Rmu_sc0002014.1_g000019

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002014.1
Physical Location & Seq
Forward (+)
81343 .. 81759
417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002014.1_g000019.1.cds

Sequence Viewer

Length: 417 bp
atggattacgaccttccagaggaagggatagaggccttccactctctgcatgaaagactattctctttcctggtggaaaaagaggcctatgatcgtgtcgcaaccttggaaattgtcaacgaggacttctctgaccaagaaaaagaagacgaagaagaaattcagcttgttccagtagcgttggatgacacccctccaaaggtcagggaccctacgaagaaagtcaatcttggaacagtagctgaacctatggaagtggctatcagtgcttacttagagcctagcaagagaaagaggctcattgatttgttactagagttcaaagactgcttcgcggagaaatatgaagacatgcccgcctgtcaccggacttggtttgccatcaactaccaacactccctgacaagaggcctgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

138

Amino Acids

16.06

Weight (kDa)

4.56

Isoelectric Point (pI)

48.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000176)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21383 FvH4_2g06271 FvH4_2g23662 FvH4_2g35580 FvH4_3g27863 FvH4_4g05274 FvH4_4g18553 FvH4_4g21611 FvH4_5g26253 FvH4_5g34301 FvH4_6g31922 FvH4_7g12391
pyrus_communis pycom03g12260 pycom10g07780 pycom12g20020 pycom15g29760 pycom16g11740 pycom976g00240
rosa_chinensis RchiOBHm_Chr2g0121061 RchiOBHm_Chr5g0033131 RchiOBHm_Chr6g0263211
rosa_multiflora Rmu_co7975030.1_g000001 Rmu_co8030416.1_g000001 Rmu_co8076880.1_g000001 Rmu_co8153002.1_g000001 Rmu_co8164780.1_g000001 Rmu_co8199530.1_g000001 Rmu_co8226177.1_g000002 Rmu_co8305941.1_g000001 Rmu_co8331357.1_g000001 Rmu_co8346103.1_g000001 Rmu_co8386779.1_g000001 Rmu_co8415559.1_g000002 Rmu_co8420415.1_g000002 Rmu_co8517321.1_g000001 Rmu_co8522293.1_g000007 Rmu_sc0000029.1_g000020 Rmu_sc0000147.1_g000010 Rmu_sc0000240.1_g000068 Rmu_sc0000276.1_g000040 Rmu_sc0000322.1_g000020 Rmu_sc0000338.1_g000010 Rmu_sc0000347.1_g000012 Rmu_sc0000461.1_g000002 Rmu_sc0000559.1_g000028 Rmu_sc0000594.1_g000033 Rmu_sc0000613.1_g000009 Rmu_sc0000704.1_g000027 Rmu_sc0000740.1_g000054 Rmu_sc0001051.1_g000021 Rmu_sc0001069.1_g000038 Rmu_sc0001113.1_g000021 Rmu_sc0001250.1_g000030 Rmu_sc0001395.1_g000017 Rmu_sc0001396.1_g000005 Rmu_sc0001738.1_g000043 Rmu_sc0001887.1_g000006 Rmu_sc0001898.1_g000006 Rmu_sc0002014.1_g000019 Rmu_sc0002270.1_g000036 Rmu_sc0002532.1_g000023 Rmu_sc0002638.1_g000047 Rmu_sc0002690.1_g000020 Rmu_sc0002784.1_g000048 Rmu_sc0002882.1_g000024 Rmu_sc0002934.1_g000006 Rmu_sc0002934.1_g000007 Rmu_sc0002938.1_g000028 Rmu_sc0003044.1_g000017 Rmu_sc0003252.1_g000007 Rmu_sc0003737.1_g000023 Rmu_sc0003809.1_g000028 Rmu_sc0003809.1_g000029 Rmu_sc0003936.1_g000019 Rmu_sc0004001.1_g000011 Rmu_sc0004059.1_g000014 Rmu_sc0004101.1_g000022 Rmu_sc0004174.1_g000017 Rmu_sc0004206.1_g000017 Rmu_sc0004206.1_g000018 Rmu_sc0004243.1_g000008 Rmu_sc0004283.1_g000024 Rmu_sc0004549.1_g000015 Rmu_sc0004718.1_g000011 Rmu_sc0004941.1_g000039 Rmu_sc0005112.1_g000017 Rmu_sc0005125.1_g000028 Rmu_sc0005143.1_g000007 Rmu_sc0005147.1_g000009 Rmu_sc0005260.1_g000001 Rmu_sc0005322.1_g000010 Rmu_sc0005454.1_g000008 Rmu_sc0005652.1_g000020 Rmu_sc0005659.1_g000006 Rmu_sc0006059.1_g000057 Rmu_sc0006129.1_g000021 Rmu_sc0006300.1_g000007 Rmu_sc0006561.1_g000011 Rmu_sc0007612.1_g000036 Rmu_sc0007856.1_g000004 Rmu_sc0009191.1_g000019 Rmu_sc0009191.1_g000020 Rmu_sc0009481.1_g000010 Rmu_sc0009901.1_g000002 Rmu_sc0009968.1_g000001 Rmu_sc0010072.1_g000006 Rmu_sc0010090.1_g000011 Rmu_sc0010674.1_g000003 Rmu_sc0011142.1_g000002 Rmu_sc0011514.1_g000004 Rmu_sc0011534.1_g000006 Rmu_sc0011803.1_g000007 Rmu_sc0013216.1_g000009 Rmu_sc0014482.1_g000002 Rmu_sc0015325.1_g000008 Rmu_sc0019673.1_g000001 Rmu_sc0021680.1_g000002 Rmu_sc0022642.1_g000001 Rmu_sc0023778.1_g000005 Rmu_sc0023942.1_g000001 Rmu_sc0024195.1_g000012 Rmu_sc0026069.1_g000002 Rmu_sc0026814.1_g000001 Rmu_sc0028519.1_g000001 Rmu_sc0031008.1_g000002 Rmu_sc0031197.1_g000001 Rmu_sc0031293.1_g000001 Rmu_sc0031294.1_g000001 Rmu_sc0031646.1_g000001 Rmu_sc0034742.1_g000002 Rmu_sc0036436.1_g000001 Rmu_sc0036437.1_g000001 Rmu_sc0042802.1_g000001 Rmu_ssc0000127.1_g000052 Rmu_ssc0000262.1_g000019 Rmu_ssc0000398.1_g000007 Rmu_ssc0000480.1_g000050
rosa_roxburghii Rroxscaffold_174G00435290 Rroxscaffold_177G00434320 Rroxscaffold_178G00437300 Rroxscaffold_180G00433410 Rroxscaffold_1G00010240 Rroxscaffold_1G00020730 Rroxscaffold_1G00059300 Rroxscaffold_2G00077380 Rroxscaffold_2G00077690 Rroxscaffold_3G00218240 Rroxscaffold_3G00223180 Rroxscaffold_3G00223190 Rroxscaffold_3G00255440 Rroxscaffold_3G00255450 Rroxscaffold_3G00259080 Rroxscaffold_3G00274700 Rroxscaffold_4G00306470 Rroxscaffold_4G00316750 Rroxscaffold_4G00323390 Rroxscaffold_4G00331230 Rroxscaffold_5G00339240 Rroxscaffold_5G00339550 Rroxscaffold_5G00378050 Rroxscaffold_6G00392800 Rroxscaffold_7G00163490 Rroxscaffold_7G00199370
rosa_wichuraiana Rw0G015150 Rw1G007650 Rw3G005560 Rw3G028190 Rw5G030760 Rw6G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 335
AciI CCGC 2 cut(s) 335, 357
AcsI RAATTY 1 cut(s) 159
AfiI CCNNNNNNNGG 4 cut(s) 19, 23, 199, 366
AgsI TTSAA 1 cut(s) 322
AjnI CCWGG 1 cut(s) 69
AluBI AGCT 2 cut(s) 166, 242
AluI AGCT 2 cut(s) 166, 242
AlwNI CAGNNNCTG 1 cut(s) 242
AoxI GGCC 3 cut(s) 33, 84, 409
ApoI RAATTY 1 cut(s) 159
Asp700I GAANNNNTTC 1 cut(s) 159
AspS9I GGNCC 1 cut(s) 208
AsuHPI GGTGA 1 cut(s) 356
AvaII GGWCC 1 cut(s) 208
BbsI GAAGAC 2 cut(s) 153, 354
BccI CCATC 1 cut(s) 389
BciT130I CCWGG 1 cut(s) 71
BfaI CTAG 2 cut(s) 282, 314
Bme1390I CCNGG 1 cut(s) 71
Bme18I GGWCC 1 cut(s) 208
BmgT120I GGNCC 1 cut(s) 208
BmiI GGNNCC 2 cut(s) 209, 210
BmrFI CCNGG 1 cut(s) 71
BpiI GAAGAC 2 cut(s) 153, 354
BplI GAGNNNNNCTC 2 cut(s) 113, 145
BsaJI CCNNGG 1 cut(s) 105
BsaWI WCCGGW 1 cut(s) 366
BsaXI ACNNNNNCTCC 2 cut(s) 380, 410
Bsc4I CCNNNNNNNGG 4 cut(s) 19, 23, 199, 366
Bse1I ACTGG 1 cut(s) 173
BseBI CCWGG 1 cut(s) 71
BseDI CCNNGG 1 cut(s) 105
BseGI GGATG 1 cut(s) 190
BseLI CCNNNNNNNGG 4 cut(s) 19, 23, 199, 366
BseNI ACTGG 1 cut(s) 173
Bsh1236I CGCG 1 cut(s) 335
BshFI GGCC 3 cut(s) 35, 86, 411
BsiSI CCGG 1 cut(s) 367
BslFI GGGAC 1 cut(s) 221
BslI CCNNNNNNNGG 4 cut(s) 19, 23, 199, 366
BsmFI GGGAC 1 cut(s) 221
BsnI GGCC 3 cut(s) 35, 86, 411
Bsp143I GATC 1 cut(s) 91
BspACI CCGC 2 cut(s) 335, 357
BspANI GGCC 3 cut(s) 35, 86, 411
BspFNI CGCG 1 cut(s) 335
BspLI GGNNCC 2 cut(s) 209, 210
BsrI ACTGG 1 cut(s) 173
BssECI CCNNGG 1 cut(s) 105
BssMI GATC 1 cut(s) 91
BssT1I CCWWGG 1 cut(s) 105
Bst2UI CCWGG 1 cut(s) 71
Bst4CI ACNGT 1 cut(s) 238
BstC8I GCNNGC 1 cut(s) 357
BstDEI CTNAG 1 cut(s) 274
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 1 cut(s) 190
BstFNI CGCG 1 cut(s) 335
BstKTI GATC 1 cut(s) 94
BstMBI GATC 1 cut(s) 91
BstMWI GCNNNNNNNGC 1 cut(s) 266
BstNI CCWGG 1 cut(s) 71
BstNSI RCATGY 1 cut(s) 355
BstSCI CCNGG 1 cut(s) 69
BstUI CGCG 1 cut(s) 335
BstV2I GAAGAC 2 cut(s) 153, 354
BsuRI GGCC 3 cut(s) 35, 86, 411
BtsCI GGATG 1 cut(s) 190
BtsIMutI CAGTG 1 cut(s) 271
Cac8I GCNNGC 1 cut(s) 357
CaiI CAGNNNCTG 1 cut(s) 242
Cfr13I GGNCC 1 cut(s) 208
CviAII CATG 2 cut(s) 50, 352
CviJI RGCY 8 cut(s) 35, 86, 166, 242, 260, 280, 298, 411
CviKI_1 RGCY 8 cut(s) 35, 86, 166, 242, 260, 280, 298, 411
DdeI CTNAG 1 cut(s) 274
DpnI GATC 1 cut(s) 93
DpnII GATC 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 105
Eco147I AGGCCT 3 cut(s) 35, 86, 411
Eco47I GGWCC 1 cut(s) 208
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoO109I RGGNCCY 1 cut(s) 208
EcoRII CCWGG 1 cut(s) 69
EcoT14I CCWWGG 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 105
FaeI CATG 2 cut(s) 53, 355
FaiI YATR 5 cut(s) 51, 90, 251, 345, 353
FalI AAGNNNNNCTT 2 cut(s) 213, 245
FaqI GGGAC 1 cut(s) 221
FatI CATG 2 cut(s) 49, 351
FauI CCCGC 1 cut(s) 364
FokI GGATG 1 cut(s) 197
FspBI CTAG 2 cut(s) 282, 314
HaeIII GGCC 3 cut(s) 35, 86, 411
HapII CCGG 1 cut(s) 367
Hin1II CATG 2 cut(s) 53, 355
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HpaII CCGG 1 cut(s) 367
HphI GGTGA 1 cut(s) 356
Hpy166II GTNNAC 1 cut(s) 118
Hpy188I TCNGA 1 cut(s) 133
Hpy188III TCNNGA 1 cut(s) 17
Hpy8I GTNNAC 1 cut(s) 118
HpyAV CCTTC 3 cut(s) 17, 23, 46
HpyCH4III ACNGT 1 cut(s) 238
HpyCH4V TGCA 1 cut(s) 49
HpyF10VI GCNNNNNNNGC 1 cut(s) 266
HpyF3I CTNAG 1 cut(s) 274
Hsp92II CATG 2 cut(s) 53, 355
KflI GGGWCCC 1 cut(s) 208
Kzo9I GATC 1 cut(s) 91
LpnPI CCDG 8 cut(s) 30, 56, 83, 186, 190, 373, 380, 413
MaeI CTAG 2 cut(s) 282, 314
MaeIII GTNAC 2 cut(s) 309, 362
MalI GATC 1 cut(s) 93
MboI GATC 1 cut(s) 91
MboII GAAGA 5 cut(s) 158, 164, 167, 229, 359
MluCI AATT 2 cut(s) 111, 159
MmeI TCCRAC 1 cut(s) 162
MnlI CCTC 7 cut(s) 13, 25, 76, 115, 204, 288, 401
MroXI GAANNNNTTC 1 cut(s) 159
MspI CCGG 1 cut(s) 367
MspR9I CCNGG 1 cut(s) 71
MvaI CCWGG 1 cut(s) 71
MvnI CGCG 1 cut(s) 335
MwoI GCNNNNNNNGC 1 cut(s) 266
NdeII GATC 1 cut(s) 91
NlaIII CATG 2 cut(s) 53, 355
NlaIV GGNNCC 2 cut(s) 209, 210
NmuCI GTSAC 1 cut(s) 362
NspI RCATGY 1 cut(s) 355
PceI AGGCCT 3 cut(s) 35, 86, 411
PdmI GAANNNNTTC 1 cut(s) 159
PpuMI RGGWCCY 1 cut(s) 208
Psp5II RGGWCCY 1 cut(s) 208
Psp6I CCWGG 1 cut(s) 69
PspGI CCWGG 1 cut(s) 69
PspN4I GGNNCC 2 cut(s) 209, 210
PspPI GGNCC 1 cut(s) 208
PspPPI RGGWCCY 1 cut(s) 208
PstNI CAGNNNCTG 1 cut(s) 242
Sau3AI GATC 1 cut(s) 91
Sau96I GGNCC 1 cut(s) 208
ScrFI CCNGG 1 cut(s) 71
SetI ASST 6 cut(s) 15, 107, 168, 204, 244, 250
SinI GGWCC 1 cut(s) 208
Sse9I AATT 2 cut(s) 111, 159
SseBI AGGCCT 3 cut(s) 35, 86, 411
SsiI CCGC 2 cut(s) 335, 357
SspMI CTAG 2 cut(s) 282, 314
StuI AGGCCT 3 cut(s) 35, 86, 411
StyD4I CCNGG 1 cut(s) 69
StyI CCWWGG 1 cut(s) 105
TaaI ACNGT 1 cut(s) 238
TasI AATT 2 cut(s) 111, 159
TscAI CASTG 1 cut(s) 271
TseFI GTSAC 1 cut(s) 362
Tsp45I GTSAC 1 cut(s) 362
TspDTI ATGAA 2 cut(s) 66, 360
TspRI CASTG 1 cut(s) 271
VpaK11BI GGWCC 1 cut(s) 208
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 1 cut(s) 159
XceI RCATGY 1 cut(s) 355
XmnI GAANNNNTTC 1 cut(s) 159
XspI CTAG 2 cut(s) 282, 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.