AT3G24780

conserved protein UCP015417, vWA (InterPro IPR011205), von Willebrand factor, type A (InterPro IPR002035)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000255
Physical Location & Seq
Forward (+)
9049090 .. 9051752
2663 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G24780.1

Sequence Viewer

Length: 2148 bp
ATGGCTTCTCAGTTCCCTGGTCCATCCGAGATCCAAGACTCCAACGCTCCCCTCACATCTTCTGGTCCCACCAATCCAGTCAATACTTCACCTCCGATGGGACAGACCGAGGAAAGACCCCACACGTACCTCGCCGCTCTCCTCAAGAACATCAACACTTGTCGTCCCAGCGTCCCAAAGGTCTCAAACATCAAGAAATCAACTAAAGTCAACGTCAATCCTGTTAGACCTGTTAGACCGGTTCGACCTATTAGACCGGTTAGACCTGTTAGACCGGTTAGACCTGTTAGACGGCGAAGAGTAGATTTAAACAAATCTTCACCTGCGATGGGCTACACTGAGAATAGATCCGCCACCTACCTCTCCTCAGGTAACCCCTGCCTCGACTTCTTCTTTCACATTGTTCCTTCCACGCCCAAGAAATCTCTGGAGCAGCGGCTAGAGGAGGCTTGGGACCATGATTCTTTAACCACTCTCAAGCTTATCTGTAACCTTCGTGGAGTCCGTGGCACTGGAAAATCTGACAAGGAAGGGTTTTACACGGCGGCGTTGTGGCTCCATGGTCGCCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTCTCCAAATTTGGCTATTTTAAAGATTTTCCGGAGATTCTTTACCGGATTCTACAAGGACCTGAAATCCGCAGTATACAGAAAACGCAAAGGTACGATACAATAGCCGCAGCATCTCTACGTAGAAGATCCCGTTTCTCTAGAGGTGGTCGTGGTTTTGGTGGTGGTCGTAGTAGGGGTCGTCATTTTTTAAAAAGGTCGGCAGCCACGAGGGAGCTAAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGCCAGAGCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCAATGGCGAAGGCTGCATCTACAAAGTATTCTAACGATCCAAACTATAGGTTTCTCCACGAACGTGTCTCTGAACTATTCGCAAATCAACTAAAGAGAGACCTTGAGTTTTTGACATCCGGCCAACCAAACAAAATCTCTCTAGCGGCTAAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTTATCTGCGAGAGCATAGCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAGATGCTCACTATGCGTACAGAGTTCGTGACCGGCTAAGGAAACAAGTCCTTGTTCCTCTCCGGAAGACTCTGCAACTCCCTGAAGTATACATGGGAGCTAGAGCTTGGCAATCTCTCCCTTATAACCGTGTTGCATCAGTGGCGATGAAGTCATACAAGGAGGTTTTCTTGTATCGTGACGAAAAGAGGTTTCAGCAATATCTTAACGATGCCAAGACGGGGAAAACGAAGATAGCCGCCGGTGCTGTGTTACCTCACGAGATAATCAGAGAGTTAAACGGCGGAGACGGTGGCAAAGTCGCTGAGCTGCAATGGAAACGAATGGTTGACGACCTTAAAGAGAAAGGTTCTTTGACCAACTGCATGGCTATATGTGACGTTTCGGGATCTATGAATGGTGAGCCAATGGAGGTTTCAGTCGCCCTTGGATTGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATTCAGACAAAGTCCTGAACTGCATTTGGTGAAAGGAGACGATTTGAGATCAAAAACAGAGTTTGTGGAGAGCATGCAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTAAAGTGGCCGTGGAAAGCAAGCTTAAGCCGCAAGACATGATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGTTTGATGAAGCGTCGACTTCGACTTCTTCGTTTAATAAATGGAGAAGTTCACCTCCGACTCCGAGTAATAGATGGGATACGCTATCATATTCAGAGGATGATGAAGATGAAGAGAATGATGCTTGGCAAACGGATTACAAGGTGATTGTGAGAAAGTATAGAGAGAAAGGGTACGGAGAGGCTGTGCCGGAGATTGTGTTTTGGAATCTGAGGGATTCGAGGTCAACGCCTGTGCTTGGAAACAAGAAAGGAGTGGCTTTGGTAAGTGGGTTTTCCAAAAAATGTTCTTGGATTACGATGGAGAGATTGATCCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

715

Amino Acids

81.39

Weight (kDa)

9.7

Isoelectric Point (pI)

55.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 113 - 503 1.1e-140 Domain of unknown function (DUF2828)
DUF7788 PF25043 505 - 704 1.7e-73 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1278, 1631
AarI CACCTGC 1 cut(s) 331
Acc36I ACCTGC 1 cut(s) 331
AccBSI CCGCTC 1 cut(s) 137
AccI GTMKAC 3 cut(s) 676, 1242, 1844
AccII CGCG 1 cut(s) 833
AccIII TCCGGA 2 cut(s) 631, 1215
AclWI GGATC 6 cut(s) 25, 342, 723, 926, 1549, 2134
AcoI YGGCCR 2 cut(s) 1015, 1764
AcsI RAATTY 1 cut(s) 608
AcuI CTGAAG 1 cut(s) 1257
AfaI GTAC 4 cut(s) 128, 695, 1172, 2003
AfiI CCNNNNNNNGG 5 cut(s) 98, 329, 1374, 1619, 2066
AflII CTTAAG 1 cut(s) 1781
AflIII ACRYGT 2 cut(s) 123, 958
AgeI ACCGGT 3 cut(s) 238, 256, 274
AgsI TTSAA 2 cut(s) 874, 897
AjnI CCWGG 1 cut(s) 16
AjuI GAANNNNNNNTTGG 2 cut(s) 1552, 1584
AleI CACNNNNGTG 1 cut(s) 957
Alw26I GTCTC 7 cut(s) 187, 603, 967, 987, 1434, 1597, 1665
AlwI GGATC 6 cut(s) 25, 342, 723, 926, 1549, 2134
Ama87I CYCGRG 1 cut(s) 593
Aor13HI TCCGGA 2 cut(s) 631, 1215
AoxI GGCC 2 cut(s) 1015, 1764
ApeKI GCWGC 5 cut(s) 433, 710, 803, 908, 1462
ApoI RAATTY 1 cut(s) 608
ArsI GACNNNNNNTTYG 2 cut(s) 1814, 1846
AsiGI ACCGGT 3 cut(s) 238, 256, 274
AspLEI GCGC 1 cut(s) 879
AspS9I GGNCC 4 cut(s) 20, 65, 454, 659
AsuC2I CCSGG 1 cut(s) 1136
AsuHPI GGTGA 6 cut(s) 81, 312, 1565, 1675, 1872, 1984
AvaI CYCGRG 1 cut(s) 593
AvaII GGWCC 4 cut(s) 20, 65, 454, 659
AxyI CCTNAGG 1 cut(s) 367
BauI CACGAG 2 cut(s) 808, 1412
BbsI GAAGAC 1 cut(s) 1226
BbvI GCAGC 5 cut(s) 445, 722, 815, 895, 1449
BccI CCATC 7 cut(s) 31, 91, 322, 576, 1063, 1896, 2122
BceAI ACGGC 4 cut(s) 308, 558, 1450, 1751
BciT130I CCWGG 1 cut(s) 18
BciVI GTATCC 1 cut(s) 1900
BclI TGATCA 1 cut(s) 1797
BcnI CCSGG 1 cut(s) 1136
BcoDI GTCTC 7 cut(s) 187, 603, 967, 987, 1434, 1597, 1665
BfaI CTAG 7 cut(s) 440, 581, 741, 1037, 1107, 1254, 1589
BfmI CTRYAG 1 cut(s) 940
BfrI CTTAAG 1 cut(s) 1781
BfuAI ACCTGC 1 cut(s) 331
BfuI GTATCC 1 cut(s) 1900
BglII AGATCT 1 cut(s) 1113
BlpI GCTNAGC 1 cut(s) 1458
Bme1390I CCNGG 2 cut(s) 18, 1136
Bme18I GGWCC 4 cut(s) 20, 65, 454, 659
BmeT110I CYCGRG 1 cut(s) 593
BmgT120I GGNCC 4 cut(s) 20, 65, 454, 659
BmiI GGNNCC 3 cut(s) 67, 455, 557
BmrFI CCNGG 2 cut(s) 18, 1136
BmsI GCATC 6 cut(s) 722, 920, 1147, 1298, 1354, 1939
BpiI GAAGAC 1 cut(s) 1226
BplI GAGNNNNNCTC 2 cut(s) 587, 619
BpmI CTGGAG 1 cut(s) 449
Bpu10I CCTNAGC 2 cut(s) 818, 1190
Bpu1102I GCTNAGC 1 cut(s) 1458
BpuEI CTTGAG 3 cut(s) 128, 461, 1019
BpuMI CCSGG 1 cut(s) 1136
BsaAI YACGTR 2 cut(s) 126, 722
BsaI GGTCTC 2 cut(s) 187, 987
BsaJI CCNNGG 7 cut(s) 16, 108, 505, 559, 1579, 1613, 1767
BsaWI WCCGGW 6 cut(s) 238, 256, 274, 631, 645, 1215
BsaXI ACNNNNNCTCC 6 cut(s) 76, 106, 1998, 2012, 2028, 2042
Bsc4I CCNNNNNNNGG 5 cut(s) 98, 329, 1374, 1619, 2066
Bse118I RCCGGY 5 cut(s) 238, 256, 274, 1185, 1394
Bse1I ACTGG 2 cut(s) 77, 517
Bse21I CCTNAGG 1 cut(s) 367
Bse3DI GCAATG 2 cut(s) 1472, 1718
BseAI TCCGGA 2 cut(s) 631, 1215
BseBI CCWGG 1 cut(s) 18
BseDI CCNNGG 7 cut(s) 16, 108, 505, 559, 1579, 1613, 1767
BseGI GGATG 5 cut(s) 23, 568, 1010, 1055, 1933
BseLI CCNNNNNNNGG 5 cut(s) 98, 329, 1374, 1619, 2066
BseMI GCAATG 2 cut(s) 1472, 1718
BseMII CTCAG 6 cut(s) 23, 330, 381, 1449, 1587, 2030
BseNI ACTGG 2 cut(s) 77, 517
BseRI GAGGAG 4 cut(s) 131, 355, 458, 866
BseXI GCAGC 5 cut(s) 445, 722, 815, 895, 1449
BseYI CCCAGC 1 cut(s) 167
Bsh1236I CGCG 1 cut(s) 833
BshFI GGCC 2 cut(s) 1017, 1766
BshTI ACCGGT 3 cut(s) 238, 256, 274
BsiHKCI CYCGRG 1 cut(s) 593
BslFI GGGAC 5 cut(s) 51, 114, 150, 158, 467
BslI CCNNNNNNNGG 5 cut(s) 98, 329, 1374, 1619, 2066
BsmAI GTCTC 7 cut(s) 187, 603, 967, 987, 1434, 1597, 1665
BsmBI CGTCTC 2 cut(s) 1434, 1665
BsmFI GGGAC 5 cut(s) 51, 114, 150, 158, 467
BsnI GGCC 2 cut(s) 1017, 1766
Bso31I GGTCTC 2 cut(s) 187, 987
BsoBI CYCGRG 1 cut(s) 593
Bsp13I TCCGGA 2 cut(s) 631, 1215
Bsp143I GATC 9 cut(s) 30, 347, 728, 931, 1113, 1541, 1682, 1797, 2139
Bsp1720I GCTNAGC 1 cut(s) 1458
Bsp19I CCATGG 2 cut(s) 559, 1613
BspANI GGCC 2 cut(s) 1017, 1766
BspCNI CTCAG 6 cut(s) 22, 331, 380, 1450, 1588, 2031
BspEI TCCGGA 2 cut(s) 631, 1215
BspFNI CGCG 1 cut(s) 833
BspLI GGNNCC 3 cut(s) 67, 455, 557
BspMI ACCTGC 1 cut(s) 331
BspPI GGATC 6 cut(s) 25, 342, 723, 926, 1549, 2134
BspQI GCTCTTC 1 cut(s) 1602
BspTI CTTAAG 1 cut(s) 1781
BspTNI GGTCTC 2 cut(s) 187, 987
BsrBI CCGCTC 1 cut(s) 137
BsrDI GCAATG 2 cut(s) 1472, 1718
BsrFI RCCGGY 5 cut(s) 238, 256, 274, 1185, 1394
BsrI ACTGG 2 cut(s) 77, 517
BssAI RCCGGY 5 cut(s) 238, 256, 274, 1185, 1394
BssECI CCNNGG 7 cut(s) 16, 108, 505, 559, 1579, 1613, 1767
BssMI GATC 9 cut(s) 30, 347, 728, 931, 1113, 1541, 1682, 1797, 2139
BssNAI GTATAC 2 cut(s) 677, 1243
BssSI CACGAG 2 cut(s) 808, 1412
BssT1I CCWWGG 3 cut(s) 559, 1579, 1613
Bst1107I GTATAC 2 cut(s) 677, 1243
Bst2BI CACGAG 2 cut(s) 808, 1412
Bst2UI CCWGG 1 cut(s) 18
Bst4CI ACNGT 2 cut(s) 1283, 1445
Bst6I CTCTTC 3 cut(s) 292, 1602, 1935
BstAFI CTTAAG 1 cut(s) 1781
BstBAI YACGTR 2 cut(s) 126, 722
BstC8I GCNNGC 4 cut(s) 868, 881, 1709, 1778
BstDEI CTNAG 8 cut(s) 9, 339, 367, 818, 1190, 1458, 1596, 2039
BstDSI CCRYGG 4 cut(s) 505, 559, 1613, 1767
BstEII GGTNACC 1 cut(s) 371
BstF5I GGATG 5 cut(s) 23, 568, 1010, 1055, 1933
BstFNI CGCG 1 cut(s) 833
BstHHI GCGC 1 cut(s) 879
BstKTI GATC 9 cut(s) 33, 350, 731, 934, 1116, 1544, 1685, 1800, 2142
BstMAI GTCTC 7 cut(s) 187, 603, 967, 987, 1434, 1597, 1665
BstMBI GATC 9 cut(s) 30, 347, 728, 931, 1113, 1541, 1682, 1797, 2139
BstMWI GCNNNNNNNGC 6 cut(s) 876, 908, 1166, 1295, 1397, 1786
BstNI CCWGG 1 cut(s) 18
BstNSI RCATGY 1 cut(s) 1711
BstPI GGTNACC 1 cut(s) 371
BstSCI CCNGG 2 cut(s) 16, 1134
BstSFI CTRYAG 1 cut(s) 940
BstSNI TACGTA 1 cut(s) 722
BstUI CGCG 1 cut(s) 833
BstV1I GCAGC 5 cut(s) 445, 722, 815, 895, 1449
BstV2I GAAGAC 1 cut(s) 1226
BstX2I RGATCY 5 cut(s) 30, 347, 728, 1113, 1541
BstXI CCANNNNNNTGG 1 cut(s) 1519
BstYI RGATCY 5 cut(s) 30, 347, 728, 1113, 1541
BstZ17I GTATAC 2 cut(s) 677, 1243
Bsu36I CCTNAGG 1 cut(s) 367
BsuI GTATCC 1 cut(s) 1900
BsuRI GGCC 2 cut(s) 1017, 1766
BtgI CCRYGG 4 cut(s) 505, 559, 1613, 1767
BtgZI GCGATG 2 cut(s) 341, 1313
BtsCI GGATG 5 cut(s) 23, 568, 1010, 1055, 1933
BtsIMutI CAGTG 5 cut(s) 336, 510, 1299, 1725, 1825
BveI ACCTGC 1 cut(s) 331
Cac8I GCNNGC 4 cut(s) 868, 881, 1709, 1778
CfoI GCGC 1 cut(s) 879
Cfr10I RCCGGY 5 cut(s) 238, 256, 274, 1185, 1394
Cfr13I GGNCC 4 cut(s) 20, 65, 454, 659
CseI GACGC 2 cut(s) 160, 1830
Csp6I GTAC 4 cut(s) 127, 694, 1171, 2002
CspAI ACCGGT 3 cut(s) 238, 256, 274
CviAII CATG 8 cut(s) 458, 560, 1246, 1519, 1614, 1708, 1795, 1825
CviQI GTAC 4 cut(s) 127, 694, 1171, 2002
DdeI CTNAG 8 cut(s) 9, 339, 367, 818, 1190, 1458, 1596, 2039
DpnI GATC 9 cut(s) 32, 349, 730, 933, 1115, 1543, 1684, 1799, 2141
DpnII GATC 9 cut(s) 30, 347, 728, 931, 1113, 1541, 1682, 1797, 2139
DraI TTTAAA 3 cut(s) 309, 622, 792
EaeI YGGCCR 2 cut(s) 1015, 1764
Eam1104I CTCTTC 3 cut(s) 292, 1602, 1935
EarI CTCTTC 3 cut(s) 292, 1602, 1935
EciI GGCGGA 2 cut(s) 340, 1452
Eco105I TACGTA 1 cut(s) 722
Eco130I CCWWGG 3 cut(s) 559, 1579, 1613
Eco31I GGTCTC 2 cut(s) 187, 987
Eco47I GGWCC 4 cut(s) 20, 65, 454, 659
Eco57I CTGAAG 1 cut(s) 1257
Eco81I CCTNAGG 1 cut(s) 367
Eco88I CYCGRG 1 cut(s) 593
Eco91I GGTNACC 1 cut(s) 371
EcoO109I RGGNCCY 1 cut(s) 659
EcoO65I GGTNACC 1 cut(s) 371
EcoRII CCWGG 1 cut(s) 16
EcoT14I CCWWGG 3 cut(s) 559, 1579, 1613
ErhI CCWWGG 3 cut(s) 559, 1579, 1613
Esp3I CGTCTC 2 cut(s) 1434, 1665
FaeI CATG 8 cut(s) 461, 563, 1249, 1522, 1617, 1711, 1798, 1828
FalI AAGNNNNNCTT 4 cut(s) 1071, 1103, 1611, 1643
FaqI GGGAC 5 cut(s) 51, 114, 150, 158, 467
FatI CATG 8 cut(s) 457, 559, 1245, 1518, 1613, 1707, 1794, 1824
FbaI TGATCA 1 cut(s) 1797
FblI GTMKAC 3 cut(s) 676, 1242, 1844
FokI GGATG 5 cut(s) 10, 555, 997, 1042, 1940
FspBI CTAG 7 cut(s) 440, 581, 741, 1037, 1107, 1254, 1589
GlaI GCGC 1 cut(s) 878
GsaI CCCAGC 1 cut(s) 171
GsuI CTGGAG 1 cut(s) 449
HaeIII GGCC 2 cut(s) 1017, 1766
HgaI GACGC 2 cut(s) 160, 1830
HhaI GCGC 1 cut(s) 879
Hin1II CATG 8 cut(s) 461, 563, 1249, 1522, 1617, 1711, 1798, 1828
Hin6I GCGC 1 cut(s) 877
HinP1I GCGC 1 cut(s) 877
HincII GTYRAC 4 cut(s) 211, 1483, 1845, 2055
HindII GTYRAC 4 cut(s) 211, 1483, 1845, 2055
HindIII AAGCTT 4 cut(s) 479, 868, 1625, 1778
HphI GGTGA 6 cut(s) 81, 312, 1565, 1675, 1872, 1984
Hpy166II GTNNAC 7 cut(s) 211, 677, 1243, 1483, 1845, 1880, 2055
Hpy8I GTNNAC 7 cut(s) 211, 677, 1243, 1483, 1845, 1880, 2055
Hpy99I CGWCG 1 cut(s) 1846
HpyAV CCTTC 6 cut(s) 417, 503, 524, 883, 898, 1139
HpyCH4III ACNGT 2 cut(s) 1283, 1445
HpyCH4IV ACGT 5 cut(s) 125, 213, 721, 958, 1533
HpyCH4V TGCA 7 cut(s) 911, 1228, 1289, 1465, 1518, 1657, 1711
HpyF10VI GCNNNNNNNGC 6 cut(s) 876, 908, 1166, 1295, 1397, 1786
HpyF3I CTNAG 8 cut(s) 9, 339, 367, 818, 1190, 1458, 1596, 2039
HpySE526I ACGT 5 cut(s) 125, 213, 721, 958, 1533
Hsp92II CATG 8 cut(s) 461, 563, 1249, 1522, 1617, 1711, 1798, 1828
HspAI GCGC 1 cut(s) 877
Kpn2I TCCGGA 2 cut(s) 631, 1215
Ksp22I TGATCA 1 cut(s) 1797
Kzo9I GATC 9 cut(s) 30, 347, 728, 931, 1113, 1541, 1682, 1797, 2139
LguI GCTCTTC 1 cut(s) 1602
LmnI GCTCC 5 cut(s) 52, 430, 561, 814, 1250
Lsp1109I GCAGC 5 cut(s) 445, 722, 815, 895, 1449
LweI GCATC 6 cut(s) 722, 920, 1147, 1298, 1354, 1939
MaeI CTAG 7 cut(s) 440, 581, 741, 1037, 1107, 1254, 1589
MaeII ACGT 5 cut(s) 125, 213, 721, 958, 1533
MaeIII GTNAC 8 cut(s) 371, 488, 587, 1181, 1331, 1404, 1529, 1820
MalI GATC 9 cut(s) 32, 349, 730, 933, 1115, 1543, 1684, 1799, 2141
MbiI CCGCTC 1 cut(s) 137
MboI GATC 9 cut(s) 30, 347, 728, 931, 1113, 1541, 1682, 1797, 2139
MflI RGATCY 5 cut(s) 30, 347, 728, 1113, 1541
MluCI AATT 1 cut(s) 608
MlyI GAGTC 5 cut(s) 32, 510, 605, 1216, 1882
MmeI TCCRAC 2 cut(s) 66, 1910
MroI TCCGGA 2 cut(s) 631, 1215
MslI CAYNNNNRTG 1 cut(s) 957
MspA1I CMGCKG 1 cut(s) 436
MspCI CTTAAG 1 cut(s) 1781
MspR9I CCNGG 2 cut(s) 18, 1136
MvaI CCWGG 1 cut(s) 18
MvnI CGCG 1 cut(s) 833
MwoI GCNNNNNNNGC 6 cut(s) 876, 908, 1166, 1295, 1397, 1786
NciI CCSGG 1 cut(s) 1136
NcoI CCATGG 2 cut(s) 559, 1613
NdeII GATC 9 cut(s) 30, 347, 728, 931, 1113, 1541, 1682, 1797, 2139
NlaIII CATG 8 cut(s) 461, 563, 1249, 1522, 1617, 1711, 1798, 1828
NlaIV GGNNCC 3 cut(s) 67, 455, 557
NmuCI GTSAC 4 cut(s) 1181, 1331, 1529, 1820
NspI RCATGY 1 cut(s) 1711
OliI CACNNNNGTG 1 cut(s) 957
PaeI GCATGC 1 cut(s) 1711
PaeR7I CTCGAG 1 cut(s) 593
PaqCI CACCTGC 1 cut(s) 331
PciSI GCTCTTC 1 cut(s) 1602
PcsI WCGNNNNNNNCGW 4 cut(s) 502, 806, 1379, 1856
PfeI GAWTC 8 cut(s) 461, 637, 649, 1064, 1127, 1753, 2035, 2045
PflFI GACNNNGTC 1 cut(s) 1644
PfoI TCCNGGA 1 cut(s) 1134
PinAI ACCGGT 3 cut(s) 238, 256, 274
PleI GAGTC 5 cut(s) 32, 509, 604, 1216, 1882
PpsI GAGTC 5 cut(s) 32, 509, 604, 1216, 1882
Ppu21I YACGTR 2 cut(s) 126, 722
PpuMI RGGWCCY 1 cut(s) 659
PsiI TTATAA 2 cut(s) 1278, 1631
Psp5II RGGWCCY 1 cut(s) 659
Psp6I CCWGG 1 cut(s) 16
PspEI GGTNACC 1 cut(s) 371
PspFI CCCAGC 1 cut(s) 167
PspGI CCWGG 1 cut(s) 16
PspN4I GGNNCC 3 cut(s) 67, 455, 557
PspPI GGNCC 4 cut(s) 20, 65, 454, 659
PspPPI RGGWCCY 1 cut(s) 659
PspXI VCTCGAGB 1 cut(s) 593
PsuI RGATCY 5 cut(s) 30, 347, 728, 1113, 1541
PsyI GACNNNGTC 1 cut(s) 1644
RsaI GTAC 4 cut(s) 128, 695, 1172, 2003
RsaNI GTAC 4 cut(s) 127, 694, 1171, 2002
RseI CAYNNNNRTG 1 cut(s) 957
SalI GTCGAC 1 cut(s) 1843
SapI GCTCTTC 1 cut(s) 1602
Sau3AI GATC 9 cut(s) 30, 347, 728, 931, 1113, 1541, 1682, 1797, 2139
Sau96I GGNCC 4 cut(s) 20, 65, 454, 659
SchI GAGTC 5 cut(s) 32, 510, 605, 1216, 1882
ScrFI CCNGG 2 cut(s) 18, 1136
SfaNI GCATC 6 cut(s) 722, 920, 1147, 1298, 1354, 1939
SfcI CTRYAG 1 cut(s) 940
Sfr274I CTCGAG 1 cut(s) 593
SgrAI CRCCGGYG 1 cut(s) 1394
SinI GGWCC 4 cut(s) 20, 65, 454, 659
SlaI CTCGAG 1 cut(s) 593
SmiMI CAYNNNNRTG 1 cut(s) 957
SmlI CTYRAG 5 cut(s) 143, 476, 593, 998, 1781
SmoI CTYRAG 5 cut(s) 143, 476, 593, 998, 1781
SnaBI TACGTA 1 cut(s) 722
SphI GCATGC 1 cut(s) 1711
Sse9I AATT 1 cut(s) 608
SspMI CTAG 7 cut(s) 440, 581, 741, 1037, 1107, 1254, 1589
StyD4I CCNGG 2 cut(s) 16, 1134
StyI CCWWGG 3 cut(s) 559, 1579, 1613
TaaI ACNGT 2 cut(s) 1283, 1445
TaiI ACGT 5 cut(s) 128, 216, 724, 961, 1536
TaqI TCGA 7 cut(s) 244, 384, 594, 1074, 1844, 1850, 2048
TaqII GACCGA 1 cut(s) 122
TasI AATT 1 cut(s) 608
TauI GCSGC 7 cut(s) 137, 439, 548, 710, 1043, 1394, 1789
TfiI GAWTC 8 cut(s) 461, 637, 649, 1064, 1127, 1753, 2035, 2045
TscAI CASTG 5 cut(s) 343, 517, 1299, 1732, 1825
TseFI GTSAC 4 cut(s) 1181, 1331, 1529, 1820
TseI GCWGC 5 cut(s) 433, 710, 803, 908, 1462
Tsp45I GTSAC 4 cut(s) 1181, 1331, 1529, 1820
TspDTI ATGAA 6 cut(s) 1316, 1562, 1736, 1851, 1947, 1953
TspGWI ACGGA 3 cut(s) 494, 1976, 2019
TspRI CASTG 5 cut(s) 343, 517, 1299, 1732, 1825
Tth111I GACNNNGTC 1 cut(s) 1644
Vha464I CTTAAG 1 cut(s) 1781
VpaK11BI GGWCC 4 cut(s) 20, 65, 454, 659
XapI RAATTY 1 cut(s) 608
XbaI TCTAGA 1 cut(s) 740
XceI RCATGY 1 cut(s) 1711
XcmI CCANNNNNNNNNTGG 1 cut(s) 424
XhoI CTCGAG 1 cut(s) 593
XmiI GTMKAC 3 cut(s) 676, 1242, 1844
XspI CTAG 7 cut(s) 440, 581, 741, 1037, 1107, 1254, 1589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.