Rmu_sc0002934.1_g000007

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002934.1
Physical Location & Seq
Forward (+)
14559 .. 14990
432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002934.1_g000007.1.cds

Sequence Viewer

Length: 432 bp
atggattacgatcttccaggggaagggatagaggccttccattctttgtacgaacagttgtcctcgtacttggtagaaaaagaggcctacgatcaagttgcgatcttagaaattgttaatgaggagttctctgatcatgaagaggaggttcaactcaccccagcggcattggatgacacgcctctaaaggttagggaccctactgagaaggtcaatctgggaacaactgatgcgcccatggaagtggctatcagcacttatttagagcctagtaagaagcagaggctgattaccttattgctggaatacaaagactgcttcgcgaaaaagtacgaagacatgccaggcctatcaccaggcttggtatgccaccagctgccaacgctgcctgataagaagcctgtgaagcaacaaccgcgaagaatgaactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

143

Amino Acids

16.28

Weight (kDa)

4.6

Isoelectric Point (pI)

50.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 323, 418
AciI CCGC 2 cut(s) 164, 416
AfaI GTAC 3 cut(s) 50, 68, 332
AfiI CCNNNNNNNGG 1 cut(s) 23
AgsI TTSAA 1 cut(s) 152
AjnI CCWGG 3 cut(s) 16, 343, 355
AluBI AGCT 1 cut(s) 376
AluI AGCT 1 cut(s) 376
AlwNI CAGNNNCTG 1 cut(s) 286
AoxI GGCC 3 cut(s) 33, 84, 346
ApeKI GCWGC 2 cut(s) 376, 385
AspLEI GCGC 1 cut(s) 235
AspS9I GGNCC 1 cut(s) 196
AsuHPI GGTGA 2 cut(s) 148, 345
AvaII GGWCC 1 cut(s) 196
BbsI GAAGAC 1 cut(s) 342
BbvI GCAGC 2 cut(s) 363, 372
BcgI CGANNNNNNTGC 2 cut(s) 80, 114
BciT130I CCWGG 3 cut(s) 18, 345, 357
BclI TGATCA 1 cut(s) 133
BfaI CTAG 2 cut(s) 270, 430
BisI GCNGC 3 cut(s) 165, 377, 386
BlsI GCNGC 3 cut(s) 166, 378, 387
Bme1390I CCNGG 3 cut(s) 18, 345, 357
Bme18I GGWCC 1 cut(s) 196
BmgT120I GGNCC 1 cut(s) 196
BmiI GGNNCC 2 cut(s) 197, 198
BmrFI CCNGG 3 cut(s) 18, 345, 357
BmsI GCATC 1 cut(s) 220
BpiI GAAGAC 1 cut(s) 342
BplI GAGNNNNNCTC 2 cut(s) 113, 145
BsaBI GATNNNNATC 1 cut(s) 9
BsaJI CCNNGG 2 cut(s) 17, 237
Bsc4I CCNNNNNNNGG 1 cut(s) 23
Bse8I GATNNNNATC 1 cut(s) 9
BseBI CCWGG 3 cut(s) 18, 345, 357
BseDI CCNNGG 2 cut(s) 17, 237
BseGI GGATG 1 cut(s) 178
BseJI GATNNNNATC 1 cut(s) 9
BseLI CCNNNNNNNGG 1 cut(s) 23
BseMII CTCAG 1 cut(s) 195
BseRI GAGGAG 2 cut(s) 137, 158
BseXI GCAGC 2 cut(s) 363, 372
BseYI CCCAGC 1 cut(s) 160
Bsh1236I CGCG 2 cut(s) 323, 418
BshFI GGCC 3 cut(s) 35, 86, 348
BslFI GGGAC 1 cut(s) 209
BslI CCNNNNNNNGG 1 cut(s) 23
BsmFI GGGAC 1 cut(s) 209
BsnI GGCC 3 cut(s) 35, 86, 348
Bsp143I GATC 4 cut(s) 10, 91, 102, 133
Bsp19I CCATGG 1 cut(s) 237
Bsp68I TCGCGA 1 cut(s) 323
BspACI CCGC 2 cut(s) 164, 416
BspANI GGCC 3 cut(s) 35, 86, 348
BspCNI CTCAG 1 cut(s) 196
BspFNI CGCG 2 cut(s) 323, 418
BspHI TCATGA 1 cut(s) 136
BspLI GGNNCC 2 cut(s) 197, 198
BssECI CCNNGG 2 cut(s) 17, 237
BssMI GATC 4 cut(s) 10, 91, 102, 133
BssT1I CCWWGG 1 cut(s) 237
Bst2UI CCWGG 3 cut(s) 18, 345, 357
Bst4CI ACNGT 1 cut(s) 57
Bst6I CTCTTC 1 cut(s) 135
BstDEI CTNAG 2 cut(s) 106, 204
BstDSI CCRYGG 1 cut(s) 237
BstF5I GGATG 1 cut(s) 178
BstFNI CGCG 2 cut(s) 323, 418
BstHHI GCGC 1 cut(s) 235
BstKTI GATC 4 cut(s) 13, 94, 105, 136
BstMBI GATC 4 cut(s) 10, 91, 102, 133
BstMWI GCNNNNNNNGC 5 cut(s) 366, 382, 385, 406, 415
BstNI CCWGG 3 cut(s) 18, 345, 357
BstNSI RCATGY 1 cut(s) 343
BstSCI CCNGG 3 cut(s) 16, 343, 355
BstUI CGCG 2 cut(s) 323, 418
BstV1I GCAGC 2 cut(s) 363, 372
BstV2I GAAGAC 1 cut(s) 342
BstXI CCANNNNNNTGG 1 cut(s) 244
BsuRI GGCC 3 cut(s) 35, 86, 348
BtgI CCRYGG 1 cut(s) 237
BtsCI GGATG 1 cut(s) 178
BtuMI TCGCGA 1 cut(s) 323
CaiI CAGNNNCTG 1 cut(s) 286
CciI TCATGA 1 cut(s) 136
CfoI GCGC 1 cut(s) 235
Cfr13I GGNCC 1 cut(s) 196
Csp6I GTAC 3 cut(s) 49, 67, 331
CviAII CATG 3 cut(s) 137, 238, 340
CviJI RGCY 9 cut(s) 35, 86, 248, 268, 286, 348, 360, 376, 400
CviKI_1 RGCY 9 cut(s) 35, 86, 248, 268, 286, 348, 360, 376, 400
CviQI GTAC 3 cut(s) 49, 67, 331
DdeI CTNAG 2 cut(s) 106, 204
DpnI GATC 4 cut(s) 12, 93, 104, 135
DpnII GATC 4 cut(s) 10, 91, 102, 133
Eam1104I CTCTTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 135
Eco130I CCWWGG 1 cut(s) 237
Eco147I AGGCCT 3 cut(s) 35, 86, 348
Eco47I GGWCC 1 cut(s) 196
EcoO109I RGGNCCY 1 cut(s) 196
EcoRII CCWGG 3 cut(s) 16, 343, 355
EcoT14I CCWWGG 1 cut(s) 237
ErhI CCWWGG 1 cut(s) 237
FaeI CATG 3 cut(s) 140, 241, 343
FaiI YATR 4 cut(s) 138, 239, 341, 367
FaqI GGGAC 1 cut(s) 209
FatI CATG 3 cut(s) 136, 237, 339
FbaI TGATCA 1 cut(s) 133
Fnu4HI GCNGC 3 cut(s) 165, 377, 386
FokI GGATG 1 cut(s) 185
Fsp4HI GCNGC 3 cut(s) 165, 377, 386
FspBI CTAG 2 cut(s) 270, 430
GlaI GCGC 1 cut(s) 234
GluI GCNGC 3 cut(s) 165, 377, 386
GsaI CCCAGC 1 cut(s) 164
HaeIII GGCC 3 cut(s) 35, 86, 348
HhaI GCGC 1 cut(s) 235
Hin1II CATG 3 cut(s) 140, 241, 343
Hin6I GCGC 1 cut(s) 233
HinP1I GCGC 1 cut(s) 233
HphI GGTGA 2 cut(s) 148, 345
Hpy188I TCNGA 1 cut(s) 133
Hpy188III TCNNGA 2 cut(s) 137, 322
HpyAV CCTTC 3 cut(s) 17, 46, 202
HpyCH4III ACNGT 1 cut(s) 57
HpyF10VI GCNNNNNNNGC 5 cut(s) 366, 382, 385, 406, 415
HpyF3I CTNAG 2 cut(s) 106, 204
Hsp92II CATG 3 cut(s) 140, 241, 343
HspAI GCGC 1 cut(s) 233
KflI GGGWCCC 1 cut(s) 196
Ksp22I TGATCA 1 cut(s) 133
Kzo9I GATC 4 cut(s) 10, 91, 102, 133
Lsp1109I GCAGC 2 cut(s) 363, 372
LweI GCATC 1 cut(s) 220
MaeI CTAG 2 cut(s) 270, 430
MalI GATC 4 cut(s) 12, 93, 104, 135
MboI GATC 4 cut(s) 10, 91, 102, 133
MboII GAAGA 4 cut(s) 5, 152, 347, 432
MluCI AATT 1 cut(s) 111
MnlI CCTC 8 cut(s) 25, 73, 76, 115, 136, 139, 192, 276
MseI TTAA 1 cut(s) 117
MslI CAYNNNNRTG 1 cut(s) 242
MspA1I CMGCKG 2 cut(s) 164, 376
MspR9I CCNGG 3 cut(s) 18, 345, 357
MvaI CCWGG 3 cut(s) 18, 345, 357
MvnI CGCG 2 cut(s) 323, 418
MwoI GCNNNNNNNGC 5 cut(s) 366, 382, 385, 406, 415
NcoI CCATGG 1 cut(s) 237
NdeII GATC 4 cut(s) 10, 91, 102, 133
NlaIII CATG 3 cut(s) 140, 241, 343
NlaIV GGNNCC 2 cut(s) 197, 198
NruI TCGCGA 1 cut(s) 323
NspI RCATGY 1 cut(s) 343
PagI TCATGA 1 cut(s) 136
PceI AGGCCT 3 cut(s) 35, 86, 348
PkrI GCNGC 3 cut(s) 166, 378, 387
PpuMI RGGWCCY 1 cut(s) 196
Psp5II RGGWCCY 1 cut(s) 196
Psp6I CCWGG 3 cut(s) 16, 343, 355
PspFI CCCAGC 1 cut(s) 160
PspGI CCWGG 3 cut(s) 16, 343, 355
PspN4I GGNNCC 2 cut(s) 197, 198
PspPI GGNCC 1 cut(s) 196
PspPPI RGGWCCY 1 cut(s) 196
PstNI CAGNNNCTG 1 cut(s) 286
PvuII CAGCTG 1 cut(s) 376
RruI TCGCGA 1 cut(s) 323
RsaI GTAC 3 cut(s) 50, 68, 332
RsaNI GTAC 3 cut(s) 49, 67, 331
RseI CAYNNNNRTG 1 cut(s) 242
SaqAI TTAA 1 cut(s) 117
SatI GCNGC 3 cut(s) 165, 377, 386
Sau3AI GATC 4 cut(s) 10, 91, 102, 133
Sau96I GGNCC 1 cut(s) 196
ScrFI CCNGG 3 cut(s) 18, 345, 357
SetI ASST 5 cut(s) 150, 192, 213, 296, 378
SfaNI GCATC 1 cut(s) 220
SinI GGWCC 1 cut(s) 196
SmiMI CAYNNNNRTG 1 cut(s) 242
Sse9I AATT 1 cut(s) 111
SseBI AGGCCT 3 cut(s) 35, 86, 348
SsiI CCGC 2 cut(s) 164, 416
SspMI CTAG 2 cut(s) 270, 430
StuI AGGCCT 3 cut(s) 35, 86, 348
StyD4I CCNGG 3 cut(s) 16, 343, 355
StyI CCWWGG 1 cut(s) 237
TaaI ACNGT 1 cut(s) 57
TasI AATT 1 cut(s) 111
TauI GCSGC 1 cut(s) 167
Tru1I TTAA 1 cut(s) 117
Tru9I TTAA 1 cut(s) 117
TseI GCWGC 2 cut(s) 376, 385
TspDTI ATGAA 1 cut(s) 153
VpaK11BI GGWCC 1 cut(s) 196
XceI RCATGY 1 cut(s) 343
XspI CTAG 2 cut(s) 270, 430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.