RchiOBHm_Chr3g0488221

AAA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000279
Physical Location & Seq
Forward (+)
35848942 .. 35851439
2498 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45260

Sequence Viewer

Length: 1770 bp
ATGGTAGGTTTGTACACCCACTTACCAACTTCTTGCATTTCACTTAAAGTGGTGAAGGACATGGTCAGAGCTTTGGGTTTGCTTAAGTCTATTGAATCTTCATTGCATACTACTGTTGTTGCTAATGAAGGGTTGAAGTTAGTCCTCAAAGATTCCAAAGTTCCAGGAAGCATTGTTGGTTGCCTTCCGCAGTTGAGAACAGAGTGTACAAACACATTAAAGTCACTTCCAATGGAATTCTCTGTTCCTATTAACAAATATGCATTAATGAACTTCTGCCTAGAAAATGCTTGCTTAATATTCTGTACTGCATCAACTTCTTCCAAATTGCATGATGTAGCAGGAACAAGACCTTTGGAATTGTTGGTCATTGATGAAGCTGCTCAGCTTAAAGAATGTGAATCAGCAATTCCTTTACAACTATCTGGTCTCCACCATGCTATCCTTGTAGGAGATGAGAGGCAACCCCCTGCCATGGTCCAAAGCGAGATTGCAGCTAGTGCTGATTTTGGAAGAAGTTTGTTTGGAAGGCTGACAAAGTTGGGACACAAGAAGCACCTACTCAATGTCCAGTACAGGATGCATCCATCCATCAGTTTATTTCTAAAAAGGGAGTTCTACAACAACCAGGTAGTAGATGGTCCAAATGTCAAAGAAAGAAGCTATGAGAGGTGCTTCCTCAAGGGAAAAATGTACCAATCCTATTCCTTCATAAATGTAGCCGATGGAAATGAAGAATTTGATCACAGATTTAGTCGGAAAAATATGGTGGAGGTTGTTGTAGTCTCTGGGATAGTAGCAAGCCTTTATAAAGGTAATTATTGTAGTAAGTTGGTCGATGCTTATATTTATGTGATACATTGCAAAGACCTAAAAATTGGGTTTTACTTTTTCTTTTTTGCCACAGAATTTATTGGAACAAAGAAGAAAGTTAGTATTGGGGTCATATCACCATACAAGGCTCAAGTTTATGCAATTCAAGAGATACTCAGAAAATATACTGAAACTTGTGATACTGGATTCTCCGTAAGTGTGCGATCTGTTGATGGGTTCCAAGGTGGTGAAGAAGATGTGATAATTATATCTACTGTCCGATGTAATGGGAAGGGGTCAGTTGGTTTCTTGTCAAACCGGCAAAGAGCAAATGTTGCCTTAACACGTGCAAGCAACTTGGCCCAGGCTATTACAGCTGCCCTGCTGGAGCTTGACCAACTTCATTCTCTGCTTCATATCGACTCTATGCTGTTCAAAAACGCTATATGGAAGGTTTGCTTCACTGATGACTTCCGGAACTCCATAACTAAAATTAAAGACATTGTGATTCTTCGGGAAGTACTCGCGTTATTAACCAAGCTTTCGAGTGGATGGCGCCGACCTCACAAGGATAAAGGAAATTTAGTGTATGATGGGACTTCTGCTCAGCTGTTAGAAAAGTATAAAATCAAAGGGTGCTTGAATCTCAGTTGGACTGTAGATATTCTCCAGGAGAATGCACATTACGTCCAAGTTATGAAGTTTTGGGATATTTTGCCATTTTCTCATATACCAGAACTAGCAAAGCGTCTTGACATTGTTTTCGGAAATTTTACAGTGGATAAGATGAACCGCTGCAGGCACAAATGCATTGACAGGGATACTGTTGTTCCAATGAGATGGCCAGTGGTTTTCAGAAATTTTCCTATAGCTGATCATGAGGAGTTCCTTTCAAAACCATTGTCTTCTTTCAGCATAACAACTAATCGAGAAACAGCAACTTCAACATATGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

589

Amino Acids

66.35

Weight (kDa)

8.97

Isoelectric Point (pI)

37.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_11 PF13086 88 - 163 1.4e-13 AAA domain
AAA_12 PF13087 171 - 390 1.8e-46 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 810
AccB1I GGYRCC 1 cut(s) 1368
AccII CGCG 1 cut(s) 1340
AccIII TCCGGA 1 cut(s) 1287
AciI CCGC 2 cut(s) 188, 1606
AcoI YGGCCR 1 cut(s) 1655
AcsI RAATTY 6 cut(s) 236, 737, 908, 1393, 1582, 1672
AcvI CACGTG 1 cut(s) 1160
AcyI GRCGYC 1 cut(s) 1369
AfaI GTAC 6 cut(s) 14, 208, 307, 575, 695, 1335
AfiI CCNNNNNNNGG 1 cut(s) 475
AflII CTTAAG 1 cut(s) 83
AflIII ACRYGT 1 cut(s) 1157
AgsI TTSAA 7 cut(s) 95, 136, 980, 1249, 1456, 1707, 1758
AjnI CCWGG 4 cut(s) 163, 627, 1176, 1482
Alw26I GTCTC 2 cut(s) 434, 790
Aor13HI TCCGGA 1 cut(s) 1287
AoxI GGCC 2 cut(s) 1173, 1655
ApeKI GCWGC 4 cut(s) 380, 494, 1190, 1608
ApoI RAATTY 6 cut(s) 236, 737, 908, 1393, 1582, 1672
ArsI GACNNNNNNTTYG 4 cut(s) 1559, 1591, 1700, 1732
AseI ATTAAT 1 cut(s) 266
AspLEI GCGC 1 cut(s) 1371
AspS9I GGNCC 3 cut(s) 478, 641, 1174
AsuHPI GGTGA 3 cut(s) 64, 942, 1073
AvaII GGWCC 2 cut(s) 478, 641
BaeI ACNNNNGTAYC 2 cut(s) 1626, 1659
BalI TGGCCA 1 cut(s) 1657
BanI GGYRCC 1 cut(s) 1368
BbrPI CACGTG 1 cut(s) 1160
BbsI GAAGAC 1 cut(s) 1710
BbvI GCAGC 4 cut(s) 367, 506, 1177, 1595
BccI CCATC 8 cut(s) 595, 599, 632, 719, 1040, 1359, 1400, 1647
BciT130I CCWGG 4 cut(s) 165, 629, 1178, 1484
BciVI GTATCC 1 cut(s) 1627
BclI TGATCA 2 cut(s) 742, 1687
BcoDI GTCTC 2 cut(s) 434, 790
BfaI CTAG 3 cut(s) 281, 498, 1553
BfmI CTRYAG 3 cut(s) 1470, 1609, 1680
BfoI RGCGCY 1 cut(s) 1372
BfrI CTTAAG 1 cut(s) 83
BfuI GTATCC 1 cut(s) 1627
BisI GCNGC 4 cut(s) 381, 495, 1191, 1609
BlpI GCTNAGC 2 cut(s) 384, 1419
BlsI GCNGC 4 cut(s) 382, 496, 1192, 1610
BmcAI AGTACT 1 cut(s) 1335
Bme1390I CCNGG 4 cut(s) 165, 629, 1178, 1484
Bme18I GGWCC 2 cut(s) 478, 641
BmgT120I GGNCC 3 cut(s) 478, 641, 1174
BmiI GGNNCC 2 cut(s) 1052, 1370
BmrFI CCNGG 4 cut(s) 165, 629, 1178, 1484
BmsI GCATC 4 cut(s) 320, 570, 592, 829
BpiI GAAGAC 1 cut(s) 1710
BpmI CTGGAG 2 cut(s) 1220, 1466
Bpu1102I GCTNAGC 2 cut(s) 384, 1419
BpuEI CTTGAG 2 cut(s) 665, 948
BsaAI YACGTR 1 cut(s) 1160
BsaHI GRCGYC 1 cut(s) 1369
BsaI GGTCTC 1 cut(s) 434
BsaJI CCNNGG 3 cut(s) 474, 1054, 1176
BsaWI WCCGGW 1 cut(s) 1287
Bsc4I CCNNNNNNNGG 1 cut(s) 475
Bse118I RCCGGY 1 cut(s) 1131
Bse1I ACTGG 3 cut(s) 571, 1021, 1658
Bse3DI GCAATG 2 cut(s) 101, 859
BseAI TCCGGA 1 cut(s) 1287
BseBI CCWGG 4 cut(s) 165, 629, 1178, 1484
BseDI CCNNGG 3 cut(s) 474, 1054, 1176
BseGI GGATG 4 cut(s) 583, 585, 587, 1370
BseLI CCNNNNNNNGG 1 cut(s) 475
BseMI GCAATG 2 cut(s) 101, 859
BseMII CTCAG 4 cut(s) 398, 1003, 1433, 1474
BseNI ACTGG 3 cut(s) 571, 1021, 1658
BseRI GAGGAG 1 cut(s) 1709
BseXI GCAGC 4 cut(s) 367, 506, 1177, 1595
Bsh1236I CGCG 1 cut(s) 1340
BshFI GGCC 2 cut(s) 1175, 1657
BshNI GGYRCC 1 cut(s) 1368
BsiSI CCGG 2 cut(s) 1132, 1288
BslFI GGGAC 2 cut(s) 558, 1423
BslI CCNNNNNNNGG 1 cut(s) 475
BsmAI GTCTC 2 cut(s) 434, 790
BsmFI GGGAC 2 cut(s) 558, 1423
BsmI GAATGC 1 cut(s) 1495
BsnI GGCC 2 cut(s) 1175, 1657
Bso31I GGTCTC 1 cut(s) 434
Bsp13I TCCGGA 1 cut(s) 1287
Bsp1407I TGTACA 2 cut(s) 12, 206
Bsp143I GATC 3 cut(s) 742, 1037, 1687
Bsp1720I GCTNAGC 2 cut(s) 384, 1419
Bsp19I CCATGG 1 cut(s) 474
BspACI CCGC 2 cut(s) 188, 1606
BspANI GGCC 2 cut(s) 1175, 1657
BspCNI CTCAG 4 cut(s) 397, 1002, 1432, 1473
BspEI TCCGGA 1 cut(s) 1287
BspFNI CGCG 1 cut(s) 1340
BspHI TCATGA 1 cut(s) 1690
BspLI GGNNCC 2 cut(s) 1052, 1370
BspMAI CTGCAG 1 cut(s) 1613
BspT107I GGYRCC 1 cut(s) 1368
BspTI CTTAAG 1 cut(s) 83
BspTNI GGTCTC 1 cut(s) 434
BsrDI GCAATG 2 cut(s) 101, 859
BsrFI RCCGGY 1 cut(s) 1131
BsrGI TGTACA 2 cut(s) 12, 206
BsrI ACTGG 3 cut(s) 571, 1021, 1658
BssAI RCCGGY 1 cut(s) 1131
BssECI CCNNGG 3 cut(s) 474, 1054, 1176
BssMI GATC 3 cut(s) 742, 1037, 1687
BssNI GRCGYC 1 cut(s) 1369
BssT1I CCWWGG 2 cut(s) 474, 1054
Bst2UI CCWGG 4 cut(s) 165, 629, 1178, 1484
Bst4CI ACNGT 5 cut(s) 115, 1090, 1471, 1591, 1639
BstACI GRCGYC 1 cut(s) 1369
BstAFI CTTAAG 1 cut(s) 83
BstAPI GCANNNNNTGC 2 cut(s) 500, 1148
BstAUI TGTACA 2 cut(s) 12, 206
BstBAI YACGTR 1 cut(s) 1160
BstC8I GCNNGC 4 cut(s) 292, 802, 1165, 1613
BstDEI CTNAG 4 cut(s) 384, 989, 1419, 1460
BstDSI CCRYGG 1 cut(s) 474
BstF5I GGATG 4 cut(s) 583, 585, 587, 1370
BstFNI CGCG 1 cut(s) 1340
BstH2I RGCGCY 1 cut(s) 1372
BstHHI GCGC 1 cut(s) 1371
BstKTI GATC 3 cut(s) 745, 1040, 1690
BstMAI GTCTC 2 cut(s) 434, 790
BstMBI GATC 3 cut(s) 742, 1037, 1687
BstMWI GCNNNNNNNGC 3 cut(s) 500, 1148, 1187
BstNI CCWGG 4 cut(s) 165, 629, 1178, 1484
BstSCI CCNGG 4 cut(s) 163, 627, 1176, 1482
BstSFI CTRYAG 3 cut(s) 1470, 1609, 1680
BstUI CGCG 1 cut(s) 1340
BstV1I GCAGC 4 cut(s) 367, 506, 1177, 1595
BstV2I GAAGAC 1 cut(s) 1710
BstXI CCANNNNNNTGG 1 cut(s) 1653
BsuI GTATCC 1 cut(s) 1627
BsuRI GGCC 2 cut(s) 1175, 1657
BtgI CCRYGG 1 cut(s) 474
BtsCI GGATG 4 cut(s) 583, 585, 587, 1370
BtsIMutI CAGTG 3 cut(s) 1275, 1596, 1665
Cac8I GCNNGC 4 cut(s) 292, 802, 1165, 1613
CciI TCATGA 1 cut(s) 1690
CfoI GCGC 1 cut(s) 1371
Cfr10I RCCGGY 1 cut(s) 1131
Cfr13I GGNCC 3 cut(s) 478, 641, 1174
CseI GACGC 1 cut(s) 1550
CsiI ACCWGGT 1 cut(s) 627
Csp6I GTAC 6 cut(s) 13, 207, 306, 574, 694, 1334
CviAII CATG 5 cut(s) 61, 332, 437, 475, 1691
CviQI GTAC 6 cut(s) 13, 207, 306, 574, 694, 1334
DdeI CTNAG 4 cut(s) 384, 989, 1419, 1460
DinI GGCGCC 1 cut(s) 1370
DpnI GATC 3 cut(s) 744, 1039, 1689
DpnII GATC 3 cut(s) 742, 1037, 1687
EaeI YGGCCR 1 cut(s) 1655
Eco130I CCWWGG 2 cut(s) 474, 1054
Eco31I GGTCTC 1 cut(s) 434
Eco47I GGWCC 2 cut(s) 478, 641
Eco72I CACGTG 1 cut(s) 1160
EcoRI GAATTC 1 cut(s) 236
EcoRII CCWGG 4 cut(s) 163, 627, 1176, 1482
EcoT14I CCWWGG 2 cut(s) 474, 1054
EcoT22I ATGCAT 3 cut(s) 265, 585, 1625
EgeI GGCGCC 1 cut(s) 1370
EheI GGCGCC 1 cut(s) 1370
ErhI CCWWGG 2 cut(s) 474, 1054
FaeI CATG 5 cut(s) 64, 335, 440, 478, 1694
FalI AAGNNNNNCTT 2 cut(s) 1256, 1288
FaqI GGGAC 2 cut(s) 558, 1423
FatI CATG 5 cut(s) 60, 331, 436, 474, 1690
FauNDI CATATG 1 cut(s) 1762
FbaI TGATCA 2 cut(s) 742, 1687
Fnu4HI GCNGC 4 cut(s) 381, 495, 1191, 1609
FokI GGATG 4 cut(s) 570, 574, 592, 1377
Fsp4HI GCNGC 4 cut(s) 381, 495, 1191, 1609
FspBI CTAG 3 cut(s) 281, 498, 1553
GlaI GCGC 1 cut(s) 1370
GluI GCNGC 4 cut(s) 381, 495, 1191, 1609
GsuI CTGGAG 2 cut(s) 1220, 1466
HaeII RGCGCY 1 cut(s) 1372
HaeIII GGCC 2 cut(s) 1175, 1657
HapII CCGG 2 cut(s) 1132, 1288
HgaI GACGC 1 cut(s) 1550
HhaI GCGC 1 cut(s) 1371
Hin1I GRCGYC 1 cut(s) 1369
Hin1II CATG 5 cut(s) 64, 335, 440, 478, 1694
Hin6I GCGC 1 cut(s) 1369
HinP1I GCGC 1 cut(s) 1369
HindIII AAGCTT 1 cut(s) 1352
HinfI GANTC 7 cut(s) 95, 152, 401, 1020, 1235, 1321, 1456
HpaII CCGG 2 cut(s) 1132, 1288
HphI GGTGA 3 cut(s) 64, 942, 1073
Hpy166II GTNNAC 2 cut(s) 15, 207
Hpy188I TCNGA 6 cut(s) 68, 759, 992, 1094, 1580, 1670
Hpy188III TCNNGA 6 cut(s) 980, 1288, 1328, 1565, 1691, 1742
Hpy8I GTNNAC 2 cut(s) 15, 207
HpyAV CCTTC 7 cut(s) 49, 122, 194, 522, 718, 1099, 1258
HpyCH4III ACNGT 5 cut(s) 115, 1090, 1471, 1591, 1639
HpyCH4IV ACGT 2 cut(s) 1159, 1500
HpyF10VI GCNNNNNNNGC 3 cut(s) 500, 1148, 1187
HpyF3I CTNAG 4 cut(s) 384, 989, 1419, 1460
HpySE526I ACGT 2 cut(s) 1159, 1500
Hsp92I GRCGYC 1 cut(s) 1369
Hsp92II CATG 5 cut(s) 64, 335, 440, 478, 1694
HspAI GCGC 1 cut(s) 1369
KasI GGCGCC 1 cut(s) 1368
Kpn2I TCCGGA 1 cut(s) 1287
Ksp22I TGATCA 2 cut(s) 742, 1687
Kzo9I GATC 3 cut(s) 742, 1037, 1687
LmnI GCTCC 1 cut(s) 1201
Lsp1109I GCAGC 4 cut(s) 367, 506, 1177, 1595
LweI GCATC 4 cut(s) 320, 570, 592, 829
MabI ACCWGGT 1 cut(s) 627
MaeI CTAG 3 cut(s) 281, 498, 1553
MaeII ACGT 2 cut(s) 1159, 1500
MaeIII GTNAC 1 cut(s) 222
MalI GATC 3 cut(s) 744, 1039, 1689
MboI GATC 3 cut(s) 742, 1037, 1687
MboII GAAGA 9 cut(s) 90, 312, 525, 746, 937, 1076, 1079, 1316, 1710
MlsI TGGCCA 1 cut(s) 1657
MluNI TGGCCA 1 cut(s) 1657
Mly113I GGCGCC 1 cut(s) 1369
MlyI GAGTC 1 cut(s) 1229
MmeI TCCRAC 2 cut(s) 737, 1445
MnlI CCTC 7 cut(s) 155, 453, 663, 689, 766, 1386, 1687
Mox20I TGGCCA 1 cut(s) 1657
Mph1103I ATGCAT 3 cut(s) 265, 585, 1625
MroI TCCGGA 1 cut(s) 1287
MscI TGGCCA 1 cut(s) 1657
MslI CAYNNNNRTG 1 cut(s) 1765
Msp20I TGGCCA 1 cut(s) 1657
MspA1I CMGCKG 3 cut(s) 1190, 1423, 1608
MspCI CTTAAG 1 cut(s) 83
MspI CCGG 2 cut(s) 1132, 1288
MspR9I CCNGG 4 cut(s) 165, 629, 1178, 1484
Mva1269I GAATGC 1 cut(s) 1495
MvaI CCWGG 4 cut(s) 165, 629, 1178, 1484
MvnI CGCG 1 cut(s) 1340
MwoI GCNNNNNNNGC 3 cut(s) 500, 1148, 1187
NarI GGCGCC 1 cut(s) 1369
NcoI CCATGG 1 cut(s) 474
NdeI CATATG 1 cut(s) 1762
NdeII GATC 3 cut(s) 742, 1037, 1687
NlaIII CATG 5 cut(s) 64, 335, 440, 478, 1694
NlaIV GGNNCC 2 cut(s) 1052, 1370
NmuCI GTSAC 1 cut(s) 222
NsiI ATGCAT 3 cut(s) 265, 585, 1625
PagI TCATGA 1 cut(s) 1690
PctI GAATGC 1 cut(s) 1495
PfeI GAWTC 6 cut(s) 95, 152, 401, 1020, 1321, 1456
PflFI GACNNNGTC 1 cut(s) 62
PfoI TCCNGGA 2 cut(s) 163, 1482
PkrI GCNGC 4 cut(s) 382, 496, 1192, 1610
PleI GAGTC 1 cut(s) 1229
PluTI GGCGCC 1 cut(s) 1372
PmaCI CACGTG 1 cut(s) 1160
PmlI CACGTG 1 cut(s) 1160
PpsI GAGTC 1 cut(s) 1229
Ppu21I YACGTR 1 cut(s) 1160
PshBI ATTAAT 1 cut(s) 266
PsiI TTATAA 1 cut(s) 810
Psp6I CCWGG 4 cut(s) 163, 627, 1176, 1482
PspCI CACGTG 1 cut(s) 1160
PspGI CCWGG 4 cut(s) 163, 627, 1176, 1482
PspN4I GGNNCC 2 cut(s) 1052, 1370
PspPI GGNCC 3 cut(s) 478, 641, 1174
PsrI GAACNNNNNNTAC 2 cut(s) 190, 222
PstI CTGCAG 1 cut(s) 1613
PsyI GACNNNGTC 1 cut(s) 62
PvuII CAGCTG 2 cut(s) 1190, 1423
RsaI GTAC 6 cut(s) 14, 208, 307, 575, 695, 1335
RsaNI GTAC 6 cut(s) 13, 207, 306, 574, 694, 1334
RseI CAYNNNNRTG 1 cut(s) 1765
SatI GCNGC 4 cut(s) 381, 495, 1191, 1609
Sau3AI GATC 3 cut(s) 742, 1037, 1687
Sau96I GGNCC 3 cut(s) 478, 641, 1174
ScaI AGTACT 1 cut(s) 1335
SchI GAGTC 1 cut(s) 1229
ScrFI CCNGG 4 cut(s) 165, 629, 1178, 1484
SexAI ACCWGGT 1 cut(s) 627
SfaNI GCATC 4 cut(s) 320, 570, 592, 829
SfcI CTRYAG 3 cut(s) 1470, 1609, 1680
SfoI GGCGCC 1 cut(s) 1370
SinI GGWCC 2 cut(s) 478, 641
SmiMI CAYNNNNRTG 1 cut(s) 1765
SmlI CTYRAG 3 cut(s) 83, 680, 963
SmoI CTYRAG 3 cut(s) 83, 680, 963
SsiI CCGC 2 cut(s) 188, 1606
SspDI GGCGCC 1 cut(s) 1368
SspI AATATT 1 cut(s) 300
SspMI CTAG 3 cut(s) 281, 498, 1553
StyD4I CCNGG 4 cut(s) 163, 627, 1176, 1482
StyI CCWWGG 2 cut(s) 474, 1054
TaaI ACNGT 5 cut(s) 115, 1090, 1471, 1591, 1639
TaiI ACGT 2 cut(s) 1162, 1503
TaqI TCGA 4 cut(s) 837, 1233, 1358, 1741
TatI WGTACW 5 cut(s) 12, 206, 305, 573, 1333
TfiI GAWTC 6 cut(s) 95, 152, 401, 1020, 1321, 1456
TscAI CASTG 3 cut(s) 1282, 1596, 1665
TseFI GTSAC 1 cut(s) 222
TseI GCWGC 4 cut(s) 380, 494, 1190, 1608
Tsp45I GTSAC 1 cut(s) 222
TspGWI ACGGA 1 cut(s) 1015
TspRI CASTG 3 cut(s) 1282, 1596, 1665
Tth111I GACNNNGTC 1 cut(s) 62
Vha464I CTTAAG 1 cut(s) 83
VpaK11BI GGWCC 2 cut(s) 478, 641
VspI ATTAAT 1 cut(s) 266
XapI RAATTY 6 cut(s) 236, 737, 908, 1393, 1582, 1672
XcmI CCANNNNNNNNNTGG 1 cut(s) 635
XspI CTAG 3 cut(s) 281, 498, 1553
ZrmI AGTACT 1 cut(s) 1335
Zsp2I ATGCAT 3 cut(s) 265, 585, 1625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.