AT5G37140
ERF Family

BEST Arabidopsis thaliana protein match is P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000279
Physical Location & Seq
Forward (+)
14690436 .. 14692851
2416 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37140.1

Sequence Viewer

Length: 2079 bp
ATGGACCACCAATTCAAGGAAACTTCACTTCAGTTTGGTGTTTTCCTCATGAATTTAACAACCAACACTCGAATTTGGAACGCTTTGCACAACGAGGCCGCCAATTCCACCCTAATCAAGAGTGTGCTTCAGGAAAATACTCTGACAACAGAACAATGCGTTTGTGAAAGTGGTGCTCATGGTTCTGACCGTGTTACGAATATAATCCGTTCCGCTAAATTGAACTCTTCACAAGAAGCTGCAATCTTGAGCTGCCTTAAGATAAGGAACTGTAATCACAAGCACAGTGTGAAGCTGATATGGGGACCTCCTGGTACTGGCAAAACAAAGACGGTCGCTACTCTTCTCTTTTGCCTTCTTAAGCTAAGCTGCAAAACAGTTGTTTGTGCTCCTACAAACACAGCTATCGTAGAAGTAACATCGAGGCTCTTATCCTTATTTAAAACTTCTTCATCAGAACATTCTACTTATGGGCTAGGTAATATTGTTCTCTCTGGAAACCAGGCTCGAATGGGGATTAAAGAGAATGATGTTCTTCTCGATGTGTTTCTTGATGAGCGCATTGGAATACTCACAAGCCTGTTTTCACCTACTTCTGGATGGAAGCAGAGATTAGAGTCACTAATCGACTTTCTTGAGAACACAGAGGCCAAGTACGAGCATTACGTCCACTTATTGAAAGAAGTTGAAAGGATGAGTGAAGAAGCTGAAAAAAAGAAGAAAGGAGCTGATAAGAAGCCGAAAGCAATAAAGATTCTTACATTTGGAGAGTTTGTAAAGAAGACTTTTGATGGCTTCAGTGAAGAGTTGGAGAAAGGTATGGTTGATTTATGGACTCATCTTCCAAAGTCTTTCATTACGTCTGAAAATGTGAAGAGTATGGTCACAGCTCGTAAAGCTCTTCAGCGCGTAAGATATTTCTTGAAAGAGAATTTTTCTAGAGATGATTTTAAAAAGGGAAGTTTGAAATTTGATTGCTTCAACGGAGTCAGTGCTTATTGCCTTCAGATTCTACGTTTACTTCCTGAACGTTTTGAGGTTTCAGACATGCTGGAAAACAATGATACAAAAACATTTTGTCTACAGAATGCGGACATAATATTCTGTACAGCCTCAGGTGCTGCGGATATGAATCCGATAAGGACAGGATCGGTCGACCTTCTTGTGGTTGATGAGGCGGCTCAGCTTAAAGAATGTGAATCAGTGGCTGCTTTGCAACTTTCTGGACTTCGTCATGCTGTTCTAATAGGAGATGAGCTTCAACTGCCTGCAATGGTTCATAACGAGGCGAAATTCGGAAGAAGCTTGTTCGAGAGATTGGTTCTGCTTGGTCACAACAAGCATTTGCTTAATGTTCAATATCGAATGCATCCTTCGATTAGTCGTTTCCCTAATAAAGAGTTCTATGGTGGGAGAATCAAAGATGCTGCTAATGTTCAAGAAAGTATTTATCAAAAGAGGTTTCTTCAAGGAAACATGTTTGGTTCCTTCTCTTTTATCAATGTTGGACGTGGAGAAGAAGAGTTTGGTGATGGACATAGTCCCAAAAACATGGTTGAAGTTGCTGTCATTTCCGAAATTATATCCAATCTTTTCAAAGTTTCAAGTGAAAGAAGAATAAAGATGAGCGTTGGAGTGGTTTCACCATATAAAGGTCAGGTCAGAGCAATCCAAGAGAGAACCACAAATAAGTACAGCTCCTTATCAGGTCTTTTCACTTTGAATGTTCGGTCAGTAGATGGGTTTCAAGGTGGTGAAGAAGACATTATCATCATCTCTACCGTTAGAAGTAATGGTAACGGGAAAGTGGGATTTCTTAACAACCGTCAAAGAGCTAACGTGGCACTGACTCGAGCAAGACACTGTTTATGGGTGATTGGTAACGAGACAACTTTGGCTCTAAGTGGTTCGAGTTGGGCAAAACTGATAAGTGAGTCTAGGACACTTGGATGTTTCTACGATGCTGCTGATGAGAAGAATCTAAGAGATGCCATGAATGAGGCTTTGCTCGAGGATGTATCTACGAGTTTTGGTTCTCTTTCTATTAGGAATGGCTATGGGAAAAGAAATGCTTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

692

Amino Acids

77.29

Weight (kDa)

8.8

Isoelectric Point (pI)

36.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_11 PF13086 73 - 428 2.1e-32 AAA domain
AAA_19 PF13245 93 - 424 7.9e-09 AAA domain
AAA_12 PF13087 433 - 629 1.4e-57 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 1081, 1155
AccII CGCG 1 cut(s) 909
AciI CCGC 5 cut(s) 99, 213, 1091, 1124, 1178
AclI AACGTT 1 cut(s) 1030
AclWI GGATC 1 cut(s) 1156
AcsI RAATTY 5 cut(s) 52, 72, 931, 968, 1292
AcuI CTGAAG 5 cut(s) 14, 113, 781, 887, 989
AdeI CACNNNGTG 1 cut(s) 289
AfaI GTAC 4 cut(s) 316, 656, 1108, 1694
AfiI CCNNNNNNNGG 5 cut(s) 16, 317, 596, 1165, 1652
AflII CTTAAG 2 cut(s) 257, 359
AflIII ACRYGT 1 cut(s) 1476
AjiI CACGTC 1 cut(s) 1511
AjnI CCWGG 2 cut(s) 310, 501
AjuI GAANNNNNNNTTGG 2 cut(s) 1509, 1541
Alw21I GWGCWC 2 cut(s) 178, 391
Alw26I GTCTC 1 cut(s) 1880
AlwI GGATC 1 cut(s) 1156
AlwNI CAGNNNCTG 2 cut(s) 1121, 1208
Ama87I CYCGRG 2 cut(s) 1851, 2009
AoxI GGCC 2 cut(s) 96, 648
ApeKI GCWGC 7 cut(s) 239, 252, 369, 1121, 1208, 1427, 1964
ApoI RAATTY 5 cut(s) 52, 72, 931, 968, 1292
AspLEI GCGC 2 cut(s) 561, 909
AspS9I GGNCC 2 cut(s) 4, 305
AsuHPI GGTGA 5 cut(s) 579, 1541, 1635, 1766, 1885
AvaI CYCGRG 2 cut(s) 1851, 2009
AvaII GGWCC 2 cut(s) 4, 305
AxyI CCTNAGG 1 cut(s) 1114
BbsI GAAGAC 2 cut(s) 788, 1767
Bbv12I GWGCWC 2 cut(s) 178, 391
BbvI GCAGC 7 cut(s) 226, 239, 356, 1108, 1195, 1414, 1951
BccI CCATC 4 cut(s) 594, 785, 1526, 1733
BciT130I CCWGG 2 cut(s) 312, 503
BcoDI GTCTC 1 cut(s) 1880
BfaI CTAG 3 cut(s) 476, 939, 1938
BfmI CTRYAG 1 cut(s) 1082
BfrI CTTAAG 2 cut(s) 257, 359
BisI GCNGC 9 cut(s) 99, 240, 253, 370, 1122, 1179, 1209, 1428, 1965
BlpI GCTNAGC 2 cut(s) 365, 1182
BlsI GCNGC 9 cut(s) 100, 241, 254, 371, 1123, 1180, 1210, 1429, 1966
Bme1390I CCNGG 2 cut(s) 312, 503
Bme18I GGWCC 2 cut(s) 4, 305
BmeT110I CYCGRG 2 cut(s) 1851, 2009
BmgBI CACGTC 1 cut(s) 1511
BmgT120I GGNCC 2 cut(s) 4, 305
BmiI GGNNCC 2 cut(s) 306, 1486
BmrFI CCNGG 2 cut(s) 312, 503
BmsI GCATC 4 cut(s) 1378, 1414, 1951, 1978
BpiI GAAGAC 2 cut(s) 788, 1767
Bpu1102I GCTNAGC 2 cut(s) 365, 1182
BpuEI CTTGAG 2 cut(s) 268, 656
BsaBI GATNNNNATC 1 cut(s) 1131
BsaXI ACNNNNNCTCC 2 cut(s) 759, 789
Bsc4I CCNNNNNNNGG 5 cut(s) 16, 317, 596, 1165, 1652
Bse1I ACTGG 1 cut(s) 322
Bse21I CCTNAGG 1 cut(s) 1114
Bse3DI GCAATG 1 cut(s) 1278
Bse8I GATNNNNATC 1 cut(s) 1131
BseBI CCWGG 2 cut(s) 312, 503
BseGI GGATG 5 cut(s) 605, 699, 1369, 1955, 2020
BseJI GATNNNNATC 1 cut(s) 1131
BseLI CCNNNNNNNGG 5 cut(s) 16, 317, 596, 1165, 1652
BseMI GCAATG 1 cut(s) 1278
BseMII CTCAG 2 cut(s) 1128, 1196
BseNI ACTGG 1 cut(s) 322
BseXI GCAGC 7 cut(s) 226, 239, 356, 1108, 1195, 1414, 1951
Bsh1236I CGCG 1 cut(s) 909
Bsh1285I CGRYCG 2 cut(s) 336, 1155
BshFI GGCC 2 cut(s) 98, 650
BsiEI CGRYCG 2 cut(s) 336, 1155
BsiHKAI GWGCWC 2 cut(s) 178, 391
BsiHKCI CYCGRG 2 cut(s) 1851, 2009
BslFI GGGAC 2 cut(s) 318, 1527
BslI CCNNNNNNNGG 5 cut(s) 16, 317, 596, 1165, 1652
BsmAI GTCTC 1 cut(s) 1880
BsmFI GGGAC 2 cut(s) 318, 1527
BsmI GAATGC 2 cut(s) 1093, 1371
BsnI GGCC 2 cut(s) 98, 650
BsoBI CYCGRG 2 cut(s) 1851, 2009
Bsp1286I GDGCHC 2 cut(s) 178, 391
Bsp1407I TGTACA 1 cut(s) 1106
Bsp143I GATC 1 cut(s) 1148
Bsp1720I GCTNAGC 2 cut(s) 365, 1182
BspACI CCGC 5 cut(s) 99, 213, 1091, 1124, 1178
BspANI GGCC 2 cut(s) 98, 650
BspCNI CTCAG 2 cut(s) 1127, 1195
BspFNI CGCG 1 cut(s) 909
BspHI TCATGA 1 cut(s) 48
BspLI GGNNCC 2 cut(s) 306, 1486
BspPI GGATC 1 cut(s) 1156
BspQI GCTCTTC 1 cut(s) 906
BspTI CTTAAG 2 cut(s) 257, 359
BsrDI GCAATG 1 cut(s) 1278
BsrGI TGTACA 1 cut(s) 1106
BsrI ACTGG 1 cut(s) 322
BssMI GATC 1 cut(s) 1148
Bst2UI CCWGG 2 cut(s) 312, 503
Bst4CI ACNGT 8 cut(s) 191, 272, 287, 334, 379, 1783, 1826, 1865
Bst6I CTCTTC 6 cut(s) 232, 348, 798, 869, 906, 1515
BstAFI CTTAAG 2 cut(s) 257, 359
BstAUI TGTACA 1 cut(s) 1106
BstC8I GCNNGC 1 cut(s) 1269
BstDEI CTNAG 5 cut(s) 365, 1114, 1182, 1901, 1982
BstF5I GGATG 5 cut(s) 605, 699, 1369, 1955, 2020
BstFNI CGCG 1 cut(s) 909
BstHHI GCGC 2 cut(s) 561, 909
BstKTI GATC 1 cut(s) 1151
BstMAI GTCTC 1 cut(s) 1880
BstMBI GATC 1 cut(s) 1148
BstMCI CGRYCG 2 cut(s) 336, 1155
BstMWI GCNNNNNNNGC 4 cut(s) 896, 1118, 1264, 1841
BstNI CCWGG 2 cut(s) 312, 503
BstNSI RCATGY 2 cut(s) 1051, 1480
BstSCI CCNGG 2 cut(s) 310, 501
BstSFI CTRYAG 1 cut(s) 1082
BstUI CGCG 1 cut(s) 909
BstV1I GCAGC 7 cut(s) 226, 239, 356, 1108, 1195, 1414, 1951
BstV2I GAAGAC 2 cut(s) 788, 1767
BstXI CCANNNNNNTGG 1 cut(s) 1552
Bsu36I CCTNAGG 1 cut(s) 1114
BsuRI GGCC 2 cut(s) 98, 650
BtrI CACGTC 1 cut(s) 1511
BtsCI GGATG 5 cut(s) 605, 699, 1369, 1955, 2020
BtsIMutI CAGTG 6 cut(s) 292, 805, 997, 1209, 1844, 1861
Cac8I GCNNGC 1 cut(s) 1269
CaiI CAGNNNCTG 2 cut(s) 1121, 1208
CciI TCATGA 1 cut(s) 48
CfoI GCGC 2 cut(s) 561, 909
Cfr13I GGNCC 2 cut(s) 4, 305
Csp6I GTAC 4 cut(s) 315, 655, 1107, 1693
CviAII CATG 7 cut(s) 49, 179, 1048, 1235, 1477, 1552, 1993
CviQI GTAC 4 cut(s) 315, 655, 1107, 1693
DdeI CTNAG 5 cut(s) 365, 1114, 1182, 1901, 1982
DpnI GATC 1 cut(s) 1150
DpnII GATC 1 cut(s) 1148
DraI TTTAAA 2 cut(s) 442, 952
DraIII CACNNNGTG 1 cut(s) 289
Eam1104I CTCTTC 6 cut(s) 232, 348, 798, 869, 906, 1515
EarI CTCTTC 6 cut(s) 232, 348, 798, 869, 906, 1515
Eco47I GGWCC 2 cut(s) 4, 305
Eco57I CTGAAG 5 cut(s) 14, 113, 781, 887, 989
Eco81I CCTNAGG 1 cut(s) 1114
Eco88I CYCGRG 2 cut(s) 1851, 2009
EcoO109I RGGNCCY 1 cut(s) 305
EcoRII CCWGG 2 cut(s) 310, 501
EcoT22I ATGCAT 1 cut(s) 1371
FaeI CATG 7 cut(s) 52, 182, 1051, 1238, 1480, 1555, 1996
FalI AAGNNNNNCTT 1 cut(s) 2056
FaqI GGGAC 2 cut(s) 318, 1527
FatI CATG 7 cut(s) 48, 178, 1047, 1234, 1476, 1551, 1992
FblI GTMKAC 2 cut(s) 1081, 1155
Fnu4HI GCNGC 9 cut(s) 99, 240, 253, 370, 1122, 1179, 1209, 1428, 1965
FokI GGATG 5 cut(s) 612, 706, 1356, 1962, 2027
Fsp4HI GCNGC 9 cut(s) 99, 240, 253, 370, 1122, 1179, 1209, 1428, 1965
FspBI CTAG 3 cut(s) 476, 939, 1938
GlaI GCGC 2 cut(s) 560, 908
GluI GCNGC 9 cut(s) 99, 240, 253, 370, 1122, 1179, 1209, 1428, 1965
HaeIII GGCC 2 cut(s) 98, 650
HhaI GCGC 2 cut(s) 561, 909
Hin1II CATG 7 cut(s) 52, 182, 1051, 1238, 1480, 1555, 1996
Hin6I GCGC 2 cut(s) 559, 907
HinP1I GCGC 2 cut(s) 559, 907
HincII GTYRAC 1 cut(s) 1156
HindII GTYRAC 1 cut(s) 1156
HindIII AAGCTT 1 cut(s) 1303
HphI GGTGA 5 cut(s) 579, 1541, 1635, 1766, 1885
Hpy166II GTNNAC 4 cut(s) 670, 1019, 1082, 1156
Hpy8I GTNNAC 4 cut(s) 670, 1019, 1082, 1156
HpyAV CCTTC 5 cut(s) 365, 1013, 1169, 1383, 1498
HpyCH4III ACNGT 8 cut(s) 191, 272, 287, 334, 379, 1783, 1826, 1865
HpyCH4IV ACGT 6 cut(s) 666, 860, 1015, 1030, 1510, 1839
HpyCH4V TGCA 6 cut(s) 88, 242, 372, 1216, 1271, 1369
HpyF10VI GCNNNNNNNGC 4 cut(s) 896, 1118, 1264, 1841
HpyF3I CTNAG 5 cut(s) 365, 1114, 1182, 1901, 1982
HpySE526I ACGT 6 cut(s) 666, 860, 1015, 1030, 1510, 1839
Hsp92II CATG 7 cut(s) 52, 182, 1051, 1238, 1480, 1555, 1996
HspAI GCGC 2 cut(s) 559, 907
Kzo9I GATC 1 cut(s) 1148
LguI GCTCTTC 1 cut(s) 906
LmnI GCTCC 3 cut(s) 394, 725, 1703
Lsp1109I GCAGC 7 cut(s) 226, 239, 356, 1108, 1195, 1414, 1951
LweI GCATC 4 cut(s) 1378, 1414, 1951, 1978
MaeI CTAG 3 cut(s) 476, 939, 1938
MaeII ACGT 6 cut(s) 666, 860, 1015, 1030, 1510, 1839
MaeIII GTNAC 7 cut(s) 193, 415, 618, 883, 1331, 1796, 1880
MalI GATC 1 cut(s) 1150
MboI GATC 1 cut(s) 1148
MhlI GDGCHC 2 cut(s) 178, 391
MluCI AATT 9 cut(s) 11, 52, 72, 103, 218, 931, 968, 1292, 1578
MlyI GAGTC 5 cut(s) 626, 829, 996, 1843, 1943
MmeI TCCRAC 3 cut(s) 789, 1486, 1612
Mph1103I ATGCAT 1 cut(s) 1371
MseI TTAA 9 cut(s) 56, 258, 360, 441, 519, 951, 1188, 1350, 1818
MslI CAYNNNNRTG 1 cut(s) 1948
MspCI CTTAAG 2 cut(s) 257, 359
MspR9I CCNGG 2 cut(s) 312, 503
Mva1269I GAATGC 2 cut(s) 1093, 1371
MvaI CCWGG 2 cut(s) 312, 503
MvnI CGCG 1 cut(s) 909
MwoI GCNNNNNNNGC 4 cut(s) 896, 1118, 1264, 1841
NdeII GATC 1 cut(s) 1148
NlaIII CATG 7 cut(s) 52, 182, 1051, 1238, 1480, 1555, 1996
NlaIV GGNNCC 2 cut(s) 306, 1486
NmuCI GTSAC 3 cut(s) 618, 883, 1331
NsiI ATGCAT 1 cut(s) 1371
NspI RCATGY 2 cut(s) 1051, 1480
PaeR7I CTCGAG 2 cut(s) 1851, 2009
PagI TCATGA 1 cut(s) 48
PciI ACATGT 1 cut(s) 1476
PciSI GCTCTTC 1 cut(s) 906
PcsI WCGNNNNNNNCGW 1 cut(s) 663
PctI GAATGC 2 cut(s) 1093, 1371
PfeI GAWTC 6 cut(s) 754, 1009, 1132, 1199, 1416, 1978
PflFI GACNNNGTC 2 cut(s) 1230, 1539
PkrI GCNGC 9 cut(s) 100, 241, 254, 371, 1123, 1180, 1210, 1429, 1966
PleI GAGTC 5 cut(s) 625, 829, 995, 1843, 1942
PpsI GAGTC 5 cut(s) 625, 829, 995, 1843, 1942
PpuMI RGGWCCY 1 cut(s) 305
PscI ACATGT 1 cut(s) 1476
Psp1406I AACGTT 1 cut(s) 1030
Psp5II RGGWCCY 1 cut(s) 305
Psp6I CCWGG 2 cut(s) 310, 501
PspGI CCWGG 2 cut(s) 310, 501
PspN4I GGNNCC 2 cut(s) 306, 1486
PspPI GGNCC 2 cut(s) 4, 305
PspPPI RGGWCCY 1 cut(s) 305
PspXI VCTCGAGB 2 cut(s) 1851, 2009
PstNI CAGNNNCTG 2 cut(s) 1121, 1208
PsyI GACNNNGTC 2 cut(s) 1230, 1539
RsaI GTAC 4 cut(s) 316, 656, 1108, 1694
RsaNI GTAC 4 cut(s) 315, 655, 1107, 1693
RseI CAYNNNNRTG 1 cut(s) 1948
SalI GTCGAC 1 cut(s) 1154
SapI GCTCTTC 1 cut(s) 906
SaqAI TTAA 9 cut(s) 56, 258, 360, 441, 519, 951, 1188, 1350, 1818
SatI GCNGC 9 cut(s) 99, 240, 253, 370, 1122, 1179, 1209, 1428, 1965
Sau3AI GATC 1 cut(s) 1148
Sau96I GGNCC 2 cut(s) 4, 305
SchI GAGTC 5 cut(s) 626, 829, 996, 1843, 1943
ScrFI CCNGG 2 cut(s) 312, 503
SduI GDGCHC 2 cut(s) 178, 391
SfaNI GCATC 4 cut(s) 1378, 1414, 1951, 1978
SfcI CTRYAG 1 cut(s) 1082
Sfr274I CTCGAG 2 cut(s) 1851, 2009
SinI GGWCC 2 cut(s) 4, 305
SlaI CTCGAG 2 cut(s) 1851, 2009
SmiMI CAYNNNNRTG 1 cut(s) 1948
SmlI CTYRAG 6 cut(s) 247, 257, 359, 635, 1851, 2009
SmoI CTYRAG 6 cut(s) 247, 257, 359, 635, 1851, 2009
Sse9I AATT 9 cut(s) 11, 52, 72, 103, 218, 931, 968, 1292, 1578
SsiI CCGC 5 cut(s) 99, 213, 1091, 1124, 1178
SspI AATATT 2 cut(s) 484, 1101
SspMI CTAG 3 cut(s) 476, 939, 1938
StyD4I CCNGG 2 cut(s) 310, 501
TaaI ACNGT 8 cut(s) 191, 272, 287, 334, 379, 1783, 1826, 1865
TaiI ACGT 6 cut(s) 669, 863, 1018, 1033, 1513, 1842
TaqII GACCGA 2 cut(s) 1141, 1719
TasI AATT 9 cut(s) 11, 52, 72, 103, 218, 931, 968, 1292, 1578
TatI WGTACW 2 cut(s) 1106, 1692
TauI GCSGC 2 cut(s) 101, 1181
TfiI GAWTC 6 cut(s) 754, 1009, 1132, 1199, 1416, 1978
Tru1I TTAA 9 cut(s) 56, 258, 360, 441, 519, 951, 1188, 1350, 1818
Tru9I TTAA 9 cut(s) 56, 258, 360, 441, 519, 951, 1188, 1350, 1818
TscAI CASTG 6 cut(s) 292, 805, 997, 1209, 1851, 1868
TseFI GTSAC 3 cut(s) 618, 883, 1331
TseI GCWGC 7 cut(s) 239, 252, 369, 1121, 1208, 1427, 1964
Tsp45I GTSAC 3 cut(s) 618, 883, 1331
TspDTI ATGAA 6 cut(s) 65, 441, 844, 1145, 1268, 2009
TspGWI ACGGA 2 cut(s) 197, 999
TspRI CASTG 6 cut(s) 292, 805, 997, 1209, 1851, 1868
Tth111I GACNNNGTC 2 cut(s) 1230, 1539
Vha464I CTTAAG 2 cut(s) 257, 359
VpaK11BI GGWCC 2 cut(s) 4, 305
XapI RAATTY 5 cut(s) 52, 72, 931, 968, 1292
XbaI TCTAGA 1 cut(s) 938
XceI RCATGY 2 cut(s) 1051, 1480
XhoI CTCGAG 2 cut(s) 1851, 2009
XmiI GTMKAC 2 cut(s) 1081, 1155
XspI CTAG 3 cut(s) 476, 939, 1938
Zsp2I ATGCAT 1 cut(s) 1371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.