Rh6DG117200

AAA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000279
Physical Location & Seq
Forward (+)
15600515 .. 15607384
6870 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG117200.1

Sequence Viewer

Length: 1584 bp
ATGAACAAGGAGAGTGGTAAGCCGAAAAAAAAAATTGGAGGTAGGAGCTTGATTGATTTGGTCTTCTCTTGGTCTATTACAGATGTTCTCAATAAAGATCATTACAAAACCCAGGTAACTAAGATTCCTGAGACGTTCTCGACCGTAACGAGTTACATGAAAGCATTTGTTCCTTCACTTCTTGAGGAAATACATGATGAATTACGCTCAAGCATGATGTCCCTGGCGCAGGCACGAACTTGTGAAATTCTGACAGTTGAAACTTCCAAGGATCATAAACCTCCCAAAGACTTGTTTTACCAAATTACATGTGCAGAAGATTACGTAGGAGCATACGAGCCAGTTGTTGGTGATATCATTGCCTTGACCGATGTGAGACCAAAATCCATTGATGATTTGAATAGATCCAGAAATTCTTATCTTATTGTTTATGTTATTGGATCACAACACGGAAGTTCTGATAAGCTTCCGATACTCGCATCAAAGTCTATCAATAAAGGAGAGTCAGGAAACAAAAAGATTAATAGTAAGAGTGATACACTTTTTGCTGTTTACCTCATGAACATGACAACAAATGTACGTGTATGGAAAGCTCTGAACTCAGAATTAGGCTCAAACACAAATCTGTTTAAGAATATTCTGCAAGTGCAACCACCAAATTCATCACATCGTCGGAATTCTTGCCAAATTTGTTTTTCCAATGATAAAGGCTGCCCTGAGCTTTTTACTAGATGGCCCACAATGTGTTCTGATCTAAATAATTCCCAAGAGGCTGCAGTTTTGGACTGTATCAGTTTGAATTCTGGTGATAGGAGCTCAGCAAGTGATGAAGAAAATGATATTCTAACGTTTGAGCAGTTTGTGAAGGAGAGACAGTACTCACTGTATTTGAAAAAGAGAAGGGAAAAATACAATAAAGACAGTGATAATAGGAGCTCATCAAGTGATGATCACAATGGTTTTTTGACACTTAAGGAGTTTGTGAAGGAGAAACAGTATTCACAGTCTTTGAAAAAGGGAAAGGAAAGATGCGACAATGACGGTGAAGATACTGATAACACAAACTCATCAAGTGATGATGAAACTGATGTTTTGACGTTTGAGGAGTTTGTGAAGGAGAAACAGAATTACATTGGTGAGAATCTGAAGCTGTGTATGGGGGTTGGCATTGCTAGTGAAGGGTTTACTTTGCCAATGAATTTTACAACTCCATCGCAAAAATTAAAGACCCCAAGATTCGTCGGGAAGGACGATGTAGTTCCAATTAGATGGCTGGTGGGATATTCAAGCAGTTACAGTGAATCTGATCCTCTGGAGTTCCTTTCAACACCATTATCTTGTCTCACTCTGAGGGACGAGCCAGCTGAAAATTCAACTGCATCTTATATGAGAAATAATGCATCCAACATGAGTGGAAAGGAGGCCACCGGATCAACACCAAGTAAGCTCATGAGCAACGTGATTCCTCTTATGCCGATTATGTTGCCTAGTGCAGCTCTGAAACCTCGACAGAATGTGCTTTACATCATCAAGAACAATCCACTCGATGCTCAAAAGTCAAAACCTCTGTGCCATCATGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12

Protein Analysis

527

Amino Acids

59.18

Weight (kDa)

6.5

Isoelectric Point (pI)

47.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF6469 PF20073 111 - 200 1.8e-10 Domain of unknown function (DUF6469)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65810 AT1G65810 AT1G65810 AT4G05540 AT5G37140 AT5G37150 AT5G37160 AT5G37165 AT5G52090
fragaria_vesca FvH4_1g27541 FvH4_1g27542 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_2g08960 FvH4_3g00170 FvH4_3g00170 FvH4_3g00170 FvH4_5g05930 FvH4_5g05930
malus_domestica MD08G1077700.v1.1 MD08G1077900.v1.1 MD08G1078000.v1.1 MD08G1078100.v1.1 MD08G1078300.v1.1 MD09G1057800.v1.1 MD09G1281400.v1.1 MD11G1222900.v1.1 MD14G1146400.v1.1
prunus_persica Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G201900_v2.0.a1 Prupe.1G202100_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.1G202500_v2.0.a1 Prupe.3G013100_v2.0.a1
pyrus_communis pycom09g18900 pycom09g18910 pycom13g26720 pycom13g26730 pycom13g26760 pycom13g26770
rosa_chinensis RchiOBHm_Chr3g0488001 RchiOBHm_Chr3g0488011 RchiOBHm_Chr3g0488031 RchiOBHm_Chr3g0488061 RchiOBHm_Chr3g0488111 RchiOBHm_Chr3g0488201 RchiOBHm_Chr3g0488211 RchiOBHm_Chr3g0488221 RchiOBHm_Chr3g0488321 RchiOBHm_Chr3g0488431 RchiOBHm_Chr6g0264601 RchiOBHm_Chr6g0264641
rosa_laevigata RLG00000014240 RLG00000014241 RLG00000022910 RLG00000022949 RLG00000030376
rosa_multiflora Rmu_co8075388.1_g000001 Rmu_co8424869.1_g000001 Rmu_co8427783.1_g000001 Rmu_sc0000546.1_g000002 Rmu_sc0000546.1_g000015 Rmu_sc0011052.1_g000014 Rmu_sc0017772.1_g000004
rosa_roxburghii Rroxscaffold_175G00431980 Rroxscaffold_175G00431990 Rroxscaffold_1G00034600 Rroxscaffold_6G00394230 Rroxscaffold_6G00394270 Rroxscaffold_6G00394280 Rroxscaffold_6G00394350 Rroxscaffold_7G00203240 Rroxscaffold_7G00203270 Rroxscaffold_7G00203280 Rroxscaffold_7G00203300 Rroxscaffold_7G00205740
rosa_rugosa Rorug03G0238000 Rorug03G0238100 Rorug03G0238100 Rorug03G0238500 Rorug05G0155400 Rorug05G0356000 Rorug05G0463000 Rorug06G0015200 Rorug06G0015300 Rorug06G0015400 Rorug06G0015500 Rorug06G0015500
rosa_samantha Rh1DG088100 Rh2AG244800 Rh2BG187500 Rh2CG247300 Rh3BG322700 Rh3BG322800 Rh3BG323100 Rh3BG323900 Rh3BG324000 Rh3BG324300 Rh3CG321300 Rh3CG321400 Rh3CG321500 Rh3DG319400 Rh3DG319900 Rh3DG320100 Rh3DG320200 Rh6AG133700 Rh6AG133800 Rh6AG133900 Rh6CG129300 Rh6CG129800 Rh6CG130200 Rh6DG116500 Rh6DG117200 Rh7DG378000
rosa_wichuraiana Rw2G014710 Rw3G025340 Rw3G025350 Rw3G025360 Rw5G020630 Rw6G011590 Rw6G011600 Rw7G041380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 347
AclI AACGTT 1 cut(s) 848
AclWI GGATC 5 cut(s) 279, 399, 448, 1301, 1438
AcsI RAATTY 8 cut(s) 246, 412, 658, 676, 687, 799, 1198, 1369
AcuI CTGAAG 1 cut(s) 1166
AdeI CACNNNGTG 1 cut(s) 744
AfaI GTAC 2 cut(s) 579, 878
AfiI CCNNNNNNNGG 2 cut(s) 229, 347
AflII CTTAAG 1 cut(s) 971
AflIII ACRYGT 2 cut(s) 308, 580
AgsI TTSAA 8 cut(s) 260, 400, 799, 892, 1012, 1287, 1326, 1374
AjnI CCWGG 2 cut(s) 111, 222
Alw21I GWGCWC 2 cut(s) 818, 938
Alw26I GTCTC 4 cut(s) 125, 370, 865, 1346
AlwI GGATC 5 cut(s) 279, 399, 448, 1301, 1438
AoxI GGCC 2 cut(s) 734, 1422
ApeKI GCWGC 3 cut(s) 711, 773, 1493
ApoI RAATTY 8 cut(s) 246, 412, 658, 676, 687, 799, 1198, 1369
AseI ATTAAT 1 cut(s) 522
AspLEI GCGC 1 cut(s) 229
AspS9I GGNCC 1 cut(s) 735
AsuHPI GGTGA 4 cut(s) 362, 818, 1055, 1148
BanII GRGCYC 2 cut(s) 818, 938
BbsI GAAGAC 1 cut(s) 55
Bbv12I GWGCWC 2 cut(s) 818, 938
BbvI GCAGC 3 cut(s) 698, 760, 1505
BccI CCATC 4 cut(s) 726, 1219, 1263, 1581
BcgI CGANNNNNNTGC 2 cut(s) 1465, 1499
BciT130I CCWGG 2 cut(s) 113, 224
BclI TGATCA 1 cut(s) 949
BcoDI GTCTC 4 cut(s) 125, 370, 865, 1346
BfaI CTAG 3 cut(s) 729, 1173, 1488
BfmI CTRYAG 1 cut(s) 774
BfrI CTTAAG 1 cut(s) 971
BisI GCNGC 3 cut(s) 712, 774, 1494
BlpI GCTNAGC 1 cut(s) 817
BlsI GCNGC 3 cut(s) 713, 775, 1495
BmcAI AGTACT 1 cut(s) 878
Bme1390I CCNGG 2 cut(s) 113, 224
BmgT120I GGNCC 1 cut(s) 735
BmrFI CCNGG 2 cut(s) 113, 224
BmsI GCATC 5 cut(s) 488, 1019, 1388, 1409, 1537
BpiI GAAGAC 1 cut(s) 55
BplI GAGNNNNNCTC 2 cut(s) 122, 154
BpmI CTGGAG 1 cut(s) 1334
Bpu10I CCTNAGC 1 cut(s) 717
Bpu1102I GCTNAGC 1 cut(s) 817
BpuEI CTTGAG 2 cut(s) 193, 203
BsaAI YACGTR 2 cut(s) 325, 581
BsaI GGTCTC 1 cut(s) 370
BsaJI CCNNGG 3 cut(s) 111, 222, 267
BsaWI WCCGGW 1 cut(s) 1427
BsaXI ACNNNNNCTCC 4 cut(s) 860, 890, 980, 1010
Bsc4I CCNNNNNNNGG 2 cut(s) 229, 347
Bse1I ACTGG 1 cut(s) 341
Bse3DI GCAATG 2 cut(s) 357, 1167
BseBI CCWGG 2 cut(s) 113, 224
BseDI CCNNGG 3 cut(s) 111, 222, 267
BseGI GGATG 1 cut(s) 1400
BseLI CCNNNNNNNGG 2 cut(s) 229, 347
BseMI GCAATG 2 cut(s) 357, 1167
BseMII CTCAG 5 cut(s) 120, 615, 708, 831, 1340
BseNI ACTGG 1 cut(s) 341
BseRI GAGGAG 1 cut(s) 1118
BseXI GCAGC 3 cut(s) 698, 760, 1505
BsgI GTGCAG 2 cut(s) 333, 1512
Bsh1285I CGRYCG 1 cut(s) 144
BshFI GGCC 2 cut(s) 736, 1424
BsiEI CGRYCG 1 cut(s) 144
BsiHKAI GWGCWC 2 cut(s) 818, 938
BsiSI CCGG 1 cut(s) 1428
BslFI GGGAC 2 cut(s) 205, 1367
BslI CCNNNNNNNGG 2 cut(s) 229, 347
BsmAI GTCTC 4 cut(s) 125, 370, 865, 1346
BsmBI CGTCTC 1 cut(s) 125
BsmFI GGGAC 2 cut(s) 205, 1367
BsnI GGCC 2 cut(s) 736, 1424
Bso31I GGTCTC 1 cut(s) 370
Bsp1286I GDGCHC 2 cut(s) 818, 938
Bsp143I GATC 8 cut(s) 97, 271, 404, 440, 751, 949, 1306, 1430
Bsp1720I GCTNAGC 1 cut(s) 817
BspANI GGCC 2 cut(s) 736, 1424
BspCNI CTCAG 5 cut(s) 121, 614, 709, 830, 1341
BspHI TCATGA 2 cut(s) 558, 1449
BspMAI CTGCAG 1 cut(s) 778
BspPI GGATC 5 cut(s) 279, 399, 448, 1301, 1438
BspTI CTTAAG 1 cut(s) 971
BspTNI GGTCTC 1 cut(s) 370
BsrDI GCAATG 2 cut(s) 357, 1167
BsrI ACTGG 1 cut(s) 341
BssECI CCNNGG 3 cut(s) 111, 222, 267
BssMI GATC 8 cut(s) 97, 271, 404, 440, 751, 949, 1306, 1430
BssT1I CCWWGG 1 cut(s) 267
Bst2UI CCWGG 2 cut(s) 113, 224
BstAFI CTTAAG 1 cut(s) 971
BstBAI YACGTR 2 cut(s) 325, 581
BstC8I GCNNGC 2 cut(s) 231, 1362
BstDEI CTNAG 6 cut(s) 120, 129, 601, 717, 817, 1349
BstENI CCTNNNNNAGG 1 cut(s) 227
BstF5I GGATG 1 cut(s) 1400
BstHHI GCGC 1 cut(s) 229
BstKTI GATC 8 cut(s) 100, 274, 407, 443, 754, 952, 1309, 1433
BstMAI GTCTC 4 cut(s) 125, 370, 865, 1346
BstMBI GATC 8 cut(s) 97, 271, 404, 440, 751, 949, 1306, 1430
BstMCI CGRYCG 1 cut(s) 144
BstNI CCWGG 2 cut(s) 113, 224
BstNSI RCATGY 1 cut(s) 312
BstSCI CCNGG 2 cut(s) 111, 222
BstSFI CTRYAG 1 cut(s) 774
BstSNI TACGTA 1 cut(s) 325
BstV1I GCAGC 3 cut(s) 698, 760, 1505
BstV2I GAAGAC 1 cut(s) 55
BstX2I RGATCY 1 cut(s) 404
BstXI CCANNNNNNTGG 1 cut(s) 1269
BstYI RGATCY 1 cut(s) 404
BsuRI GGCC 2 cut(s) 736, 1424
BtgZI GCGATG 1 cut(s) 1197
BtsCI GGATG 1 cut(s) 1400
BtsIMutI CAGTG 3 cut(s) 881, 928, 1303
Cac8I GCNNGC 2 cut(s) 231, 1362
CciI TCATGA 2 cut(s) 558, 1449
CfoI GCGC 1 cut(s) 229
Cfr13I GGNCC 1 cut(s) 735
Csp6I GTAC 2 cut(s) 578, 877
CspCI CAANNNNNGTGG 3 cut(s) 30, 1393, 1428
CviAII CATG 9 cut(s) 157, 194, 214, 309, 559, 565, 1408, 1450, 1577
CviQI GTAC 2 cut(s) 578, 877
DdeI CTNAG 6 cut(s) 120, 129, 601, 717, 817, 1349
DpnI GATC 8 cut(s) 99, 273, 406, 442, 753, 951, 1308, 1432
DpnII GATC 8 cut(s) 97, 271, 404, 440, 751, 949, 1306, 1430
DraIII CACNNNGTG 1 cut(s) 744
Ecl136II GAGCTC 2 cut(s) 816, 936
Eco105I TACGTA 1 cut(s) 325
Eco130I CCWWGG 1 cut(s) 267
Eco24I GRGCYC 2 cut(s) 818, 938
Eco31I GGTCTC 1 cut(s) 370
Eco32I GATATC 1 cut(s) 355
Eco53kI GAGCTC 2 cut(s) 816, 936
Eco57I CTGAAG 1 cut(s) 1166
EcoICRI GAGCTC 2 cut(s) 816, 936
EcoNI CCTNNNNNAGG 1 cut(s) 227
EcoRI GAATTC 2 cut(s) 676, 799
EcoRII CCWGG 2 cut(s) 111, 222
EcoRV GATATC 1 cut(s) 355
EcoT14I CCWWGG 1 cut(s) 267
EcoT22I ATGCAT 1 cut(s) 1402
EcoT38I GRGCYC 2 cut(s) 818, 938
ErhI CCWWGG 1 cut(s) 267
Esp3I CGTCTC 1 cut(s) 125
FaeI CATG 9 cut(s) 160, 197, 217, 312, 562, 568, 1411, 1453, 1580
FaqI GGGAC 2 cut(s) 205, 1367
FatI CATG 9 cut(s) 156, 193, 213, 308, 558, 564, 1407, 1449, 1576
FbaI TGATCA 1 cut(s) 949
Fnu4HI GCNGC 3 cut(s) 712, 774, 1494
FokI GGATG 1 cut(s) 1387
FriOI GRGCYC 2 cut(s) 818, 938
Fsp4HI GCNGC 3 cut(s) 712, 774, 1494
FspBI CTAG 3 cut(s) 729, 1173, 1488
GlaI GCGC 1 cut(s) 228
GluI GCNGC 3 cut(s) 712, 774, 1494
GsuI CTGGAG 1 cut(s) 1334
HaeIII GGCC 2 cut(s) 736, 1424
HapII CCGG 1 cut(s) 1428
HhaI GCGC 1 cut(s) 229
Hin1II CATG 9 cut(s) 160, 197, 217, 312, 562, 568, 1411, 1453, 1580
Hin6I GCGC 1 cut(s) 227
HinP1I GCGC 1 cut(s) 227
HindIII AAGCTT 1 cut(s) 464
HinfI GANTC 6 cut(s) 124, 503, 1141, 1236, 1301, 1462
HpaII CCGG 1 cut(s) 1428
HphI GGTGA 4 cut(s) 362, 818, 1055, 1148
Hpy166II GTNNAC 2 cut(s) 553, 1185
Hpy8I GTNNAC 2 cut(s) 553, 1185
Hpy99I CGWCG 2 cut(s) 675, 1244
HpyAV CCTTC 7 cut(s) 183, 859, 894, 979, 1108, 1172, 1240
HpyCH4IV ACGT 6 cut(s) 134, 324, 580, 848, 1097, 1458
HpyCH4V TGCA 7 cut(s) 314, 643, 649, 776, 1379, 1400, 1493
HpyF3I CTNAG 6 cut(s) 120, 129, 601, 717, 817, 1349
HpySE526I ACGT 6 cut(s) 134, 324, 580, 848, 1097, 1458
Hsp92II CATG 9 cut(s) 160, 197, 217, 312, 562, 568, 1411, 1453, 1580
HspAI GCGC 1 cut(s) 227
Ksp22I TGATCA 1 cut(s) 949
Kzo9I GATC 8 cut(s) 97, 271, 404, 440, 751, 949, 1306, 1430
LmnI GCTCC 4 cut(s) 45, 329, 813, 933
Lsp1109I GCAGC 3 cut(s) 698, 760, 1505
LweI GCATC 5 cut(s) 488, 1019, 1388, 1409, 1537
MaeI CTAG 3 cut(s) 729, 1173, 1488
MaeII ACGT 6 cut(s) 134, 324, 580, 848, 1097, 1458
MaeIII GTNAC 4 cut(s) 115, 145, 152, 1292
MalI GATC 8 cut(s) 99, 273, 406, 442, 753, 951, 1308, 1432
MboI GATC 8 cut(s) 97, 271, 404, 440, 751, 949, 1306, 1430
MboII GAAGA 4 cut(s) 55, 329, 842, 1058
MflI RGATCY 1 cut(s) 404
MhlI GDGCHC 2 cut(s) 818, 938
MlyI GAGTC 1 cut(s) 512
MmeI TCCRAC 2 cut(s) 653, 1428
Mph1103I ATGCAT 1 cut(s) 1402
MseI TTAA 4 cut(s) 522, 630, 972, 1223
MslI CAYNNNNRTG 1 cut(s) 563
MspA1I CMGCKG 1 cut(s) 1364
MspCI CTTAAG 1 cut(s) 971
MspI CCGG 1 cut(s) 1428
MspR9I CCNGG 2 cut(s) 113, 224
MvaI CCWGG 2 cut(s) 113, 224
NdeII GATC 8 cut(s) 97, 271, 404, 440, 751, 949, 1306, 1430
NlaIII CATG 9 cut(s) 160, 197, 217, 312, 562, 568, 1411, 1453, 1580
NsiI ATGCAT 1 cut(s) 1402
NspI RCATGY 1 cut(s) 312
PagI TCATGA 2 cut(s) 558, 1449
PciI ACATGT 1 cut(s) 308
PcsI WCGNNNNNNNCGW 2 cut(s) 146, 1248
PfeI GAWTC 5 cut(s) 124, 1141, 1236, 1301, 1462
PflMI CCANNNNNTGG 1 cut(s) 347
PkrI GCNGC 3 cut(s) 713, 775, 1495
PleI GAGTC 1 cut(s) 511
PpsI GAGTC 1 cut(s) 511
Ppu21I YACGTR 2 cut(s) 325, 581
PscI ACATGT 1 cut(s) 308
PshBI ATTAAT 1 cut(s) 522
Psp124BI GAGCTC 2 cut(s) 818, 938
Psp1406I AACGTT 1 cut(s) 848
Psp6I CCWGG 2 cut(s) 111, 222
PspGI CCWGG 2 cut(s) 111, 222
PspPI GGNCC 1 cut(s) 735
PstI CTGCAG 1 cut(s) 778
PsuI RGATCY 1 cut(s) 404
PvuII CAGCTG 1 cut(s) 1364
RsaI GTAC 2 cut(s) 579, 878
RsaNI GTAC 2 cut(s) 578, 877
RseI CAYNNNNRTG 1 cut(s) 563
SacI GAGCTC 2 cut(s) 818, 938
SaqAI TTAA 4 cut(s) 522, 630, 972, 1223
SatI GCNGC 3 cut(s) 712, 774, 1494
Sau3AI GATC 8 cut(s) 97, 271, 404, 440, 751, 949, 1306, 1430
Sau96I GGNCC 1 cut(s) 735
ScaI AGTACT 1 cut(s) 878
SchI GAGTC 1 cut(s) 512
ScrFI CCNGG 2 cut(s) 113, 224
SduI GDGCHC 2 cut(s) 818, 938
SfaNI GCATC 5 cut(s) 488, 1019, 1388, 1409, 1537
SfcI CTRYAG 1 cut(s) 774
SmiMI CAYNNNNRTG 1 cut(s) 563
SmlI CTYRAG 3 cut(s) 182, 208, 971
SmoI CTYRAG 3 cut(s) 182, 208, 971
SnaBI TACGTA 1 cut(s) 325
SspI AATATT 1 cut(s) 637
SspMI CTAG 3 cut(s) 729, 1173, 1488
SstI GAGCTC 2 cut(s) 818, 938
StyD4I CCNGG 2 cut(s) 111, 222
StyI CCWWGG 1 cut(s) 267
TaiI ACGT 6 cut(s) 137, 327, 583, 851, 1100, 1461
TaqI TCGA 3 cut(s) 140, 1507, 1545
TaqII GACCGA 1 cut(s) 383
TatI WGTACW 1 cut(s) 876
TfiI GAWTC 5 cut(s) 124, 1141, 1236, 1301, 1462
Tru1I TTAA 4 cut(s) 522, 630, 972, 1223
Tru9I TTAA 4 cut(s) 522, 630, 972, 1223
TscAI CASTG 3 cut(s) 888, 928, 1303
TseI GCWGC 3 cut(s) 711, 773, 1493
TspDTI ATGAA 8 cut(s) 17, 173, 213, 575, 651, 843, 1095, 1211
TspGWI ACGGA 1 cut(s) 465
TspRI CASTG 3 cut(s) 888, 928, 1303
Van91I CCANNNNNTGG 1 cut(s) 347
Vha464I CTTAAG 1 cut(s) 971
VspI ATTAAT 1 cut(s) 522
XagI CCTNNNNNAGG 1 cut(s) 227
XapI RAATTY 8 cut(s) 246, 412, 658, 676, 687, 799, 1198, 1369
XceI RCATGY 1 cut(s) 312
XspI CTAG 3 cut(s) 729, 1173, 1488
ZrmI AGTACT 1 cut(s) 878
Zsp2I ATGCAT 1 cut(s) 1402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.