Rorug06G0015500

AAA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000279
Physical Location & Seq
Reverse (-)
2010266 .. 2013048
2783 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0015500.1

Sequence Viewer

Length: 1293 bp
ATGTCTTCGAATCCCAACTCTCTCTACCCACAAGTCATCCAAACCAACCCAGAAGCCAAACCCACTTCTTCTTCTTCATCATCTTCTATGTACCCTTCAGCCGACGTGACCAACCTCGCCGAGGACCTCTTCCCGGAAACCGACGCCGCTTCGGAAAATACCCAATCCTCTGAAGAGATCCTGGTCAAGATTCCGGGCGCGATCGTCCACCTGATCCAGAAGGACTACAGCATCGAACTGGCATGCGGCGAACTCACCATCGTCGGTCTCCGGCAAGGCGGCAACGTAGTCGCGGTGCTCGCGCGCGTCGGCGACGAGATTCAGTGGCCGTTGGCCAAGGACGAAGCGGCTGTCAAGCTCGACCACTCCCACTACTTCTTCAACCTCCGCGTTCCGGCGAGTGGGGATAATGGCGAGATGGAGCTGCTCAACTATGGGTTGACGATTGCGACCAAGGGGCAGGACAGCTTGATGAGGGAGTTGGACCGGGTTTTGGAGACGTATAGTTGCTTTTCGGAGCAGAAGATGGAGGGTTTGGAGCACTGGGATGTTTTGGAGGGGTGTGCGGCGAGGGAGACTTCGCCGGAGGATTTAGATTCTGAAGATAAGAAGAAACTGATTGGTGACAGTTCCGCGGCGTACTGGACTACGCTGGCTCCGAATGTAGAGGATTACAGTTGCCGCTGTGCGAGGATGATTGCTTCGGGCTCGGGTCAGCTGATTAGGGGGATCTTGTGGTGTGGGGATGTGACTGTGGATAGGCTTAAGTGGGGAAATGAGTTCTTGAAGAAGAGGATGGGACCGTGTTCGAGTTCCGAGATTAGTCCAGAATCCTTGAAGAGGGTGCAAAGGGTTAAGAGGTTGACGAAGATGACTGAGGATTTGGCCTCTGGAATCCTTTCTGGGGTTATTAAAGTATCTGGATTCTTTACGAGTGCAATTGTTAACTCGAGAGTGGGCAAGAAATTTTTTAGCCTTCTCCCTGGAGAAATTATCCTGGCTTCCTTGGATGGATTCAGCAAAGTCTGCGATGCCGTTGAAGTTGCTGGAAGGAATGTCATGTCAACCTCATCGGTTGTCACCACTGGACTCGTTTCACAGAGGTACGGAGAGCCAGCAGCGAAGGTCACGAATGAAGGGCTTGATGCTGCAGGGTACGCTATAGGGACTGCTTGGGCGGTGTTCAAGATAAGAAAGGCTCTAAACCCCAAGAGTGTTATCAAGCCTACAACTCTTGCTAAAGCTTCTTCTGAATTAAAGTCCTCCAAGTCGATGTCGACAAGTAGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

430

Amino Acids

46.46

Weight (kDa)

5.53

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Senescence PF06911 232 - 411 5e-46 Senescence domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1277
AccII CGCG 7 cut(s) 200, 293, 302, 304, 306, 390, 635
AclWI GGATC 3 cut(s) 172, 208, 737
AcoI YGGCCR 2 cut(s) 326, 333
AcsI RAATTY 1 cut(s) 965
AcuI CTGAAG 3 cut(s) 81, 192, 621
AcyI GRCGYC 1 cut(s) 144
AfaI GTAC 4 cut(s) 92, 641, 1106, 1157
AfiI CCNNNNNNNGG 7 cut(s) 121, 133, 394, 401, 493, 840, 904
AflII CTTAAG 1 cut(s) 764
AgsI TTSAA 5 cut(s) 382, 787, 838, 1040, 1186
AjiI CACGTC 1 cut(s) 106
AjnI CCWGG 3 cut(s) 180, 982, 996
AluBI AGCT 5 cut(s) 358, 424, 468, 718, 1244
AluI AGCT 5 cut(s) 358, 424, 468, 718, 1244
Alw21I GWGCWC 2 cut(s) 300, 543
Alw26I GTCTC 3 cut(s) 272, 491, 569
AlwI GGATC 3 cut(s) 172, 208, 737
Ama87I CYCGRG 2 cut(s) 709, 949
AoxI GGCC 3 cut(s) 326, 333, 885
ApeKI GCWGC 3 cut(s) 424, 1118, 1148
ApoI RAATTY 1 cut(s) 965
ArsI GACNNNNNNTTYG 4 cut(s) 336, 368, 865, 897
Asp700I GAANNNNTTC 1 cut(s) 898
AspLEI GCGC 3 cut(s) 200, 304, 306
AspS9I GGNCC 3 cut(s) 124, 484, 800
AsuC2I CCSGG 3 cut(s) 134, 195, 488
AsuHPI GGTGA 3 cut(s) 247, 635, 1072
AsuII TTCGAA 1 cut(s) 8
AvaI CYCGRG 2 cut(s) 709, 949
AvaII GGWCC 3 cut(s) 124, 484, 800
BalI TGGCCA 1 cut(s) 335
BanII GRGCYC 1 cut(s) 710
Bbv12I GWGCWC 2 cut(s) 300, 543
BbvI GCAGC 3 cut(s) 411, 1130, 1135
BccI CCATC 5 cut(s) 266, 412, 520, 790, 1004
BceAI ACGGC 2 cut(s) 313, 1019
BcgI CGANNNNNNTGC 2 cut(s) 271, 305
BciT130I CCWGG 3 cut(s) 182, 984, 998
BcnI CCSGG 3 cut(s) 134, 195, 488
BcoDI GTCTC 3 cut(s) 272, 491, 569
BfmI CTRYAG 3 cut(s) 226, 1149, 1161
BfrI CTTAAG 1 cut(s) 764
Bme1390I CCNGG 6 cut(s) 134, 182, 195, 488, 984, 998
Bme18I GGWCC 3 cut(s) 124, 484, 800
BmeT110I CYCGRG 2 cut(s) 709, 949
BmgBI CACGTC 1 cut(s) 106
BmgT120I GGNCC 3 cut(s) 124, 484, 800
BmiI GGNNCC 2 cut(s) 657, 801
BmrFI CCNGG 6 cut(s) 134, 182, 195, 488, 984, 998
BmrI ACTGGG 1 cut(s) 553
BmsI GCATC 3 cut(s) 240, 1021, 1135
BmuI ACTGGG 1 cut(s) 553
BpmI CTGGAG 1 cut(s) 1005
Bpu14I TTCGAA 1 cut(s) 8
BpuMI CCSGG 3 cut(s) 134, 195, 488
BsaHI GRCGYC 1 cut(s) 144
BsaI GGTCTC 1 cut(s) 272
BsaJI CCNNGG 6 cut(s) 120, 336, 453, 633, 982, 1005
BsaXI ACNNNNNCTCC 2 cut(s) 640, 670
Bsc4I CCNNNNNNNGG 7 cut(s) 121, 133, 394, 401, 493, 840, 904
Bse1I ACTGG 4 cut(s) 243, 548, 647, 1090
BseBI CCWGG 3 cut(s) 182, 984, 998
BseDI CCNNGG 6 cut(s) 120, 336, 453, 633, 982, 1005
BseGI GGATG 6 cut(s) 36, 553, 699, 751, 801, 1015
BseLI CCNNNNNNNGG 7 cut(s) 121, 133, 394, 401, 493, 840, 904
BseMII CTCAG 1 cut(s) 867
BseNI ACTGG 4 cut(s) 243, 548, 647, 1090
BsePI GCGCGC 1 cut(s) 302
BseXI GCAGC 3 cut(s) 411, 1130, 1135
Bsh1236I CGCG 7 cut(s) 200, 293, 302, 304, 306, 390, 635
Bsh1285I CGRYCG 1 cut(s) 204
BshFI GGCC 3 cut(s) 328, 335, 887
BsiEI CGRYCG 1 cut(s) 204
BsiHKAI GWGCWC 2 cut(s) 300, 543
BsiHKCI CYCGRG 2 cut(s) 709, 949
BsiSI CCGG 6 cut(s) 134, 194, 271, 395, 487, 584
BslFI GGGAC 2 cut(s) 813, 1180
BslI CCNNNNNNNGG 7 cut(s) 121, 133, 394, 401, 493, 840, 904
BsmAI GTCTC 3 cut(s) 272, 491, 569
BsmBI CGTCTC 1 cut(s) 491
BsmFI GGGAC 2 cut(s) 813, 1180
BsnI GGCC 3 cut(s) 328, 335, 887
Bso31I GGTCTC 1 cut(s) 272
BsoBI CYCGRG 2 cut(s) 709, 949
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 3 cut(s) 300, 543, 710
Bsp143I GATC 4 cut(s) 177, 201, 213, 729
BspANI GGCC 3 cut(s) 328, 335, 887
BspCNI CTCAG 1 cut(s) 868
BspFNI CGCG 7 cut(s) 200, 293, 302, 304, 306, 390, 635
BspLI GGNNCC 2 cut(s) 657, 801
BspMAI CTGCAG 1 cut(s) 1153
BspPI GGATC 3 cut(s) 172, 208, 737
BspT104I TTCGAA 1 cut(s) 8
BspTI CTTAAG 1 cut(s) 764
BspTNI GGTCTC 1 cut(s) 272
BsrI ACTGG 4 cut(s) 243, 548, 647, 1090
BssECI CCNNGG 6 cut(s) 120, 336, 453, 633, 982, 1005
BssHII GCGCGC 1 cut(s) 302
BssMI GATC 4 cut(s) 177, 201, 213, 729
BssNI GRCGYC 1 cut(s) 144
BssT1I CCWWGG 3 cut(s) 336, 453, 1005
Bst2UI CCWGG 3 cut(s) 182, 984, 998
Bst4CI ACNGT 4 cut(s) 629, 677, 754, 804
Bst6I CTCTTC 4 cut(s) 134, 168, 785, 833
BstACI GRCGYC 1 cut(s) 144
BstAFI CTTAAG 1 cut(s) 764
BstAPI GCANNNNNTGC 1 cut(s) 1026
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 5 cut(s) 244, 300, 304, 654, 1116
BstDEI CTNAG 1 cut(s) 876
BstDSI CCRYGG 1 cut(s) 633
BstENI CCTNNNNNAGG 2 cut(s) 119, 838
BstF5I GGATG 6 cut(s) 36, 553, 699, 751, 801, 1015
BstFNI CGCG 7 cut(s) 200, 293, 302, 304, 306, 390, 635
BstHHI GCGC 3 cut(s) 200, 304, 306
BstKTI GATC 4 cut(s) 180, 204, 216, 732
BstMAI GTCTC 3 cut(s) 272, 491, 569
BstMBI GATC 4 cut(s) 177, 201, 213, 729
BstMCI CGRYCG 1 cut(s) 204
BstMWI GCNNNNNNNGC 3 cut(s) 299, 1026, 1157
BstNI CCWGG 3 cut(s) 182, 984, 998
BstNSI RCATGY 1 cut(s) 246
BstSCI CCNGG 6 cut(s) 132, 180, 193, 486, 982, 996
BstSFI CTRYAG 3 cut(s) 226, 1149, 1161
BstUI CGCG 7 cut(s) 200, 293, 302, 304, 306, 390, 635
BstV1I GCAGC 3 cut(s) 411, 1130, 1135
BstX2I RGATCY 2 cut(s) 177, 729
BstYI RGATCY 2 cut(s) 177, 729
BsuRI GGCC 3 cut(s) 328, 335, 887
BtgI CCRYGG 1 cut(s) 633
BtgZI GCGATG 1 cut(s) 1044
BtrI CACGTC 1 cut(s) 106
BtsCI GGATG 6 cut(s) 36, 553, 699, 751, 801, 1015
BtsIMutI CAGTG 3 cut(s) 329, 541, 1083
Cac8I GCNNGC 5 cut(s) 244, 300, 304, 654, 1116
CfoI GCGC 3 cut(s) 200, 304, 306
Cfr13I GGNCC 3 cut(s) 124, 484, 800
Cfr42I CCGCGG 1 cut(s) 636
CseI GACGC 2 cut(s) 152, 295
Csp6I GTAC 4 cut(s) 91, 640, 1105, 1156
CviAII CATG 2 cut(s) 243, 1060
CviQI GTAC 4 cut(s) 91, 640, 1105, 1156
DdeI CTNAG 1 cut(s) 876
DpnI GATC 4 cut(s) 179, 203, 215, 731
DpnII GATC 4 cut(s) 177, 201, 213, 729
EaeI YGGCCR 2 cut(s) 326, 333
Eam1104I CTCTTC 4 cut(s) 134, 168, 785, 833
EarI CTCTTC 4 cut(s) 134, 168, 785, 833
Eco130I CCWWGG 3 cut(s) 336, 453, 1005
Eco24I GRGCYC 1 cut(s) 710
Eco31I GGTCTC 1 cut(s) 272
Eco47I GGWCC 3 cut(s) 124, 484, 800
Eco57I CTGAAG 3 cut(s) 81, 192, 621
Eco88I CYCGRG 2 cut(s) 709, 949
EcoNI CCTNNNNNAGG 2 cut(s) 119, 838
EcoO109I RGGNCCY 1 cut(s) 124
EcoRII CCWGG 3 cut(s) 180, 982, 996
EcoT14I CCWWGG 3 cut(s) 336, 453, 1005
EcoT38I GRGCYC 1 cut(s) 710
ErhI CCWWGG 3 cut(s) 336, 453, 1005
Esp3I CGTCTC 1 cut(s) 491
FaeI CATG 2 cut(s) 246, 1063
FaiI YATR 6 cut(s) 89, 244, 435, 504, 1061, 1163
FaqI GGGAC 2 cut(s) 813, 1180
FatI CATG 2 cut(s) 242, 1059
FblI GTMKAC 1 cut(s) 1277
FokI GGATG 6 cut(s) 23, 560, 706, 758, 808, 1022
FriOI GRGCYC 1 cut(s) 710
GlaI GCGC 3 cut(s) 199, 303, 305
GsuI CTGGAG 1 cut(s) 1005
HaeIII GGCC 3 cut(s) 328, 335, 887
HapII CCGG 6 cut(s) 134, 194, 271, 395, 487, 584
HgaI GACGC 2 cut(s) 152, 295
HhaI GCGC 3 cut(s) 200, 304, 306
Hin1I GRCGYC 1 cut(s) 144
Hin1II CATG 2 cut(s) 246, 1063
Hin6I GCGC 3 cut(s) 198, 302, 304
HinP1I GCGC 3 cut(s) 198, 302, 304
HincII GTYRAC 5 cut(s) 441, 864, 946, 1065, 1278
HindII GTYRAC 5 cut(s) 441, 864, 946, 1065, 1278
HindIII AAGCTT 1 cut(s) 1242
HinfI GANTC 9 cut(s) 10, 190, 319, 596, 830, 894, 924, 1014, 1089
HpaI GTTAAC 1 cut(s) 946
HpaII CCGG 6 cut(s) 134, 194, 271, 395, 487, 584
HphI GGTGA 3 cut(s) 247, 635, 1072
Hpy166II GTNNAC 6 cut(s) 208, 441, 864, 946, 1065, 1278
Hpy188I TCNGA 7 cut(s) 154, 172, 517, 601, 660, 817, 1252
Hpy188III TCNNGA 9 cut(s) 187, 217, 784, 827, 891, 921, 951, 1129, 1186
Hpy8I GTNNAC 6 cut(s) 208, 441, 864, 946, 1065, 1278
Hpy99I CGWCG 5 cut(s) 107, 146, 266, 311, 317
HpyAV CCTTC 6 cut(s) 105, 214, 986, 1044, 1117, 1130
HpyCH4III ACNGT 4 cut(s) 629, 677, 754, 804
HpyCH4IV ACGT 3 cut(s) 105, 285, 500
HpyCH4V TGCA 3 cut(s) 847, 938, 1151
HpyF10VI GCNNNNNNNGC 3 cut(s) 299, 1026, 1157
HpyF3I CTNAG 1 cut(s) 876
HpySE526I ACGT 3 cut(s) 105, 285, 500
Hsp92I GRCGYC 1 cut(s) 144
Hsp92II CATG 2 cut(s) 246, 1063
HspAI GCGC 3 cut(s) 198, 302, 304
KspAI GTTAAC 1 cut(s) 946
KspI CCGCGG 1 cut(s) 636
Kzo9I GATC 4 cut(s) 177, 201, 213, 729
LmnI GCTCC 4 cut(s) 421, 517, 538, 661
Lsp1109I GCAGC 3 cut(s) 411, 1130, 1135
LweI GCATC 3 cut(s) 240, 1021, 1135
MaeII ACGT 3 cut(s) 105, 285, 500
MaeIII GTNAC 5 cut(s) 106, 623, 748, 1078, 1126
MalI GATC 4 cut(s) 179, 203, 215, 731
MauBI CGCGCGCG 1 cut(s) 302
MboI GATC 4 cut(s) 177, 201, 213, 729
MfeI CAATTG 1 cut(s) 939
MflI RGATCY 2 cut(s) 177, 729
MhlI GDGCHC 3 cut(s) 300, 543, 710
MlsI TGGCCA 1 cut(s) 335
MluCI AATT 4 cut(s) 939, 965, 990, 1253
MluNI TGGCCA 1 cut(s) 335
MlyI GAGTC 1 cut(s) 1083
MmeI TCCRAC 1 cut(s) 462
Mox20I TGGCCA 1 cut(s) 335
MroXI GAANNNNTTC 1 cut(s) 898
MscI TGGCCA 1 cut(s) 335
MseI TTAA 5 cut(s) 765, 855, 912, 945, 1256
MslI CAYNNNNRTG 1 cut(s) 546
Msp20I TGGCCA 1 cut(s) 335
MspA1I CMGCKG 3 cut(s) 635, 684, 718
MspCI CTTAAG 1 cut(s) 764
MspI CCGG 6 cut(s) 134, 194, 271, 395, 487, 584
MspR9I CCNGG 6 cut(s) 134, 182, 195, 488, 984, 998
MunI CAATTG 1 cut(s) 939
MvaI CCWGG 3 cut(s) 182, 984, 998
MvnI CGCG 7 cut(s) 200, 293, 302, 304, 306, 390, 635
MwoI GCNNNNNNNGC 3 cut(s) 299, 1026, 1157
NciI CCSGG 3 cut(s) 134, 195, 488
NdeII GATC 4 cut(s) 177, 201, 213, 729
NlaIII CATG 2 cut(s) 246, 1063
NlaIV GGNNCC 2 cut(s) 657, 801
NmeAIII GCCGAG 1 cut(s) 145
NmuCI GTSAC 5 cut(s) 106, 623, 748, 1078, 1126
NspI RCATGY 1 cut(s) 246
NspV TTCGAA 1 cut(s) 8
PaeI GCATGC 1 cut(s) 246
PaeR7I CTCGAG 1 cut(s) 949
PauI GCGCGC 1 cut(s) 302
PcsI WCGNNNNNNNCGW 1 cut(s) 656
PdmI GAANNNNTTC 1 cut(s) 898
PfeI GAWTC 8 cut(s) 10, 190, 319, 596, 830, 894, 924, 1014
PfoI TCCNGGA 1 cut(s) 132
Ple19I CGATCG 1 cut(s) 204
PleI GAGTC 1 cut(s) 1083
PpsI GAGTC 1 cut(s) 1083
PpuMI RGGWCCY 1 cut(s) 124
Psp5II RGGWCCY 1 cut(s) 124
Psp6I CCWGG 3 cut(s) 180, 982, 996
PspGI CCWGG 3 cut(s) 180, 982, 996
PspN4I GGNNCC 2 cut(s) 657, 801
PspPI GGNCC 3 cut(s) 124, 484, 800
PspPPI RGGWCCY 1 cut(s) 124
PstI CTGCAG 1 cut(s) 1153
PsuI RGATCY 2 cut(s) 177, 729
PteI GCGCGC 1 cut(s) 302
PvuI CGATCG 1 cut(s) 204
PvuII CAGCTG 1 cut(s) 718
RsaI GTAC 4 cut(s) 92, 641, 1106, 1157
RsaNI GTAC 4 cut(s) 91, 640, 1105, 1156
RseI CAYNNNNRTG 1 cut(s) 546
SacII CCGCGG 1 cut(s) 636
SalI GTCGAC 1 cut(s) 1276
SaqAI TTAA 5 cut(s) 765, 855, 912, 945, 1256
Sau3AI GATC 4 cut(s) 177, 201, 213, 729
Sau96I GGNCC 3 cut(s) 124, 484, 800
SchI GAGTC 1 cut(s) 1083
ScrFI CCNGG 6 cut(s) 134, 182, 195, 488, 984, 998
SduI GDGCHC 3 cut(s) 300, 543, 710
SfaNI GCATC 3 cut(s) 240, 1021, 1135
SfcI CTRYAG 3 cut(s) 226, 1149, 1161
Sfr274I CTCGAG 1 cut(s) 949
Sfr303I CCGCGG 1 cut(s) 636
SfuI TTCGAA 1 cut(s) 8
SgrBI CCGCGG 1 cut(s) 636
SinI GGWCC 3 cut(s) 124, 484, 800
SlaI CTCGAG 1 cut(s) 949
SmiMI CAYNNNNRTG 1 cut(s) 546
SmlI CTYRAG 2 cut(s) 764, 949
SmoI CTYRAG 2 cut(s) 764, 949
SphI GCATGC 1 cut(s) 246
Sse9I AATT 4 cut(s) 939, 965, 990, 1253
StyD4I CCNGG 6 cut(s) 132, 180, 193, 486, 982, 996
StyI CCWWGG 3 cut(s) 336, 453, 1005
TaaI ACNGT 4 cut(s) 629, 677, 754, 804
TaiI ACGT 3 cut(s) 108, 288, 503
TaqI TCGA 7 cut(s) 8, 234, 360, 809, 950, 1271, 1277
TaqII GACCGA 1 cut(s) 254
TasI AATT 4 cut(s) 939, 965, 990, 1253
TauI GCSGC 7 cut(s) 149, 249, 282, 350, 569, 638, 684
TfiI GAWTC 8 cut(s) 10, 190, 319, 596, 830, 894, 924, 1014
Tru1I TTAA 5 cut(s) 765, 855, 912, 945, 1256
Tru9I TTAA 5 cut(s) 765, 855, 912, 945, 1256
TscAI CASTG 3 cut(s) 329, 548, 1090
TseFI GTSAC 5 cut(s) 106, 623, 748, 1078, 1126
TseI GCWGC 3 cut(s) 424, 1118, 1148
Tsp45I GTSAC 5 cut(s) 106, 623, 748, 1078, 1126
TspDTI ATGAA 2 cut(s) 66, 1149
TspGWI ACGGA 1 cut(s) 1122
TspRI CASTG 3 cut(s) 329, 548, 1090
Vha464I CTTAAG 1 cut(s) 764
VpaK11BI GGWCC 3 cut(s) 124, 484, 800
XagI CCTNNNNNAGG 2 cut(s) 119, 838
XapI RAATTY 1 cut(s) 965
XceI RCATGY 1 cut(s) 246
XhoI CTCGAG 1 cut(s) 949
XmiI GTMKAC 1 cut(s) 1277
XmnI GAANNNNTTC 1 cut(s) 898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.