Rh3DG319400

AAA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000279
Physical Location & Seq
Forward (+)
34596308 .. 34602154
5847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG319400.1

Sequence Viewer

Length: 1635 bp
ATGGGGATGAAGAGTAAGCTGAAACAGGAACAAGTTACAGATACTAGCAGCCTAGTGGGTTTGGTATTCTCTTGGTCTATTTCGGATGTTCTCAATGAAAATCTTTACAGAAATCAGGTGCAGAGGATCCCCGAGACATTTGTGTCATTGACGAGTTACAAGAAATCTTTCATTCCTTCACTTGTTGAGGAAACTCATGCTGATTTACTATCAAATATGAAGACTCTGTCACATGCACCTACTTGTGAAATTTTGACAATCGTAGATTCAGCTGAACATCCTGGTGACTTGTTTTACGATATAATGTATAAGAGAGATACAGAAACTGATGGGAATCACAAAGGACCGATGTATGAGCCACAGGTTGGAGATATCATTGCCTTGACAAATGTTAGACCAAAATGCATTAATGATTTGAACAGGCCTCCAAGGTTCTATCTAATCGCTTATGTTGATAAAGCAAATGATATTGAAGAATTTCCTGATGATCTCCAGTTCAAAATGCTATCATCGAAGCCTATCAACTATGGAGAACCAGACATGCATAAGAGCAAGAGAGAGACACTTTTTGCTGTCTATCTTATGAACTTGACAACAAATCTCCGTGTATGGAAGGCTTTGAACTCAGAAGAGGGAAATACAAATATCATTAGCAAAGTTCTGCAACCCAAGTCAGATGTTTGCTTCACTGATGACTTTCGGAACTCCATAATAAAAATTAAAGACACTGTGATTCTTCGGGAAGTACTCGCGTTATTAACCAAGCTTTTGAGTGGATGGCGCCGACCTCACAAGGATAAAGGAAATTTAGTGTATGATGGGACTTCTGCTCAGCTGTTAGAGAAGTATAAAATCAAAGGGCACTTGAATCTCATTTGGACTGTAGATATTCTCCAGGAGAATGCACATTACGTCCAAGTTATGAAGTTTTTGGATATTTTGCCATTTTCTCATACACCAGAACTAGCAAAGCGTCTTGACATTGTTTTTGGGAATTTTACAGTGGACAAGATGAACCGCTGCCGTCACAAATGCATTGACAGGGATACTGTCGTTCCAATGAGATGGCCGGTGGTCTTGGGCAATTTCCCTATAGCTGATCATGAGGAGTTCCTTTCAAAACCATTGCCTTCTTTCAGTATAACAACTAATCGAGAAACAGCAACTTCAACATATGGGGAGACAGCGAAAGCAGTAAAACCAATTATCCCTTCGAGAAGCATTGTCAATCAAAAAGAAAGATTGTTATGGAAAATAAACGCTGAAGGAGGAGTGAAGGATCTCAGCACTTGCCTTGAAGCTAACACTTTGGAGTTCTTGTCAAAAAAATTATCATCACTAATTCTAGCAGCTAAGCCAGAAGCATCTAATTCCACTGACATGGAGACAGCGAAAGCAATAAAACCAATTGTCCCTTCGAAAAGCAATGTCAGCCAAAAAGAAAGATTGTTATGGAAAATAAAGGGTGAAGAAGGAGTGAAGGATTTCAGCACTTGCCTTGAAGCTATAATTTTGGAGTTCTTGTCAAAACCATTATCATCACTAATGGTTTTCGGGCTGCTTCTGCTTTTGGGATTGATTTTGGGCAGCTTCTGTTTTTGGGCTTACAGTATGGTGTTTGGTAAAGTTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

544

Amino Acids

61.67

Weight (kDa)

8.22

Isoelectric Point (pI)

32.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF6469 PF20073 80 - 209 5.8e-13 Domain of unknown function (DUF6469)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 142
AccB1I GGYRCC 1 cut(s) 780
AccB7I CCANNNNNTGG 1 cut(s) 365
AccII CGCG 1 cut(s) 752
AciI CCGC 1 cut(s) 1018
AclWI GGATC 3 cut(s) 121, 134, 1287
AcoI YGGCCR 1 cut(s) 1067
AcsI RAATTY 4 cut(s) 249, 476, 805, 994
AcuI CTGAAG 1 cut(s) 1284
AcyI GRCGYC 1 cut(s) 781
AfaI GTAC 1 cut(s) 747
AfiI CCNNNNNNNGG 1 cut(s) 365
AgsI TTSAA 9 cut(s) 418, 473, 499, 622, 868, 1119, 1170, 1298, 1502
AjnI CCWGG 2 cut(s) 280, 894
AjuI GAANNNNNNNTTGG 4 cut(s) 1195, 1227, 1399, 1431
AluBI AGCT 9 cut(s) 19, 272, 766, 835, 1097, 1301, 1352, 1505, 1590
AluI AGCT 9 cut(s) 19, 272, 766, 835, 1097, 1301, 1352, 1505, 1590
Alw26I GTCTC 4 cut(s) 128, 554, 1175, 1379
AlwI GGATC 3 cut(s) 121, 134, 1287
AlwNI CAGNNNCTG 2 cut(s) 326, 1593
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 2 cut(s) 422, 1067
ApeKI GCWGC 5 cut(s) 48, 1020, 1349, 1558, 1587
ApoI RAATTY 4 cut(s) 249, 476, 805, 994
ArsI GACNNNNNNTTYG 2 cut(s) 971, 1003
AseI ATTAAT 1 cut(s) 408
Asp700I GAANNNNTTC 3 cut(s) 167, 477, 1484
AspLEI GCGC 1 cut(s) 783
AspS9I GGNCC 1 cut(s) 344
AsuHPI GGTGA 2 cut(s) 296, 1478
AsuII TTCGAA 1 cut(s) 1418
AvaI CYCGRG 1 cut(s) 131
AvaII GGWCC 1 cut(s) 344
BaeGI GKGCMC 1 cut(s) 864
BaeI ACNNNNGTAYC 2 cut(s) 1038, 1071
BamHI GGATCC 1 cut(s) 126
BanI GGYRCC 1 cut(s) 780
BbsI GAAGAC 1 cut(s) 227
BbvI GCAGC 5 cut(s) 60, 1007, 1361, 1545, 1599
BccI CCATC 4 cut(s) 323, 771, 812, 1059
BceAI ACGGC 1 cut(s) 1008
BciT130I CCWGG 2 cut(s) 282, 896
BciVI GTATCC 1 cut(s) 1039
BclI TGATCA 1 cut(s) 1099
BcoDI GTCTC 4 cut(s) 128, 554, 1175, 1379
BfaI CTAG 4 cut(s) 45, 53, 965, 1346
BfmI CTRYAG 2 cut(s) 882, 1092
BfoI RGCGCY 1 cut(s) 784
BfuI GTATCC 1 cut(s) 1039
BisI GCNGC 5 cut(s) 49, 1021, 1350, 1559, 1588
BlpI GCTNAGC 2 cut(s) 831, 1353
BlsI GCNGC 5 cut(s) 50, 1022, 1351, 1560, 1589
BmcAI AGTACT 1 cut(s) 747
Bme1390I CCNGG 2 cut(s) 282, 896
Bme18I GGWCC 1 cut(s) 344
BmeT110I CYCGRG 1 cut(s) 131
BmgT120I GGNCC 1 cut(s) 344
BmiI GGNNCC 2 cut(s) 128, 782
BmrFI CCNGG 2 cut(s) 282, 896
BmsI GCATC 1 cut(s) 1373
BpiI GAAGAC 1 cut(s) 227
BpmI CTGGAG 2 cut(s) 476, 878
Bpu1102I GCTNAGC 2 cut(s) 831, 1353
Bpu14I TTCGAA 1 cut(s) 1418
BsaBI GATNNNNATC 1 cut(s) 333
BsaHI GRCGYC 1 cut(s) 781
BsaJI CCNNGG 1 cut(s) 428
BsaXI ACNNNNNCTCC 4 cut(s) 1304, 1334, 1508, 1538
Bsc4I CCNNNNNNNGG 1 cut(s) 365
Bse118I RCCGGY 1 cut(s) 1069
Bse1I ACTGG 1 cut(s) 493
Bse3DI GCAATG 3 cut(s) 375, 1124, 1432
Bse8I GATNNNNATC 1 cut(s) 333
BseBI CCWGG 2 cut(s) 282, 896
BseDI CCNNGG 1 cut(s) 428
BseGI GGATG 4 cut(s) 12, 91, 277, 782
BseJI GATNNNNATC 1 cut(s) 333
BseLI CCNNNNNNNGG 1 cut(s) 365
BseMI GCAATG 3 cut(s) 375, 1124, 1432
BseMII CTCAG 3 cut(s) 639, 845, 1297
BseNI ACTGG 1 cut(s) 493
BseRI GAGGAG 2 cut(s) 1121, 1284
BseSI GKGCMC 1 cut(s) 864
BseXI GCAGC 5 cut(s) 60, 1007, 1361, 1545, 1599
BsgI GTGCAG 1 cut(s) 140
Bsh1236I CGCG 1 cut(s) 752
BshFI GGCC 2 cut(s) 424, 1069
BshNI GGYRCC 1 cut(s) 780
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 1 cut(s) 1070
BslFI GGGAC 2 cut(s) 835, 1397
BslI CCNNNNNNNGG 1 cut(s) 365
BsmAI GTCTC 4 cut(s) 128, 554, 1175, 1379
BsmFI GGGAC 2 cut(s) 835, 1397
BsmI GAATGC 1 cut(s) 907
BsnI GGCC 2 cut(s) 424, 1069
BsoBI CYCGRG 1 cut(s) 131
Bsp119I TTCGAA 1 cut(s) 1418
Bsp1286I GDGCHC 1 cut(s) 864
Bsp143I GATC 4 cut(s) 126, 487, 1099, 1279
Bsp1720I GCTNAGC 2 cut(s) 831, 1353
BspACI CCGC 1 cut(s) 1018
BspANI GGCC 2 cut(s) 424, 1069
BspCNI CTCAG 3 cut(s) 638, 844, 1296
BspFNI CGCG 1 cut(s) 752
BspHI TCATGA 1 cut(s) 1102
BspLI GGNNCC 2 cut(s) 128, 782
BspPI GGATC 3 cut(s) 121, 134, 1287
BspT104I TTCGAA 1 cut(s) 1418
BspT107I GGYRCC 1 cut(s) 780
BsrDI GCAATG 3 cut(s) 375, 1124, 1432
BsrFI RCCGGY 1 cut(s) 1069
BsrI ACTGG 1 cut(s) 493
BssAI RCCGGY 1 cut(s) 1069
BssECI CCNNGG 1 cut(s) 428
BssMI GATC 4 cut(s) 126, 487, 1099, 1279
BssNI GRCGYC 1 cut(s) 781
BssT1I CCWWGG 1 cut(s) 428
Bst2UI CCWGG 2 cut(s) 282, 896
Bst4CI ACNGT 5 cut(s) 730, 883, 1003, 1051, 1610
Bst6I CTCTTC 2 cut(s) 5, 624
BstACI GRCGYC 1 cut(s) 781
BstBI TTCGAA 1 cut(s) 1418
BstDEI CTNAG 4 cut(s) 625, 831, 1283, 1353
BstF5I GGATG 4 cut(s) 12, 91, 277, 782
BstFNI CGCG 1 cut(s) 752
BstH2I RGCGCY 1 cut(s) 784
BstHHI GCGC 1 cut(s) 783
BstKTI GATC 4 cut(s) 129, 490, 1102, 1282
BstMAI GTCTC 4 cut(s) 128, 554, 1175, 1379
BstMBI GATC 4 cut(s) 126, 487, 1099, 1279
BstMWI GCNNNNNNNGC 2 cut(s) 1431, 1564
BstNI CCWGG 2 cut(s) 282, 896
BstNSI RCATGY 2 cut(s) 236, 544
BstSCI CCNGG 2 cut(s) 280, 894
BstSFI CTRYAG 2 cut(s) 882, 1092
BstSLI GKGCMC 1 cut(s) 864
BstUI CGCG 1 cut(s) 752
BstV1I GCAGC 5 cut(s) 60, 1007, 1361, 1545, 1599
BstV2I GAAGAC 1 cut(s) 227
BstX2I RGATCY 2 cut(s) 126, 1279
BstXI CCANNNNNNTGG 2 cut(s) 1065, 1381
BstYI RGATCY 2 cut(s) 126, 1279
BsuI GTATCC 1 cut(s) 1039
BsuRI GGCC 2 cut(s) 424, 1069
BtsCI GGATG 4 cut(s) 12, 91, 277, 782
BtsIMutI CAGTG 4 cut(s) 687, 726, 1008, 1374
CaiI CAGNNNCTG 2 cut(s) 326, 1593
CciI TCATGA 1 cut(s) 1102
CfoI GCGC 1 cut(s) 783
Cfr10I RCCGGY 1 cut(s) 1069
Cfr13I GGNCC 1 cut(s) 344
CseI GACGC 1 cut(s) 962
Csp6I GTAC 1 cut(s) 746
CviAII CATG 5 cut(s) 197, 233, 541, 1103, 1381
CviQI GTAC 1 cut(s) 746
DdeI CTNAG 4 cut(s) 625, 831, 1283, 1353
DinI GGCGCC 1 cut(s) 782
DpnI GATC 4 cut(s) 128, 489, 1101, 1281
DpnII GATC 4 cut(s) 126, 487, 1099, 1279
DrdI GACNNNNNNGTC 1 cut(s) 142
DseDI GACNNNNNNGTC 1 cut(s) 142
EaeI YGGCCR 1 cut(s) 1067
Eam1104I CTCTTC 2 cut(s) 5, 624
EarI CTCTTC 2 cut(s) 5, 624
Eco130I CCWWGG 1 cut(s) 428
Eco147I AGGCCT 1 cut(s) 424
Eco32I GATATC 1 cut(s) 373
Eco47I GGWCC 1 cut(s) 344
Eco57I CTGAAG 1 cut(s) 1284
Eco88I CYCGRG 1 cut(s) 131
EcoRII CCWGG 2 cut(s) 280, 894
EcoRV GATATC 1 cut(s) 373
EcoT14I CCWWGG 1 cut(s) 428
EcoT22I ATGCAT 3 cut(s) 407, 546, 1037
EgeI GGCGCC 1 cut(s) 782
EheI GGCGCC 1 cut(s) 782
ErhI CCWWGG 1 cut(s) 428
FaeI CATG 5 cut(s) 200, 236, 544, 1106, 1384
FaqI GGGAC 2 cut(s) 835, 1397
FatI CATG 5 cut(s) 196, 232, 540, 1102, 1380
FauNDI CATATG 1 cut(s) 1174
FbaI TGATCA 1 cut(s) 1099
Fnu4HI GCNGC 5 cut(s) 49, 1021, 1350, 1559, 1588
FokI GGATG 4 cut(s) 19, 98, 264, 789
Fsp4HI GCNGC 5 cut(s) 49, 1021, 1350, 1559, 1588
FspBI CTAG 4 cut(s) 45, 53, 965, 1346
GlaI GCGC 1 cut(s) 782
GluI GCNGC 5 cut(s) 49, 1021, 1350, 1559, 1588
GsuI CTGGAG 2 cut(s) 476, 878
HaeII RGCGCY 1 cut(s) 784
HaeIII GGCC 2 cut(s) 424, 1069
HapII CCGG 1 cut(s) 1070
HgaI GACGC 1 cut(s) 962
HhaI GCGC 1 cut(s) 783
Hin1I GRCGYC 1 cut(s) 781
Hin1II CATG 5 cut(s) 200, 236, 544, 1106, 1384
Hin6I GCGC 1 cut(s) 781
HinP1I GCGC 1 cut(s) 781
HindIII AAGCTT 1 cut(s) 764
HinfI GANTC 5 cut(s) 223, 266, 334, 733, 868
HpaII CCGG 1 cut(s) 1070
HphI GGTGA 2 cut(s) 296, 1478
Hpy166II GTNNAC 1 cut(s) 1006
Hpy188I TCNGA 4 cut(s) 85, 628, 676, 702
Hpy188III TCNNGA 6 cut(s) 482, 740, 977, 1103, 1154, 1215
Hpy8I GTNNAC 1 cut(s) 1006
HpyAV CCTTC 9 cut(s) 186, 607, 1140, 1221, 1259, 1270, 1425, 1466, 1474
HpyCH4III ACNGT 5 cut(s) 730, 883, 1003, 1051, 1610
HpyCH4IV ACGT 1 cut(s) 912
HpyCH4V TGCA 7 cut(s) 121, 236, 405, 544, 664, 905, 1035
HpyF10VI GCNNNNNNNGC 2 cut(s) 1431, 1564
HpyF3I CTNAG 4 cut(s) 625, 831, 1283, 1353
HpySE526I ACGT 1 cut(s) 912
Hsp92I GRCGYC 1 cut(s) 781
Hsp92II CATG 5 cut(s) 200, 236, 544, 1106, 1384
HspAI GCGC 1 cut(s) 781
KasI GGCGCC 1 cut(s) 780
Ksp22I TGATCA 1 cut(s) 1099
Kzo9I GATC 4 cut(s) 126, 487, 1099, 1279
Lsp1109I GCAGC 5 cut(s) 60, 1007, 1361, 1545, 1599
LweI GCATC 1 cut(s) 1373
MaeI CTAG 4 cut(s) 45, 53, 965, 1346
MaeII ACGT 1 cut(s) 912
MaeIII GTNAC 5 cut(s) 34, 155, 228, 284, 1025
MalI GATC 4 cut(s) 128, 489, 1101, 1281
MboI GATC 4 cut(s) 126, 487, 1099, 1279
MboII GAAGA 6 cut(s) 22, 232, 485, 641, 728, 1481
MfeI CAATTG 1 cut(s) 1407
MflI RGATCY 2 cut(s) 126, 1279
MhlI GDGCHC 1 cut(s) 864
Mly113I GGCGCC 1 cut(s) 781
MlyI GAGTC 1 cut(s) 217
MmeI TCCRAC 1 cut(s) 346
MnlI CCTC 7 cut(s) 117, 181, 435, 625, 798, 1099, 1262
Mph1103I ATGCAT 3 cut(s) 407, 546, 1037
MroXI GAANNNNTTC 3 cut(s) 167, 477, 1484
MseI TTAA 3 cut(s) 408, 720, 758
MslI CAYNNNNRTG 2 cut(s) 282, 1379
MspA1I CMGCKG 3 cut(s) 272, 835, 1020
MspI CCGG 1 cut(s) 1070
MspR9I CCNGG 2 cut(s) 282, 896
MunI CAATTG 1 cut(s) 1407
Mva1269I GAATGC 1 cut(s) 907
MvaI CCWGG 2 cut(s) 282, 896
MvnI CGCG 1 cut(s) 752
MwoI GCNNNNNNNGC 2 cut(s) 1431, 1564
NarI GGCGCC 1 cut(s) 781
NdeI CATATG 1 cut(s) 1174
NdeII GATC 4 cut(s) 126, 487, 1099, 1279
NlaIII CATG 5 cut(s) 200, 236, 544, 1106, 1384
NlaIV GGNNCC 2 cut(s) 128, 782
NmuCI GTSAC 3 cut(s) 228, 284, 1025
NsiI ATGCAT 3 cut(s) 407, 546, 1037
NspI RCATGY 2 cut(s) 236, 544
NspV TTCGAA 1 cut(s) 1418
PagI TCATGA 1 cut(s) 1102
PceI AGGCCT 1 cut(s) 424
PctI GAATGC 1 cut(s) 907
PdmI GAANNNNTTC 3 cut(s) 167, 477, 1484
PfeI GAWTC 4 cut(s) 266, 334, 733, 868
PflFI GACNNNGTC 1 cut(s) 226
PflMI CCANNNNNTGG 1 cut(s) 365
PfoI TCCNGGA 1 cut(s) 894
PkrI GCNGC 5 cut(s) 50, 1022, 1351, 1560, 1589
PleI GAGTC 1 cut(s) 217
PluTI GGCGCC 1 cut(s) 784
PpsI GAGTC 1 cut(s) 217
PshBI ATTAAT 1 cut(s) 408
Psp6I CCWGG 2 cut(s) 280, 894
PspGI CCWGG 2 cut(s) 280, 894
PspN4I GGNNCC 2 cut(s) 128, 782
PspPI GGNCC 1 cut(s) 344
PstNI CAGNNNCTG 2 cut(s) 326, 1593
PsuI RGATCY 2 cut(s) 126, 1279
PsyI GACNNNGTC 1 cut(s) 226
PvuII CAGCTG 2 cut(s) 272, 835
RsaI GTAC 1 cut(s) 747
RsaNI GTAC 1 cut(s) 746
RseI CAYNNNNRTG 2 cut(s) 282, 1379
SaqAI TTAA 3 cut(s) 408, 720, 758
SatI GCNGC 5 cut(s) 49, 1021, 1350, 1559, 1588
Sau3AI GATC 4 cut(s) 126, 487, 1099, 1279
Sau96I GGNCC 1 cut(s) 344
ScaI AGTACT 1 cut(s) 747
SchI GAGTC 1 cut(s) 217
ScrFI CCNGG 2 cut(s) 282, 896
SduI GDGCHC 1 cut(s) 864
SfaNI GCATC 1 cut(s) 1373
SfcI CTRYAG 2 cut(s) 882, 1092
SfoI GGCGCC 1 cut(s) 782
SfuI TTCGAA 1 cut(s) 1418
SinI GGWCC 1 cut(s) 344
SmiMI CAYNNNNRTG 2 cut(s) 282, 1379
SseBI AGGCCT 1 cut(s) 424
SsiI CCGC 1 cut(s) 1018
SspDI GGCGCC 1 cut(s) 780
SspMI CTAG 4 cut(s) 45, 53, 965, 1346
StuI AGGCCT 1 cut(s) 424
StyD4I CCNGG 2 cut(s) 280, 894
StyI CCWWGG 1 cut(s) 428
TaaI ACNGT 5 cut(s) 730, 883, 1003, 1051, 1610
TaiI ACGT 1 cut(s) 915
TaqI TCGA 4 cut(s) 512, 1153, 1214, 1418
TaqII GACCGA 1 cut(s) 361
TatI WGTACW 1 cut(s) 745
TfiI GAWTC 4 cut(s) 266, 334, 733, 868
Tru1I TTAA 3 cut(s) 408, 720, 758
Tru9I TTAA 3 cut(s) 408, 720, 758
TscAI CASTG 4 cut(s) 694, 733, 1008, 1381
TseFI GTSAC 3 cut(s) 228, 284, 1025
TseI GCWGC 5 cut(s) 48, 1020, 1349, 1558, 1587
Tsp45I GTSAC 3 cut(s) 228, 284, 1025
TspDTI ATGAA 7 cut(s) 23, 111, 160, 233, 599, 938, 1028
TspGWI ACGGA 1 cut(s) 593
TspRI CASTG 4 cut(s) 694, 733, 1008, 1381
Tth111I GACNNNGTC 1 cut(s) 226
Van91I CCANNNNNTGG 1 cut(s) 365
VpaK11BI GGWCC 1 cut(s) 344
VspI ATTAAT 1 cut(s) 408
XapI RAATTY 4 cut(s) 249, 476, 805, 994
XceI RCATGY 2 cut(s) 236, 544
XmnI GAANNNNTTC 3 cut(s) 167, 477, 1484
XspI CTAG 4 cut(s) 45, 53, 965, 1346
ZrmI AGTACT 1 cut(s) 747
Zsp2I ATGCAT 3 cut(s) 407, 546, 1037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.