AAA domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 720, 1242 |
| AccB1I | GGYRCC | 2 cut(s) | 232, 2958 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 359, 866, 1000, 1142 |
| AccII | CGCG | 1 cut(s) | 229 |
| AciI | CCGC | 3 cut(s) | 229, 2031, 2509 |
| AclI | AACGTT | 2 cut(s) | 1301, 3216 |
| AcoI | YGGCCR | 1 cut(s) | 3236 |
| AcuI | CTGAAG | 1 cut(s) | 1619 |
| AcvI | CACGTG | 1 cut(s) | 2633 |
| AcyI | GRCGYC | 1 cut(s) | 2959 |
| AdeI | CACNNNGTG | 2 cut(s) | 759, 1790 |
| AfaI | GTAC | 7 cut(s) | 594, 937, 1331, 1870, 1895, 2470, 2625 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 228, 229, 359, 835, 866, 985, 1000, 1142 |
| AflIII | ACRYGT | 4 cut(s) | 595, 932, 1124, 2630 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2997 |
| AhlI | ACTAGT | 1 cut(s) | 2092 |
| AjnI | CCWGG | 3 cut(s) | 111, 859, 1984 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1826, 1858 |
| Alw21I | GWGCWC | 3 cut(s) | 764, 1271, 1391 |
| Alw26I | GTCTC | 6 cut(s) | 125, 313, 382, 1318, 2769, 3311 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 866 |
| Ama87I | CYCGRG | 1 cut(s) | 1691 |
| AoxI | GGCC | 3 cut(s) | 749, 1987, 3236 |
| ApeKI | GCWGC | 4 cut(s) | 726, 788, 1940, 3189 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 2079, 2111, 2418, 2450, 3140, 3172 |
| AseI | ATTAAT | 1 cut(s) | 1683 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2234, 2944 |
| AspLEI | GCGC | 1 cut(s) | 2961 |
| AspS9I | GGNCC | 5 cut(s) | 750, 854, 1753, 2201, 3048 |
| AsuHPI | GGTGA | 8 cut(s) | 374, 818, 1271, 1508, 1601, 1672, 2409, 2546 |
| AsuII | TTCGAA | 2 cut(s) | 2085, 2318 |
| AvaI | CYCGRG | 1 cut(s) | 1691 |
| AvaII | GGWCC | 4 cut(s) | 854, 1753, 2201, 3048 |
| BaeGI | GKGCMC | 1 cut(s) | 235 |
| BalI | TGGCCA | 1 cut(s) | 3238 |
| BamHI | GGATCC | 2 cut(s) | 1186, 3030 |
| BanI | GGYRCC | 2 cut(s) | 232, 2958 |
| BanII | GRGCYC | 2 cut(s) | 1271, 1391 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2162, 2194 |
| BbrPI | CACGTG | 1 cut(s) | 2633 |
| BbsI | GAAGAC | 1 cut(s) | 55 |
| Bbv12I | GWGCWC | 3 cut(s) | 764, 1271, 1391 |
| BbvI | GCAGC | 4 cut(s) | 713, 775, 1927, 3176 |
| BceAI | ACGGC | 2 cut(s) | 739, 989 |
| BciT130I | CCWGG | 3 cut(s) | 113, 861, 1986 |
| BclI | TGATCA | 2 cut(s) | 1099, 1402 |
| BcoDI | GTCTC | 6 cut(s) | 125, 313, 382, 1318, 2769, 3311 |
| BcuI | ACTAGT | 1 cut(s) | 2092 |
| BfaI | CTAG | 4 cut(s) | 744, 1160, 1734, 2093 |
| BfmI | CTRYAG | 1 cut(s) | 789 |
| BfoI | RGCGCY | 1 cut(s) | 2962 |
| BisI | GCNGC | 4 cut(s) | 727, 789, 1941, 3190 |
| BlpI | GCTNAGC | 2 cut(s) | 1270, 1944 |
| BlsI | GCNGC | 4 cut(s) | 728, 790, 1942, 3191 |
| BmcAI | AGTACT | 1 cut(s) | 1331 |
| Bme1390I | CCNGG | 3 cut(s) | 113, 861, 1986 |
| Bme18I | GGWCC | 4 cut(s) | 854, 1753, 2201, 3048 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2997 |
| BmeT110I | CYCGRG | 1 cut(s) | 1691 |
| BmgT120I | GGNCC | 5 cut(s) | 750, 854, 1753, 2201, 3048 |
| BmiI | GGNNCC | 7 cut(s) | 234, 855, 977, 1188, 1745, 2960, 3032 |
| BmrFI | CCNGG | 3 cut(s) | 113, 861, 1986 |
| BmsI | GCATC | 7 cut(s) | 500, 1472, 1883, 2152, 2704, 2786, 3353 |
| BpiI | GAAGAC | 1 cut(s) | 55 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 72, 104, 122, 154 |
| BpmI | CTGGAG | 2 cut(s) | 843, 3299 |
| Bpu10I | CCTNAGC | 1 cut(s) | 732 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1270, 1944 |
| Bpu14I | TTCGAA | 2 cut(s) | 2085, 2318 |
| BpuEI | CTTGAG | 7 cut(s) | 193, 203, 1106, 1202, 1445, 2261, 3227 |
| BsaAI | YACGTR | 2 cut(s) | 596, 2633 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2552 |
| BsaHI | GRCGYC | 1 cut(s) | 2959 |
| BsaI | GGTCTC | 1 cut(s) | 382 |
| BsaJI | CCNNGG | 4 cut(s) | 267, 860, 2527, 3051 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 922, 952, 1313, 1343, 1433, 1463 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 228, 229, 359, 835, 866, 985, 1000, 1142 |
| Bse1I | ACTGG | 6 cut(s) | 871, 994, 1920, 2131, 2494, 3239 |
| Bse3DI | GCAATG | 2 cut(s) | 369, 1728 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2552 |
| BseBI | CCWGG | 3 cut(s) | 113, 861, 1986 |
| BseDI | CCNNGG | 4 cut(s) | 267, 860, 2527, 3051 |
| BseGI | GGATG | 2 cut(s) | 2143, 2548 |
| BseJI | GATNNNNATC | 1 cut(s) | 2552 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 228, 229, 359, 835, 866, 985, 1000, 1142 |
| BseMI | GCAATG | 2 cut(s) | 369, 1728 |
| BseNI | ACTGG | 6 cut(s) | 871, 994, 1920, 2131, 2494, 3239 |
| BseRI | GAGGAG | 6 cut(s) | 331, 525, 528, 1066, 1442, 1571 |
| BseSI | GKGCMC | 1 cut(s) | 235 |
| BseXI | GCAGC | 4 cut(s) | 713, 775, 1927, 3176 |
| BsgI | GTGCAG | 1 cut(s) | 940 |
| Bsh1236I | CGCG | 1 cut(s) | 229 |
| Bsh1285I | CGRYCG | 1 cut(s) | 144 |
| BshFI | GGCC | 3 cut(s) | 751, 1989, 3238 |
| BshNI | GGYRCC | 2 cut(s) | 232, 2958 |
| BsiEI | CGRYCG | 1 cut(s) | 144 |
| BsiHKAI | GWGCWC | 3 cut(s) | 764, 1271, 1391 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1691 |
| BsiWI | CGTACG | 1 cut(s) | 592 |
| BslFI | GGGAC | 4 cut(s) | 205, 877, 2118, 3332 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 228, 229, 359, 835, 866, 985, 1000, 1142 |
| BsmAI | GTCTC | 6 cut(s) | 125, 313, 382, 1318, 2769, 3311 |
| BsmBI | CGTCTC | 1 cut(s) | 125 |
| BsmFI | GGGAC | 4 cut(s) | 205, 877, 2118, 3332 |
| BsmI | GAATGC | 3 cut(s) | 2065, 2145, 3370 |
| BsnI | GGCC | 3 cut(s) | 751, 1989, 3238 |
| Bso31I | GGTCTC | 1 cut(s) | 382 |
| BsoBI | CYCGRG | 1 cut(s) | 1691 |
| Bsp119I | TTCGAA | 2 cut(s) | 2085, 2318 |
| Bsp1286I | GDGCHC | 4 cut(s) | 235, 764, 1271, 1391 |
| Bsp1407I | TGTACA | 1 cut(s) | 1893 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1270, 1944 |
| BspACI | CCGC | 3 cut(s) | 229, 2031, 2509 |
| BspANI | GGCC | 3 cut(s) | 751, 1989, 3238 |
| BspFNI | CGCG | 1 cut(s) | 229 |
| BspHI | TCATGA | 2 cut(s) | 573, 2968 |
| BspLI | GGNNCC | 7 cut(s) | 234, 855, 977, 1188, 1745, 2960, 3032 |
| BspMAI | CTGCAG | 1 cut(s) | 793 |
| BspT104I | TTCGAA | 2 cut(s) | 2085, 2318 |
| BspT107I | GGYRCC | 2 cut(s) | 232, 2958 |
| BspTNI | GGTCTC | 1 cut(s) | 382 |
| BsrDI | GCAATG | 2 cut(s) | 369, 1728 |
| BsrGI | TGTACA | 1 cut(s) | 1893 |
| BsrI | ACTGG | 6 cut(s) | 871, 994, 1920, 2131, 2494, 3239 |
| BssECI | CCNNGG | 4 cut(s) | 267, 860, 2527, 3051 |
| BssNI | GRCGYC | 1 cut(s) | 2959 |
| BssT1I | CCWWGG | 2 cut(s) | 267, 2527 |
| Bst2UI | CCWGG | 3 cut(s) | 113, 861, 1986 |
| Bst6I | CTCTTC | 1 cut(s) | 2532 |
| BstACI | GRCGYC | 1 cut(s) | 2959 |
| BstAUI | TGTACA | 1 cut(s) | 1893 |
| BstBAI | YACGTR | 2 cut(s) | 596, 2633 |
| BstBI | TTCGAA | 2 cut(s) | 2085, 2318 |
| BstC8I | GCNNGC | 3 cut(s) | 231, 1855, 3327 |
| BstDSI | CCRYGG | 1 cut(s) | 3051 |
| BstF5I | GGATG | 2 cut(s) | 2143, 2548 |
| BstFNI | CGCG | 1 cut(s) | 229 |
| BstH2I | RGCGCY | 1 cut(s) | 2962 |
| BstHHI | GCGC | 1 cut(s) | 2961 |
| BstMAI | GTCTC | 6 cut(s) | 125, 313, 382, 1318, 2769, 3311 |
| BstMCI | CGRYCG | 1 cut(s) | 144 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 2060 |
| BstNI | CCWGG | 3 cut(s) | 113, 861, 1986 |
| BstNSI | RCATGY | 3 cut(s) | 936, 1128, 2000 |
| BstSCI | CCNGG | 3 cut(s) | 111, 859, 1984 |
| BstSFI | CTRYAG | 1 cut(s) | 789 |
| BstSLI | GKGCMC | 1 cut(s) | 235 |
| BstUI | CGCG | 1 cut(s) | 229 |
| BstV1I | GCAGC | 4 cut(s) | 713, 775, 1927, 3176 |
| BstV2I | GAAGAC | 1 cut(s) | 55 |
| BstX2I | RGATCY | 5 cut(s) | 416, 1186, 2258, 2791, 3030 |
| BstYI | RGATCY | 5 cut(s) | 416, 1186, 2258, 2791, 3030 |
| BsuRI | GGCC | 3 cut(s) | 751, 1989, 3238 |
| BtgI | CCRYGG | 1 cut(s) | 3051 |
| BtgZI | GCGATG | 1 cut(s) | 2872 |
| BtsCI | GGATG | 2 cut(s) | 2143, 2548 |
| BtsI | GCAGTG | 1 cut(s) | 3268 |
| BtsIMutI | CAGTG | 8 cut(s) | 926, 1334, 1381, 1913, 2641, 3177, 3246, 3268 |
| Cac8I | GCNNGC | 3 cut(s) | 231, 1855, 3327 |
| CaiI | CAGNNNCTG | 1 cut(s) | 866 |
| CciI | TCATGA | 2 cut(s) | 573, 2968 |
| CfoI | GCGC | 1 cut(s) | 2961 |
| Cfr13I | GGNCC | 5 cut(s) | 750, 854, 1753, 2201, 3048 |
| CseI | GACGC | 1 cut(s) | 3131 |
| CsiI | ACCWGGT | 1 cut(s) | 111 |
| Csp6I | GTAC | 7 cut(s) | 593, 936, 1330, 1869, 1894, 2469, 2624 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 931, 966 |
| CviQI | GTAC | 7 cut(s) | 593, 936, 1330, 1869, 1894, 2469, 2624 |
| DinI | GGCGCC | 1 cut(s) | 2960 |
| DraIII | CACNNNGTG | 2 cut(s) | 759, 1790 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2997 |
| EaeI | YGGCCR | 1 cut(s) | 3236 |
| Eam1104I | CTCTTC | 1 cut(s) | 2532 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2997 |
| EarI | CTCTTC | 1 cut(s) | 2532 |
| Ecl136II | GAGCTC | 2 cut(s) | 1269, 1389 |
| Eco130I | CCWWGG | 2 cut(s) | 267, 2527 |
| Eco24I | GRGCYC | 2 cut(s) | 1271, 1391 |
| Eco31I | GGTCTC | 1 cut(s) | 382 |
| Eco32I | GATATC | 1 cut(s) | 3106 |
| Eco47I | GGWCC | 4 cut(s) | 854, 1753, 2201, 3048 |
| Eco53kI | GAGCTC | 2 cut(s) | 1269, 1389 |
| Eco57I | CTGAAG | 1 cut(s) | 1619 |
| Eco72I | CACGTG | 1 cut(s) | 2633 |
| Eco88I | CYCGRG | 1 cut(s) | 1691 |
| EcoICRI | GAGCTC | 2 cut(s) | 1269, 1389 |
| EcoO109I | RGGNCCY | 1 cut(s) | 854 |
| EcoRI | GAATTC | 3 cut(s) | 691, 2375, 3070 |
| EcoRII | CCWGG | 3 cut(s) | 111, 859, 1984 |
| EcoRV | GATATC | 1 cut(s) | 3106 |
| EcoT14I | CCWWGG | 2 cut(s) | 267, 2527 |
| EcoT22I | ATGCAT | 2 cut(s) | 2145, 3370 |
| EcoT38I | GRGCYC | 2 cut(s) | 1271, 1391 |
| EgeI | GGCGCC | 1 cut(s) | 2960 |
| EheI | GGCGCC | 1 cut(s) | 2960 |
| ErhI | CCWWGG | 2 cut(s) | 267, 2527 |
| Esp3I | CGTCTC | 1 cut(s) | 125 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2846, 2878 |
| FaqI | GGGAC | 4 cut(s) | 205, 877, 2118, 3332 |
| FauI | CCCGC | 2 cut(s) | 222, 2038 |
| FauNDI | CATATG | 2 cut(s) | 346, 3370 |
| FbaI | TGATCA | 2 cut(s) | 1099, 1402 |
| Fnu4HI | GCNGC | 4 cut(s) | 727, 789, 1941, 3190 |
| FokI | GGATG | 2 cut(s) | 2130, 2555 |
| FriOI | GRGCYC | 2 cut(s) | 1271, 1391 |
| Fsp4HI | GCNGC | 4 cut(s) | 727, 789, 1941, 3190 |
| FspBI | CTAG | 4 cut(s) | 744, 1160, 1734, 2093 |
| GlaI | GCGC | 1 cut(s) | 2960 |
| GluI | GCNGC | 4 cut(s) | 727, 789, 1941, 3190 |
| GsuI | CTGGAG | 2 cut(s) | 843, 3299 |
| HaeII | RGCGCY | 1 cut(s) | 2962 |
| HaeIII | GGCC | 3 cut(s) | 751, 1989, 3238 |
| HgaI | GACGC | 1 cut(s) | 3131 |
| HhaI | GCGC | 1 cut(s) | 2961 |
| Hin1I | GRCGYC | 1 cut(s) | 2959 |
| Hin6I | GCGC | 1 cut(s) | 2959 |
| HinP1I | GCGC | 1 cut(s) | 2959 |
| HincII | GTYRAC | 1 cut(s) | 991 |
| HindII | GTYRAC | 1 cut(s) | 991 |
| HindIII | AAGCTT | 3 cut(s) | 476, 2077, 2942 |
| HpaI | GTTAAC | 1 cut(s) | 991 |
| HphI | GGTGA | 8 cut(s) | 374, 818, 1271, 1508, 1601, 1672, 2409, 2546 |
| Hpy166II | GTNNAC | 8 cut(s) | 568, 991, 1122, 1896, 2309, 2860, 3055, 3175 |
| Hpy8I | GTNNAC | 8 cut(s) | 568, 991, 1122, 1896, 2309, 2860, 3055, 3175 |
| HpyCH4IV | ACGT | 7 cut(s) | 134, 591, 595, 1301, 1550, 2632, 3216 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 2060 |
| HpySE526I | ACGT | 7 cut(s) | 134, 591, 595, 1301, 1550, 2632, 3216 |
| Hsp92I | GRCGYC | 1 cut(s) | 2959 |
| HspAI | GCGC | 1 cut(s) | 2959 |
| KasI | GGCGCC | 1 cut(s) | 2958 |
| Ksp22I | TGATCA | 2 cut(s) | 1099, 1402 |
| KspAI | GTTAAC | 1 cut(s) | 991 |
| LmnI | GCTCC | 5 cut(s) | 45, 341, 981, 1266, 1386 |
| Lsp1109I | GCAGC | 4 cut(s) | 713, 775, 1927, 3176 |
| LweI | GCATC | 7 cut(s) | 500, 1472, 1883, 2152, 2704, 2786, 3353 |
| MabI | ACCWGGT | 1 cut(s) | 111 |
| MaeI | CTAG | 4 cut(s) | 744, 1160, 1734, 2093 |
| MaeII | ACGT | 7 cut(s) | 134, 591, 595, 1301, 1550, 2632, 3216 |
| MaeIII | GTNAC | 7 cut(s) | 115, 145, 152, 891, 964, 2684, 3164 |
| MfeI | CAATTG | 5 cut(s) | 882, 1748, 2442, 2586, 2728 |
| MflI | RGATCY | 5 cut(s) | 416, 1186, 2258, 2791, 3030 |
| MhlI | GDGCHC | 4 cut(s) | 235, 764, 1271, 1391 |
| MlsI | TGGCCA | 1 cut(s) | 3238 |
| MluNI | TGGCCA | 1 cut(s) | 3238 |
| Mly113I | GGCGCC | 1 cut(s) | 2959 |
| MlyI | GAGTC | 4 cut(s) | 527, 1172, 1703, 2463 |
| MmeI | TCCRAC | 3 cut(s) | 16, 1127, 1829 |
| Mox20I | TGGCCA | 1 cut(s) | 3238 |
| Mph1103I | ATGCAT | 2 cut(s) | 2145, 3370 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2234, 2944 |
| MscI | TGGCCA | 1 cut(s) | 3238 |
| MslI | CAYNNNNRTG | 3 cut(s) | 578, 931, 3120 |
| Msp20I | TGGCCA | 1 cut(s) | 3238 |
| MspA1I | CMGCKG | 2 cut(s) | 3004, 3329 |
| MspR9I | CCNGG | 3 cut(s) | 113, 861, 1986 |
| MunI | CAATTG | 5 cut(s) | 882, 1748, 2442, 2586, 2728 |
| Mva1269I | GAATGC | 3 cut(s) | 2065, 2145, 3370 |
| MvaI | CCWGG | 3 cut(s) | 113, 861, 1986 |
| MvnI | CGCG | 1 cut(s) | 229 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 2060 |
| NarI | GGCGCC | 1 cut(s) | 2959 |
| NdeI | CATATG | 2 cut(s) | 346, 3370 |
| NlaIV | GGNNCC | 7 cut(s) | 234, 855, 977, 1188, 1745, 2960, 3032 |
| NmuCI | GTSAC | 2 cut(s) | 891, 964 |
| NsiI | ATGCAT | 2 cut(s) | 2145, 3370 |
| NspI | RCATGY | 3 cut(s) | 936, 1128, 2000 |
| NspV | TTCGAA | 2 cut(s) | 2085, 2318 |
| PaeR7I | CTCGAG | 1 cut(s) | 1691 |
| PagI | TCATGA | 2 cut(s) | 573, 2968 |
| PciI | ACATGT | 2 cut(s) | 932, 1124 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 146 |
| PctI | GAATGC | 3 cut(s) | 2065, 2145, 3370 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2234, 2944 |
| Pfl23II | CGTACG | 1 cut(s) | 592 |
| PflFI | GACNNNGTC | 1 cut(s) | 2674 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 359, 866, 1000, 1142 |
| PkrI | GCNGC | 4 cut(s) | 728, 790, 1942, 3191 |
| PleI | GAGTC | 4 cut(s) | 526, 1171, 1702, 2462 |
| PluTI | GGCGCC | 1 cut(s) | 2962 |
| PmaCI | CACGTG | 1 cut(s) | 2633 |
| PmlI | CACGTG | 1 cut(s) | 2633 |
| PpsI | GAGTC | 4 cut(s) | 526, 1171, 1702, 2462 |
| Ppu21I | YACGTR | 2 cut(s) | 596, 2633 |
| PpuMI | RGGWCCY | 1 cut(s) | 854 |
| PscI | ACATGT | 2 cut(s) | 932, 1124 |
| PshBI | ATTAAT | 1 cut(s) | 1683 |
| PsiI | TTATAA | 2 cut(s) | 720, 1242 |
| Psp124BI | GAGCTC | 2 cut(s) | 1271, 1391 |
| Psp1406I | AACGTT | 2 cut(s) | 1301, 3216 |
| Psp5II | RGGWCCY | 1 cut(s) | 854 |
| Psp6I | CCWGG | 3 cut(s) | 111, 859, 1984 |
| PspCI | CACGTG | 1 cut(s) | 2633 |
| PspGI | CCWGG | 3 cut(s) | 111, 859, 1984 |
| PspLI | CGTACG | 1 cut(s) | 592 |
| PspN4I | GGNNCC | 7 cut(s) | 234, 855, 977, 1188, 1745, 2960, 3032 |
| PspPI | GGNCC | 5 cut(s) | 750, 854, 1753, 2201, 3048 |
| PspPPI | RGGWCCY | 1 cut(s) | 854 |
| PspXI | VCTCGAGB | 1 cut(s) | 1691 |
| PstI | CTGCAG | 1 cut(s) | 793 |
| PstNI | CAGNNNCTG | 1 cut(s) | 866 |
| PsuI | RGATCY | 5 cut(s) | 416, 1186, 2258, 2791, 3030 |
| PsyI | GACNNNGTC | 1 cut(s) | 2674 |
| PvuII | CAGCTG | 2 cut(s) | 3004, 3329 |
| RsaI | GTAC | 7 cut(s) | 594, 937, 1331, 1870, 1895, 2470, 2625 |
| RsaNI | GTAC | 7 cut(s) | 593, 936, 1330, 1869, 1894, 2469, 2624 |
| RseI | CAYNNNNRTG | 3 cut(s) | 578, 931, 3120 |
| SacI | GAGCTC | 2 cut(s) | 1271, 1391 |
| SatI | GCNGC | 4 cut(s) | 727, 789, 1941, 3190 |
| Sau96I | GGNCC | 5 cut(s) | 750, 854, 1753, 2201, 3048 |
| ScaI | AGTACT | 1 cut(s) | 1331 |
| SchI | GAGTC | 4 cut(s) | 527, 1172, 1703, 2463 |
| ScrFI | CCNGG | 3 cut(s) | 113, 861, 1986 |
| SduI | GDGCHC | 4 cut(s) | 235, 764, 1271, 1391 |
| SexAI | ACCWGGT | 1 cut(s) | 111 |
| SfaNI | GCATC | 7 cut(s) | 500, 1472, 1883, 2152, 2704, 2786, 3353 |
| SfcI | CTRYAG | 1 cut(s) | 789 |
| SfoI | GGCGCC | 1 cut(s) | 2960 |
| Sfr274I | CTCGAG | 1 cut(s) | 1691 |
| SfuI | TTCGAA | 2 cut(s) | 2085, 2318 |
| SinI | GGWCC | 4 cut(s) | 854, 1753, 2201, 3048 |
| SlaI | CTCGAG | 1 cut(s) | 1691 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 578, 931, 3120 |
| SmlI | CTYRAG | 8 cut(s) | 182, 208, 1085, 1181, 1424, 1691, 2240, 3206 |
| SmoI | CTYRAG | 8 cut(s) | 182, 208, 1085, 1181, 1424, 1691, 2240, 3206 |
| SpeI | ACTAGT | 1 cut(s) | 2092 |
| SsiI | CCGC | 3 cut(s) | 229, 2031, 2509 |
| SspDI | GGCGCC | 1 cut(s) | 2958 |
| SspI | AATATT | 3 cut(s) | 949, 1863, 3248 |
| SspMI | CTAG | 4 cut(s) | 744, 1160, 1734, 2093 |
| SstI | GAGCTC | 2 cut(s) | 1271, 1391 |
| StyD4I | CCNGG | 3 cut(s) | 111, 859, 1984 |
| StyI | CCWWGG | 2 cut(s) | 267, 2527 |
| TaiI | ACGT | 7 cut(s) | 137, 594, 598, 1304, 1553, 2635, 3219 |
| TaqI | TCGA | 7 cut(s) | 140, 1692, 1993, 2085, 2137, 2318, 2383 |
| TatI | WGTACW | 5 cut(s) | 935, 1329, 1868, 1893, 2623 |
| TscAI | CASTG | 8 cut(s) | 933, 1341, 1381, 1920, 2648, 3177, 3246, 3268 |
| TseFI | GTSAC | 2 cut(s) | 891, 964 |
| TseI | GCWGC | 4 cut(s) | 726, 788, 1940, 3189 |
| Tsp45I | GTSAC | 2 cut(s) | 891, 964 |
| TspGWI | ACGGA | 3 cut(s) | 477, 1913, 2486 |
| TspRI | CASTG | 8 cut(s) | 933, 1341, 1381, 1920, 2648, 3177, 3246, 3268 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2674 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 359, 866, 1000, 1142 |
| VpaK11BI | GGWCC | 4 cut(s) | 854, 1753, 2201, 3048 |
| VspI | ATTAAT | 1 cut(s) | 1683 |
| XceI | RCATGY | 3 cut(s) | 936, 1128, 2000 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1143 |
| XhoI | CTCGAG | 1 cut(s) | 1691 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2234, 2944 |
| XspI | CTAG | 4 cut(s) | 744, 1160, 1734, 2093 |
| ZrmI | AGTACT | 1 cut(s) | 1331 |
| Zsp2I | ATGCAT | 2 cut(s) | 2145, 3370 |