
TfiI GAWTC 1 cut(s) 40
Tru1I TTAA 1 cut(s) 332
Tru9I TTAA 1 cut(s) 332
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 1 cut(s) 322
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 1 cut(s) 386
TspGWI ACGGA 1 cut(s) 350
TspRI CASTG 1 cut(s) 154
Van91I CCANNNNNTGG 1 cut(s) 391
VpaK11BI GGWCC 1 cut(s) 142
XapI RAATTY 1 cut(s) 412
XceI RCATGY 1 cut(s) 289
XcmI CCANNNNNNNNNTGG 1 cut(s) 97
XspI CTAG 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.