Rh6AG133700

AAA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000279
Physical Location & Seq
Forward (+)
20228293 .. 20233656
5364 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG133700.1

Sequence Viewer

Length: 1713 bp
ATGGACAAGGAGAGTAGGAAGCCAAAGAAAGAAGTTGGAGCTATTGTTGATCCACCAGAAAAGCAAAAGATAAGTGTTAACAATAACTACGTAACTACGATTCCTGAGACGTTCTCGACTGTAACGAGTTACATGAAAGCATTTGTTCCTTCGCTTCTTGAGGAAACACATGATGAATTACGCTCAAGCATGATGTCCCTGTCACGGGCACCAACTTGTGAAATTCTAACAGTTGAAACTTCCAAGGATCATAAACCTCCCAAAGACTTGTTTTACCAAATTACATATAAGAGGAGACAAGGAGAAGATTATGTAGGAGCATATGAGCCAGATTCTGGTGATATCATTGCCTTGACCAATGTGAGACCAAAATACATTGATGATTTGAATAGATCCAGAAATTCTTATCTTATTGCTTATGTTATTGGATCACAACACGGAAGTTCTGATAAGCTTCCGATACTCGCATCAAAGTCTATCAATGGAGGAGGAGAGTCAGGAAACAAAAAGATTAAGAGCAAGAGTGATACACTTTTTGCTGTTTACCTCATGAACATGACAACAAACGTACGTGTATGGAAAGCTCTGAACTCAGAATTAGGCTCAAACACAAATCTGTTTAAGAAGGTTCTGCAAGTTCAACCACCAAATTCATCACATGGTCAGAATTCTTGCACAATTTGTTTTTCCAATTATAACGGCTGCCCTGAGCTTTCTACTAGATGGCCCACAATGTGTTCTGATCTAAATGATTCCCAAGAGGCTGCAGTTTTGAACTGTATCAGTTTGAATTCTGGTGATAGGAGCTCAGCAAGTGATGATGAAAATGATATTCTAACGTTTGAGCAGGTTGTGAAGGAGAGACAGTACTCACTGTATTTGAAAAAGAGAAGGGAAAAATACAATAAAGACAGTGATAATAGGAGCTCATCAAGTGATGTTCACAATGGTTTTTTGACACTTGAGGAGTTTGTGAAGGAGAAACAGTATTCACAGTCTTTGAAAAAGGGAAAGGAAAGATGCGACAATGACGGTGAAGATACTGATAACACAAACTCATCAAGTGATGATGAAACTGATGTTTTGACGTTTGAGGAGTTTGTGAAGGAGAAACAGAATTACATTGGTGAGAATCTGAAGCTGTGTATGGTTTACTTTGCCAATGAATTTAACCACTCCATCGCAAAAATTAAAGACCCCAAGATTCGTCGGGAAGTGGTTTCTCTACTGAGAAAGCTTTCAAGTGGTTGGCGCCAATCTCATGAGGCGAAACTTTATGGTAGGACTTCTTGTCAGCTGTTAGAGACGTATCAAGTTGATGGGATCCTGAATTTAATTTGGACAGTGGACATTATCCAAGAGAATTCACAACATTTACAGATTATACAAGTTTGGGAGATTGTGCCACATTCTGATGTTCCAAATCTCACAAAGCGTCTTGACATCATTTTCGGGAGTTACACAGTGGACAAGGTTAATCGCTGCAAACAAAGAAGTCTTGAGGGGAACGTTGTAGTTCCAAATAGATGGCCAGTGGAATATTCAAGCAGTTGCAGTGAATCTGATCCTCTGGAGTTCCTTTCAACACCGTTATCTTGTCTCACTTTGAGGGACGAGCCAGCTGAAAATTCAACTGCTTCTTATATGAGAAATAATGCATCCAACATGAGTGGAAAGGAGGCCACCGGATCAAAACCAAGATGTATGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

570

Amino Acids

64.53

Weight (kDa)

5.98

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF6469 PF20073 81 - 197 7.6e-10 Domain of unknown function (DUF6469)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 696
Acc36I ACCTGC 1 cut(s) 838
AccB1I GGYRCC 2 cut(s) 208, 1251
AccB7I CCANNNNNTGG 1 cut(s) 335
AclI AACGTT 2 cut(s) 839, 1509
AclWI GGATC 8 cut(s) 44, 255, 387, 436, 1318, 1331, 1559, 1696
AcoI YGGCCR 1 cut(s) 1529
AcsI RAATTY 9 cut(s) 222, 400, 649, 667, 790, 1166, 1330, 1363, 1627
AcuI CTGAAG 1 cut(s) 1157
AcyI GRCGYC 1 cut(s) 1252
AdeI CACNNNGTG 1 cut(s) 735
AfaI GTAC 2 cut(s) 570, 869
AfiI CCNNNNNNNGG 3 cut(s) 204, 205, 335
AflIII ACRYGT 1 cut(s) 571
AhdI GACNNNNNGTC 1 cut(s) 1290
Alw21I GWGCWC 2 cut(s) 809, 929
Alw26I GTCTC 6 cut(s) 101, 289, 358, 856, 1298, 1604
AlwI GGATC 8 cut(s) 44, 255, 387, 436, 1318, 1331, 1559, 1696
AlwNI CAGNNNCTG 1 cut(s) 335
AoxI GGCC 3 cut(s) 725, 1529, 1680
ApeKI GCWGC 3 cut(s) 702, 764, 1482
ApoI RAATTY 9 cut(s) 222, 400, 649, 667, 790, 1166, 1330, 1363, 1627
ArsI GACNNNNNNTTYG 2 cut(s) 1433, 1465
Asp700I GAANNNNTTC 1 cut(s) 1237
AspLEI GCGC 1 cut(s) 1254
AspS9I GGNCC 1 cut(s) 726
AsuHPI GGTGA 4 cut(s) 350, 809, 1046, 1139
BaeGI GKGCMC 1 cut(s) 211
BalI TGGCCA 1 cut(s) 1531
BamHI GGATCC 1 cut(s) 1323
BanI GGYRCC 2 cut(s) 208, 1251
BanII GRGCYC 2 cut(s) 809, 929
Bbv12I GWGCWC 2 cut(s) 809, 929
BbvI GCAGC 3 cut(s) 689, 751, 1469
BccI CCATC 4 cut(s) 717, 1187, 1313, 1521
BceAI ACGGC 1 cut(s) 715
BcoDI GTCTC 6 cut(s) 101, 289, 358, 856, 1298, 1604
BfaI CTAG 1 cut(s) 720
BfmI CTRYAG 1 cut(s) 765
BfoI RGCGCY 1 cut(s) 1255
BfuAI ACCTGC 1 cut(s) 838
BisI GCNGC 3 cut(s) 703, 765, 1483
BlpI GCTNAGC 1 cut(s) 808
BlsI GCNGC 3 cut(s) 704, 766, 1484
BmcAI AGTACT 1 cut(s) 869
BmeRI GACNNNNNGTC 1 cut(s) 1290
BmgT120I GGNCC 1 cut(s) 726
BmiI GGNNCC 3 cut(s) 210, 1253, 1325
BmsI GCATC 3 cut(s) 476, 1010, 1667
BplI GAGNNNNNCTC 2 cut(s) 98, 130
BpmI CTGGAG 1 cut(s) 1592
Bpu10I CCTNAGC 1 cut(s) 708
Bpu1102I GCTNAGC 1 cut(s) 808
BpuEI CTTGAG 4 cut(s) 169, 179, 983, 1520
BsaAI YACGTR 2 cut(s) 91, 572
BsaHI GRCGYC 1 cut(s) 1252
BsaI GGTCTC 1 cut(s) 358
BsaJI CCNNGG 1 cut(s) 243
BsaWI WCCGGW 1 cut(s) 1685
BsaXI ACNNNNNCTCC 6 cut(s) 30, 60, 851, 881, 971, 1001
Bsc4I CCNNNNNNNGG 3 cut(s) 204, 205, 335
Bse1I ACTGG 1 cut(s) 1532
Bse3DI GCAATG 1 cut(s) 345
BseDI CCNNGG 1 cut(s) 243
BseGI GGATG 1 cut(s) 1658
BseLI CCNNNNNNNGG 3 cut(s) 204, 205, 335
BseMI GCAATG 1 cut(s) 345
BseMII CTCAG 5 cut(s) 96, 606, 699, 822, 1220
BseNI ACTGG 1 cut(s) 1532
BseRI GAGGAG 5 cut(s) 307, 501, 504, 980, 1109
BseSI GKGCMC 1 cut(s) 211
BseXI GCAGC 3 cut(s) 689, 751, 1469
BshFI GGCC 3 cut(s) 727, 1531, 1682
BshNI GGYRCC 2 cut(s) 208, 1251
BsiHKAI GWGCWC 2 cut(s) 809, 929
BsiSI CCGG 1 cut(s) 1686
BsiWI CGTACG 1 cut(s) 568
BslFI GGGAC 2 cut(s) 181, 1625
BslI CCNNNNNNNGG 3 cut(s) 204, 205, 335
BsmAI GTCTC 6 cut(s) 101, 289, 358, 856, 1298, 1604
BsmBI CGTCTC 2 cut(s) 101, 1298
BsmFI GGGAC 2 cut(s) 181, 1625
BsnI GGCC 3 cut(s) 727, 1531, 1682
Bso31I GGTCTC 1 cut(s) 358
Bsp1286I GDGCHC 3 cut(s) 211, 809, 929
Bsp143I GATC 8 cut(s) 49, 247, 392, 428, 742, 1323, 1564, 1688
Bsp1720I GCTNAGC 1 cut(s) 808
BspANI GGCC 3 cut(s) 727, 1531, 1682
BspCNI CTCAG 5 cut(s) 97, 605, 700, 821, 1221
BspHI TCATGA 2 cut(s) 549, 1261
BspLI GGNNCC 3 cut(s) 210, 1253, 1325
BspMAI CTGCAG 1 cut(s) 769
BspMI ACCTGC 1 cut(s) 838
BspPI GGATC 8 cut(s) 44, 255, 387, 436, 1318, 1331, 1559, 1696
BspT107I GGYRCC 2 cut(s) 208, 1251
BspTNI GGTCTC 1 cut(s) 358
BsrDI GCAATG 1 cut(s) 345
BsrI ACTGG 1 cut(s) 1532
BssECI CCNNGG 1 cut(s) 243
BssMI GATC 8 cut(s) 49, 247, 392, 428, 742, 1323, 1564, 1688
BssNI GRCGYC 1 cut(s) 1252
BssT1I CCWWGG 1 cut(s) 243
BstACI GRCGYC 1 cut(s) 1252
BstBAI YACGTR 2 cut(s) 91, 572
BstC8I GCNNGC 1 cut(s) 1620
BstDEI CTNAG 5 cut(s) 105, 592, 708, 808, 1229
BstF5I GGATG 1 cut(s) 1658
BstH2I RGCGCY 1 cut(s) 1255
BstHHI GCGC 1 cut(s) 1254
BstKTI GATC 8 cut(s) 52, 250, 395, 431, 745, 1326, 1567, 1691
BstMAI GTCTC 6 cut(s) 101, 289, 358, 856, 1298, 1604
BstMBI GATC 8 cut(s) 49, 247, 392, 428, 742, 1323, 1564, 1688
BstSFI CTRYAG 1 cut(s) 765
BstSLI GKGCMC 1 cut(s) 211
BstSNI TACGTA 1 cut(s) 91
BstV1I GCAGC 3 cut(s) 689, 751, 1469
BstX2I RGATCY 2 cut(s) 392, 1323
BstXI CCANNNNNNTGG 1 cut(s) 1527
BstYI RGATCY 2 cut(s) 392, 1323
BsuRI GGCC 3 cut(s) 727, 1531, 1682
BtgZI GCGATG 1 cut(s) 1165
BtsCI GGATG 1 cut(s) 1658
BtsI GCAGTG 1 cut(s) 1561
BtsIMutI CAGTG 6 cut(s) 872, 919, 1350, 1470, 1539, 1561
BveI ACCTGC 1 cut(s) 838
Cac8I GCNNGC 1 cut(s) 1620
CaiI CAGNNNCTG 1 cut(s) 335
CciI TCATGA 2 cut(s) 549, 1261
CfoI GCGC 1 cut(s) 1254
Cfr13I GGNCC 1 cut(s) 726
CseI GACGC 1 cut(s) 1424
Csp6I GTAC 2 cut(s) 569, 868
CspCI CAANNNNNGTGG 2 cut(s) 1651, 1686
CviAII CATG 8 cut(s) 133, 170, 190, 550, 556, 659, 1262, 1666
CviQI GTAC 2 cut(s) 569, 868
DdeI CTNAG 5 cut(s) 105, 592, 708, 808, 1229
DinI GGCGCC 1 cut(s) 1253
DpnI GATC 8 cut(s) 51, 249, 394, 430, 744, 1325, 1566, 1690
DpnII GATC 8 cut(s) 49, 247, 392, 428, 742, 1323, 1564, 1688
DraIII CACNNNGTG 1 cut(s) 735
DriI GACNNNNNGTC 1 cut(s) 1290
EaeI YGGCCR 1 cut(s) 1529
Eam1105I GACNNNNNGTC 1 cut(s) 1290
Ecl136II GAGCTC 2 cut(s) 807, 927
Eco105I TACGTA 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 243
Eco24I GRGCYC 2 cut(s) 809, 929
Eco31I GGTCTC 1 cut(s) 358
Eco32I GATATC 1 cut(s) 343
Eco53kI GAGCTC 2 cut(s) 807, 927
Eco57I CTGAAG 1 cut(s) 1157
EcoICRI GAGCTC 2 cut(s) 807, 927
EcoRI GAATTC 3 cut(s) 667, 790, 1363
EcoRV GATATC 1 cut(s) 343
EcoT14I CCWWGG 1 cut(s) 243
EcoT22I ATGCAT 1 cut(s) 1660
EcoT38I GRGCYC 2 cut(s) 809, 929
EgeI GGCGCC 1 cut(s) 1253
EheI GGCGCC 1 cut(s) 1253
ErhI CCWWGG 1 cut(s) 243
Esp3I CGTCTC 2 cut(s) 101, 1298
FaeI CATG 8 cut(s) 136, 173, 193, 553, 559, 662, 1265, 1669
FaqI GGGAC 2 cut(s) 181, 1625
FatI CATG 8 cut(s) 132, 169, 189, 549, 555, 658, 1261, 1665
FauNDI CATATG 1 cut(s) 322
Fnu4HI GCNGC 3 cut(s) 703, 765, 1483
FokI GGATG 1 cut(s) 1645
FriOI GRGCYC 2 cut(s) 809, 929
Fsp4HI GCNGC 3 cut(s) 703, 765, 1483
FspBI CTAG 1 cut(s) 720
GlaI GCGC 1 cut(s) 1253
GluI GCNGC 3 cut(s) 703, 765, 1483
GsuI CTGGAG 1 cut(s) 1592
HaeII RGCGCY 1 cut(s) 1255
HaeIII GGCC 3 cut(s) 727, 1531, 1682
HapII CCGG 1 cut(s) 1686
HgaI GACGC 1 cut(s) 1424
HhaI GCGC 1 cut(s) 1254
Hin1I GRCGYC 1 cut(s) 1252
Hin1II CATG 8 cut(s) 136, 173, 193, 553, 559, 662, 1265, 1669
Hin6I GCGC 1 cut(s) 1252
HinP1I GCGC 1 cut(s) 1252
HincII GTYRAC 1 cut(s) 79
HindII GTYRAC 1 cut(s) 79
HindIII AAGCTT 2 cut(s) 452, 1235
HinfI GANTC 7 cut(s) 100, 332, 494, 752, 1132, 1204, 1559
HpaI GTTAAC 1 cut(s) 79
HpaII CCGG 1 cut(s) 1686
HphI GGTGA 4 cut(s) 350, 809, 1046, 1139
Hpy166II GTNNAC 6 cut(s) 79, 544, 943, 1153, 1348, 1468
Hpy188I TCNGA 9 cut(s) 448, 459, 588, 595, 666, 742, 1137, 1414, 1564
Hpy8I GTNNAC 6 cut(s) 79, 544, 943, 1153, 1348, 1468
Hpy99I CGWCG 1 cut(s) 1212
HpyAV CCTTC 6 cut(s) 159, 619, 850, 885, 970, 1099
HpyCH4IV ACGT 8 cut(s) 90, 110, 567, 571, 839, 1088, 1307, 1509
HpyCH4V TGCA 6 cut(s) 634, 675, 767, 1485, 1554, 1658
HpyF3I CTNAG 5 cut(s) 105, 592, 708, 808, 1229
HpySE526I ACGT 8 cut(s) 90, 110, 567, 571, 839, 1088, 1307, 1509
Hsp92I GRCGYC 1 cut(s) 1252
Hsp92II CATG 8 cut(s) 136, 173, 193, 553, 559, 662, 1265, 1669
HspAI GCGC 1 cut(s) 1252
KasI GGCGCC 1 cut(s) 1251
KspAI GTTAAC 1 cut(s) 79
Kzo9I GATC 8 cut(s) 49, 247, 392, 428, 742, 1323, 1564, 1688
LmnI GCTCC 4 cut(s) 38, 317, 804, 924
Lsp1109I GCAGC 3 cut(s) 689, 751, 1469
LweI GCATC 3 cut(s) 476, 1010, 1667
MaeI CTAG 1 cut(s) 720
MaeII ACGT 8 cut(s) 90, 110, 567, 571, 839, 1088, 1307, 1509
MaeIII GTNAC 5 cut(s) 91, 121, 128, 201, 1457
MalI GATC 8 cut(s) 51, 249, 394, 430, 744, 1325, 1566, 1690
MboI GATC 8 cut(s) 49, 247, 392, 428, 742, 1323, 1564, 1688
MboII GAAGA 2 cut(s) 317, 1049
MflI RGATCY 2 cut(s) 392, 1323
MhlI GDGCHC 3 cut(s) 211, 809, 929
MlsI TGGCCA 1 cut(s) 1531
MluNI TGGCCA 1 cut(s) 1531
Mly113I GGCGCC 1 cut(s) 1252
MlyI GAGTC 1 cut(s) 503
MmeI TCCRAC 2 cut(s) 16, 1686
Mox20I TGGCCA 1 cut(s) 1531
Mph1103I ATGCAT 1 cut(s) 1660
MroXI GAANNNNTTC 1 cut(s) 1237
MscI TGGCCA 1 cut(s) 1531
MseI TTAA 7 cut(s) 78, 513, 621, 1170, 1191, 1334, 1476
MslI CAYNNNNRTG 2 cut(s) 554, 1413
Msp20I TGGCCA 1 cut(s) 1531
MspA1I CMGCKG 2 cut(s) 1297, 1622
MspI CCGG 1 cut(s) 1686
NarI GGCGCC 1 cut(s) 1252
NdeI CATATG 1 cut(s) 322
NdeII GATC 8 cut(s) 49, 247, 392, 428, 742, 1323, 1564, 1688
NlaIII CATG 8 cut(s) 136, 173, 193, 553, 559, 662, 1265, 1669
NlaIV GGNNCC 3 cut(s) 210, 1253, 1325
NmuCI GTSAC 1 cut(s) 201
NsiI ATGCAT 1 cut(s) 1660
PagI TCATGA 2 cut(s) 549, 1261
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PdmI GAANNNNTTC 1 cut(s) 1237
PfeI GAWTC 6 cut(s) 100, 332, 752, 1132, 1204, 1559
Pfl23II CGTACG 1 cut(s) 568
PflMI CCANNNNNTGG 1 cut(s) 335
PkrI GCNGC 3 cut(s) 704, 766, 1484
PleI GAGTC 1 cut(s) 502
PluTI GGCGCC 1 cut(s) 1255
PpsI GAGTC 1 cut(s) 502
Ppu21I YACGTR 2 cut(s) 91, 572
PsiI TTATAA 1 cut(s) 696
Psp124BI GAGCTC 2 cut(s) 809, 929
Psp1406I AACGTT 2 cut(s) 839, 1509
PspLI CGTACG 1 cut(s) 568
PspN4I GGNNCC 3 cut(s) 210, 1253, 1325
PspPI GGNCC 1 cut(s) 726
PstI CTGCAG 1 cut(s) 769
PstNI CAGNNNCTG 1 cut(s) 335
PsuI RGATCY 2 cut(s) 392, 1323
PvuII CAGCTG 2 cut(s) 1297, 1622
RsaI GTAC 2 cut(s) 570, 869
RsaNI GTAC 2 cut(s) 569, 868
RseI CAYNNNNRTG 2 cut(s) 554, 1413
SacI GAGCTC 2 cut(s) 809, 929
SaqAI TTAA 7 cut(s) 78, 513, 621, 1170, 1191, 1334, 1476
SatI GCNGC 3 cut(s) 703, 765, 1483
Sau3AI GATC 8 cut(s) 49, 247, 392, 428, 742, 1323, 1564, 1688
Sau96I GGNCC 1 cut(s) 726
ScaI AGTACT 1 cut(s) 869
SchI GAGTC 1 cut(s) 503
SduI GDGCHC 3 cut(s) 211, 809, 929
SfaNI GCATC 3 cut(s) 476, 1010, 1667
SfcI CTRYAG 1 cut(s) 765
SfoI GGCGCC 1 cut(s) 1253
SmiMI CAYNNNNRTG 2 cut(s) 554, 1413
SmlI CTYRAG 4 cut(s) 158, 184, 962, 1499
SmoI CTYRAG 4 cut(s) 158, 184, 962, 1499
SnaBI TACGTA 1 cut(s) 91
SspDI GGCGCC 1 cut(s) 1251
SspI AATATT 1 cut(s) 1541
SspMI CTAG 1 cut(s) 720
SstI GAGCTC 2 cut(s) 809, 929
StyI CCWWGG 1 cut(s) 243
TaiI ACGT 8 cut(s) 93, 113, 570, 574, 842, 1091, 1310, 1512
TaqI TCGA 1 cut(s) 116
TatI WGTACW 1 cut(s) 867
TfiI GAWTC 6 cut(s) 100, 332, 752, 1132, 1204, 1559
Tru1I TTAA 7 cut(s) 78, 513, 621, 1170, 1191, 1334, 1476
Tru9I TTAA 7 cut(s) 78, 513, 621, 1170, 1191, 1334, 1476
TscAI CASTG 6 cut(s) 879, 919, 1350, 1470, 1539, 1561
TseFI GTSAC 1 cut(s) 201
TseI GCWGC 3 cut(s) 702, 764, 1482
Tsp45I GTSAC 1 cut(s) 201
TspDTI ATGAA 7 cut(s) 149, 189, 566, 642, 837, 1086, 1179
TspGWI ACGGA 1 cut(s) 453
TspRI CASTG 6 cut(s) 879, 919, 1350, 1470, 1539, 1561
Van91I CCANNNNNTGG 1 cut(s) 335
XapI RAATTY 9 cut(s) 222, 400, 649, 667, 790, 1166, 1330, 1363, 1627
XmnI GAANNNNTTC 1 cut(s) 1237
XspI CTAG 1 cut(s) 720
ZrmI AGTACT 1 cut(s) 869
Zsp2I ATGCAT 1 cut(s) 1660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.