AT5G37150

AAA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000279
Physical Location & Seq
Forward (+)
14701330 .. 14704562
3233 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37150.1

Sequence Viewer

Length: 2520 bp
ATGGAGCAGAACGAGAAAACAAGTCTGGTCGATAGAGTATTTTCTTGGTCTATCAAAGATATTCTCAATAAAGATTTCTACAAACAAAAGACAGTACCGGACAAGTTTAGATCCGTTGATGAATATTATCAATGTTTTGTTCCTCACCTACTCATTGAAGCACATACCGAGTTGTTCTCAAGCCTCAAATCTGTATCGAAATCTCCTTTTGTTCAAATACGTTCTATGGAGACAAAGACGAAGCAATCAAGTGGAAGCTCATCAAACAAGTTGTTCTATGATATAACATTAAAAGCCACAGAGAGTTTAAGTGCCAAGTACCAGCCAAAATGTGGAGATCTAATTGCTTTGACAATGGATAAGCCAAGACGGATCAATGACTTGAACCCTTTACTTCTTGCCTATGTATTCTCTTCGGATGGTGATCTTAAAATCTCTGTTCATTTGTCTAGATCGATATCACCTCTTGAGAACTATAGCTTCGGTGTTTTCCTAATGACTTTAACAACAAACACTCGAATTTGGAATGCTTTGCACAACGAAGCTGCCATATCGACTCTAACCAAGAGTGTGCTTCAGGCTAATACTGTGAACAATGTTTTTGTTCTGAAAATGATGGGAGATCTGACCTTGTTTTTGGATATAATCCGGTCAACGAAATTGAACTCTTCCCAAGAGGATGCAATCTTGGGCTGCCTTGAGACAAGAAACTGTACCCATAAGAACAGTGTGAAACTGATATGGGGACCTCCTGGAACAGGCAAAACAAAGACGGTCGCGACTCTTCTCTTTGCCCTTCTCAAACTAAGGTGCAAGACAGTTGTGTGTGCTCCTACAAACACAGCTATTGTACAAGTTGCATCGAGGCTCTTATCCTTATTTAAGGAAAATTCGACATCGGAAAATGCTACTTACAGGCTAGGGAATATCATTTTATCAGGAAACCGGGACAGAATGGGGATTCACAAGAACGATCATGTTCTTCTCGATGTGTTTCTTGATGAGCGTATTGGTAAGCTTGGTAAACTGTTTTCACCATTTTCTGGATGGATGCAGAGATTAGAGTCACTGATACAGTTTCTTGAAAACCCGGAGGGTAAGTATGAGAGACATGTCTACGAGTTAGAAGAAGTTGAAAGAATGGAGGAAGAAGCTGAAAGGCAAGAAGTTGTTGTTAACATTCCTACGATTGGAGAATTCGTAAAGAAGAATTTCAATAGCTTAAGTGAAGAAGTGGAGACATGCATCGTTGATTTGTTCACACATCTTCCCAAGGTTTACCTTCCATATGATGATGTGAAGATAATGATTGCTTCTCGTCAATCTCTTCAGCGTATCAGATATTTCTTGCGGGAGAATTCTTCTAGGGTTGATTTCGAGGAAGGAAATTTCAGATTTGATTGCTTCAAAAGACTCAGTGTTGATTGCCTCAAGGCTCTACGCTTACTTCCAAAACGTTTTGAGATTCCAGACATGTTAGAAAACGAAGATATTAGGAAATTTTGTCTTCAAAACGCGGATATTATCCTCTGCACAGCCTCGGGTGCTGCGGAAATGAACGTGGAAAGGACAGGAAATGTAGAACTGCTTGTGGTTGATGAGGCGGCTCAGCTTAAGGAATGTGAATCAGTTGCTGCATTGCAACTTCCGGGACTGCGTCACGCCATTTTAATAGGAGATGAGTTTCAATTGCCTGCAATGGTTCATAATGAGATGTGTGAAAAGGCGAAATTCGGAAGAAGCTTGTTTGAGAGATTGGTTTTGCTTGGTCACAACAAACACTTGCTTGATGTTCAATATCGAATGCATCCTTCTATTAGTCGTTTCCCCAACAAGGAGTTTTATGGTGGGAGAATCAAAGATGCTGAAAATGTTAAAGAAAGCATTTATCAAAAGAGGTTTCTTCAAGGAAACATGTTTGGCTCATTTTCTTTTATCAATGTTGGACGTGGAAAAGAAGAGTTTGGTGATGGACATAGTCCCAAAAACATGGTTGAAGTTGCTGTGGTTTCTGAAATTATATCAAATCTTTTCAAAGTTTCATGTGAAAGGAGGATGAAGGTGAGTGTCGGAGTGGTCTCACCTTACAAAGGACAGATGAGAGCAATCCAAGAGAAAATCGGAGATAAGTACAGTTCCTTATCAGGTCAGCAATTCGCTTTGAATGTTCGGTCCGTAGATGGTTTCCAAGGAGGAGAAGAAGACATTATTATCATCTCCACCGTTAGAAGTAACAGTAATGGAAAAGTGGGGTTTCTCAACAACCGTCAAAGAGCTAACGTGGCACTGACTCGAGCAAGACACTGTTTATGGGTGATTGGGAACGAGACAACTTTGGCTCTAAGTGGTTCGATTTGGGCAACACTGATAAGTGAGTCTAGGACACGTGGATGTTTCTATGATGCTACTGATGAGATGAATCTAAGAAATGCCATGAATGAAGCTTTGCTTGAGGATGTGTCTTCGAGTCTTGGATCTCTTTCGATTAGGAATGGCCATGGAAGAAGAAATGTGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

839

Amino Acids

95.06

Weight (kDa)

8.41

Isoelectric Point (pI)

42.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_11 PF13086 220 - 570 1.3e-31 AAA domain
ResIII PF04851 220 - 301 5.5e-06 Type III restriction enzyme, res subunit
AAA_19 PF13245 240 - 566 1.9e-09 AAA domain
AAA_12 PF13087 579 - 776 1.3e-57 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 332, 1043
AccI GTMKAC 1 cut(s) 1116
AccII CGCG 2 cut(s) 779, 1517
AciI CCGC 4 cut(s) 1351, 1517, 1550, 1604
AclI AACGTT 1 cut(s) 1456
AclWI GGATC 3 cut(s) 105, 380, 2482
AcoI YGGCCR 1 cut(s) 2494
AcsI RAATTY 8 cut(s) 519, 889, 1196, 1210, 1357, 1387, 1499, 1730
AcuI CTGAAG 2 cut(s) 560, 1313
AcvI CACGTG 1 cut(s) 2387
AfaI GTAC 5 cut(s) 96, 320, 715, 852, 2132
AfiI CCNNNNNNNGG 6 cut(s) 332, 758, 1043, 1190, 1834, 2090
AflII CTTAAG 2 cut(s) 1222, 1613
AflIII ACRYGT 4 cut(s) 1111, 1473, 1914, 2384
AjiI CACGTC 1 cut(s) 1949
AjnI CCWGG 1 cut(s) 751
Alw21I GWGCWC 1 cut(s) 832
Alw26I GTCTC 6 cut(s) 224, 695, 1102, 1232, 2083, 2321
AlwI GGATC 3 cut(s) 105, 380, 2482
AlwNI CAGNNNCTG 1 cut(s) 1634
Ama87I CYCGRG 2 cut(s) 1540, 2292
AoxI GGCC 1 cut(s) 2494
ApeKI GCWGC 4 cut(s) 545, 693, 1547, 1634
ApoI RAATTY 8 cut(s) 519, 889, 1196, 1210, 1357, 1387, 1499, 1730
ArsI GACNNNNNNTTYG 2 cut(s) 619, 651
Asp700I GAANNNNTTC 1 cut(s) 1211
AspS9I GGNCC 2 cut(s) 746, 2172
AsuC2I CCSGG 3 cut(s) 947, 1091, 1650
AsuHPI GGTGA 8 cut(s) 137, 434, 453, 1026, 1979, 2073, 2074, 2326
AvaI CYCGRG 2 cut(s) 1540, 2292
AvaII GGWCC 2 cut(s) 746, 2172
BalI TGGCCA 1 cut(s) 2496
BbrPI CACGTG 1 cut(s) 2387
BbsI GAAGAC 3 cut(s) 1499, 2208, 2454
Bbv12I GWGCWC 1 cut(s) 832
BbvI GCAGC 4 cut(s) 532, 680, 1534, 1621
BccI CCATC 5 cut(s) 413, 610, 1041, 1964, 2174
BciT130I CCWGG 1 cut(s) 753
BcnI CCSGG 3 cut(s) 947, 1091, 1650
BcoDI GTCTC 6 cut(s) 224, 695, 1102, 1232, 2083, 2321
BfaI CTAG 4 cut(s) 450, 920, 1365, 2379
BfmI CTRYAG 1 cut(s) 475
BfrI CTTAAG 2 cut(s) 1222, 1613
BglII AGATCT 2 cut(s) 337, 622
BisI GCNGC 5 cut(s) 546, 694, 1548, 1605, 1635
BlpI GCTNAGC 1 cut(s) 1608
BlsI GCNGC 5 cut(s) 547, 695, 1549, 1606, 1636
Bme1390I CCNGG 4 cut(s) 753, 947, 1091, 1650
Bme18I GGWCC 2 cut(s) 746, 2172
BmeT110I CYCGRG 2 cut(s) 1540, 2292
BmgBI CACGTC 1 cut(s) 1949
BmgT120I GGNCC 2 cut(s) 746, 2172
BmiI GGNNCC 1 cut(s) 747
BmrFI CCNGG 4 cut(s) 753, 947, 1091, 1650
BmsI GCATC 7 cut(s) 670, 869, 1041, 1254, 1816, 1852, 2392
BpiI GAAGAC 3 cut(s) 1499, 2208, 2454
BplI GAGNNNNNCTC 2 cut(s) 161, 193
Bpu1102I GCTNAGC 1 cut(s) 1608
BpuEI CTTGAG 5 cut(s) 163, 488, 719, 1415, 2471
BpuMI CCSGG 3 cut(s) 947, 1091, 1650
Bsa29I ATCGAT 1 cut(s) 455
BsaAI YACGTR 1 cut(s) 2387
BsaBI GATNNNNATC 2 cut(s) 423, 457
BsaI GGTCTC 1 cut(s) 2083
BsaJI CCNNGG 4 cut(s) 1272, 1539, 2188, 2497
BsaWI WCCGGW 2 cut(s) 97, 648
BsaXI ACNNNNNCTCC 4 cut(s) 1085, 1115, 1185, 1215
Bsc4I CCNNNNNNNGG 6 cut(s) 332, 758, 1043, 1190, 1834, 2090
Bse3DI GCAATG 2 cut(s) 1637, 1704
Bse8I GATNNNNATC 2 cut(s) 423, 457
BseBI CCWGG 1 cut(s) 753
BseCI ATCGAT 1 cut(s) 455
BseDI CCNNGG 4 cut(s) 1272, 1539, 2188, 2497
BseGI GGATG 8 cut(s) 424, 685, 1052, 1056, 1807, 2061, 2396, 2461
BseJI GATNNNNATC 2 cut(s) 423, 457
BseLI CCNNNNNNNGG 6 cut(s) 332, 758, 1043, 1190, 1834, 2090
BseMI GCAATG 2 cut(s) 1637, 1704
BseMII CTCAG 2 cut(s) 1429, 1622
BseRI GAGGAG 1 cut(s) 2208
BseXI GCAGC 4 cut(s) 532, 680, 1534, 1621
BsgI GTGCAG 1 cut(s) 1516
Bsh1236I CGCG 2 cut(s) 779, 1517
Bsh1285I CGRYCG 1 cut(s) 777
BshFI GGCC 1 cut(s) 2496
BshVI ATCGAT 1 cut(s) 455
BsiEI CGRYCG 1 cut(s) 777
BsiHKAI GWGCWC 1 cut(s) 832
BsiHKCI CYCGRG 2 cut(s) 1540, 2292
BsiSI CCGG 5 cut(s) 98, 649, 946, 1091, 1649
BslFI GGGAC 4 cut(s) 759, 962, 1665, 1965
BslI CCNNNNNNNGG 6 cut(s) 332, 758, 1043, 1190, 1834, 2090
BsmAI GTCTC 6 cut(s) 224, 695, 1102, 1232, 2083, 2321
BsmFI GGGAC 4 cut(s) 759, 962, 1665, 1965
BsmI GAATGC 2 cut(s) 532, 1809
BsnI GGCC 1 cut(s) 2496
Bso31I GGTCTC 1 cut(s) 2083
BsoBI CYCGRG 2 cut(s) 1540, 2292
Bsp1286I GDGCHC 1 cut(s) 832
Bsp1407I TGTACA 1 cut(s) 850
Bsp143I GATC 8 cut(s) 110, 337, 372, 424, 452, 622, 973, 2474
Bsp1720I GCTNAGC 1 cut(s) 1608
Bsp19I CCATGG 1 cut(s) 2497
Bsp68I TCGCGA 1 cut(s) 779
BspACI CCGC 4 cut(s) 1351, 1517, 1550, 1604
BspANI GGCC 1 cut(s) 2496
BspCNI CTCAG 2 cut(s) 1428, 1621
BspDI ATCGAT 1 cut(s) 455
BspFNI CGCG 2 cut(s) 779, 1517
BspLI GGNNCC 1 cut(s) 747
BspPI GGATC 3 cut(s) 105, 380, 2482
BspTI CTTAAG 2 cut(s) 1222, 1613
BspTNI GGTCTC 1 cut(s) 2083
BsrDI GCAATG 2 cut(s) 1637, 1704
BsrGI TGTACA 1 cut(s) 850
BssECI CCNNGG 4 cut(s) 1272, 1539, 2188, 2497
BssMI GATC 8 cut(s) 110, 337, 372, 424, 452, 622, 973, 2474
BssT1I CCWWGG 3 cut(s) 1272, 2188, 2497
Bst2UI CCWGG 1 cut(s) 753
Bst6I CTCTTC 5 cut(s) 418, 673, 789, 1332, 1953
BstAFI CTTAAG 2 cut(s) 1222, 1613
BstAUI TGTACA 1 cut(s) 850
BstBAI YACGTR 1 cut(s) 2387
BstC8I GCNNGC 1 cut(s) 1695
BstDEI CTNAG 5 cut(s) 806, 1415, 1608, 2342, 2423
BstDSI CCRYGG 1 cut(s) 2497
BstENI CCTNNNNNAGG 2 cut(s) 756, 2088
BstF5I GGATG 8 cut(s) 424, 685, 1052, 1056, 1807, 2061, 2396, 2461
BstFNI CGCG 2 cut(s) 779, 1517
BstKTI GATC 8 cut(s) 113, 340, 375, 427, 455, 625, 976, 2477
BstMAI GTCTC 6 cut(s) 224, 695, 1102, 1232, 2083, 2321
BstMBI GATC 8 cut(s) 110, 337, 372, 424, 452, 622, 973, 2474
BstMCI CGRYCG 1 cut(s) 777
BstMWI GCNNNNNNNGC 2 cut(s) 1544, 2282
BstNI CCWGG 1 cut(s) 753
BstNSI RCATGY 4 cut(s) 1115, 1245, 1477, 1918
BstSCI CCNGG 4 cut(s) 751, 945, 1089, 1648
BstSFI CTRYAG 1 cut(s) 475
BstUI CGCG 2 cut(s) 779, 1517
BstV1I GCAGC 4 cut(s) 532, 680, 1534, 1621
BstV2I GAAGAC 3 cut(s) 1499, 2208, 2454
BstX2I RGATCY 4 cut(s) 110, 337, 622, 2474
BstXI CCANNNNNNTGG 1 cut(s) 1990
BstYI RGATCY 4 cut(s) 110, 337, 622, 2474
Bsu15I ATCGAT 1 cut(s) 455
BsuRI GGCC 1 cut(s) 2496
BsuTUI ATCGAT 1 cut(s) 455
BtgI CCRYGG 1 cut(s) 2497
BtrI CACGTC 1 cut(s) 1949
BtsCI GGATG 8 cut(s) 424, 685, 1052, 1056, 1807, 2061, 2396, 2461
BtsIMutI CAGTG 6 cut(s) 733, 1067, 1423, 2285, 2302, 2363
BtuMI TCGCGA 1 cut(s) 779
Cac8I GCNNGC 1 cut(s) 1695
CaiI CAGNNNCTG 1 cut(s) 1634
Cfr13I GGNCC 2 cut(s) 746, 2172
ClaI ATCGAT 1 cut(s) 455
CpoI CGGWCCG 1 cut(s) 2172
CseI GACGC 1 cut(s) 1646
Csp6I GTAC 5 cut(s) 95, 319, 714, 851, 2131
CspI CGGWCCG 1 cut(s) 2172
CviAII CATG 9 cut(s) 977, 1112, 1242, 1474, 1915, 1990, 2043, 2434, 2498
CviQI GTAC 5 cut(s) 95, 319, 714, 851, 2131
DdeI CTNAG 5 cut(s) 806, 1415, 1608, 2342, 2423
DpnI GATC 8 cut(s) 112, 339, 374, 426, 454, 624, 975, 2476
DpnII GATC 8 cut(s) 110, 337, 372, 424, 452, 622, 973, 2474
EaeI YGGCCR 1 cut(s) 2494
Eam1104I CTCTTC 5 cut(s) 418, 673, 789, 1332, 1953
EarI CTCTTC 5 cut(s) 418, 673, 789, 1332, 1953
Eco130I CCWWGG 3 cut(s) 1272, 2188, 2497
Eco31I GGTCTC 1 cut(s) 2083
Eco32I GATATC 1 cut(s) 459
Eco47I GGWCC 2 cut(s) 746, 2172
Eco57I CTGAAG 2 cut(s) 560, 1313
Eco72I CACGTG 1 cut(s) 2387
Eco88I CYCGRG 2 cut(s) 1540, 2292
EcoNI CCTNNNNNAGG 2 cut(s) 756, 2088
EcoO109I RGGNCCY 1 cut(s) 746
EcoRI GAATTC 2 cut(s) 1196, 1357
EcoRII CCWGG 1 cut(s) 751
EcoRV GATATC 1 cut(s) 459
EcoT14I CCWWGG 3 cut(s) 1272, 2188, 2497
EcoT22I ATGCAT 2 cut(s) 1247, 1809
ErhI CCWWGG 3 cut(s) 1272, 2188, 2497
FaeI CATG 9 cut(s) 980, 1115, 1245, 1477, 1918, 1993, 2046, 2437, 2501
FalI AAGNNNNNCTT 2 cut(s) 2433, 2465
FaqI GGGAC 4 cut(s) 759, 962, 1665, 1965
FatI CATG 9 cut(s) 976, 1111, 1241, 1473, 1914, 1989, 2042, 2433, 2497
FauI CCCGC 1 cut(s) 1344
FauNDI CATATG 1 cut(s) 1288
FblI GTMKAC 1 cut(s) 1116
Fnu4HI GCNGC 5 cut(s) 546, 694, 1548, 1605, 1635
FokI GGATG 8 cut(s) 431, 692, 1059, 1063, 1794, 2068, 2403, 2468
Fsp4HI GCNGC 5 cut(s) 546, 694, 1548, 1605, 1635
FspBI CTAG 4 cut(s) 450, 920, 1365, 2379
GluI GCNGC 5 cut(s) 546, 694, 1548, 1605, 1635
HaeIII GGCC 1 cut(s) 2496
HapII CCGG 5 cut(s) 98, 649, 946, 1091, 1649
HgaI GACGC 1 cut(s) 1646
Hin1II CATG 9 cut(s) 980, 1115, 1245, 1477, 1918, 1993, 2046, 2437, 2501
HincII GTYRAC 2 cut(s) 654, 1177
HindII GTYRAC 2 cut(s) 654, 1177
HindIII AAGCTT 3 cut(s) 1016, 1741, 2442
HpaI GTTAAC 1 cut(s) 1177
HpaII CCGG 5 cut(s) 98, 649, 946, 1091, 1649
HphI GGTGA 8 cut(s) 137, 434, 453, 1026, 1979, 2073, 2074, 2326
Hpy166II GTNNAC 7 cut(s) 592, 654, 1025, 1117, 1177, 1260, 1279
Hpy188III TCNNGA 9 cut(s) 450, 467, 778, 939, 986, 998, 1044, 1082, 1469
Hpy8I GTNNAC 7 cut(s) 592, 654, 1025, 1117, 1177, 1260, 1279
HpyAV CCTTC 5 cut(s) 806, 1292, 1376, 1821, 2053
HpyCH4IV ACGT 6 cut(s) 220, 1456, 1560, 1948, 2280, 2386
HpyF10VI GCNNNNNNNGC 2 cut(s) 1544, 2282
HpyF3I CTNAG 5 cut(s) 806, 1415, 1608, 2342, 2423
HpySE526I ACGT 6 cut(s) 220, 1456, 1560, 1948, 2280, 2386
Hsp92II CATG 9 cut(s) 980, 1115, 1245, 1477, 1918, 1993, 2046, 2437, 2501
KspAI GTTAAC 1 cut(s) 1177
Kzo9I GATC 8 cut(s) 110, 337, 372, 424, 452, 622, 973, 2474
LmnI GCTCC 2 cut(s) 4, 835
Lsp1109I GCAGC 4 cut(s) 532, 680, 1534, 1621
LweI GCATC 7 cut(s) 670, 869, 1041, 1254, 1816, 1852, 2392
MaeI CTAG 4 cut(s) 450, 920, 1365, 2379
MaeII ACGT 6 cut(s) 220, 1456, 1560, 1948, 2280, 2386
MaeIII GTNAC 4 cut(s) 1065, 1658, 1769, 2231
MalI GATC 8 cut(s) 112, 339, 374, 426, 454, 624, 975, 2476
MboI GATC 8 cut(s) 110, 337, 372, 424, 452, 622, 973, 2474
MfeI CAATTG 1 cut(s) 1688
MflI RGATCY 4 cut(s) 110, 337, 622, 2474
MhlI GDGCHC 1 cut(s) 832
MlsI TGGCCA 1 cut(s) 2496
MluNI TGGCCA 1 cut(s) 2496
MlyI GAGTC 7 cut(s) 550, 775, 1073, 1407, 2284, 2384, 2476
MmeI TCCRAC 2 cut(s) 1924, 2050
Mox20I TGGCCA 1 cut(s) 2496
Mph1103I ATGCAT 2 cut(s) 1247, 1809
MroXI GAANNNNTTC 1 cut(s) 1211
MscI TGGCCA 1 cut(s) 2496
MslI CAYNNNNRTG 1 cut(s) 2389
Msp20I TGGCCA 1 cut(s) 2496
MspCI CTTAAG 2 cut(s) 1222, 1613
MspI CCGG 5 cut(s) 98, 649, 946, 1091, 1649
MspR9I CCNGG 4 cut(s) 753, 947, 1091, 1650
MunI CAATTG 1 cut(s) 1688
Mva1269I GAATGC 2 cut(s) 532, 1809
MvaI CCWGG 1 cut(s) 753
MvnI CGCG 2 cut(s) 779, 1517
MwoI GCNNNNNNNGC 2 cut(s) 1544, 2282
NciI CCSGG 3 cut(s) 947, 1091, 1650
NcoI CCATGG 1 cut(s) 2497
NdeI CATATG 1 cut(s) 1288
NdeII GATC 8 cut(s) 110, 337, 372, 424, 452, 622, 973, 2474
NlaIII CATG 9 cut(s) 980, 1115, 1245, 1477, 1918, 1993, 2046, 2437, 2501
NlaIV GGNNCC 1 cut(s) 747
NmuCI GTSAC 3 cut(s) 1065, 1658, 1769
NruI TCGCGA 1 cut(s) 779
NsiI ATGCAT 2 cut(s) 1247, 1809
NspI RCATGY 4 cut(s) 1115, 1245, 1477, 1918
PaeR7I CTCGAG 1 cut(s) 2292
PciI ACATGT 3 cut(s) 1111, 1473, 1914
PctI GAATGC 2 cut(s) 532, 1809
PdmI GAANNNNTTC 1 cut(s) 1211
PfeI GAWTC 5 cut(s) 961, 1465, 1625, 1854, 2419
PflFI GACNNNGTC 2 cut(s) 1656, 1977
PflMI CCANNNNNTGG 2 cut(s) 332, 1043
PfoI TCCNGGA 2 cut(s) 751, 1648
PkrI GCNGC 5 cut(s) 547, 695, 1549, 1606, 1636
PleI GAGTC 7 cut(s) 550, 775, 1072, 1407, 2284, 2383, 2475
PmaCI CACGTG 1 cut(s) 2387
PmlI CACGTG 1 cut(s) 2387
PpsI GAGTC 7 cut(s) 550, 775, 1072, 1407, 2284, 2383, 2475
Ppu21I YACGTR 1 cut(s) 2387
PpuMI RGGWCCY 1 cut(s) 746
PscI ACATGT 3 cut(s) 1111, 1473, 1914
Psp1406I AACGTT 1 cut(s) 1456
Psp5II RGGWCCY 1 cut(s) 746
Psp6I CCWGG 1 cut(s) 751
PspCI CACGTG 1 cut(s) 2387
PspGI CCWGG 1 cut(s) 751
PspN4I GGNNCC 1 cut(s) 747
PspPI GGNCC 2 cut(s) 746, 2172
PspPPI RGGWCCY 1 cut(s) 746
PspXI VCTCGAGB 1 cut(s) 2292
PstNI CAGNNNCTG 1 cut(s) 1634
PsuI RGATCY 4 cut(s) 110, 337, 622, 2474
PsyI GACNNNGTC 2 cut(s) 1656, 1977
RruI TCGCGA 1 cut(s) 779
RsaI GTAC 5 cut(s) 96, 320, 715, 852, 2132
RsaNI GTAC 5 cut(s) 95, 319, 714, 851, 2131
RseI CAYNNNNRTG 1 cut(s) 2389
Rsr2I CGGWCCG 1 cut(s) 2172
RsrII CGGWCCG 1 cut(s) 2172
SatI GCNGC 5 cut(s) 546, 694, 1548, 1605, 1635
Sau3AI GATC 8 cut(s) 110, 337, 372, 424, 452, 622, 973, 2474
Sau96I GGNCC 2 cut(s) 746, 2172
SchI GAGTC 7 cut(s) 550, 775, 1073, 1407, 2284, 2384, 2476
ScrFI CCNGG 4 cut(s) 753, 947, 1091, 1650
SduI GDGCHC 1 cut(s) 832
SfaNI GCATC 7 cut(s) 670, 869, 1041, 1254, 1816, 1852, 2392
SfcI CTRYAG 1 cut(s) 475
Sfr274I CTCGAG 1 cut(s) 2292
SinI GGWCC 2 cut(s) 746, 2172
SlaI CTCGAG 1 cut(s) 2292
SmiMI CAYNNNNRTG 1 cut(s) 2389
SmlI CTYRAG 8 cut(s) 178, 467, 698, 1222, 1430, 1613, 2292, 2450
SmoI CTYRAG 8 cut(s) 178, 467, 698, 1222, 1430, 1613, 2292, 2450
SsiI CCGC 4 cut(s) 1351, 1517, 1550, 1604
SspI AATATT 1 cut(s) 125
SspMI CTAG 4 cut(s) 450, 920, 1365, 2379
StyD4I CCNGG 4 cut(s) 751, 945, 1089, 1648
StyI CCWWGG 3 cut(s) 1272, 2188, 2497
TaiI ACGT 6 cut(s) 223, 1459, 1563, 1951, 2283, 2389
TaqII GACCGA 1 cut(s) 2160
TatI WGTACW 2 cut(s) 850, 2130
TauI GCSGC 1 cut(s) 1607
TfiI GAWTC 5 cut(s) 961, 1465, 1625, 1854, 2419
TscAI CASTG 6 cut(s) 733, 1074, 1423, 2292, 2309, 2370
TseFI GTSAC 3 cut(s) 1065, 1658, 1769
TseI GCWGC 4 cut(s) 545, 693, 1547, 1634
Tsp45I GTSAC 3 cut(s) 1065, 1658, 1769
TspDTI ATGAA 9 cut(s) 135, 431, 1571, 1694, 2031, 2072, 2432, 2450, 2454
TspGWI ACGGA 3 cut(s) 103, 385, 2164
TspRI CASTG 6 cut(s) 733, 1074, 1423, 2292, 2309, 2370
Tth111I GACNNNGTC 2 cut(s) 1656, 1977
Van91I CCANNNNNTGG 2 cut(s) 332, 1043
Vha464I CTTAAG 2 cut(s) 1222, 1613
VpaK11BI GGWCC 2 cut(s) 746, 2172
XagI CCTNNNNNAGG 2 cut(s) 756, 2088
XapI RAATTY 8 cut(s) 519, 889, 1196, 1210, 1357, 1387, 1499, 1730
XbaI TCTAGA 1 cut(s) 449
XceI RCATGY 4 cut(s) 1115, 1245, 1477, 1918
XcmI CCANNNNNNNNNTGG 2 cut(s) 329, 1044
XhoI CTCGAG 1 cut(s) 2292
XmiI GTMKAC 1 cut(s) 1116
XmnI GAANNNNTTC 1 cut(s) 1211
XspI CTAG 4 cut(s) 450, 920, 1365, 2379
Zsp2I ATGCAT 2 cut(s) 1247, 1809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.