Rorug06G0015400

AAA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000279
Physical Location & Seq
Forward (+)
2007524 .. 2010297
2774 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0015400.1

Sequence Viewer

Length: 1539 bp
ATGTTGCCAAGGAGCCGAACTCTTCCGAGCAGAATCCACCATGGAGCTGTGGAGGAGAGGCATGATATCAGGCACTATTTGCAAGTAGAAGTTCAACCTAAAGTCACTGAATCTGAAGCTATAAACCCTCAGTCCAACTATTCCAAATGCTTCGACGATGATGGTCGCTTGAAGCGAACAGGAACTTTTTGGACTGCAACATCACATATTATCACTGCAGTTATAGGATCTGGAGTTCTTTCTTTAGCATGGGCAATTGCACAACTTGGTTGGGTTGCAGGACCAACTGTCCTCGCTCTTTTTGCCATTGTCAATCTGTACACTTCCAATCTCCTATCCATGTGCTACCGGGCCGGGGACCCTGTCACGGGACAGAGAAACTATACCTATATGGATGCTGTCAAGGCCAACTTAGGAGGAAGAAAAGTTATGTTATGTGGTTTAGTCCAGTACTTGAATTTGTTTGGGGTAGCAATTGGATATACCATTGCATCTTCTGTCAGCATGATGGCAATAAAGAGATCAAACTGCTACCACAAAAGTGGAGGGAAAGATCCATGCCATATGTCTAGCAATGGTTATATGATAACATTTGGAATCATAGAGGTGATATTTTCACAAATCAAAGATTTCAATGAAGTATGGTGGCTCTCAATAGTAGCAGCCATTATGTCATTCACATACTCCACTGTCGGCCTTGGACTTGGCATTGGTAAAGTTGCAGGAAATGGGGATTTTAAAGGAAGCCTGTTGGGTATTAGCATAGGGACAGTTACTCATTCTGGAGCAGTAGTCACTTCTACAGAAAAGATGTGGAGGACTATGCAAGCTTTTGGAGCTATTGCATTTGCTTACTCTTATTCTTTGGTCCTCATAGAAATTCAGGATACTATAAGATCTCCTCCTGCAGAACATAAGACCATGAAGAAGGCAACTGTATTCAGCATCACTGTCACAACAGTGTTCTATATGCTCTGTGGATGCTTTGGGTATGCAGCGTTTGGCGATCTTGCCCCAGGAAACCTCTTAACTGGCTTTGGATTCTACAACCCCTACTGGCTTCTAGACATTGCAAATGTTGCAATTGTTGTCCACCTAGTAGGTGCATTTCAGGTCTTTTGCCAGCCATTATTTGCATTTGTGGAGAAGTGGAGTGCACAAAAGTGGCCGAAAAGCGACTTTGTGACAGCCGAGTATGATATACCTATCCCTTTCTATGGTGTGTACCAACTCAACCTGTTTCGCTTGGTATGGAGGACCATGTTTGTTATATTGACTACCCTTATATCCATGCTCCTACCATTCTTCAATGATGTTGTTGGGATACTTGGAGCCTTTGGATTCTGGCCATTGACTGTTTATTTTCCGGTTGAGATGTACATTGCTCAACAGAAGATTGAGAGATGGAGTAGTAGATGGCTTGGACTTCAGATACTGAGTGTGAGTTGTCTCTTTGTCTCCATAGTTGCTGCTGTTGGCTCTGTTGCCGGCGTAGTTCTAGATCTGAAGACGTATAAACCCTTCAAAACTACTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

512

Amino Acids

56.72

Weight (kDa)

8.95

Isoelectric Point (pI)

37.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 59 - 499 3.1e-116 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 235, 548
AcoI YGGCCR 2 cut(s) 1166, 1346
AcsI RAATTY 2 cut(s) 457, 879
AcuI CTGAAG 3 cut(s) 135, 1412, 1526
AfaI GTAC 4 cut(s) 320, 452, 1226, 1379
AfiI CCNNNNNNNGG 4 cut(s) 355, 367, 368, 1217
AgsI TTSAA 6 cut(s) 95, 172, 457, 634, 1309, 1525
AhdI GACNNNNNGTC 1 cut(s) 287
AjnI CCWGG 1 cut(s) 1015
AleI CACNNNNGTG 3 cut(s) 540, 959, 1162
AloI GAACNNNNNNTCC 2 cut(s) 219, 251
AluBI AGCT 4 cut(s) 47, 119, 830, 839
AluI AGCT 4 cut(s) 47, 119, 830, 839
Alw21I GWGCWC 1 cut(s) 1159
Alw26I GTCTC 2 cut(s) 1454, 1462
Alw44I GTGCAC 1 cut(s) 1155
AlwI GGATC 2 cut(s) 235, 548
AlwNI CAGNNNCTG 1 cut(s) 1435
AoxI GGCC 5 cut(s) 351, 405, 694, 1166, 1346
ApaLI GTGCAC 1 cut(s) 1155
ApeKI GCWGC 3 cut(s) 662, 995, 1469
ApoI RAATTY 2 cut(s) 457, 879
AspS9I GGNCC 5 cut(s) 281, 351, 358, 868, 1257
AsuC2I CCSGG 2 cut(s) 350, 355
AsuHPI GGTGA 1 cut(s) 619
AvaII GGWCC 4 cut(s) 281, 358, 868, 1257
BaeGI GKGCMC 1 cut(s) 1159
BalI TGGCCA 1 cut(s) 1348
BarI GAAGNNNNNNTAC 2 cut(s) 1505, 1537
BbsI GAAGAC 1 cut(s) 1514
Bbv12I GWGCWC 1 cut(s) 1159
BbvI GCAGC 3 cut(s) 674, 1007, 1456
BccI CCATC 4 cut(s) 155, 502, 1398, 1410
BciT130I CCWGG 1 cut(s) 1017
BciVI GTATCC 2 cut(s) 880, 1317
BcnI CCSGG 2 cut(s) 350, 355
BcoDI GTCTC 2 cut(s) 1454, 1462
BfaI CTAG 4 cut(s) 570, 1064, 1097, 1499
BfmI CTRYAG 3 cut(s) 216, 801, 906
BfuI GTATCC 2 cut(s) 880, 1317
BglII AGATCT 2 cut(s) 896, 1501
BisI GCNGC 3 cut(s) 663, 996, 1470
BlsI GCNGC 3 cut(s) 664, 997, 1471
BmcAI AGTACT 1 cut(s) 452
Bme1390I CCNGG 3 cut(s) 350, 355, 1017
Bme18I GGWCC 4 cut(s) 281, 358, 868, 1257
BmeRI GACNNNNNGTC 1 cut(s) 287
BmgT120I GGNCC 5 cut(s) 281, 351, 358, 868, 1257
BmiI GGNNCC 4 cut(s) 14, 359, 360, 1333
BmrFI CCNGG 3 cut(s) 350, 355, 1017
BmsI GCATC 4 cut(s) 385, 500, 954, 971
BpiI GAAGAC 1 cut(s) 1514
BplI GAGNNNNNCTC 1 cut(s) 36
BpmI CTGGAG 2 cut(s) 252, 804
BpuMI CCSGG 2 cut(s) 350, 355
BsaJI CCNNGG 5 cut(s) 8, 40, 354, 697, 1015
BsaWI WCCGGW 1 cut(s) 1366
BsaXI ACNNNNNCTCC 2 cut(s) 777, 807
Bsc4I CCNNNNNNNGG 4 cut(s) 355, 367, 368, 1217
Bse118I RCCGGY 1 cut(s) 1487
Bse1I ACTGG 3 cut(s) 448, 1036, 1061
Bse3DI GCAATG 4 cut(s) 486, 580, 1068, 1380
BseBI CCWGG 1 cut(s) 1017
BseDI CCNNGG 5 cut(s) 8, 40, 354, 697, 1015
BseGI GGATG 2 cut(s) 400, 986
BseLI CCNNNNNNNGG 4 cut(s) 355, 367, 368, 1217
BseMI GCAATG 4 cut(s) 486, 580, 1068, 1380
BseMII CTCAG 2 cut(s) 143, 1427
BseNI ACTGG 3 cut(s) 448, 1036, 1061
BseRI GAGGAG 2 cut(s) 68, 891
BseSI GKGCMC 1 cut(s) 1159
BseXI GCAGC 3 cut(s) 674, 1007, 1456
BshFI GGCC 5 cut(s) 353, 407, 696, 1168, 1348
BsiHKAI GWGCWC 1 cut(s) 1159
BsiSI CCGG 4 cut(s) 349, 354, 1367, 1488
BslFI GGGAC 3 cut(s) 371, 384, 781
BslI CCNNNNNNNGG 4 cut(s) 355, 367, 368, 1217
BsmAI GTCTC 2 cut(s) 1454, 1462
BsmFI GGGAC 3 cut(s) 371, 384, 781
BsnI GGCC 5 cut(s) 353, 407, 696, 1168, 1348
Bsp1286I GDGCHC 1 cut(s) 1159
Bsp1407I TGTACA 2 cut(s) 318, 1377
Bsp143I GATC 6 cut(s) 227, 521, 553, 896, 1006, 1501
Bsp19I CCATGG 1 cut(s) 40
BspANI GGCC 5 cut(s) 353, 407, 696, 1168, 1348
BspCNI CTCAG 2 cut(s) 142, 1428
BspLI GGNNCC 4 cut(s) 14, 359, 360, 1333
BspMAI CTGCAG 2 cut(s) 220, 910
BspPI GGATC 2 cut(s) 235, 548
BsrDI GCAATG 4 cut(s) 486, 580, 1068, 1380
BsrFI RCCGGY 1 cut(s) 1487
BsrGI TGTACA 2 cut(s) 318, 1377
BsrI ACTGG 3 cut(s) 448, 1036, 1061
BssAI RCCGGY 1 cut(s) 1487
BssECI CCNNGG 5 cut(s) 8, 40, 354, 697, 1015
BssMI GATC 6 cut(s) 227, 521, 553, 896, 1006, 1501
BssT1I CCWWGG 3 cut(s) 8, 40, 697
Bst2UI CCWGG 1 cut(s) 1017
Bst4CI ACNGT 7 cut(s) 289, 691, 772, 937, 952, 961, 1357
Bst6I CTCTTC 1 cut(s) 27
BstAPI GCANNNNNTGC 2 cut(s) 79, 1079
BstAUI TGTACA 2 cut(s) 318, 1377
BstC8I GCNNGC 3 cut(s) 828, 1124, 1489
BstDEI CTNAG 3 cut(s) 129, 412, 1436
BstDSI CCRYGG 1 cut(s) 40
BstF5I GGATG 2 cut(s) 400, 986
BstKTI GATC 6 cut(s) 230, 524, 556, 899, 1009, 1504
BstMAI GTCTC 2 cut(s) 1454, 1462
BstMBI GATC 6 cut(s) 227, 521, 553, 896, 1006, 1501
BstMWI GCNNNNNNNGC 5 cut(s) 79, 302, 404, 836, 1079
BstNI CCWGG 1 cut(s) 1017
BstSCI CCNGG 3 cut(s) 348, 353, 1015
BstSFI CTRYAG 3 cut(s) 216, 801, 906
BstSLI GKGCMC 1 cut(s) 1159
BstV1I GCAGC 3 cut(s) 674, 1007, 1456
BstV2I GAAGAC 1 cut(s) 1514
BstX2I RGATCY 4 cut(s) 227, 553, 896, 1501
BstXI CCANNNNNNTGG 1 cut(s) 542
BstYI RGATCY 4 cut(s) 227, 553, 896, 1501
BsuI GTATCC 2 cut(s) 880, 1317
BsuRI GGCC 5 cut(s) 353, 407, 696, 1168, 1348
BtgI CCRYGG 1 cut(s) 40
BtsCI GGATG 2 cut(s) 400, 986
BtsI GCAGTG 1 cut(s) 213
BtsIMutI CAGTG 5 cut(s) 105, 213, 687, 948, 966
Cac8I GCNNGC 3 cut(s) 828, 1124, 1489
CaiI CAGNNNCTG 1 cut(s) 1435
Cfr10I RCCGGY 1 cut(s) 1487
Cfr13I GGNCC 5 cut(s) 281, 351, 358, 868, 1257
Csp6I GTAC 4 cut(s) 319, 451, 1225, 1378
CviAII CATG 9 cut(s) 41, 62, 249, 340, 505, 558, 922, 1261, 1291
CviQI GTAC 4 cut(s) 319, 451, 1225, 1378
DdeI CTNAG 3 cut(s) 129, 412, 1436
DpnI GATC 6 cut(s) 229, 523, 555, 898, 1008, 1503
DpnII GATC 6 cut(s) 227, 521, 553, 896, 1006, 1501
DraI TTTAAA 1 cut(s) 739
DriI GACNNNNNGTC 1 cut(s) 287
EaeI YGGCCR 2 cut(s) 1166, 1346
Eam1104I CTCTTC 1 cut(s) 27
Eam1105I GACNNNNNGTC 1 cut(s) 287
EarI CTCTTC 1 cut(s) 27
Eco130I CCWWGG 3 cut(s) 8, 40, 697
Eco32I GATATC 1 cut(s) 67
Eco47I GGWCC 4 cut(s) 281, 358, 868, 1257
Eco57I CTGAAG 3 cut(s) 135, 1412, 1526
EcoO109I RGGNCCY 1 cut(s) 358
EcoRII CCWGG 1 cut(s) 1015
EcoRV GATATC 1 cut(s) 67
EcoT14I CCWWGG 3 cut(s) 8, 40, 697
ErhI CCWWGG 3 cut(s) 8, 40, 697
FaeI CATG 9 cut(s) 44, 65, 252, 343, 508, 561, 925, 1264, 1294
FalI AAGNNNNNCTT 2 cut(s) 395, 427
FaqI GGGAC 3 cut(s) 371, 384, 781
FatI CATG 9 cut(s) 40, 61, 248, 339, 504, 557, 921, 1260, 1290
FauNDI CATATG 1 cut(s) 564
Fnu4HI GCNGC 3 cut(s) 663, 996, 1470
FokI GGATG 2 cut(s) 407, 993
Fsp4HI GCNGC 3 cut(s) 663, 996, 1470
FspBI CTAG 4 cut(s) 570, 1064, 1097, 1499
GluI GCNGC 3 cut(s) 663, 996, 1470
GsuI CTGGAG 2 cut(s) 252, 804
HaeIII GGCC 5 cut(s) 353, 407, 696, 1168, 1348
HapII CCGG 4 cut(s) 349, 354, 1367, 1488
Hin1II CATG 9 cut(s) 44, 65, 252, 343, 508, 561, 925, 1264, 1294
HindIII AAGCTT 1 cut(s) 828
HinfI GANTC 5 cut(s) 33, 110, 597, 1041, 1341
HpaII CCGG 4 cut(s) 349, 354, 1367, 1488
HphI GGTGA 1 cut(s) 619
Hpy166II GTNNAC 4 cut(s) 321, 1093, 1157, 1225
Hpy188I TCNGA 4 cut(s) 27, 115, 1431, 1506
Hpy188III TCNNGA 5 cut(s) 231, 783, 884, 1064, 1499
Hpy8I GTNNAC 4 cut(s) 321, 1093, 1157, 1225
Hpy99I CGWCG 1 cut(s) 158
HpyAV CCTTC 2 cut(s) 922, 1531
HpyCH4III ACNGT 7 cut(s) 289, 691, 772, 937, 952, 961, 1357
HpyCH4IV ACGT 1 cut(s) 1511
HpyF10VI GCNNNNNNNGC 5 cut(s) 79, 302, 404, 836, 1079
HpyF3I CTNAG 3 cut(s) 129, 412, 1436
HpySE526I ACGT 1 cut(s) 1511
Hsp92II CATG 9 cut(s) 44, 65, 252, 343, 508, 561, 925, 1264, 1294
KflI GGGWCCC 1 cut(s) 358
KroI GCCGGC 1 cut(s) 1487
KroNI GCCGGC 1 cut(s) 1489
Kzo9I GATC 6 cut(s) 227, 521, 553, 896, 1006, 1501
LmnI GCTCC 6 cut(s) 12, 44, 785, 836, 1299, 1331
Lsp1109I GCAGC 3 cut(s) 674, 1007, 1456
LweI GCATC 4 cut(s) 385, 500, 954, 971
MaeI CTAG 4 cut(s) 570, 1064, 1097, 1499
MaeII ACGT 1 cut(s) 1511
MaeIII GTNAC 6 cut(s) 103, 364, 772, 793, 952, 1183
MalI GATC 6 cut(s) 229, 523, 555, 898, 1008, 1503
MboI GATC 6 cut(s) 227, 521, 553, 896, 1006, 1501
MboII GAAGA 7 cut(s) 14, 432, 486, 937, 1297, 1405, 1519
MfeI CAATTG 3 cut(s) 255, 474, 1083
MflI RGATCY 4 cut(s) 227, 553, 896, 1501
MhlI GDGCHC 1 cut(s) 1159
MlsI TGGCCA 1 cut(s) 1348
MluCI AATT 5 cut(s) 255, 457, 474, 879, 1083
MluNI TGGCCA 1 cut(s) 1348
MmeI TCCRAC 1 cut(s) 159
Mox20I TGGCCA 1 cut(s) 1348
MroNI GCCGGC 1 cut(s) 1487
MscI TGGCCA 1 cut(s) 1348
MseI TTAA 2 cut(s) 738, 1028
MslI CAYNNNNRTG 4 cut(s) 540, 605, 959, 1162
Msp20I TGGCCA 1 cut(s) 1348
MspI CCGG 4 cut(s) 349, 354, 1367, 1488
MspR9I CCNGG 3 cut(s) 350, 355, 1017
MunI CAATTG 3 cut(s) 255, 474, 1083
MvaI CCWGG 1 cut(s) 1017
MwoI GCNNNNNNNGC 5 cut(s) 79, 302, 404, 836, 1079
NaeI GCCGGC 1 cut(s) 1489
NciI CCSGG 2 cut(s) 350, 355
NcoI CCATGG 1 cut(s) 40
NdeI CATATG 1 cut(s) 564
NdeII GATC 6 cut(s) 227, 521, 553, 896, 1006, 1501
NgoMIV GCCGGC 1 cut(s) 1487
NlaIII CATG 9 cut(s) 44, 65, 252, 343, 508, 561, 925, 1264, 1294
NlaIV GGNNCC 4 cut(s) 14, 359, 360, 1333
NmeAIII GCCGAG 1 cut(s) 1216
NmuCI GTSAC 5 cut(s) 103, 364, 793, 952, 1183
OliI CACNNNNGTG 3 cut(s) 540, 959, 1162
PcsI WCGNNNNNNNCGW 1 cut(s) 172
PdiI GCCGGC 1 cut(s) 1489
PfeI GAWTC 5 cut(s) 33, 110, 597, 1041, 1341
PflFI GACNNNGTC 1 cut(s) 362
PkrI GCNGC 3 cut(s) 664, 997, 1471
PpuMI RGGWCCY 1 cut(s) 358
Psp5II RGGWCCY 1 cut(s) 358
Psp6I CCWGG 1 cut(s) 1015
PspGI CCWGG 1 cut(s) 1015
PspN4I GGNNCC 4 cut(s) 14, 359, 360, 1333
PspPI GGNCC 5 cut(s) 281, 351, 358, 868, 1257
PspPPI RGGWCCY 1 cut(s) 358
PstI CTGCAG 2 cut(s) 220, 910
PstNI CAGNNNCTG 1 cut(s) 1435
PsuI RGATCY 4 cut(s) 227, 553, 896, 1501
PsyI GACNNNGTC 1 cut(s) 362
RsaI GTAC 4 cut(s) 320, 452, 1226, 1379
RsaNI GTAC 4 cut(s) 319, 451, 1225, 1378
RseI CAYNNNNRTG 4 cut(s) 540, 605, 959, 1162
SaqAI TTAA 2 cut(s) 738, 1028
SatI GCNGC 3 cut(s) 663, 996, 1470
Sau3AI GATC 6 cut(s) 227, 521, 553, 896, 1006, 1501
Sau96I GGNCC 5 cut(s) 281, 351, 358, 868, 1257
ScaI AGTACT 1 cut(s) 452
ScrFI CCNGG 3 cut(s) 350, 355, 1017
SduI GDGCHC 1 cut(s) 1159
SfaNI GCATC 4 cut(s) 385, 500, 954, 971
SfcI CTRYAG 3 cut(s) 216, 801, 906
SinI GGWCC 4 cut(s) 281, 358, 868, 1257
SmiMI CAYNNNNRTG 4 cut(s) 540, 605, 959, 1162
Sse9I AATT 5 cut(s) 255, 457, 474, 879, 1083
SspMI CTAG 4 cut(s) 570, 1064, 1097, 1499
StyD4I CCNGG 3 cut(s) 348, 353, 1015
StyI CCWWGG 3 cut(s) 8, 40, 697
TaaI ACNGT 7 cut(s) 289, 691, 772, 937, 952, 961, 1357
TaiI ACGT 1 cut(s) 1514
TaqI TCGA 1 cut(s) 153
TasI AATT 5 cut(s) 255, 457, 474, 879, 1083
TatI WGTACW 3 cut(s) 318, 450, 1377
TfiI GAWTC 5 cut(s) 33, 110, 597, 1041, 1341
Tru1I TTAA 2 cut(s) 738, 1028
Tru9I TTAA 2 cut(s) 738, 1028
TscAI CASTG 5 cut(s) 112, 220, 694, 955, 966
TseFI GTSAC 5 cut(s) 103, 364, 793, 952, 1183
TseI GCWGC 3 cut(s) 662, 995, 1469
Tsp45I GTSAC 5 cut(s) 103, 364, 793, 952, 1183
TspDTI ATGAA 2 cut(s) 651, 938
TspRI CASTG 5 cut(s) 112, 220, 694, 955, 966
Tth111I GACNNNGTC 1 cut(s) 362
VneI GTGCAC 1 cut(s) 1155
VpaK11BI GGWCC 4 cut(s) 281, 358, 868, 1257
XapI RAATTY 2 cut(s) 457, 879
XbaI TCTAGA 2 cut(s) 1063, 1498
XspI CTAG 4 cut(s) 570, 1064, 1097, 1499
ZrmI AGTACT 1 cut(s) 452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.