Rh3BG323100

AAA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000279
Physical Location & Seq
Forward (+)
33346878 .. 33357638
10761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG323100.1

Sequence Viewer

Length: 1656 bp
ATGCCCATGATTATGGTGCAGAGGATCCCCGAGACATTTGTGTCATTGACGAGTTACAAGAAATCATTCATTCCTTCACTTGTTGAGGAAACTCATGCTGATTTACTATCAAATATGAAGACTCTGTCACATGCACCTACTTGTGAAATTTTGACAATCGTAGATTCAGCTGAACATCCTGGTGACTTGTTTTACGATATAATGTATAAGAGAGATATAGAAACTGATGAGAATCACAAAGGACCGATGTATGAGCCACAGGTTGGAGATATCATTGCCTTGACAAATGTTAGACCAAAATGCATTGATGATTTGAACAGGCCTCCAAGATTCTATCTAATCGCTTATGTTGATAAAGCAAATGATATTGATGAATTTCCTGATGATCTCCAGTTCAAAATACTATCATCGAAGCCCATCAACTATGGAGAATCAGACATGCATAAGAGCAAGAGAGAAACACTTTTTGCTCTCTATCTTATGAACTTGACAACAAATCTCCGTGTATGGAAGGCTTTGAACTCAGAAGAGGGAAATACAAATATCCTTAGCAAAGTTCTGCAACCCAAGTCAGATGTTTGCTTCACTCATGACTTTTTGAACTCCATAACAAAAATTAAAGACACTGTGATTCTTTGGGATGTGCTGGCGTTATTAACCAAGCTTTCGAGTGGATGGCGCCGACCTCTCGAGGATAAAGGAACTTTAGTGCATGATAGGACTTCTGCTCAACTGTTAGAGAAGTATAAAATCAAAGGGAACTTGAATCTCATTTGGACTGTAGATATTCTCCAGGAGAATGCACATTACATCCAAGTTATGAAGTTTTTGGATATTTTGCCATTTTCTCATATACCAGAACTAGCAAAGCGTCTTGACATTGTTTTTGGGAATTTTACAGTGGATAAGATGAACCGCTGCCGTCACAAATGCATTGACAGGGATACTGTTGTTCCAATGAGATGGCCGGTGGTTTTCGGCAATTTCCCTATAGCTGATCATGAGGAGTTCCTTTCAAAACCATTGCCTTCTTTCAGTATAACAACTGATCGAGAAACAGCAACTTCAACATATGGGGAGACAGCGAAAGCAGTAAAACCAATTATCCCTTCGAGAAGCATTGTCAATCAAAAAGAAAGATTGGTATGGAAAATAAACGCTGAAGGAGGAGTGAAGGATCTCAGCACTTACCTTGAAGCTAACACTTTGGAGTTCTTGTCAAAAAAATTATCATCGCTAATTCTAGCACATAAGCCAGAAGCATCTACTTCCACTGACATGGAGACAGCGAAAGCAATAAAACCAATTGTCCCTTCGAAAAGCAATGTCAGCCAAAAAGAAAGATTGTTATGGAAAATAAAGGGTGCTAGACTTCCACCTAAATTATCCGGTGTCCGTGATGTATTCCATATCTCTGTTTTGAAGAAAAACCATGAAGATGCTTCACATGTTTTGAATTGGAAAGATTTGAAAATTCACAAAGGTCTATCCTATGACGAGAAGCTGGTTAGAATTGTTGATAAAAATGAACAAATTCTTCATGGTAGGAACATTCGCTTAGTGAACGTGATCTGGCATTATCATGGTATCGAGGAAGCAACATGGGAGTTGGAGACTCAAGTAATGGCTAAATATCCAGATTTGTTTGTGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

551

Amino Acids

63.27

Weight (kDa)

7.7

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF6469 PF20073 46 - 175 9.7e-13 Domain of unknown function (DUF6469)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 40
AccB1I GGYRCC 1 cut(s) 678
AccB7I CCANNNNNTGG 1 cut(s) 263
AciI CCGC 1 cut(s) 916
AclWI GGATC 3 cut(s) 19, 32, 1185
AcoI YGGCCR 1 cut(s) 965
AcsI RAATTY 5 cut(s) 147, 374, 892, 1473, 1533
AcuI CTGAAG 1 cut(s) 1182
AcyI GRCGYC 1 cut(s) 679
AfiI CCNNNNNNNGG 1 cut(s) 263
AflIII ACRYGT 1 cut(s) 1447
AjnI CCWGG 2 cut(s) 178, 792
AjuI GAANNNNNNNTTGG 4 cut(s) 1093, 1125, 1297, 1329
AluBI AGCT 5 cut(s) 170, 664, 995, 1199, 1504
AluI AGCT 5 cut(s) 170, 664, 995, 1199, 1504
Alw26I GTCTC 4 cut(s) 26, 1073, 1277, 1607
AlwI GGATC 3 cut(s) 19, 32, 1185
Ama87I CYCGRG 2 cut(s) 29, 689
AoxI GGCC 2 cut(s) 320, 965
ApeKI GCWGC 1 cut(s) 918
ApoI RAATTY 5 cut(s) 147, 374, 892, 1473, 1533
ArsI GACNNNNNNTTYG 2 cut(s) 869, 901
Asp700I GAANNNNTTC 2 cut(s) 65, 1533
AspLEI GCGC 1 cut(s) 681
AspS9I GGNCC 1 cut(s) 242
AsuHPI GGTGA 1 cut(s) 194
AsuII TTCGAA 1 cut(s) 1316
AvaI CYCGRG 2 cut(s) 29, 689
AvaII GGWCC 1 cut(s) 242
BaeI ACNNNNGTAYC 2 cut(s) 936, 969
BamHI GGATCC 1 cut(s) 24
BanI GGYRCC 1 cut(s) 678
BbsI GAAGAC 1 cut(s) 125
BbvI GCAGC 1 cut(s) 905
BccI CCATC 3 cut(s) 425, 669, 957
BceAI ACGGC 1 cut(s) 906
BciT130I CCWGG 2 cut(s) 180, 794
BciVI GTATCC 1 cut(s) 937
BclI TGATCA 1 cut(s) 997
BcoDI GTCTC 4 cut(s) 26, 1073, 1277, 1607
BfaI CTAG 3 cut(s) 863, 1244, 1368
BfmI CTRYAG 2 cut(s) 780, 990
BfoI RGCGCY 1 cut(s) 682
BfuI GTATCC 1 cut(s) 937
BisI GCNGC 1 cut(s) 919
BlsI GCNGC 1 cut(s) 920
Bme1390I CCNGG 2 cut(s) 180, 794
Bme18I GGWCC 1 cut(s) 242
BmeT110I CYCGRG 2 cut(s) 29, 689
BmgT120I GGNCC 1 cut(s) 242
BmiI GGNNCC 2 cut(s) 26, 680
BmrFI CCNGG 2 cut(s) 180, 794
BmsI GCATC 2 cut(s) 1271, 1429
BpiI GAAGAC 1 cut(s) 125
BpmI CTGGAG 2 cut(s) 374, 776
Bpu10I CCTNAGC 1 cut(s) 548
Bpu14I TTCGAA 1 cut(s) 1316
BpuEI CTTGAG 1 cut(s) 1602
BsaBI GATNNNNATC 1 cut(s) 231
BsaHI GRCGYC 1 cut(s) 679
BsaWI WCCGGW 1 cut(s) 1388
BsaXI ACNNNNNCTCC 2 cut(s) 1202, 1232
Bsc4I CCNNNNNNNGG 1 cut(s) 263
Bse118I RCCGGY 1 cut(s) 967
Bse1I ACTGG 1 cut(s) 391
Bse3DI GCAATG 3 cut(s) 273, 1022, 1330
Bse8I GATNNNNATC 1 cut(s) 231
BseBI CCWGG 2 cut(s) 180, 794
BseGI GGATG 4 cut(s) 175, 646, 680, 810
BseJI GATNNNNATC 1 cut(s) 231
BseLI CCNNNNNNNGG 1 cut(s) 263
BseMI GCAATG 3 cut(s) 273, 1022, 1330
BseMII CTCAG 2 cut(s) 537, 1195
BseNI ACTGG 1 cut(s) 391
BseRI GAGGAG 2 cut(s) 1019, 1182
BseXI GCAGC 1 cut(s) 905
BsgI GTGCAG 1 cut(s) 38
BshFI GGCC 2 cut(s) 322, 967
BshNI GGYRCC 1 cut(s) 678
BsiHKCI CYCGRG 2 cut(s) 29, 689
BsiSI CCGG 2 cut(s) 968, 1389
BslFI GGGAC 1 cut(s) 1295
BslI CCNNNNNNNGG 1 cut(s) 263
BsmAI GTCTC 4 cut(s) 26, 1073, 1277, 1607
BsmFI GGGAC 1 cut(s) 1295
BsmI GAATGC 1 cut(s) 805
BsnI GGCC 2 cut(s) 322, 967
BsoBI CYCGRG 2 cut(s) 29, 689
Bsp119I TTCGAA 1 cut(s) 1316
Bsp143I GATC 6 cut(s) 24, 385, 997, 1048, 1177, 1569
BspACI CCGC 1 cut(s) 916
BspANI GGCC 2 cut(s) 322, 967
BspCNI CTCAG 2 cut(s) 536, 1194
BspHI TCATGA 2 cut(s) 589, 1000
BspLI GGNNCC 2 cut(s) 26, 680
BspPI GGATC 3 cut(s) 19, 32, 1185
BspT104I TTCGAA 1 cut(s) 1316
BspT107I GGYRCC 1 cut(s) 678
BsrDI GCAATG 3 cut(s) 273, 1022, 1330
BsrFI RCCGGY 1 cut(s) 967
BsrI ACTGG 1 cut(s) 391
BssAI RCCGGY 1 cut(s) 967
BssMI GATC 6 cut(s) 24, 385, 997, 1048, 1177, 1569
BssNI GRCGYC 1 cut(s) 679
Bst2UI CCWGG 2 cut(s) 180, 794
Bst4CI ACNGT 5 cut(s) 628, 735, 781, 901, 949
Bst6I CTCTTC 1 cut(s) 522
BstACI GRCGYC 1 cut(s) 679
BstBI TTCGAA 1 cut(s) 1316
BstC8I GCNNGC 1 cut(s) 648
BstDEI CTNAG 4 cut(s) 523, 548, 1181, 1558
BstF5I GGATG 4 cut(s) 175, 646, 680, 810
BstH2I RGCGCY 1 cut(s) 682
BstHHI GCGC 1 cut(s) 681
BstKTI GATC 6 cut(s) 27, 388, 1000, 1051, 1180, 1572
BstMAI GTCTC 4 cut(s) 26, 1073, 1277, 1607
BstMBI GATC 6 cut(s) 24, 385, 997, 1048, 1177, 1569
BstMWI GCNNNNNNNGC 1 cut(s) 1329
BstNI CCWGG 2 cut(s) 180, 794
BstNSI RCATGY 3 cut(s) 134, 442, 1451
BstSCI CCNGG 2 cut(s) 178, 792
BstSFI CTRYAG 2 cut(s) 780, 990
BstV1I GCAGC 1 cut(s) 905
BstV2I GAAGAC 1 cut(s) 125
BstX2I RGATCY 2 cut(s) 24, 1177
BstXI CCANNNNNNTGG 3 cut(s) 13, 963, 1279
BstYI RGATCY 2 cut(s) 24, 1177
BsuI GTATCC 1 cut(s) 937
BsuRI GGCC 2 cut(s) 322, 967
BtgZI GCGATG 1 cut(s) 1218
BtsCI GGATG 4 cut(s) 175, 646, 680, 810
BtsIMutI CAGTG 3 cut(s) 624, 906, 1272
Cac8I GCNNGC 1 cut(s) 648
CciI TCATGA 2 cut(s) 589, 1000
CfoI GCGC 1 cut(s) 681
Cfr10I RCCGGY 1 cut(s) 967
Cfr13I GGNCC 1 cut(s) 242
CseI GACGC 1 cut(s) 860
DdeI CTNAG 4 cut(s) 523, 548, 1181, 1558
DinI GGCGCC 1 cut(s) 680
DpnI GATC 6 cut(s) 26, 387, 999, 1050, 1179, 1571
DpnII GATC 6 cut(s) 24, 385, 997, 1048, 1177, 1569
DrdI GACNNNNNNGTC 1 cut(s) 40
DseDI GACNNNNNNGTC 1 cut(s) 40
EaeI YGGCCR 1 cut(s) 965
Eam1104I CTCTTC 1 cut(s) 522
EarI CTCTTC 1 cut(s) 522
Eco147I AGGCCT 1 cut(s) 322
Eco32I GATATC 1 cut(s) 271
Eco47I GGWCC 1 cut(s) 242
Eco57I CTGAAG 1 cut(s) 1182
Eco88I CYCGRG 2 cut(s) 29, 689
EcoRII CCWGG 2 cut(s) 178, 792
EcoRV GATATC 1 cut(s) 271
EcoT22I ATGCAT 3 cut(s) 305, 444, 935
EgeI GGCGCC 1 cut(s) 680
EheI GGCGCC 1 cut(s) 680
FaqI GGGAC 1 cut(s) 1295
FauNDI CATATG 1 cut(s) 1072
FbaI TGATCA 1 cut(s) 997
Fnu4HI GCNGC 1 cut(s) 919
FokI GGATG 4 cut(s) 162, 653, 687, 797
Fsp4HI GCNGC 1 cut(s) 919
FspBI CTAG 3 cut(s) 863, 1244, 1368
GlaI GCGC 1 cut(s) 680
GluI GCNGC 1 cut(s) 919
GsuI CTGGAG 2 cut(s) 374, 776
HaeII RGCGCY 1 cut(s) 682
HaeIII GGCC 2 cut(s) 322, 967
HapII CCGG 2 cut(s) 968, 1389
HgaI GACGC 1 cut(s) 860
HhaI GCGC 1 cut(s) 681
Hin1I GRCGYC 1 cut(s) 679
Hin6I GCGC 1 cut(s) 679
HinP1I GCGC 1 cut(s) 679
HindIII AAGCTT 1 cut(s) 662
HinfI GANTC 8 cut(s) 121, 164, 232, 330, 431, 631, 766, 1615
HpaII CCGG 2 cut(s) 968, 1389
HphI GGTGA 1 cut(s) 194
Hpy166II GTNNAC 1 cut(s) 1564
Hpy188I TCNGA 3 cut(s) 436, 526, 574
Hpy188III TCNNGA 8 cut(s) 380, 590, 689, 875, 1001, 1052, 1113, 1637
Hpy8I GTNNAC 1 cut(s) 1564
HpyAV CCTTC 7 cut(s) 84, 505, 1038, 1119, 1157, 1168, 1323
HpyCH4III ACNGT 5 cut(s) 628, 735, 781, 901, 949
HpyCH4IV ACGT 1 cut(s) 1566
HpyCH4V TGCA 8 cut(s) 19, 134, 303, 442, 562, 712, 803, 933
HpyF10VI GCNNNNNNNGC 1 cut(s) 1329
HpyF3I CTNAG 4 cut(s) 523, 548, 1181, 1558
HpySE526I ACGT 1 cut(s) 1566
Hsp92I GRCGYC 1 cut(s) 679
HspAI GCGC 1 cut(s) 679
KasI GGCGCC 1 cut(s) 678
Ksp22I TGATCA 1 cut(s) 997
Kzo9I GATC 6 cut(s) 24, 385, 997, 1048, 1177, 1569
Lsp1109I GCAGC 1 cut(s) 905
LweI GCATC 2 cut(s) 1271, 1429
MaeI CTAG 3 cut(s) 863, 1244, 1368
MaeII ACGT 1 cut(s) 1566
MaeIII GTNAC 4 cut(s) 53, 126, 182, 923
MalI GATC 6 cut(s) 26, 387, 999, 1050, 1179, 1571
MboI GATC 6 cut(s) 24, 385, 997, 1048, 1177, 1569
MboII GAAGA 5 cut(s) 130, 539, 1435, 1448, 1529
MfeI CAATTG 1 cut(s) 1305
MflI RGATCY 2 cut(s) 24, 1177
Mly113I GGCGCC 1 cut(s) 679
MlyI GAGTC 2 cut(s) 115, 1609
MmeI TCCRAC 2 cut(s) 244, 1590
MnlI CCTC 9 cut(s) 15, 79, 333, 523, 685, 696, 997, 1160, 1585
Mph1103I ATGCAT 3 cut(s) 305, 444, 935
MroXI GAANNNNTTC 2 cut(s) 65, 1533
MseI TTAA 2 cut(s) 618, 656
MslI CAYNNNNRTG 5 cut(s) 11, 180, 1277, 1437, 1581
MspA1I CMGCKG 2 cut(s) 170, 918
MspI CCGG 2 cut(s) 968, 1389
MspR9I CCNGG 2 cut(s) 180, 794
MunI CAATTG 1 cut(s) 1305
Mva1269I GAATGC 1 cut(s) 805
MvaI CCWGG 2 cut(s) 180, 794
MwoI GCNNNNNNNGC 1 cut(s) 1329
NarI GGCGCC 1 cut(s) 679
NdeI CATATG 1 cut(s) 1072
NdeII GATC 6 cut(s) 24, 385, 997, 1048, 1177, 1569
NlaIV GGNNCC 2 cut(s) 26, 680
NmuCI GTSAC 3 cut(s) 126, 182, 923
NsiI ATGCAT 3 cut(s) 305, 444, 935
NspI RCATGY 3 cut(s) 134, 442, 1451
NspV TTCGAA 1 cut(s) 1316
PaeR7I CTCGAG 1 cut(s) 689
PagI TCATGA 2 cut(s) 589, 1000
PceI AGGCCT 1 cut(s) 322
PciI ACATGT 1 cut(s) 1447
PctI GAATGC 1 cut(s) 805
PdmI GAANNNNTTC 2 cut(s) 65, 1533
PfeI GAWTC 6 cut(s) 164, 232, 330, 431, 631, 766
PflFI GACNNNGTC 1 cut(s) 124
PflMI CCANNNNNTGG 1 cut(s) 263
PfoI TCCNGGA 1 cut(s) 792
PkrI GCNGC 1 cut(s) 920
PleI GAGTC 2 cut(s) 115, 1609
PluTI GGCGCC 1 cut(s) 682
PpsI GAGTC 2 cut(s) 115, 1609
PscI ACATGT 1 cut(s) 1447
Psp6I CCWGG 2 cut(s) 178, 792
PspGI CCWGG 2 cut(s) 178, 792
PspN4I GGNNCC 2 cut(s) 26, 680
PspPI GGNCC 1 cut(s) 242
PsuI RGATCY 2 cut(s) 24, 1177
PsyI GACNNNGTC 1 cut(s) 124
PvuII CAGCTG 1 cut(s) 170
RseI CAYNNNNRTG 5 cut(s) 11, 180, 1277, 1437, 1581
SaqAI TTAA 2 cut(s) 618, 656
SatI GCNGC 1 cut(s) 919
Sau3AI GATC 6 cut(s) 24, 385, 997, 1048, 1177, 1569
Sau96I GGNCC 1 cut(s) 242
SchI GAGTC 2 cut(s) 115, 1609
ScrFI CCNGG 2 cut(s) 180, 794
SfaNI GCATC 2 cut(s) 1271, 1429
SfcI CTRYAG 2 cut(s) 780, 990
SfoI GGCGCC 1 cut(s) 680
Sfr274I CTCGAG 1 cut(s) 689
SfuI TTCGAA 1 cut(s) 1316
SinI GGWCC 1 cut(s) 242
SlaI CTCGAG 1 cut(s) 689
SmiMI CAYNNNNRTG 5 cut(s) 11, 180, 1277, 1437, 1581
SmlI CTYRAG 2 cut(s) 689, 1617
SmoI CTYRAG 2 cut(s) 689, 1617
SseBI AGGCCT 1 cut(s) 322
SsiI CCGC 1 cut(s) 916
SspDI GGCGCC 1 cut(s) 678
SspMI CTAG 3 cut(s) 863, 1244, 1368
StuI AGGCCT 1 cut(s) 322
StyD4I CCNGG 2 cut(s) 178, 792
TaaI ACNGT 5 cut(s) 628, 735, 781, 901, 949
TaiI ACGT 1 cut(s) 1569
TaqI TCGA 7 cut(s) 410, 668, 690, 1051, 1112, 1316, 1590
TaqII GACCGA 1 cut(s) 259
TfiI GAWTC 6 cut(s) 164, 232, 330, 431, 631, 766
Tru1I TTAA 2 cut(s) 618, 656
Tru9I TTAA 2 cut(s) 618, 656
TscAI CASTG 3 cut(s) 631, 906, 1279
TseFI GTSAC 3 cut(s) 126, 182, 923
TseI GCWGC 1 cut(s) 918
Tsp45I GTSAC 3 cut(s) 126, 182, 923
TspDTI ATGAA 9 cut(s) 58, 131, 387, 497, 836, 926, 1449, 1529, 1542
TspGWI ACGGA 2 cut(s) 491, 1385
TspRI CASTG 3 cut(s) 631, 906, 1279
Tth111I GACNNNGTC 1 cut(s) 124
Van91I CCANNNNNTGG 1 cut(s) 263
VpaK11BI GGWCC 1 cut(s) 242
XapI RAATTY 5 cut(s) 147, 374, 892, 1473, 1533
XceI RCATGY 3 cut(s) 134, 442, 1451
XhoI CTCGAG 1 cut(s) 689
XmnI GAANNNNTTC 2 cut(s) 65, 1533
XspI CTAG 3 cut(s) 863, 1244, 1368
Zsp2I ATGCAT 3 cut(s) 305, 444, 935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.