Rmu_sc0000546.1_g000015

AAA domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000546.1
Physical Location & Seq
Forward (+)
61892 .. 67895
6004 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000546.1_g000015.1.cds

Sequence Viewer

Length: 2994 bp
atgagtgacttacaggtaactaagattcctgagacgttctcgaccgtaacgagttacatgaaagcatttgttccttcacttcttgaggaaatacatgatgaattacgctcaagcatgatgtccctggcgcaggcgcgaacttgtgaaattctgacagttgaaacttccaaggatcataaacctcccaaagacttgttttaccaaattacatgtgcagaagattacgtaggagcatacgagccagttgttggtgatatcattgccttgacagatgtgagaccaaaatccattgatgatttgaatagatccagaaattcttatcttattgcttatgttattggatcgcaacacggaagttctgataagcttccgatactcgcatcaaagtctatcaataaaggagagtcaggaaacaaaaagattaataaactaggctcaaacacaaatctgtttaagaatattctgcaagtgcaaccaccaaattcatcacatggtcagaatttttgccaaatttgtttttccaatgataaaggctgccctgagctttttactagatggcccacaatgtgttctgatctaaatcattcccaagagtctgcagttttggactgtatcagtttgagcaagtgccatcaccagaatacggtcaagctaatatggggtcctccagggactggaaaaacaaagacaattggtctgtcactatttgctctatttcagttgaagtgtagaacactgacatgcgctcccaccaatattgctatcgtagaactgacagcacggctcctgagattggttagccaccagtcattggattatggcaagtatggacttggagatataattctatttgggaataggatgagattgaagattgataattatgatgaccttcttgagatattccttgatcatcgtgctacaattctgtccacatgtttgaacccattgtctggttggaaacattggctagagtcaatgatagaattgcttgaggatccaaacaaacaatactcattgtatttgcaatcaataaggaaaagacacaattataaacatgaagattctggtgataggagttcagcaagtgatggtgaaaatgataatttgacgtttgagcagtatgtgaatgatagacaggactcaatgtatttgaaaaagagaagggaaaaatacaatgatgatggtaaagacagtgataataggaactcatcaagtgatgatctcattggttttttgacacttgaggagtttgtgaaggagaaacagtattcactgtatttgaaaaagggaaaggaaagatgcgacaatgacggtgaagatagtgataacacaaactcatcaagtgatgatgtaattaatgttttgacgtttgaggagtttatgaaggagaaacagaatgacattggtgagaatctgaagctgtgtatggtaaatttgtacactcacttgccaacttcttgcatttcattaaaggtggtgaattacatgattagagctattaatttgcttgagtcaattaaatcattagtgtgtcagggggttggcattgctagtgaagggtttcaattggtcctgaacaattgtgttcatatactgaggtcacttcgtgcattttctgttccaacttctaatgatggtcagacaataaggaacttgtgtttggaaaatgcttgcttaatattttgtaccgcatcaagctctgcaaatttgcacacggaaggaatgaaaccactggaacttttagtcattgatgaagctgctcagcttaaagaatgtgaatcagcaatccctttacaactacctggtcttcgacatgctattctcataggagatgagaggcaacttcctgctatgaaggttagtattggggtaatatcaccttacaaagcccaagtcaatgcaattgaagagaaagtcaaagaatacagtacggatcatttagctggaactggcttcactccaagtgtgcgatctgttgatggattccaaggtggtgaagaggatgtgataatcatctccactgttagatgtaatgggaatggatcaattggtttcctctcaaatcatcaaagagcaaatgttgtactaacacgtgcaaggcactgtctttggatattggggaatggactgaccttgtctaagagtaactctatttggaagaatctaatcattgatgccaagaatcgcaattgtttttacaatgctgatgaggacaacaacttgtctcaggctattgcatctgcccttgtggatcttgaccaagttcaagttttattcaattctgattctctgctgttcagaaatgcaaaatggaaggtttactttgccaatgaattttacaactccatcgcaaaaattaaagaccccaagattcgtcgggaagtggtttccctactgacaaagctttcaagtggttggcgccaatctcatgaggcgaaactctttggtaggacttcttgtcagctattagagaagtatcaagtcgatgagaacctgaatttgatttggactgtggacattctccaagagaattcacaacatgtacagactatacaagtttgggatattgtgccacattctgaagttccaaatctcacaaaccgtcttgacatcatttttgggagttacacagtggacaaggttaatcgctgcaaacaaagaagtcttgagggggatgatgtagttccaattagatggccggtggaatattcaagcagttgcagtgaatctgatcctctcgagttcctttcaacaccattatcttgtctcactctgagggacgagccagctgaaaattcaactgcatcttatatgagaaataatgcatccaatatgagtggaaaggaggccaccggatcaacaccaaggtgtgcagctctgaaacctcgacagaatgtgctttacatcatcaagaacaatccactcgatgctgaaaacctctgtgccatcatgtctgataaggaaaaatccatcccctggccttcaaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

997

Amino Acids

111.99

Weight (kDa)

5.89

Isoelectric Point (pI)

43.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1053
AccB1I GGYRCC 1 cut(s) 2421
AccB7I CCANNNNNTGG 5 cut(s) 248, 674, 811, 953, 2979
AccII CGCG 1 cut(s) 136
AciI CCGC 1 cut(s) 1692
AcoI YGGCCR 1 cut(s) 2699
AcuI CTGAAG 2 cut(s) 1439, 2604
AcvI CACGTG 1 cut(s) 2096
AcyI GRCGYC 1 cut(s) 2422
AdeI CACNNNGTG 2 cut(s) 567, 1610
AfaI GTAC 5 cut(s) 1442, 1690, 1933, 2088, 2547
AfiI CCNNNNNNNGG 8 cut(s) 130, 248, 643, 674, 793, 811, 953, 2979
AflIII ACRYGT 4 cut(s) 209, 935, 2093, 2542
AhdI GACNNNNNGTC 2 cut(s) 693, 2460
AjnI CCWGG 4 cut(s) 123, 667, 1804, 2978
AjuI GAANNNNNNNTTGG 2 cut(s) 1646, 1678
AleI CACNNNNGTG 1 cut(s) 2869
Alw26I GTCTC 4 cut(s) 26, 271, 2232, 2774
AlwNI CAGNNNCTG 1 cut(s) 674
Ama87I CYCGRG 1 cut(s) 2741
AoxI GGCC 4 cut(s) 557, 2699, 2850, 2981
ApeKI GCWGC 4 cut(s) 534, 1760, 2652, 2876
ArsI GACNNNNNNTTYG 4 cut(s) 1881, 1913, 2603, 2635
AseI ATTAAT 3 cut(s) 423, 1359, 1503
Asp700I GAANNNNTTC 1 cut(s) 1563
AspLEI GCGC 4 cut(s) 130, 136, 746, 2424
AspS9I GGNCC 3 cut(s) 558, 662, 1573
AsuHPI GGTGA 9 cut(s) 263, 626, 1082, 1106, 1328, 1421, 1492, 1872, 2009
AvaI CYCGRG 1 cut(s) 2741
AvaII GGWCC 2 cut(s) 662, 1573
BamHI GGATCC 1 cut(s) 997
BanI GGYRCC 1 cut(s) 2421
BbrPI CACGTG 1 cut(s) 2096
BbsI GAAGAC 1 cut(s) 1802
BbvI GCAGC 4 cut(s) 521, 1747, 2639, 2888
BceAI ACGGC 1 cut(s) 797
BciT130I CCWGG 4 cut(s) 125, 669, 1806, 2980
BclI TGATCA 1 cut(s) 910
BcoDI GTCTC 4 cut(s) 26, 271, 2232, 2774
BfaI CTAG 4 cut(s) 431, 552, 971, 1554
BfmI CTRYAG 1 cut(s) 597
BfoI RGCGCY 1 cut(s) 2425
BisI GCNGC 4 cut(s) 535, 1761, 2653, 2877
BlpI GCTNAGC 1 cut(s) 1764
BlsI GCNGC 4 cut(s) 536, 1762, 2654, 2878
Bme1390I CCNGG 4 cut(s) 125, 669, 1806, 2980
Bme18I GGWCC 2 cut(s) 662, 1573
BmeRI GACNNNNNGTC 2 cut(s) 693, 2460
BmeT110I CYCGRG 1 cut(s) 2741
BmgT120I GGNCC 3 cut(s) 558, 662, 1573
BmiI GGNNCC 4 cut(s) 663, 785, 999, 2423
BmrFI CCNGG 4 cut(s) 125, 669, 1806, 2980
BmsI GCATC 8 cut(s) 389, 1292, 1703, 2167, 2249, 2816, 2837, 2920
BpiI GAAGAC 1 cut(s) 1802
BplI GAGNNNNNCTC 2 cut(s) 23, 55
BpmI CTGGAG 1 cut(s) 651
Bpu10I CCTNAGC 1 cut(s) 540
Bpu1102I GCTNAGC 1 cut(s) 1764
BpuEI CTTGAG 7 cut(s) 94, 104, 917, 1013, 1265, 1532, 2690
BsaAI YACGTR 2 cut(s) 226, 2096
BsaBI GATNNNNATC 2 cut(s) 579, 2015
BsaHI GRCGYC 1 cut(s) 2422
BsaI GGTCTC 1 cut(s) 271
BsaJI CCNNGG 6 cut(s) 123, 168, 668, 1990, 2867, 2978
BsaWI WCCGGW 1 cut(s) 2855
BsaXI ACNNNNNCTCC 4 cut(s) 730, 760, 1253, 1283
Bsc4I CCNNNNNNNGG 8 cut(s) 130, 248, 643, 674, 793, 811, 953, 2979
Bse118I RCCGGY 1 cut(s) 2701
Bse1I ACTGG 5 cut(s) 242, 679, 805, 1740, 1957
Bse3DI GCAATG 2 cut(s) 258, 1548
Bse8I GATNNNNATC 2 cut(s) 579, 2015
BseBI CCWGG 4 cut(s) 125, 669, 1806, 2980
BseDI CCNNGG 6 cut(s) 123, 168, 668, 1990, 2867, 2978
BseGI GGATG 5 cut(s) 867, 2011, 2683, 2828, 2973
BseJI GATNNNNATC 2 cut(s) 579, 2015
BseLI CCNNNNNNNGG 8 cut(s) 130, 248, 643, 674, 793, 811, 953, 2979
BseMI GCAATG 2 cut(s) 258, 1548
BseMII CTCAG 7 cut(s) 21, 531, 779, 1589, 1778, 2243, 2768
BseNI ACTGG 5 cut(s) 242, 679, 805, 1740, 1957
BseRI GAGGAG 2 cut(s) 1262, 1391
BseXI GCAGC 4 cut(s) 521, 1747, 2639, 2888
BsgI GTGCAG 2 cut(s) 234, 2895
Bsh1236I CGCG 1 cut(s) 136
Bsh1285I CGRYCG 1 cut(s) 45
BshFI GGCC 4 cut(s) 559, 2701, 2852, 2983
BshNI GGYRCC 1 cut(s) 2421
BsiEI CGRYCG 1 cut(s) 45
BsiHKCI CYCGRG 1 cut(s) 2741
BsiSI CCGG 2 cut(s) 2702, 2856
BslFI GGGAC 3 cut(s) 106, 685, 2795
BslI CCNNNNNNNGG 8 cut(s) 130, 248, 643, 674, 793, 811, 953, 2979
BsmAI GTCTC 4 cut(s) 26, 271, 2232, 2774
BsmBI CGTCTC 1 cut(s) 26
BsmFI GGGAC 3 cut(s) 106, 685, 2795
BsnI GGCC 4 cut(s) 559, 2701, 2852, 2983
Bso31I GGTCTC 1 cut(s) 271
BsoBI CYCGRG 1 cut(s) 2741
Bsp1407I TGTACA 2 cut(s) 1440, 2545
Bsp1720I GCTNAGC 1 cut(s) 1764
BspACI CCGC 1 cut(s) 1692
BspANI GGCC 4 cut(s) 559, 2701, 2852, 2983
BspCNI CTCAG 7 cut(s) 22, 532, 780, 1590, 1777, 2242, 2769
BspFNI CGCG 1 cut(s) 136
BspHI TCATGA 1 cut(s) 2431
BspLI GGNNCC 4 cut(s) 663, 785, 999, 2423
BspMAI CTGCAG 1 cut(s) 601
BspT107I GGYRCC 1 cut(s) 2421
BspTNI GGTCTC 1 cut(s) 271
BsrDI GCAATG 2 cut(s) 258, 1548
BsrFI RCCGGY 1 cut(s) 2701
BsrGI TGTACA 2 cut(s) 1440, 2545
BsrI ACTGG 5 cut(s) 242, 679, 805, 1740, 1957
BssAI RCCGGY 1 cut(s) 2701
BssECI CCNNGG 6 cut(s) 123, 168, 668, 1990, 2867, 2978
BssNI GRCGYC 1 cut(s) 2422
BssT1I CCWWGG 3 cut(s) 168, 1990, 2867
Bst2UI CCWGG 4 cut(s) 125, 669, 1806, 2980
Bst6I CTCTTC 2 cut(s) 1905, 1995
BstACI GRCGYC 1 cut(s) 2422
BstAUI TGTACA 2 cut(s) 1440, 2545
BstBAI YACGTR 2 cut(s) 226, 2096
BstC8I GCNNGC 3 cut(s) 132, 1675, 2790
BstDEI CTNAG 9 cut(s) 21, 30, 540, 788, 1598, 1764, 2142, 2229, 2777
BstENI CCTNNNNNAGG 1 cut(s) 128
BstF5I GGATG 5 cut(s) 867, 2011, 2683, 2828, 2973
BstFNI CGCG 1 cut(s) 136
BstH2I RGCGCY 1 cut(s) 2425
BstHHI GCGC 4 cut(s) 130, 136, 746, 2424
BstMAI GTCTC 4 cut(s) 26, 271, 2232, 2774
BstMCI CGRYCG 1 cut(s) 45
BstNI CCWGG 4 cut(s) 125, 669, 1806, 2980
BstNSI RCATGY 5 cut(s) 213, 744, 939, 1820, 2546
BstSCI CCNGG 4 cut(s) 123, 667, 1804, 2978
BstSFI CTRYAG 1 cut(s) 597
BstSNI TACGTA 1 cut(s) 226
BstUI CGCG 1 cut(s) 136
BstV1I GCAGC 4 cut(s) 521, 1747, 2639, 2888
BstV2I GAAGAC 1 cut(s) 1802
BstX2I RGATCY 3 cut(s) 305, 997, 2254
BstXI CCANNNNNNTGG 1 cut(s) 2697
BstYI RGATCY 3 cut(s) 305, 997, 2254
BsuRI GGCC 4 cut(s) 559, 2701, 2852, 2983
BtgZI GCGATG 1 cut(s) 2335
BtsCI GGATG 5 cut(s) 867, 2011, 2683, 2828, 2973
BtsI GCAGTG 1 cut(s) 2731
BtsIMutI CAGTG 8 cut(s) 734, 1201, 1274, 1733, 2022, 2104, 2640, 2731
Cac8I GCNNGC 3 cut(s) 132, 1675, 2790
CaiI CAGNNNCTG 1 cut(s) 674
CciI TCATGA 1 cut(s) 2431
CfoI GCGC 4 cut(s) 130, 136, 746, 2424
Cfr10I RCCGGY 1 cut(s) 2701
Cfr13I GGNCC 3 cut(s) 558, 662, 1573
CsiI ACCWGGT 1 cut(s) 1804
Csp6I GTAC 5 cut(s) 1441, 1689, 1932, 2087, 2546
CspCI CAANNNNNGTGG 4 cut(s) 739, 774, 2821, 2856
CviQI GTAC 5 cut(s) 1441, 1689, 1932, 2087, 2546
DdeI CTNAG 9 cut(s) 21, 30, 540, 788, 1598, 1764, 2142, 2229, 2777
DinI GGCGCC 1 cut(s) 2423
DraIII CACNNNGTG 2 cut(s) 567, 1610
DriI GACNNNNNGTC 2 cut(s) 693, 2460
EaeI YGGCCR 1 cut(s) 2699
Eam1104I CTCTTC 2 cut(s) 1905, 1995
Eam1105I GACNNNNNGTC 2 cut(s) 693, 2460
EarI CTCTTC 2 cut(s) 1905, 1995
Eco105I TACGTA 1 cut(s) 226
Eco130I CCWWGG 3 cut(s) 168, 1990, 2867
Eco31I GGTCTC 1 cut(s) 271
Eco32I GATATC 1 cut(s) 256
Eco47I GGWCC 2 cut(s) 662, 1573
Eco57I CTGAAG 2 cut(s) 1439, 2604
Eco72I CACGTG 1 cut(s) 2096
Eco88I CYCGRG 1 cut(s) 2741
EcoNI CCTNNNNNAGG 1 cut(s) 128
EcoO109I RGGNCCY 1 cut(s) 662
EcoRI GAATTC 1 cut(s) 2533
EcoRII CCWGG 4 cut(s) 123, 667, 1804, 2978
EcoRV GATATC 1 cut(s) 256
EcoT14I CCWWGG 3 cut(s) 168, 1990, 2867
EcoT22I ATGCAT 1 cut(s) 2830
EgeI GGCGCC 1 cut(s) 2423
EheI GGCGCC 1 cut(s) 2423
ErhI CCWWGG 3 cut(s) 168, 1990, 2867
Esp3I CGTCTC 1 cut(s) 26
FalI AAGNNNNNCTT 2 cut(s) 2309, 2341
FaqI GGGAC 3 cut(s) 106, 685, 2795
FbaI TGATCA 1 cut(s) 910
Fnu4HI GCNGC 4 cut(s) 535, 1761, 2653, 2877
FokI GGATG 5 cut(s) 874, 2018, 2690, 2815, 2960
Fsp4HI GCNGC 4 cut(s) 535, 1761, 2653, 2877
FspBI CTAG 4 cut(s) 431, 552, 971, 1554
GlaI GCGC 4 cut(s) 129, 135, 745, 2423
GluI GCNGC 4 cut(s) 535, 1761, 2653, 2877
GsuI CTGGAG 1 cut(s) 651
HaeII RGCGCY 1 cut(s) 2425
HaeIII GGCC 4 cut(s) 559, 2701, 2852, 2983
HapII CCGG 2 cut(s) 2702, 2856
HhaI GCGC 4 cut(s) 130, 136, 746, 2424
Hin1I GRCGYC 1 cut(s) 2422
Hin6I GCGC 4 cut(s) 128, 134, 744, 2422
HinP1I GCGC 4 cut(s) 128, 134, 744, 2422
HindIII AAGCTT 2 cut(s) 365, 2405
HpaII CCGG 2 cut(s) 2702, 2856
HphI GGTGA 9 cut(s) 263, 626, 1082, 1106, 1328, 1421, 1492, 1872, 2009
Hpy166II GTNNAC 5 cut(s) 933, 1443, 2323, 2518, 2638
Hpy8I GTNNAC 5 cut(s) 933, 1443, 2323, 2518, 2638
Hpy99I CGWCG 1 cut(s) 2382
HpyCH4IV ACGT 5 cut(s) 35, 225, 1112, 1370, 2095
HpyF3I CTNAG 9 cut(s) 21, 30, 540, 788, 1598, 1764, 2142, 2229, 2777
HpySE526I ACGT 5 cut(s) 35, 225, 1112, 1370, 2095
Hsp92I GRCGYC 1 cut(s) 2422
HspAI GCGC 4 cut(s) 128, 134, 744, 2422
KasI GGCGCC 1 cut(s) 2421
Ksp22I TGATCA 1 cut(s) 910
LmnI GCTCC 3 cut(s) 230, 751, 789
Lsp1109I GCAGC 4 cut(s) 521, 1747, 2639, 2888
LweI GCATC 8 cut(s) 389, 1292, 1703, 2167, 2249, 2816, 2837, 2920
MabI ACCWGGT 1 cut(s) 1804
MaeI CTAG 4 cut(s) 431, 552, 971, 1554
MaeII ACGT 5 cut(s) 35, 225, 1112, 1370, 2095
MaeIII GTNAC 8 cut(s) 5, 16, 46, 53, 699, 1602, 2147, 2627
MboII GAAGA 8 cut(s) 230, 883, 1073, 1331, 1802, 1922, 2012, 2173
MfeI CAATTG 6 cut(s) 690, 1568, 1582, 1905, 2049, 2191
MflI RGATCY 3 cut(s) 305, 997, 2254
Mly113I GGCGCC 1 cut(s) 2422
MlyI GAGTC 5 cut(s) 413, 602, 983, 1136, 1523
MmeI TCCRAC 2 cut(s) 938, 1649
Mph1103I ATGCAT 1 cut(s) 2830
MroXI GAANNNNTTC 1 cut(s) 1563
MslI CAYNNNNRTG 3 cut(s) 739, 1531, 2869
MspA1I CMGCKG 1 cut(s) 2792
MspI CCGG 2 cut(s) 2702, 2856
MspR9I CCNGG 4 cut(s) 125, 669, 1806, 2980
MunI CAATTG 6 cut(s) 690, 1568, 1582, 1905, 2049, 2191
MvaI CCWGG 4 cut(s) 125, 669, 1806, 2980
MvnI CGCG 1 cut(s) 136
NarI GGCGCC 1 cut(s) 2422
NlaIV GGNNCC 4 cut(s) 663, 785, 999, 2423
NmuCI GTSAC 3 cut(s) 5, 699, 1602
NsiI ATGCAT 1 cut(s) 2830
NspI RCATGY 5 cut(s) 213, 744, 939, 1820, 2546
OliI CACNNNNGTG 1 cut(s) 2869
PaeR7I CTCGAG 1 cut(s) 2741
PagI TCATGA 1 cut(s) 2431
PciI ACATGT 3 cut(s) 209, 935, 2542
PcsI WCGNNNNNNNCGW 1 cut(s) 47
PdmI GAANNNNTTC 1 cut(s) 1563
PflFI GACNNNGTC 1 cut(s) 2137
PflMI CCANNNNNTGG 5 cut(s) 248, 674, 811, 953, 2979
PkrI GCNGC 4 cut(s) 536, 1762, 2654, 2878
PleI GAGTC 5 cut(s) 412, 601, 982, 1136, 1522
PluTI GGCGCC 1 cut(s) 2425
PmaCI CACGTG 1 cut(s) 2096
PmlI CACGTG 1 cut(s) 2096
PpsI GAGTC 5 cut(s) 412, 601, 982, 1136, 1522
Ppu21I YACGTR 2 cut(s) 226, 2096
PpuMI RGGWCCY 1 cut(s) 662
PscI ACATGT 3 cut(s) 209, 935, 2542
PshBI ATTAAT 3 cut(s) 423, 1359, 1503
PsiI TTATAA 1 cut(s) 1053
Psp5II RGGWCCY 1 cut(s) 662
Psp6I CCWGG 4 cut(s) 123, 667, 1804, 2978
PspCI CACGTG 1 cut(s) 2096
PspGI CCWGG 4 cut(s) 123, 667, 1804, 2978
PspN4I GGNNCC 4 cut(s) 663, 785, 999, 2423
PspPI GGNCC 3 cut(s) 558, 662, 1573
PspPPI RGGWCCY 1 cut(s) 662
PstI CTGCAG 1 cut(s) 601
PstNI CAGNNNCTG 1 cut(s) 674
PsuI RGATCY 3 cut(s) 305, 997, 2254
PsyI GACNNNGTC 1 cut(s) 2137
PvuII CAGCTG 1 cut(s) 2792
RsaI GTAC 5 cut(s) 1442, 1690, 1933, 2088, 2547
RsaNI GTAC 5 cut(s) 1441, 1689, 1932, 2087, 2546
RseI CAYNNNNRTG 3 cut(s) 739, 1531, 2869
SatI GCNGC 4 cut(s) 535, 1761, 2653, 2877
Sau96I GGNCC 3 cut(s) 558, 662, 1573
SchI GAGTC 5 cut(s) 413, 602, 983, 1136, 1523
ScrFI CCNGG 4 cut(s) 125, 669, 1806, 2980
SexAI ACCWGGT 1 cut(s) 1804
SfaNI GCATC 8 cut(s) 389, 1292, 1703, 2167, 2249, 2816, 2837, 2920
SfcI CTRYAG 1 cut(s) 597
SfoI GGCGCC 1 cut(s) 2423
Sfr274I CTCGAG 1 cut(s) 2741
SinI GGWCC 2 cut(s) 662, 1573
SlaI CTCGAG 1 cut(s) 2741
SmiMI CAYNNNNRTG 3 cut(s) 739, 1531, 2869
SmlI CTYRAG 8 cut(s) 83, 109, 896, 992, 1244, 1511, 2669, 2741
SmoI CTYRAG 8 cut(s) 83, 109, 896, 992, 1244, 1511, 2669, 2741
SnaBI TACGTA 1 cut(s) 226
SsiI CCGC 1 cut(s) 1692
SspDI GGCGCC 1 cut(s) 2421
SspI AATATT 4 cut(s) 460, 757, 1683, 2711
SspMI CTAG 4 cut(s) 431, 552, 971, 1554
StyD4I CCNGG 4 cut(s) 123, 667, 1804, 2978
StyI CCWWGG 3 cut(s) 168, 1990, 2867
TaiI ACGT 5 cut(s) 38, 228, 1115, 1373, 2098
TaqI TCGA 6 cut(s) 41, 1813, 2487, 2742, 2890, 2928
TatI WGTACW 3 cut(s) 1440, 2086, 2545
TscAI CASTG 8 cut(s) 741, 1201, 1281, 1740, 2029, 2111, 2640, 2731
TseFI GTSAC 3 cut(s) 5, 699, 1602
TseI GCWGC 4 cut(s) 534, 1760, 2652, 2876
Tsp45I GTSAC 3 cut(s) 5, 699, 1602
TspGWI ACGGA 3 cut(s) 366, 1733, 1949
TspRI CASTG 8 cut(s) 741, 1201, 1281, 1740, 2029, 2111, 2640, 2731
Tth111I GACNNNGTC 1 cut(s) 2137
Van91I CCANNNNNTGG 5 cut(s) 248, 674, 811, 953, 2979
VpaK11BI GGWCC 2 cut(s) 662, 1573
VspI ATTAAT 3 cut(s) 423, 1359, 1503
XagI CCTNNNNNAGG 1 cut(s) 128
XceI RCATGY 5 cut(s) 213, 744, 939, 1820, 2546
XcmI CCANNNNNNNNNTGG 1 cut(s) 954
XhoI CTCGAG 1 cut(s) 2741
XmnI GAANNNNTTC 1 cut(s) 1563
XspI CTAG 4 cut(s) 431, 552, 971, 1554
Zsp2I ATGCAT 1 cut(s) 2830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.