AT1G65810

AAA domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
24476949 .. 24480869
3921 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G65810.3

Sequence Viewer

Length: 3153 bp
ATGGAGCACTTATGGGTAGCAAAAGAAACCAAGAAGAAGGAAAAAATCATCAAAGGAAGAGATTTAGTCGATGTTGTCTTCTCTTGGTCTCTTCGTGATGTGTTAAACTCAAATCTATACAGAGGACAGGTAGGGAAGATTCCTAACACATTCACATCAACCAAAGAGTATTTTGAGTCATTTGTTAAACCGATTATTGAAGAGACACATGCTGATTTGTTGTCAAGTATGGGAACGATACGTCGTGCACAAGCTTTTAAGTTTTGGGAAATCAAGCCAGGGAAAGATTTTAAACCTCCTAGGGATCTTTATTATGAGGTTACTTTGCAGATGACAAATGAGTATATGACCAAAGGAGGTCAAAATCTGTTAGAGGTTAATGATCTTATTGCAGTGACCGATAAGAGGCCTATTCGAATCGATGACTTGAGATTTTCTCATGAGCCTTATTTGCTAGCTCTTGTTTGTGGAGTGAATGAAAATAATCCACATTTGATAACTATTTTGGCTTCTAAGCCAATTATTTTCGACGATGATGACGATATAAAAACGTCGTCGAAGAGAGGAAAGGGTGAGAGGAAAAGCTTAAGTTTCTTTGGGGTTAATTTGATCAACATGATGACAAATATTCGTATTTGGACTGCGTTGCATCCAAACCCCGAAGGAGGAAACTTGAAGCTTATTTCAAGAGTACTTCAAAGCAACAATGAGGTTGATGGAGGAAGTTGTGTTTCTTGTAAAGAAAACAGTGAGAGTGTAGTCTCAGATTACTCAGCTCGAATGCTACGTTCATTTAAACTGAATTCATCTCAAGAGGACGCGATTTTACGTTGTCTTGAAGCTAAAAGTTGTAACCATTCCAACAATATCAAACTTATTTGGGGACCACCGGGCACAGGGAAGACGAAAACAACAAGTGTTCTGCTTTTGAACTTTCTGAAAATGAGATGCAGGACATTGACTTGTGCTCCAACTAACATAGCTGTTTTGGAAGTTTGTTCAAGGCTTGTGAAATTAGTCTCTGAGTCTTTGAGGTTTGATGGGTATGGTCTCGGAGATATAGTGTTGTTTGGCAATAAAGAAAGGATGAAAATCGATGATCGCGAAGATCTTTTCGATGTCTTCCTTGAGTACCGAGTTGATGAGCTTTATAGATGTTTTATGGCTCTGACTGGATGGAGAGCAAATGTAAACCGTATGATCTGTTTGCTCAGTGATCCGAAACACGAGTTTCGCCAATTCAAATCCGTAAATACAACACTTCTCTCGTTTAAGGATTTTGTGGAGGAGAGGCTTAGTAGACTAAGATATGATCTGCATCATCAGTTTACAACTTTGTGTCTCCATTTACCAACTTCTTTGCTCTCCTTTAGGGTGGCGGAAAAGATGAACCAGACTAATAATCTCCTTAGAAACATCGCGGCTTCTGATGTCATGAGAGATGGTTATGGAAGAATGAAATATAAGCTTAAAGATACTGGTGATGAAAATGATTCAAGAACGCAAGATTGTTTGGAGATGTTGACATCGATTTCTATGAGTATCAAACTTCCGGATTTTATATCCAAGTTCGAACTTCAAAAACTCTGCTTAGATAATGCATATCTGTTGTTTTGCACAGCATCAAGCTCTGCTAGGTTACACATGAGTAGTCCAATACAGCTTCTTGTGATTGATGAAGCTGCTCAGTTAAAAGAATGCGAGTCAGCGATACCATTGCAGCTTCGAGGACTTCAACATGCGATTTTGATCGGTGATGAGAAGCAATTGCCTGCAATGATAAAAAGCAATATTGCTTCAGAGGCTGATCTTGGGAGGAGTTTGTTCGAAAGATTGGTGTTGTTGGGACATAATAAACAGTTGCTGAACATGCAGTACCGAATGCATCCTTCGATTAGTATTTTCCCGAACAGAGAGTTTTACGATATGAAGATTTTGGATGCTCCTTCTGTGAGACTGAGAAGTTATGAAAAAAAGTTTCTTCCTGAGAAAATGTATGGACCTTACTCTTTTATCAACATAGCTTATGGAAGAGAACAGTTTGGTGAAGGATATAGTTCGAAAAACCTAGTGGAAGTCTCTGTTGTGGCTGAGATAGTCTCAAAGCTTTACTCAGTATCAAGAAAGACCGGGAGAACGATAAGCGTAGGGGTGATTTCACCTTACAAAGCTCAAGTGTTTGCGATCCAAGAAAGGATAGGCGAAAAGTATAATACCGAAGGGACATTTACAGTGAGTGTTAGGTCTGTAGATGGGTTTCAAGGTGGTGAAGAAGATATCATTATAATCTCAACAGTCAGGTCTAACGGTAATGGAGCTATTGGTTTTTTATCTAACCAACAAAGAACTAATGTAGCACTCACTCGTGCGAGGTATTGCTTATGGATTCTTGGAAACGAAGCGACTTTAACGAACAATAGATCAGTGTGGAGACAGTTGGTAGATGATGCGAAAGCACGAAACTGTTTCCATAATGCAGAAGAAGATGAATCATTAGCTCAGTGTATTGAAAGATCAACAACAGCACTTGATGATCTTAATAAGCTTCAAAACAAGAAGCTTATTTCTTTTGAGAATTCGATATGGAAGGTTTGGCTCAGCTACGAGTTCTTGAAATCTCTGGAAACGATCGTAGACTCGGAAATTAATAAAAGAGTTATGAGCTTTTTGGAGAAGTTATCTAATGGGAAAGAGCTTCATCAAGAGGTTGAGTTTGAAAGTGAGAATTTGTTGAGACAACATGAGTTTGATGATGGCTTAAGTCTTATTTGGGCGATAGATATTTTCAAGAATAATAATCAACATGTACAAGTTTTGAAGATCTGGCAGGTTTTGCCATCTACTGATGTTTCTCGTGTTACAGAACATCTAGAGAAACATTACAGGCGATACACGAAAGGCAAGATAAGTCGGTGTCGATACATATGCTCTCAAGGTGATTTAGTTGTACCAATGCAATGGCCGGTTGATTCCAATTCTTGTTCAAAGAAAGATATTGTAAGCGATGTTTCGAGATCATTTGCGTTGCTCAGTGTTGTGGAAGAGGAAACTGTGAGTCCTAAACCTATCAAGAAACAAGTGAAGCTAAAGAAACTGTGGAAGATTAGAAGAAAGGTTCAACTTTCAACATCTAACCCCAAAGATCCTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1050

Amino Acids

120.26

Weight (kDa)

8.82

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_11 PF13086 266 - 596 7.7e-35 AAA domain
AAA_19 PF13245 287 - 592 3.8e-06 AAA domain
AAA_12 PF13087 604 - 800 2.5e-56 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2285
Acc36I ACCTGC 1 cut(s) 2818
AccI GTMKAC 2 cut(s) 1300, 2634
AccII CGCG 3 cut(s) 821, 1104, 1421
AccIII TCCGGA 1 cut(s) 1552
AciI CCGC 2 cut(s) 1379, 1421
AclWI GGATC 4 cut(s) 312, 1211, 2179, 3137
AcoI YGGCCR 1 cut(s) 2960
AcsI RAATTY 3 cut(s) 802, 2575, 2725
AcuI CTGAAG 1 cut(s) 1782
AfaI GTAC 5 cut(s) 693, 1133, 1877, 2808, 2949
AfiI CCNNNNNNNGG 3 cut(s) 405, 665, 896
AflII CTTAAG 2 cut(s) 586, 2758
AflIII ACRYGT 1 cut(s) 2803
AjnI CCWGG 1 cut(s) 277
Alw21I GWGCWC 3 cut(s) 9, 250, 970
Alw44I GTGCAC 1 cut(s) 246
AlwI GGATC 4 cut(s) 312, 1211, 2179, 3137
AlwNI CAGNNNCTG 2 cut(s) 1805, 1864
Aor13HI TCCGGA 1 cut(s) 1552
AoxI GGCC 2 cut(s) 407, 2960
ApaLI GTGCAC 1 cut(s) 246
ApeKI GCWGC 2 cut(s) 1682, 1720
ApoI RAATTY 3 cut(s) 802, 2575, 2725
AseI ATTAAT 1 cut(s) 2646
AspA2I CCTAGG 1 cut(s) 299
AspS9I GGNCC 2 cut(s) 884, 2000
AsuC2I CCSGG 2 cut(s) 891, 2131
AsuHPI GGTGA 8 cut(s) 584, 1493, 1766, 2057, 2151, 2164, 2279, 2948
AsuII TTCGAA 4 cut(s) 415, 1572, 1827, 2060
AsuNHI GCTAGC 1 cut(s) 454
AvaII GGWCC 2 cut(s) 884, 2000
AvrII CCTAGG 1 cut(s) 299
BaeGI GKGCMC 2 cut(s) 250, 896
BauI CACGAG 3 cut(s) 1226, 2364, 2853
BbsI GAAGAC 3 cut(s) 70, 908, 1114
Bbv12I GWGCWC 3 cut(s) 9, 250, 970
BbvI GCAGC 2 cut(s) 1669, 1732
BccI CCATC 7 cut(s) 710, 1034, 1170, 1436, 2246, 2747, 2845
BcgI CGANNNNNNTGC 4 cut(s) 1699, 1733, 2907, 2941
BciT130I CCWGG 1 cut(s) 279
BclI TGATCA 1 cut(s) 609
BcnI CCSGG 2 cut(s) 891, 2131
BfaI CTAG 5 cut(s) 300, 455, 1635, 2069, 2870
BfmI CTRYAG 1 cut(s) 2247
BfrI CTTAAG 2 cut(s) 586, 2758
BfuAI ACCTGC 1 cut(s) 2818
BglII AGATCT 2 cut(s) 1108, 2820
BisI GCNGC 3 cut(s) 1422, 1683, 1721
BlnI CCTAGG 1 cut(s) 299
BlpI GCTNAGC 1 cut(s) 2597
BlsI GCNGC 3 cut(s) 1423, 1684, 1722
BmcAI AGTACT 1 cut(s) 693
Bme1390I CCNGG 3 cut(s) 279, 891, 2131
Bme18I GGWCC 2 cut(s) 884, 2000
BmgT120I GGNCC 2 cut(s) 884, 2000
BmiI GGNNCC 1 cut(s) 885
BmrFI CCNGG 3 cut(s) 279, 891, 2131
BmsI GCATC 7 cut(s) 658, 938, 1327, 1631, 1894, 1930, 2437
BmtI GCTAGC 1 cut(s) 458
BpiI GAAGAC 3 cut(s) 70, 908, 1114
BplI GAGNNNNNCTC 4 cut(s) 421, 453, 2084, 2116
Bpu1102I GCTNAGC 1 cut(s) 2597
Bpu14I TTCGAA 4 cut(s) 415, 1572, 1827, 2060
BpuEI CTTGAG 5 cut(s) 448, 795, 1148, 2157, 2916
BpuMI CCSGG 2 cut(s) 891, 2131
Bsa29I ATCGAT 3 cut(s) 420, 1095, 1529
BsaBI GATNNNNATC 3 cut(s) 1091, 1317, 1748
BsaI GGTCTC 2 cut(s) 93, 1055
BsaJI CCNNGG 2 cut(s) 278, 299
BsaWI WCCGGW 1 cut(s) 1552
BsaXI ACNNNNNCTCC 4 cut(s) 952, 982, 1047, 1077
Bsc4I CCNNNNNNNGG 3 cut(s) 405, 665, 896
Bse118I RCCGGY 1 cut(s) 2962
Bse1I ACTGG 2 cut(s) 1177, 1483
Bse3DI GCAATG 3 cut(s) 1715, 1782, 2963
Bse8I GATNNNNATC 3 cut(s) 1091, 1317, 1748
BseAI TCCGGA 1 cut(s) 1552
BseBI CCWGG 1 cut(s) 279
BseCI ATCGAT 3 cut(s) 420, 1095, 1529
BseDI CCNNGG 2 cut(s) 278, 299
BseGI GGATG 5 cut(s) 649, 1092, 1181, 1885, 1945
BseJI GATNNNNATC 3 cut(s) 1091, 1317, 1748
BseLI CCNNNNNNNGG 3 cut(s) 405, 665, 896
BseMI GCAATG 3 cut(s) 1715, 1782, 2963
BseNI ACTGG 2 cut(s) 1177, 1483
BseRI GAGGAG 2 cut(s) 1301, 1831
BseSI GKGCMC 2 cut(s) 250, 896
BseXI GCAGC 2 cut(s) 1669, 1732
Bsh1236I CGCG 3 cut(s) 821, 1104, 1421
Bsh1285I CGRYCG 1 cut(s) 2631
BshFI GGCC 2 cut(s) 409, 2962
BshVI ATCGAT 3 cut(s) 420, 1095, 1529
BsiEI CGRYCG 1 cut(s) 2631
BsiHKAI GWGCWC 3 cut(s) 9, 250, 970
BsiSI CCGG 4 cut(s) 890, 1553, 2130, 2963
BslFI GGGAC 3 cut(s) 897, 1860, 2236
BslI CCNNNNNNNGG 3 cut(s) 405, 665, 896
BsmFI GGGAC 3 cut(s) 897, 1860, 2236
BsmI GAATGC 3 cut(s) 786, 1703, 1887
BsnI GGCC 2 cut(s) 409, 2962
Bso31I GGTCTC 2 cut(s) 93, 1055
Bsp119I TTCGAA 4 cut(s) 415, 1572, 1827, 2060
Bsp1286I GDGCHC 4 cut(s) 9, 250, 896, 970
Bsp13I TCCGGA 1 cut(s) 1552
Bsp1407I TGTACA 1 cut(s) 2806
Bsp1720I GCTNAGC 1 cut(s) 2597
Bsp68I TCGCGA 1 cut(s) 1104
BspACI CCGC 2 cut(s) 1379, 1421
BspANI GGCC 2 cut(s) 409, 2962
BspDI ATCGAT 3 cut(s) 420, 1095, 1529
BspEI TCCGGA 1 cut(s) 1552
BspFNI CGCG 3 cut(s) 821, 1104, 1421
BspHI TCATGA 2 cut(s) 439, 1434
BspLI GGNNCC 1 cut(s) 885
BspMI ACCTGC 1 cut(s) 2818
BspOI GCTAGC 1 cut(s) 458
BspPI GGATC 4 cut(s) 312, 1211, 2179, 3137
BspT104I TTCGAA 4 cut(s) 415, 1572, 1827, 2060
BspTI CTTAAG 2 cut(s) 586, 2758
BspTNI GGTCTC 2 cut(s) 93, 1055
BsrDI GCAATG 3 cut(s) 1715, 1782, 2963
BsrFI RCCGGY 1 cut(s) 2962
BsrGI TGTACA 1 cut(s) 2806
BsrI ACTGG 2 cut(s) 1177, 1483
BssAI RCCGGY 1 cut(s) 2962
BssECI CCNNGG 2 cut(s) 278, 299
BssSI CACGAG 3 cut(s) 1226, 2364, 2853
BssT1I CCWWGG 1 cut(s) 299
Bst2BI CACGAG 3 cut(s) 1226, 2364, 2853
Bst2UI CCWGG 1 cut(s) 279
Bst6I CTCTTC 6 cut(s) 52, 96, 195, 554, 2026, 3036
BstAFI CTTAAG 2 cut(s) 586, 2758
BstAPI GCANNNNNTGC 1 cut(s) 2833
BstAUI TGTACA 1 cut(s) 2806
BstBI TTCGAA 4 cut(s) 415, 1572, 1827, 2060
BstC8I GCNNGC 2 cut(s) 456, 1773
BstF5I GGATG 5 cut(s) 649, 1092, 1181, 1885, 1945
BstFNI CGCG 3 cut(s) 821, 1104, 1421
BstMCI CGRYCG 1 cut(s) 2631
BstMWI GCNNNNNNNGC 4 cut(s) 451, 1802, 1870, 2833
BstNI CCWGG 1 cut(s) 279
BstNSI RCATGY 4 cut(s) 212, 1742, 1873, 2807
BstSCI CCNGG 3 cut(s) 277, 889, 2129
BstSFI CTRYAG 1 cut(s) 2247
BstSLI GKGCMC 2 cut(s) 250, 896
BstUI CGCG 3 cut(s) 821, 1104, 1421
BstV1I GCAGC 2 cut(s) 1669, 1732
BstV2I GAAGAC 3 cut(s) 70, 908, 1114
BstX2I RGATCY 4 cut(s) 304, 1108, 2820, 3142
BstXI CCANNNNNNTGG 1 cut(s) 2958
BstYI RGATCY 4 cut(s) 304, 1108, 2820, 3142
Bsu15I ATCGAT 3 cut(s) 420, 1095, 1529
BsuRI GGCC 2 cut(s) 409, 2962
BsuTUI ATCGAT 3 cut(s) 420, 1095, 1529
BtgZI GCGATG 2 cut(s) 1402, 3018
BtsCI GGATG 5 cut(s) 649, 1092, 1181, 1885, 1945
BtsI GCAGTG 1 cut(s) 399
BtsIMutI CAGTG 7 cut(s) 399, 754, 1219, 2238, 2430, 2507, 3037
BtuMI TCGCGA 1 cut(s) 1104
BveI ACCTGC 1 cut(s) 2818
Cac8I GCNNGC 2 cut(s) 456, 1773
CaiI CAGNNNCTG 2 cut(s) 1805, 1864
CciI TCATGA 2 cut(s) 439, 1434
Cfr10I RCCGGY 1 cut(s) 2962
Cfr13I GGNCC 2 cut(s) 884, 2000
ClaI ATCGAT 3 cut(s) 420, 1095, 1529
CseI GACGC 1 cut(s) 827
Csp6I GTAC 5 cut(s) 692, 1132, 1876, 2807, 2948
CviAII CATG 9 cut(s) 209, 440, 616, 1435, 1645, 1739, 1870, 2741, 2804
CviQI GTAC 5 cut(s) 692, 1132, 1876, 2807, 2948
DraI TTTAAA 2 cut(s) 292, 796
EaeI YGGCCR 1 cut(s) 2960
Eam1104I CTCTTC 6 cut(s) 52, 96, 195, 554, 2026, 3036
EarI CTCTTC 6 cut(s) 52, 96, 195, 554, 2026, 3036
EciI GGCGGA 1 cut(s) 1394
Eco130I CCWWGG 1 cut(s) 299
Eco147I AGGCCT 1 cut(s) 409
Eco31I GGTCTC 2 cut(s) 93, 1055
Eco32I GATATC 1 cut(s) 2278
Eco47I GGWCC 2 cut(s) 884, 2000
Eco57I CTGAAG 1 cut(s) 1782
EcoRI GAATTC 2 cut(s) 802, 2575
EcoRII CCWGG 1 cut(s) 277
EcoRV GATATC 1 cut(s) 2278
EcoT14I CCWWGG 1 cut(s) 299
EcoT22I ATGCAT 2 cut(s) 1603, 1887
ErhI CCWWGG 1 cut(s) 299
FaeI CATG 9 cut(s) 212, 443, 619, 1438, 1648, 1742, 1873, 2744, 2807
FaqI GGGAC 3 cut(s) 897, 1860, 2236
FatI CATG 9 cut(s) 208, 439, 615, 1434, 1644, 1738, 1869, 2740, 2803
FauNDI CATATG 1 cut(s) 2924
FbaI TGATCA 1 cut(s) 609
FblI GTMKAC 2 cut(s) 1300, 2634
Fnu4HI GCNGC 3 cut(s) 1422, 1683, 1721
FokI GGATG 5 cut(s) 636, 1099, 1188, 1872, 1952
Fsp4HI GCNGC 3 cut(s) 1422, 1683, 1721
FspBI CTAG 5 cut(s) 300, 455, 1635, 2069, 2870
GluI GCNGC 3 cut(s) 1422, 1683, 1721
HaeIII GGCC 2 cut(s) 409, 2962
HapII CCGG 4 cut(s) 890, 1553, 2130, 2963
HgaI GACGC 1 cut(s) 827
Hin1II CATG 9 cut(s) 212, 443, 619, 1438, 1648, 1742, 1873, 2744, 2807
HincII GTYRAC 1 cut(s) 1524
HindII GTYRAC 1 cut(s) 1524
HindIII AAGCTT 7 cut(s) 252, 583, 677, 1466, 2105, 2543, 2558
HpaII CCGG 4 cut(s) 890, 1553, 2130, 2963
HphI GGTGA 8 cut(s) 584, 1493, 1766, 2057, 2151, 2164, 2279, 2948
Hpy166II GTNNAC 6 cut(s) 248, 1192, 1301, 1329, 1524, 2635
Hpy188I TCNGA 9 cut(s) 766, 939, 1024, 1055, 1170, 1221, 1429, 1801, 2641
Hpy8I GTNNAC 6 cut(s) 248, 1192, 1301, 1329, 1524, 2635
Hpy99I CGWCG 4 cut(s) 246, 533, 556, 559
HpyAV CCTTC 7 cut(s) 31, 656, 1899, 1956, 2042, 2213, 2581
HpyCH4IV ACGT 4 cut(s) 241, 551, 787, 829
HpyF10VI GCNNNNNNNGC 4 cut(s) 451, 1802, 1870, 2833
HpySE526I ACGT 4 cut(s) 241, 551, 787, 829
Hsp92II CATG 9 cut(s) 212, 443, 619, 1438, 1648, 1742, 1873, 2744, 2807
Kpn2I TCCGGA 1 cut(s) 1552
Ksp22I TGATCA 1 cut(s) 609
LmnI GCTCC 4 cut(s) 4, 973, 1948, 2315
Lsp1109I GCAGC 2 cut(s) 1669, 1732
LweI GCATC 7 cut(s) 658, 938, 1327, 1631, 1894, 1930, 2437
MaeI CTAG 5 cut(s) 300, 455, 1635, 2069, 2870
MaeII ACGT 4 cut(s) 241, 551, 787, 829
MaeIII GTNAC 5 cut(s) 319, 394, 851, 1638, 2857
MfeI CAATTG 1 cut(s) 1766
MflI RGATCY 4 cut(s) 304, 1108, 2820, 3142
MhlI GDGCHC 4 cut(s) 9, 250, 896, 970
MlyI GAGTC 5 cut(s) 185, 1034, 1712, 2630, 3064
MmeI TCCRAC 2 cut(s) 885, 995
Mph1103I ATGCAT 2 cut(s) 1603, 1887
MroI TCCGGA 1 cut(s) 1552
MspCI CTTAAG 2 cut(s) 586, 2758
MspI CCGG 4 cut(s) 890, 1553, 2130, 2963
MspR9I CCNGG 3 cut(s) 279, 891, 2131
MunI CAATTG 1 cut(s) 1766
Mva1269I GAATGC 3 cut(s) 786, 1703, 1887
MvaI CCWGG 1 cut(s) 279
MvnI CGCG 3 cut(s) 821, 1104, 1421
MwoI GCNNNNNNNGC 4 cut(s) 451, 1802, 1870, 2833
NciI CCSGG 2 cut(s) 891, 2131
NdeI CATATG 1 cut(s) 2924
NheI GCTAGC 1 cut(s) 454
NlaIII CATG 9 cut(s) 212, 443, 619, 1438, 1648, 1742, 1873, 2744, 2807
NlaIV GGNNCC 1 cut(s) 885
NmuCI GTSAC 1 cut(s) 394
NruI TCGCGA 1 cut(s) 1104
NsiI ATGCAT 2 cut(s) 1603, 1887
NspI RCATGY 4 cut(s) 212, 1742, 1873, 2807
NspV TTCGAA 4 cut(s) 415, 1572, 1827, 2060
PagI TCATGA 2 cut(s) 439, 1434
PceI AGGCCT 1 cut(s) 409
PciI ACATGT 1 cut(s) 2803
PcsI WCGNNNNNNNCGW 3 cut(s) 537, 784, 1101
PctI GAATGC 3 cut(s) 786, 1703, 1887
PfeI GAWTC 6 cut(s) 139, 417, 1493, 2386, 2489, 2969
PkrI GCNGC 3 cut(s) 1423, 1684, 1722
Ple19I CGATCG 1 cut(s) 2631
PleI GAGTC 5 cut(s) 184, 1033, 1711, 2630, 3063
PpsI GAGTC 5 cut(s) 184, 1033, 1711, 2630, 3063
PscI ACATGT 1 cut(s) 2803
PshBI ATTAAT 1 cut(s) 2646
PsiI TTATAA 1 cut(s) 2285
Psp6I CCWGG 1 cut(s) 277
PspGI CCWGG 1 cut(s) 277
PspN4I GGNNCC 1 cut(s) 885
PspPI GGNCC 2 cut(s) 884, 2000
PsrI GAACNNNNNNTAC 2 cut(s) 1859, 1891
PstNI CAGNNNCTG 2 cut(s) 1805, 1864
PsuI RGATCY 4 cut(s) 304, 1108, 2820, 3142
PvuI CGATCG 1 cut(s) 2631
RruI TCGCGA 1 cut(s) 1104
RsaI GTAC 5 cut(s) 693, 1133, 1877, 2808, 2949
RsaNI GTAC 5 cut(s) 692, 1132, 1876, 2807, 2948
SatI GCNGC 3 cut(s) 1422, 1683, 1721
Sau96I GGNCC 2 cut(s) 884, 2000
ScaI AGTACT 1 cut(s) 693
SchI GAGTC 5 cut(s) 185, 1034, 1712, 2630, 3064
ScrFI CCNGG 3 cut(s) 279, 891, 2131
SduI GDGCHC 4 cut(s) 9, 250, 896, 970
SfaNI GCATC 7 cut(s) 658, 938, 1327, 1631, 1894, 1930, 2437
SfcI CTRYAG 1 cut(s) 2247
SfuI TTCGAA 4 cut(s) 415, 1572, 1827, 2060
SinI GGWCC 2 cut(s) 884, 2000
SmlI CTYRAG 7 cut(s) 427, 586, 810, 1127, 2172, 2758, 2931
SmoI CTYRAG 7 cut(s) 427, 586, 810, 1127, 2172, 2758, 2931
SseBI AGGCCT 1 cut(s) 409
SsiI CCGC 2 cut(s) 1379, 1421
SspI AATATT 2 cut(s) 628, 1792
SspMI CTAG 5 cut(s) 300, 455, 1635, 2069, 2870
StuI AGGCCT 1 cut(s) 409
StyD4I CCNGG 3 cut(s) 277, 889, 2129
StyI CCWWGG 1 cut(s) 299
TaiI ACGT 4 cut(s) 244, 554, 790, 832
TaqII GACCGA 1 cut(s) 413
TatI WGTACW 2 cut(s) 691, 2806
TauI GCSGC 1 cut(s) 1424
TfiI GAWTC 6 cut(s) 139, 417, 1493, 2386, 2489, 2969
TscAI CASTG 7 cut(s) 399, 754, 1219, 2238, 2430, 2507, 3037
TseFI GTSAC 1 cut(s) 394
TseI GCWGC 2 cut(s) 1682, 1720
Tsp45I GTSAC 1 cut(s) 394
TspGWI ACGGA 1 cut(s) 1237
TspRI CASTG 7 cut(s) 399, 754, 1219, 2238, 2430, 2507, 3037
Vha464I CTTAAG 2 cut(s) 586, 2758
VneI GTGCAC 1 cut(s) 246
VpaK11BI GGWCC 2 cut(s) 884, 2000
VspI ATTAAT 1 cut(s) 2646
XapI RAATTY 3 cut(s) 802, 2575, 2725
XbaI TCTAGA 1 cut(s) 2869
XceI RCATGY 4 cut(s) 212, 1742, 1873, 2807
XmaJI CCTAGG 1 cut(s) 299
XmiI GTMKAC 2 cut(s) 1300, 2634
XspI CTAG 5 cut(s) 300, 455, 1635, 2069, 2870
ZrmI AGTACT 1 cut(s) 693
Zsp2I ATGCAT 2 cut(s) 1603, 1887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.