AAA domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 170 - 252 | 5.4e-06 | Plant transposase (Ptta/En/Spm family) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 536 |
| AclWI | GGATC | 1 cut(s) | 589 |
| AcsI | RAATTY | 2 cut(s) | 188, 381 |
| AfaI | GTAC | 2 cut(s) | 437, 596 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 577 |
| AflII | CTTAAG | 1 cut(s) | 220 |
| AflIII | ACRYGT | 1 cut(s) | 708 |
| AgsI | TTSAA | 6 cut(s) | 493, 559, 635, 807, 881, 896 |
| AjiI | CACGTC | 1 cut(s) | 709 |
| AluBI | AGCT | 4 cut(s) | 26, 620, 656, 968 |
| AluI | AGCT | 4 cut(s) | 26, 620, 656, 968 |
| Alw26I | GTCTC | 1 cut(s) | 456 |
| AlwI | GGATC | 1 cut(s) | 589 |
| AoxI | GGCC | 1 cut(s) | 66 |
| ApeKI | GCWGC | 1 cut(s) | 830 |
| ApoI | RAATTY | 2 cut(s) | 188, 381 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 1 cut(s) | 53 |
| AsuII | TTCGAA | 1 cut(s) | 441 |
| BbvI | GCAGC | 1 cut(s) | 817 |
| BccI | CCATC | 3 cut(s) | 865, 979, 1009 |
| BceAI | ACGGC | 1 cut(s) | 441 |
| BclI | TGATCA | 2 cut(s) | 54, 970 |
| BcoDI | GTCTC | 1 cut(s) | 456 |
| BfaI | CTAG | 1 cut(s) | 396 |
| BfmI | CTRYAG | 1 cut(s) | 977 |
| BfrI | CTTAAG | 1 cut(s) | 220 |
| BisI | GCNGC | 1 cut(s) | 831 |
| BlsI | GCNGC | 1 cut(s) | 832 |
| BmgBI | CACGTC | 1 cut(s) | 709 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 3 cut(s) | 69, 145, 731 |
| BmsI | GCATC | 3 cut(s) | 205, 520, 617 |
| Bpu14I | TTCGAA | 1 cut(s) | 441 |
| BsaJI | CCNNGG | 2 cut(s) | 147, 1025 |
| BsaWI | WCCGGW | 1 cut(s) | 287 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 577 |
| BseDI | CCNNGG | 2 cut(s) | 147, 1025 |
| BseGI | GGATG | 4 cut(s) | 220, 274, 454, 535 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 577 |
| BseMII | CTCAG | 1 cut(s) | 915 |
| BseRI | GAGGAG | 2 cut(s) | 146, 739 |
| BseXI | GCAGC | 1 cut(s) | 817 |
| BseYI | CCCAGC | 1 cut(s) | 507 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BsiSI | CCGG | 1 cut(s) | 288 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 577 |
| BsmAI | GTCTC | 1 cut(s) | 456 |
| BsnI | GGCC | 1 cut(s) | 68 |
| Bsp119I | TTCGAA | 1 cut(s) | 441 |
| Bsp143I | GATC | 4 cut(s) | 54, 474, 581, 970 |
| BspACI | CCGC | 1 cut(s) | 536 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BspCNI | CTCAG | 1 cut(s) | 916 |
| BspLI | GGNNCC | 3 cut(s) | 69, 145, 731 |
| BspPI | GGATC | 1 cut(s) | 589 |
| BspT104I | TTCGAA | 1 cut(s) | 441 |
| BspTI | CTTAAG | 1 cut(s) | 220 |
| BssECI | CCNNGG | 2 cut(s) | 147, 1025 |
| BssMI | GATC | 4 cut(s) | 54, 474, 581, 970 |
| BssT1I | CCWWGG | 2 cut(s) | 147, 1025 |
| Bst4CI | ACNGT | 5 cut(s) | 76, 392, 435, 469, 545 |
| BstAFI | CTTAAG | 1 cut(s) | 220 |
| BstBI | TTCGAA | 1 cut(s) | 441 |
| BstDEI | CTNAG | 3 cut(s) | 681, 824, 924 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 575 |
| BstF5I | GGATG | 4 cut(s) | 220, 274, 454, 535 |
| BstKTI | GATC | 4 cut(s) | 57, 477, 584, 973 |
| BstMAI | GTCTC | 1 cut(s) | 456 |
| BstMBI | GATC | 4 cut(s) | 54, 474, 581, 970 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 653 |
| BstSFI | CTRYAG | 1 cut(s) | 977 |
| BstV1I | GCAGC | 1 cut(s) | 817 |
| BstX2I | RGATCY | 1 cut(s) | 581 |
| BstYI | RGATCY | 1 cut(s) | 581 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| BtrI | CACGTC | 1 cut(s) | 709 |
| BtsCI | GGATG | 4 cut(s) | 220, 274, 454, 535 |
| BtsIMutI | CAGTG | 1 cut(s) | 431 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| Csp6I | GTAC | 2 cut(s) | 436, 595 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 795, 830 |
| CviAII | CATG | 2 cut(s) | 994, 1032 |
| CviQI | GTAC | 2 cut(s) | 436, 595 |
| DdeI | CTNAG | 3 cut(s) | 681, 824, 924 |
| DpnI | GATC | 4 cut(s) | 56, 476, 583, 972 |
| DpnII | GATC | 4 cut(s) | 54, 474, 581, 970 |
| DraI | TTTAAA | 2 cut(s) | 127, 193 |
| Eco130I | CCWWGG | 2 cut(s) | 147, 1025 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 575 |
| EcoT14I | CCWWGG | 2 cut(s) | 147, 1025 |
| EcoT22I | ATGCAT | 1 cut(s) | 378 |
| ErhI | CCWWGG | 2 cut(s) | 147, 1025 |
| FaeI | CATG | 2 cut(s) | 997, 1035 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 283, 315, 609, 641 |
| FatI | CATG | 2 cut(s) | 993, 1031 |
| FbaI | TGATCA | 2 cut(s) | 54, 970 |
| Fnu4HI | GCNGC | 1 cut(s) | 831 |
| FokI | GGATG | 4 cut(s) | 227, 281, 441, 542 |
| Fsp4HI | GCNGC | 1 cut(s) | 831 |
| FspBI | CTAG | 1 cut(s) | 396 |
| GluI | GCNGC | 1 cut(s) | 831 |
| GsaI | CCCAGC | 1 cut(s) | 511 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| HapII | CCGG | 1 cut(s) | 288 |
| Hin1II | CATG | 2 cut(s) | 997, 1035 |
| HinfI | GANTC | 3 cut(s) | 503, 555, 896 |
| HpaII | CCGG | 1 cut(s) | 288 |
| HphI | GGTGA | 1 cut(s) | 53 |
| Hpy188I | TCNGA | 1 cut(s) | 486 |
| Hpy188III | TCNNGA | 1 cut(s) | 559 |
| HpyAV | CCTTC | 1 cut(s) | 571 |
| HpyCH4III | ACNGT | 5 cut(s) | 76, 392, 435, 469, 545 |
| HpyCH4IV | ACGT | 2 cut(s) | 708, 940 |
| HpyCH4V | TGCA | 5 cut(s) | 376, 533, 860, 902, 1006 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 653 |
| HpyF3I | CTNAG | 3 cut(s) | 681, 824, 924 |
| HpySE526I | ACGT | 2 cut(s) | 708, 940 |
| Hsp92II | CATG | 2 cut(s) | 997, 1035 |
| Ksp22I | TGATCA | 2 cut(s) | 54, 970 |
| Kzo9I | GATC | 4 cut(s) | 54, 474, 581, 970 |
| LmnI | GCTCC | 2 cut(s) | 143, 172 |
| LpnPI | CCDG | 4 cut(s) | 24, 266, 301, 521 |
| Lsp1109I | GCAGC | 1 cut(s) | 817 |
| LweI | GCATC | 3 cut(s) | 205, 520, 617 |
| MaeI | CTAG | 1 cut(s) | 396 |
| MaeII | ACGT | 2 cut(s) | 708, 940 |
| MaeIII | GTNAC | 1 cut(s) | 41 |
| MalI | GATC | 4 cut(s) | 56, 476, 583, 972 |
| MboI | GATC | 4 cut(s) | 54, 474, 581, 970 |
| MboII | GAAGA | 2 cut(s) | 484, 704 |
| MflI | RGATCY | 1 cut(s) | 581 |
| MluCI | AATT | 6 cut(s) | 15, 50, 95, 188, 381, 891 |
| MmeI | TCCRAC | 1 cut(s) | 933 |
| Mph1103I | ATGCAT | 1 cut(s) | 378 |
| MseI | TTAA | 5 cut(s) | 108, 126, 192, 221, 365 |
| MspCI | CTTAAG | 1 cut(s) | 220 |
| MspI | CCGG | 1 cut(s) | 288 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 653 |
| NdeII | GATC | 4 cut(s) | 54, 474, 581, 970 |
| NlaIII | CATG | 2 cut(s) | 997, 1035 |
| NlaIV | GGNNCC | 3 cut(s) | 69, 145, 731 |
| NmuCI | GTSAC | 1 cut(s) | 41 |
| NsiI | ATGCAT | 1 cut(s) | 378 |
| NspV | TTCGAA | 1 cut(s) | 441 |
| PfeI | GAWTC | 3 cut(s) | 503, 555, 896 |
| PkrI | GCNGC | 1 cut(s) | 832 |
| PspFI | CCCAGC | 1 cut(s) | 507 |
| PspN4I | GGNNCC | 3 cut(s) | 69, 145, 731 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| PsuI | RGATCY | 1 cut(s) | 581 |
| RsaI | GTAC | 2 cut(s) | 437, 596 |
| RsaNI | GTAC | 2 cut(s) | 436, 595 |
| SaqAI | TTAA | 5 cut(s) | 108, 126, 192, 221, 365 |
| SatI | GCNGC | 1 cut(s) | 831 |
| Sau3AI | GATC | 4 cut(s) | 54, 474, 581, 970 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SfaNI | GCATC | 3 cut(s) | 205, 520, 617 |
| SfcI | CTRYAG | 1 cut(s) | 977 |
| SfuI | TTCGAA | 1 cut(s) | 441 |
| SmlI | CTYRAG | 1 cut(s) | 220 |
| SmoI | CTYRAG | 1 cut(s) | 220 |
| Sse9I | AATT | 6 cut(s) | 15, 50, 95, 188, 381, 891 |
| SsiI | CCGC | 1 cut(s) | 536 |
| SspMI | CTAG | 1 cut(s) | 396 |
| StyI | CCWWGG | 2 cut(s) | 147, 1025 |
| TaaI | ACNGT | 5 cut(s) | 76, 392, 435, 469, 545 |
| TaiI | ACGT | 2 cut(s) | 711, 943 |
| TaqI | TCGA | 1 cut(s) | 441 |
| TasI | AATT | 6 cut(s) | 15, 50, 95, 188, 381, 891 |
| TatI | WGTACW | 2 cut(s) | 435, 594 |
| TfiI | GAWTC | 3 cut(s) | 503, 555, 896 |
| Tru1I | TTAA | 5 cut(s) | 108, 126, 192, 221, 365 |
| Tru9I | TTAA | 5 cut(s) | 108, 126, 192, 221, 365 |
| TscAI | CASTG | 1 cut(s) | 438 |
| TseFI | GTSAC | 1 cut(s) | 41 |
| TseI | GCWGC | 1 cut(s) | 830 |
| Tsp45I | GTSAC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 7 cut(s) | 27, 68, 329, 416, 618, 930, 1010 |
| TspRI | CASTG | 1 cut(s) | 438 |
| Vha464I | CTTAAG | 1 cut(s) | 220 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 575 |
| XapI | RAATTY | 2 cut(s) | 188, 381 |
| XspI | CTAG | 1 cut(s) | 396 |
| Zsp2I | ATGCAT | 1 cut(s) | 378 |