pycom09g18900

AAA domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
19680581 .. 19683412
2832 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g18900.1

Sequence Viewer

Length: 2280 bp
ATGATAAAGCTGACCTTCTTGAGGTATTTCTCGATCATCGTATTAAAATACTTGTTTGGATCGATCAATTGTTTGAGGCCCTTTTCTGGATGGAAGTATCTGTTAAGTTCAATGATACGTCTACTTGAGGAACCAGATGAAGAGTACTCTTTATATTTGCAAAAGAGAGCAGAAAAACAAGAACAGAGTGCTCAAGGAAATGAGAAGAAAAACACAAAGAGAGCAGAAAAACACAAAGAGAGTGCTCAAGGAAATGAGAAGAAAAACACAAAGAGAGCAGAAAAACACAAAGCAAGTGCTCAAGGAATTGAGAAGGGTACTAAAGGAAACAATGAAAGCGTAAAAGAGGATGATCCATTGACGTTTGAGGAGTTTGTGAAGAAAAAGTTTGATTCAATTTTTGAGTCACTGAAGATCTGCATGGTAAATTTGTACACTCACTTACCAACTTCTTGCATTCCACTGAAGGTAGTGAAGGACATGGATGAAGCTTCGGGTTTGCTCAAGTCCTATAAATCTTCCATGCATCGTATCAGTGTTGCTAAGGAAGGTTTAAACTTAGTCCTAAAAGATTTCAAAGTTTCAGGAAGCATTGTCGGTCGCTTTATACAGTTGGGAAACAAGTGTGTTTGTAAACTGAAGTTGCTTCCTCAGAAATTTGGTGTCCCAAAAACTCTTGATTCTTATTCAATAAGAACTTTCTGCTTGCAAAATGCTTGCTTAATATTTTGTACTGCATCAACTTCTGCCAAATTGCCTAATGCATTACCGATGAGACCACTGGAATTGTTAGTCGTTGATGAAGCTGCTCAGCTTAAAGAATGTGAGTCTGCAATTCCTTTACAACTGTCTGGTATCCGCCATGCTATTCTAATAGGAGATGAGCGGCAACTCCCTGCTATGGTTAAAAGCGAGAGAGCGAAAGTGGCTGAGTTTGGAAGAAGCTTGTTCGAAAGGATGACAAAGTTGGGACACAGGAAGCATCTTCTCAATATCCAATATAGGATGCATCCATCCATCAGCTTATTTCCAAATATGGAGTTCTATAACAATGAGATATTAGATGGTCCGAATGTCACTGAAAGAAGCTATCAGAGGTGCTTCCTCAAGGGAAAGATGTACCAATCTTACTCCTTCATAAATATAGCCAATGGAAAAGAAGAATTTGATCATGGTCATAGTCAGAAAAATATGGTCGAGGTTGCTGTGGTCTCTGAGATAGTTGCAAGACTTTACCAAGGAAGTTTGTATATAAATATACAAAACCTAGTTCTTGTTAATTTTCTTTTCTTGGCTGCAGAATTCATCGGCACCAAGAAGAAGGTTAGTATTGGAGTCATATCACCATACAAGGCTCAAGTTTATGCAATTCAAGAGGGTGTGAAAAAATACAGTAAAAAGTGTAACCCTCAATTCTCTGTAAGTGTGCGGTCTGTTGATGGGTTCCAAGGTGGTGAAGAGGATGTGATAATTATCTCCACTGTCAGATGTAACGTGAAAGGTGCAATTGGTTTCTTGTCCAACTGTCAAAGGGCAAATGTTGCACTTACACGTGCACGGTATTGTCTTTGGATATTGGGGAATGCGTCGACTTTGGTTAACAGTGACTCTATCTGGAAGAAGCTAGTCCTTGATGCCAAGAGACGCGATTGTTTTCACAATGCTGACGAGGACAAGAACTTGGCACAGGCTATTGCTGCTGCCCTGCTGGAGGTTGACCGATTTCATGCTCTACTTAGTATTGAATCTCTGCTGTTCAAAAATGCGAGATGGAAGGTTTGCTTCACTGATGAATTTGAGAAATCATTAGCAAAGATTAAAGACACTCTGGTTCGTCGAGAAGTGCTTAATCTACTAACGAAGCTTTCAAGTGGATGGCGTCACGCACACAAGGATAAGGGAATGATGGTTCATGACGGGACTTCTTCTCAACTGTTAGAGAAGTATAAAGTCAATAGGCTGCTGAATCTCATTTGGACTGTGGATATTCTTCAGGAGAAATCATATTACATCCAGGTTATGAAGGTTTGGGATATCGTGACATCTTCGGATATACCTAGACTAGCAAAGCGTCTTGACAACATTTTTGGGACTTATACAGTGGATAAGATGAATCGTTGCAAGCACAAGTGTATTGATAAGTGCACTGCTGTTCCAATGAGATGGCCGGTGGATTCTAGTAGTTGCCATGAAGCTGATCCTGTGGAGTTCCTTTCAAAACCATTATCTTCACTCAGTCTAACAGATAAACCCGAATCATCAACATCAACTTCTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

760

Amino Acids

86.13

Weight (kDa)

9.3

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_11 PF13086 230 - 305 4.9e-15 AAA domain
AAA_12 PF13087 313 - 529 1.4e-53 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1310
AccBSI CCGCTC 1 cut(s) 886
AccI GTMKAC 2 cut(s) 121, 1589
AccII CGCG 1 cut(s) 1647
AciI CCGC 3 cut(s) 859, 886, 1429
AclWI GGATC 3 cut(s) 67, 347, 2192
AcoI YGGCCR 1 cut(s) 2165
AcsI RAATTY 5 cut(s) 427, 656, 1163, 1301, 1793
AcuI CTGAAG 4 cut(s) 431, 485, 659, 1976
AcvI CACGTG 1 cut(s) 1553
AcyI GRCGYC 1 cut(s) 1879
AfaI GTAC 5 cut(s) 146, 319, 434, 733, 1121
AfiI CCNNNNNNNGG 4 cut(s) 21, 86, 901, 1711
AflIII ACRYGT 1 cut(s) 1550
AgsI TTSAA 9 cut(s) 111, 396, 577, 690, 1373, 1745, 1759, 1869, 2217
AjnI CCWGG 1 cut(s) 2013
AloI GAACNNNNNNTCC 2 cut(s) 1893, 1925
Alw21I GWGCWC 5 cut(s) 193, 247, 301, 1558, 2147
Alw26I GTCTC 3 cut(s) 769, 1216, 1636
Alw44I GTGCAC 2 cut(s) 1554, 2143
AlwI GGATC 3 cut(s) 67, 347, 2192
AoxI GGCC 2 cut(s) 77, 2165
ApaLI GTGCAC 2 cut(s) 1554, 2143
ApeKI GCWGC 5 cut(s) 806, 1295, 1697, 1700, 1960
ApoI RAATTY 5 cut(s) 427, 656, 1163, 1301, 1793
ArsI GACNNNNNNTTYG 2 cut(s) 2069, 2101
AspS9I GGNCC 2 cut(s) 78, 1067
AsuHPI GGTGA 2 cut(s) 1335, 1466
AsuII TTCGAA 1 cut(s) 951
AvaII GGWCC 1 cut(s) 1067
BaeGI GKGCMC 2 cut(s) 1558, 2147
BanI GGYRCC 1 cut(s) 1310
BbrPI CACGTG 1 cut(s) 1553
Bbv12I GWGCWC 5 cut(s) 193, 247, 301, 1558, 2147
BbvI GCAGC 5 cut(s) 793, 1282, 1684, 1687, 1947
BccI CCATC 9 cut(s) 84, 1021, 1025, 1058, 1433, 1764, 1869, 1900, 2157
BciT130I CCWGG 1 cut(s) 2015
BciVI GTATCC 1 cut(s) 866
BclI TGATCA 1 cut(s) 1168
BcoDI GTCTC 3 cut(s) 769, 1216, 1636
BfaI CTAG 5 cut(s) 1268, 1625, 2058, 2063, 2178
BfmI CTRYAG 1 cut(s) 1296
BfuI GTATCC 1 cut(s) 866
BglII AGATCT 1 cut(s) 414
BisI GCNGC 6 cut(s) 807, 887, 1296, 1698, 1701, 1961
BlpI GCTNAGC 1 cut(s) 810
BlsI GCNGC 6 cut(s) 808, 888, 1297, 1699, 1702, 1962
BmcAI AGTACT 1 cut(s) 146
Bme1390I CCNGG 1 cut(s) 2015
Bme18I GGWCC 1 cut(s) 1067
BmgT120I GGNCC 2 cut(s) 78, 1067
BmiI GGNNCC 3 cut(s) 132, 1312, 1445
BmrFI CCNGG 1 cut(s) 2015
BmsI GCATC 6 cut(s) 535, 746, 991, 996, 1018, 1624
BpmI CTGGAG 1 cut(s) 1730
Bpu10I CCTNAGC 1 cut(s) 543
Bpu1102I GCTNAGC 1 cut(s) 810
Bpu14I TTCGAA 1 cut(s) 951
BpuEI CTTGAG 8 cut(s) 40, 146, 177, 231, 285, 488, 1091, 1341
Bsa29I ATCGAT 1 cut(s) 62
BsaAI YACGTR 1 cut(s) 1553
BsaBI GATNNNNATC 1 cut(s) 1472
BsaHI GRCGYC 1 cut(s) 1879
BsaI GGTCTC 2 cut(s) 769, 1216
BsaJI CCNNGG 2 cut(s) 1237, 1447
Bsc4I CCNNNNNNNGG 4 cut(s) 21, 86, 901, 1711
Bse118I RCCGGY 1 cut(s) 2167
Bse1I ACTGG 1 cut(s) 786
Bse8I GATNNNNATC 1 cut(s) 1472
BseBI CCWGG 1 cut(s) 2015
BseCI ATCGAT 1 cut(s) 62
BseDI CCNNGG 2 cut(s) 1237, 1447
BseJI GATNNNNATC 1 cut(s) 1472
BseLI CCNNNNNNNGG 4 cut(s) 21, 86, 901, 1711
BseMII CTCAG 5 cut(s) 665, 824, 921, 1206, 2248
BseNI ACTGG 1 cut(s) 786
BseRI GAGGAG 1 cut(s) 383
BseSI GKGCMC 2 cut(s) 1558, 2147
BseXI GCAGC 5 cut(s) 793, 1282, 1684, 1687, 1947
Bsh1236I CGCG 1 cut(s) 1647
Bsh1285I CGRYCG 1 cut(s) 601
BshFI GGCC 2 cut(s) 79, 2167
BshNI GGYRCC 1 cut(s) 1310
BshVI ATCGAT 1 cut(s) 62
BsiEI CGRYCG 1 cut(s) 601
BsiHKAI GWGCWC 5 cut(s) 193, 247, 301, 1558, 2147
BsiSI CCGG 1 cut(s) 2168
BslFI GGGAC 4 cut(s) 650, 984, 1933, 2104
BslI CCNNNNNNNGG 4 cut(s) 21, 86, 901, 1711
BsmAI GTCTC 3 cut(s) 769, 1216, 1636
BsmBI CGTCTC 1 cut(s) 1636
BsmFI GGGAC 4 cut(s) 650, 984, 1933, 2104
BsmI GAATGC 2 cut(s) 456, 1588
BsnI GGCC 2 cut(s) 79, 2167
Bso31I GGTCTC 2 cut(s) 769, 1216
Bsp119I TTCGAA 1 cut(s) 951
Bsp1286I GDGCHC 5 cut(s) 193, 247, 301, 1558, 2147
Bsp1407I TGTACA 1 cut(s) 432
Bsp143I GATC 7 cut(s) 33, 59, 63, 352, 414, 1168, 2197
Bsp1720I GCTNAGC 1 cut(s) 810
BspACI CCGC 3 cut(s) 859, 886, 1429
BspANI GGCC 2 cut(s) 79, 2167
BspCNI CTCAG 5 cut(s) 664, 823, 922, 1207, 2247
BspDI ATCGAT 1 cut(s) 62
BspFNI CGCG 1 cut(s) 1647
BspHI TCATGA 1 cut(s) 1912
BspLI GGNNCC 3 cut(s) 132, 1312, 1445
BspMAI CTGCAG 1 cut(s) 1300
BspPI GGATC 3 cut(s) 67, 347, 2192
BspT104I TTCGAA 1 cut(s) 951
BspT107I GGYRCC 1 cut(s) 1310
BspTNI GGTCTC 2 cut(s) 769, 1216
BsrBI CCGCTC 1 cut(s) 886
BsrFI RCCGGY 1 cut(s) 2167
BsrGI TGTACA 1 cut(s) 432
BsrI ACTGG 1 cut(s) 786
BssAI RCCGGY 1 cut(s) 2167
BssECI CCNNGG 2 cut(s) 1237, 1447
BssMI GATC 7 cut(s) 33, 59, 63, 352, 414, 1168, 2197
BssNI GRCGYC 1 cut(s) 1879
BssT1I CCWWGG 2 cut(s) 1237, 1447
Bst2UI CCWGG 1 cut(s) 2015
Bst6I CTCTTC 2 cut(s) 135, 1452
BstACI GRCGYC 1 cut(s) 1879
BstAPI GCANNNNNTGC 1 cut(s) 1541
BstAUI TGTACA 1 cut(s) 432
BstBAI YACGTR 1 cut(s) 1553
BstBI TTCGAA 1 cut(s) 951
BstC8I GCNNGC 3 cut(s) 707, 718, 2123
BstDEI CTNAG 8 cut(s) 543, 559, 651, 810, 930, 1215, 1736, 2234
BstENI CCTNNNNNAGG 2 cut(s) 19, 1709
BstFNI CGCG 1 cut(s) 1647
BstKTI GATC 7 cut(s) 36, 62, 66, 355, 417, 1171, 2200
BstMAI GTCTC 3 cut(s) 769, 1216, 1636
BstMBI GATC 7 cut(s) 33, 59, 63, 352, 414, 1168, 2197
BstMCI CGRYCG 1 cut(s) 601
BstMWI GCNNNNNNNGC 3 cut(s) 926, 1541, 1697
BstNI CCWGG 1 cut(s) 2015
BstSCI CCNGG 1 cut(s) 2013
BstSFI CTRYAG 1 cut(s) 1296
BstSLI GKGCMC 2 cut(s) 1558, 2147
BstUI CGCG 1 cut(s) 1647
BstV1I GCAGC 5 cut(s) 793, 1282, 1684, 1687, 1947
BstX2I RGATCY 1 cut(s) 414
BstXI CCANNNNNNTGG 1 cut(s) 2163
BstYI RGATCY 1 cut(s) 414
Bsu15I ATCGAT 1 cut(s) 62
BsuI GTATCC 1 cut(s) 866
BsuRI GGCC 2 cut(s) 79, 2167
BsuTUI ATCGAT 1 cut(s) 62
BtsI GCAGTG 1 cut(s) 2145
Cac8I GCNNGC 3 cut(s) 707, 718, 2123
CciI TCATGA 1 cut(s) 1912
Cfr10I RCCGGY 1 cut(s) 2167
Cfr13I GGNCC 2 cut(s) 78, 1067
ClaI ATCGAT 1 cut(s) 62
CseI GACGC 4 cut(s) 1575, 1653, 1868, 2060
Csp6I GTAC 5 cut(s) 145, 318, 433, 732, 1120
CspCI CAANNNNNGTGG 2 cut(s) 768, 803
CviAII CATG 8 cut(s) 421, 481, 523, 863, 1172, 1727, 1913, 2189
CviQI GTAC 5 cut(s) 145, 318, 433, 732, 1120
DdeI CTNAG 8 cut(s) 543, 559, 651, 810, 930, 1215, 1736, 2234
DpnI GATC 7 cut(s) 35, 61, 65, 354, 416, 1170, 2199
DpnII GATC 7 cut(s) 33, 59, 63, 352, 414, 1168, 2197
DraI TTTAAA 1 cut(s) 555
EaeI YGGCCR 1 cut(s) 2165
Eam1104I CTCTTC 2 cut(s) 135, 1452
EarI CTCTTC 2 cut(s) 135, 1452
EciI GGCGGA 1 cut(s) 848
Eco130I CCWWGG 2 cut(s) 1237, 1447
Eco31I GGTCTC 2 cut(s) 769, 1216
Eco32I GATATC 1 cut(s) 2035
Eco47I GGWCC 1 cut(s) 1067
Eco57I CTGAAG 4 cut(s) 431, 485, 659, 1976
Eco72I CACGTG 1 cut(s) 1553
EcoNI CCTNNNNNAGG 2 cut(s) 19, 1709
EcoO109I RGGNCCY 1 cut(s) 78
EcoRI GAATTC 1 cut(s) 1301
EcoRII CCWGG 1 cut(s) 2013
EcoRV GATATC 1 cut(s) 2035
EcoT14I CCWWGG 2 cut(s) 1237, 1447
EcoT22I ATGCAT 3 cut(s) 528, 766, 1011
ErhI CCWWGG 2 cut(s) 1237, 1447
Esp3I CGTCTC 1 cut(s) 1636
FaeI CATG 8 cut(s) 424, 484, 526, 866, 1175, 1730, 1916, 2192
FalI AAGNNNNNCTT 3 cut(s) 31, 1766, 1798
FaqI GGGAC 4 cut(s) 650, 984, 1933, 2104
FatI CATG 8 cut(s) 420, 480, 522, 862, 1171, 1726, 1912, 2188
FbaI TGATCA 1 cut(s) 1168
FblI GTMKAC 2 cut(s) 121, 1589
Fnu4HI GCNGC 6 cut(s) 807, 887, 1296, 1698, 1701, 1961
Fsp4HI GCNGC 6 cut(s) 807, 887, 1296, 1698, 1701, 1961
FspBI CTAG 5 cut(s) 1268, 1625, 2058, 2063, 2178
GluI GCNGC 6 cut(s) 807, 887, 1296, 1698, 1701, 1961
GsuI CTGGAG 1 cut(s) 1730
HaeIII GGCC 2 cut(s) 79, 2167
HapII CCGG 1 cut(s) 2168
HgaI GACGC 4 cut(s) 1575, 1653, 1868, 2060
Hin1I GRCGYC 1 cut(s) 1879
Hin1II CATG 8 cut(s) 424, 484, 526, 866, 1175, 1730, 1916, 2192
HincII GTYRAC 3 cut(s) 1590, 1600, 1717
HindII GTYRAC 3 cut(s) 1590, 1600, 1717
HindIII AAGCTT 3 cut(s) 489, 943, 1862
HpaI GTTAAC 1 cut(s) 1600
HpaII CCGG 1 cut(s) 2168
HphI GGTGA 2 cut(s) 1335, 1466
Hpy166II GTNNAC 8 cut(s) 122, 435, 635, 1556, 1590, 1600, 1717, 2145
Hpy188I TCNGA 7 cut(s) 654, 1071, 1095, 1185, 1216, 1487, 2050
Hpy8I GTNNAC 8 cut(s) 122, 435, 635, 1556, 1590, 1600, 1717, 2145
Hpy99I CGWCG 2 cut(s) 1591, 1839
HpyAV CCTTC 9 cut(s) 25, 307, 460, 469, 542, 1144, 1315, 1768, 2017
HpyCH4IV ACGT 4 cut(s) 118, 362, 1494, 1552
HpyF10VI GCNNNNNNNGC 3 cut(s) 926, 1541, 1697
HpyF3I CTNAG 8 cut(s) 543, 559, 651, 810, 930, 1215, 1736, 2234
HpySE526I ACGT 4 cut(s) 118, 362, 1494, 1552
Hsp92I GRCGYC 1 cut(s) 1879
Hsp92II CATG 8 cut(s) 424, 484, 526, 866, 1175, 1730, 1916, 2192
Ksp22I TGATCA 1 cut(s) 1168
KspAI GTTAAC 1 cut(s) 1600
Kzo9I GATC 7 cut(s) 33, 59, 63, 352, 414, 1168, 2197
Lsp1109I GCAGC 5 cut(s) 793, 1282, 1684, 1687, 1947
LweI GCATC 6 cut(s) 535, 746, 991, 996, 1018, 1624
MaeI CTAG 5 cut(s) 1268, 1625, 2058, 2063, 2178
MaeII ACGT 4 cut(s) 118, 362, 1494, 1552
MaeIII GTNAC 7 cut(s) 405, 1075, 1403, 1490, 1604, 1880, 2038
MalI GATC 7 cut(s) 35, 61, 65, 354, 416, 1170, 2199
MbiI CCGCTC 1 cut(s) 886
MboI GATC 7 cut(s) 33, 59, 63, 352, 414, 1168, 2197
MfeI CAATTG 2 cut(s) 67, 1506
MflI RGATCY 1 cut(s) 414
MhlI GDGCHC 5 cut(s) 193, 247, 301, 1558, 2147
MlyI GAGTC 4 cut(s) 413, 836, 1344, 1601
MmeI TCCRAC 1 cut(s) 1545
Mph1103I ATGCAT 3 cut(s) 528, 766, 1011
MspI CCGG 1 cut(s) 2168
MspR9I CCNGG 1 cut(s) 2015
MssI GTTTAAAC 1 cut(s) 555
MunI CAATTG 2 cut(s) 67, 1506
Mva1269I GAATGC 2 cut(s) 456, 1588
MvaI CCWGG 1 cut(s) 2015
MvnI CGCG 1 cut(s) 1647
MwoI GCNNNNNNNGC 3 cut(s) 926, 1541, 1697
NdeII GATC 7 cut(s) 33, 59, 63, 352, 414, 1168, 2197
NlaIII CATG 8 cut(s) 424, 484, 526, 866, 1175, 1730, 1916, 2192
NlaIV GGNNCC 3 cut(s) 132, 1312, 1445
NmuCI GTSAC 5 cut(s) 405, 1075, 1604, 1880, 2038
NsiI ATGCAT 3 cut(s) 528, 766, 1011
NspV TTCGAA 1 cut(s) 951
PagI TCATGA 1 cut(s) 1912
PctI GAATGC 2 cut(s) 456, 1588
PfeI GAWTC 7 cut(s) 392, 680, 1745, 1966, 2113, 2174, 2255
PkrI GCNGC 6 cut(s) 808, 888, 1297, 1699, 1702, 1962
PleI GAGTC 4 cut(s) 412, 835, 1343, 1601
PmaCI CACGTG 1 cut(s) 1553
PmeI GTTTAAAC 1 cut(s) 555
PmlI CACGTG 1 cut(s) 1553
PpsI GAGTC 4 cut(s) 412, 835, 1343, 1601
Ppu21I YACGTR 1 cut(s) 1553
Psp6I CCWGG 1 cut(s) 2013
PspCI CACGTG 1 cut(s) 1553
PspGI CCWGG 1 cut(s) 2013
PspN4I GGNNCC 3 cut(s) 132, 1312, 1445
PspPI GGNCC 2 cut(s) 78, 1067
PstI CTGCAG 1 cut(s) 1300
PsuI RGATCY 1 cut(s) 414
RsaI GTAC 5 cut(s) 146, 319, 434, 733, 1121
RsaNI GTAC 5 cut(s) 145, 318, 433, 732, 1120
SalI GTCGAC 1 cut(s) 1588
SatI GCNGC 6 cut(s) 807, 887, 1296, 1698, 1701, 1961
Sau3AI GATC 7 cut(s) 33, 59, 63, 352, 414, 1168, 2197
Sau96I GGNCC 2 cut(s) 78, 1067
ScaI AGTACT 1 cut(s) 146
SchI GAGTC 4 cut(s) 413, 836, 1344, 1601
ScrFI CCNGG 1 cut(s) 2015
SduI GDGCHC 5 cut(s) 193, 247, 301, 1558, 2147
SfaNI GCATC 6 cut(s) 535, 746, 991, 996, 1018, 1624
SfcI CTRYAG 1 cut(s) 1296
SfuI TTCGAA 1 cut(s) 951
SinI GGWCC 1 cut(s) 1067
SmlI CTYRAG 8 cut(s) 19, 125, 192, 246, 300, 503, 1106, 1356
SmoI CTYRAG 8 cut(s) 19, 125, 192, 246, 300, 503, 1106, 1356
SsiI CCGC 3 cut(s) 859, 886, 1429
SspI AATATT 1 cut(s) 726
SspMI CTAG 5 cut(s) 1268, 1625, 2058, 2063, 2178
StyD4I CCNGG 1 cut(s) 2013
StyI CCWWGG 2 cut(s) 1237, 1447
TaiI ACGT 4 cut(s) 121, 365, 1497, 1555
TaqI TCGA 6 cut(s) 32, 62, 951, 1197, 1589, 1837
TaqII GACCGA 2 cut(s) 587, 1734
TatI WGTACW 3 cut(s) 144, 432, 731
TauI GCSGC 1 cut(s) 889
TfiI GAWTC 7 cut(s) 392, 680, 1745, 1966, 2113, 2174, 2255
TseFI GTSAC 5 cut(s) 405, 1075, 1604, 1880, 2038
TseI GCWGC 5 cut(s) 806, 1295, 1697, 1700, 1960
Tsp45I GTSAC 5 cut(s) 405, 1075, 1604, 1880, 2038
VneI GTGCAC 2 cut(s) 1554, 2143
VpaK11BI GGWCC 1 cut(s) 1067
XagI CCTNNNNNAGG 2 cut(s) 19, 1709
XapI RAATTY 5 cut(s) 427, 656, 1163, 1301, 1793
XmiI GTMKAC 2 cut(s) 121, 1589
XspI CTAG 5 cut(s) 1268, 1625, 2058, 2063, 2178
ZrmI AGTACT 1 cut(s) 146
Zsp2I ATGCAT 3 cut(s) 528, 766, 1011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.