Rh7CG071900

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000255
Physical Location & Seq
Reverse (-)
5101780 .. 5106633
4854 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG071900.1

Sequence Viewer

Length: 1728 bp
ATGGGTCCGGCGGATCATCCACCTAGAGATGTTAAACTGCTGAGGCTTTGGGAGAAACTCATCGCCGTCAAATCTAACAAGAAAAAACTCGAGAATGAGGAGTATAAAACTGTTCAAGCAGAATGGGCAGCGGATAGAGACGAACTGAAAAGTGATGAAGCTAGAGAACTGATGCATCAAAAGATCATAGACAAGACCAAGAATGCCGTGGCTAGGTATGAGCAAGACTCGGATTTGAAGTTCCTATATGAACAAATTTGGGATGTGTTTGGGGATTGCTTGAAGTCCATGGAGGCGGACACGGTGGCTGAGAGGAACGAGATGATCCGATTGAAAAAAGAAAAAGTCAGGGAATTGAGGTATGAAAGAATCTATGACATGGCCAGGAAGGTGGTTTCCAAGTATCAGCAAGACTCCAATTTTCAGTTGCTTCACGAGCAGATTTCTGATGTTTTCGCCGAGTGCTTGAGATCTGACATGGAATGCTTGAAGAAGCACCAGAGAAACAAGATAAGCCTCGCTGCGAAATGGTGCCCTTCCCTCGACTCCTCCTTCGACAAGGCCACTTTGCTCTGCGAAAGCATTGCCAGGAAGGTTTTCCCGCGTGAATTGTACCCGGAGTATCAGGGACTTGAGGAGGCACACTATGCTTACAGAGTGAGAGACCGGCTGAGGAAGGAGGTTTATGTGCCGTTGAGGAGGGCATTGGAATTGCCGGAACTTTATATGACTGACAGAGAGTGGAATTCACTTCCTTACAACAGGGTGGCCTCTGTGGCAATGAAGCTCTACAAACATAGGTTCTTTGAGAAGGACTGTGAGAGGTTTGAAAAATATTTGGCGGAAGTGAAAGAAGGTGAGGCCAAGATTGCGGCCGGTGCTCTGCTTCCACATGAGATCATGGCCTCTCTGAATGATGGGGATGGAGGGCAAGTGGCTGAGCTTCAGTGGAAGAGAATGGTGGAGGACCTGGTGGAGCTTGGCAAGCTGAGGAATTGCTTGGCTGTGTGTGACGTGTCCGGAAGCATGGAAGGGACTCCTATGGAGGTGTGTGTGGCTTTGGGTCTGTTGGTGTCGGAATTGAGTGAAGAGCCATGGAAAGGAAAGGTGATCACTTTCAGTCAGAACCCTCAGTTGCATTTGATTCAAGGCGAGGATCTTAGCTCCAAGTGCGAGTTTGTGACGAGGATGGACTGGGGGATGAACACTGATTTTCAAAAGGTGTTTGATCTGATTCTCCAAGTGGCTGTGAATGGGAACTTGAAGCCGGAGCAAATGATAAAGAGGGTGTTTGTGTTTAGCGACATGGAGTTTGATCAGGCTTCAGGGCATATATCACAGTTCTATGATAGTTATTTGAGGTATCATCATTGTGGTCAAAGGGAGAAAAGCAATAGTTGGGAGACTGATTATGAGGTGATACAGAGGAAGTTTAGGGAGAAAGGGTACGGGGATGCAGTGCCACAGATAGTGTTTTGGAATCTGAGGGACTCTAGGTCTACGCCGGTAACGGAGACACAAAATGGAGTGGCGCTGGTCCAGTTTGAAGAATCAACACACAGAGACTCGTTGAGATCTATGAGGATAACGATTGAAACGTACGGATCCATGAGTACCATAGGAGACATCCAGCTGCACGCACTAGTTGTTGATGCCAATGAGGAACATGAAGCACTGCTCAAACAGGAGCCTCAAGTGGAGAGGAAGAACCAATTGATGGAATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

575

Amino Acids

67.16

Weight (kDa)

5.59

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 103 - 330 6.6e-82 Domain of unknown function (DUF2828)
DUF7788 PF25043 332 - 514 8.1e-74 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 531
AccB7I CCANNNNNTGG 1 cut(s) 1717
AccI GTMKAC 1 cut(s) 1499
AccII CGCG 1 cut(s) 604
AccIII TCCGGA 1 cut(s) 1019
AciI CCGC 6 cut(s) 11, 131, 296, 602, 842, 872
AclWI GGATC 5 cut(s) 21, 319, 1164, 1599, 1612
AcoI YGGCCR 2 cut(s) 381, 873
AcsI RAATTY 2 cut(s) 255, 745
AcuI CTGAAG 2 cut(s) 929, 1308
AfaI GTAC 4 cut(s) 614, 1448, 1601, 1615
AfiI CCNNNNNNNGG 3 cut(s) 213, 1100, 1717
AflIII ACRYGT 1 cut(s) 1014
AhdI GACNNNNNGTC 1 cut(s) 1495
AhlI ACTAGT 1 cut(s) 1642
AjiI CACGTC 1 cut(s) 1015
AjnI CCWGG 3 cut(s) 383, 587, 969
AloI GAACNNNNNNTCC 2 cut(s) 224, 256
AluBI AGCT 7 cut(s) 161, 787, 943, 979, 988, 1164, 1633
AluI AGCT 7 cut(s) 161, 787, 943, 979, 988, 1164, 1633
Alw21I GWGCWC 1 cut(s) 883
Alw26I GTCTC 6 cut(s) 132, 657, 1397, 1508, 1557, 1617
AlwI GGATC 5 cut(s) 21, 319, 1164, 1599, 1612
Ama87I CYCGRG 1 cut(s) 89
Aor13HI TCCGGA 1 cut(s) 1019
AoxI GGCC 6 cut(s) 381, 561, 768, 861, 873, 903
ApeKI GCWGC 3 cut(s) 128, 521, 1633
ApoI RAATTY 2 cut(s) 255, 745
ArsI GACNNNNNNTTYG 4 cut(s) 536, 568, 1295, 1327
Asp700I GAANNNNTTC 1 cut(s) 596
AspLEI GCGC 1 cut(s) 1534
AspS9I GGNCC 3 cut(s) 5, 967, 1537
AsuC2I CCSGG 1 cut(s) 617
AsuHPI GGTGA 3 cut(s) 869, 1120, 1429
AvaI CYCGRG 1 cut(s) 89
AvaII GGWCC 3 cut(s) 5, 967, 1537
BaeGI GKGCMC 1 cut(s) 536
BalI TGGCCA 1 cut(s) 383
BamHI GGATCC 1 cut(s) 1604
BanI GGYRCC 1 cut(s) 531
BauI CACGAG 1 cut(s) 434
Bbv12I GWGCWC 1 cut(s) 883
BbvCI CCTCAGC 3 cut(s) 41, 671, 989
BbvI GCAGC 3 cut(s) 140, 508, 1620
BccI CCATC 4 cut(s) 911, 917, 1183, 1711
BceAI ACGGC 3 cut(s) 50, 191, 676
BcgI CGANNNNNNTGC 2 cut(s) 566, 600
BciT130I CCWGG 3 cut(s) 385, 589, 971
BclI TGATCA 2 cut(s) 1110, 1315
BcnI CCSGG 1 cut(s) 617
BcoDI GTCTC 6 cut(s) 132, 657, 1397, 1508, 1557, 1617
BcuI ACTAGT 1 cut(s) 1642
BfaI CTAG 5 cut(s) 24, 162, 213, 1494, 1643
BfoI RGCGCY 1 cut(s) 1535
BglI GCCNNNNNGGC 1 cut(s) 776
BglII AGATCT 2 cut(s) 470, 1574
BisI GCNGC 4 cut(s) 129, 522, 873, 1634
BlpI GCTNAGC 1 cut(s) 939
BlsI GCNGC 4 cut(s) 130, 523, 874, 1635
Bme1390I CCNGG 4 cut(s) 385, 589, 617, 971
Bme18I GGWCC 3 cut(s) 5, 967, 1537
BmeRI GACNNNNNGTC 1 cut(s) 1495
BmeT110I CYCGRG 1 cut(s) 89
BmgBI CACGTC 1 cut(s) 1015
BmgT120I GGNCC 3 cut(s) 5, 967, 1537
BmiI GGNNCC 4 cut(s) 6, 533, 1606, 1689
BmrFI CCNGG 4 cut(s) 385, 589, 617, 971
BmrI ACTGGG 1 cut(s) 1204
BmsI GCATC 4 cut(s) 162, 184, 1444, 1642
BmuI ACTGGG 1 cut(s) 1204
BplI GAGNNNNNCTC 2 cut(s) 212, 244
Bpu10I CCTNAGC 3 cut(s) 41, 671, 989
Bpu1102I GCTNAGC 1 cut(s) 939
BpuEI CTTGAG 3 cut(s) 487, 653, 1677
BpuMI CCSGG 1 cut(s) 617
BsaI GGTCTC 1 cut(s) 657
BsaJI CCNNGG 3 cut(s) 207, 288, 1094
BsaWI WCCGGW 1 cut(s) 1019
BsaXI ACNNNNNCTCC 4 cut(s) 918, 948, 1430, 1460
Bsc4I CCNNNNNNNGG 3 cut(s) 213, 1100, 1717
Bse118I RCCGGY 3 cut(s) 666, 875, 1504
Bse1I ACTGG 2 cut(s) 1199, 1540
Bse3DI GCAATG 2 cut(s) 582, 786
BseAI TCCGGA 1 cut(s) 1019
BseBI CCWGG 3 cut(s) 385, 589, 971
BseDI CCNNGG 3 cut(s) 207, 288, 1094
BseGI GGATG 7 cut(s) 16, 268, 928, 1194, 1206, 1459, 1626
BseLI CCNNNNNNNGG 3 cut(s) 213, 1100, 1717
BseMI GCAATG 2 cut(s) 582, 786
BseMII CTCAG 7 cut(s) 32, 300, 662, 930, 980, 1145, 1475
BseNI ACTGG 2 cut(s) 1199, 1540
BseRI GAGGAG 4 cut(s) 113, 538, 650, 712
BseSI GKGCMC 1 cut(s) 536
BseX3I CGGCCG 1 cut(s) 873
BseXI GCAGC 3 cut(s) 140, 508, 1620
BsgI GTGCAG 1 cut(s) 1619
Bsh1236I CGCG 1 cut(s) 604
Bsh1285I CGRYCG 1 cut(s) 876
BshFI GGCC 6 cut(s) 383, 563, 770, 863, 875, 905
BshNI GGYRCC 1 cut(s) 531
BsiEI CGRYCG 1 cut(s) 876
BsiHKAI GWGCWC 1 cut(s) 883
BsiHKCI CYCGRG 1 cut(s) 89
BsiSI CCGG 8 cut(s) 8, 617, 667, 716, 876, 1020, 1268, 1505
BsiWI CGTACG 1 cut(s) 1599
BslFI GGGAC 3 cut(s) 642, 1048, 1502
BslI CCNNNNNNNGG 3 cut(s) 213, 1100, 1717
BsmAI GTCTC 6 cut(s) 132, 657, 1397, 1508, 1557, 1617
BsmBI CGTCTC 1 cut(s) 132
BsmFI GGGAC 3 cut(s) 642, 1048, 1502
BsmI GAATGC 2 cut(s) 208, 488
BsnI GGCC 6 cut(s) 383, 563, 770, 863, 875, 905
Bso31I GGTCTC 1 cut(s) 657
BsoBI CYCGRG 1 cut(s) 89
Bsp1286I GDGCHC 2 cut(s) 536, 883
Bsp13I TCCGGA 1 cut(s) 1019
Bsp1720I GCTNAGC 1 cut(s) 939
Bsp19I CCATGG 2 cut(s) 288, 1094
BspACI CCGC 6 cut(s) 11, 131, 296, 602, 842, 872
BspANI GGCC 6 cut(s) 383, 563, 770, 863, 875, 905
BspCNI CTCAG 7 cut(s) 33, 301, 663, 931, 981, 1144, 1476
BspEI TCCGGA 1 cut(s) 1019
BspFNI CGCG 1 cut(s) 604
BspLI GGNNCC 4 cut(s) 6, 533, 1606, 1689
BspPI GGATC 5 cut(s) 21, 319, 1164, 1599, 1612
BspQI GCTCTTC 1 cut(s) 1083
BspT107I GGYRCC 1 cut(s) 531
BspTNI GGTCTC 1 cut(s) 657
BsrDI GCAATG 2 cut(s) 582, 786
BsrFI RCCGGY 3 cut(s) 666, 875, 1504
BsrI ACTGG 2 cut(s) 1199, 1540
BssAI RCCGGY 3 cut(s) 666, 875, 1504
BssECI CCNNGG 3 cut(s) 207, 288, 1094
BssSI CACGAG 1 cut(s) 434
BssT1I CCWWGG 2 cut(s) 288, 1094
Bst2BI CACGAG 1 cut(s) 434
Bst2UI CCWGG 3 cut(s) 385, 589, 971
Bst4CI ACNGT 4 cut(s) 112, 304, 818, 1341
Bst6I CTCTTC 2 cut(s) 947, 1083
BstAPI GCANNNNNTGC 1 cut(s) 647
BstC8I GCNNGC 2 cut(s) 986, 1638
BstDEI CTNAG 8 cut(s) 41, 309, 671, 939, 989, 1131, 1160, 1484
BstDSI CCRYGG 3 cut(s) 207, 288, 1094
BstF5I GGATG 7 cut(s) 16, 268, 928, 1194, 1206, 1459, 1626
BstFNI CGCG 1 cut(s) 604
BstH2I RGCGCY 1 cut(s) 1535
BstHHI GCGC 1 cut(s) 1534
BstMAI GTCTC 6 cut(s) 132, 657, 1397, 1508, 1557, 1617
BstMCI CGRYCG 1 cut(s) 876
BstMWI GCNNNNNNNGC 8 cut(s) 125, 436, 647, 776, 869, 878, 985, 1170
BstNI CCWGG 3 cut(s) 385, 589, 971
BstSCI CCNGG 4 cut(s) 383, 587, 615, 969
BstSLI GKGCMC 1 cut(s) 536
BstUI CGCG 1 cut(s) 604
BstV1I GCAGC 3 cut(s) 140, 508, 1620
BstX2I RGATCY 4 cut(s) 470, 1156, 1574, 1604
BstXI CCANNNNNNTGG 1 cut(s) 391
BstYI RGATCY 4 cut(s) 470, 1156, 1574, 1604
BstZI CGGCCG 1 cut(s) 873
BsuRI GGCC 6 cut(s) 383, 563, 770, 863, 875, 905
BtgI CCRYGG 3 cut(s) 207, 288, 1094
BtgZI GCGATG 1 cut(s) 46
BtrI CACGTC 1 cut(s) 1015
BtsCI GGATG 7 cut(s) 16, 268, 928, 1194, 1206, 1459, 1626
BtsI GCAGTG 2 cut(s) 1464, 1673
BtsIMutI CAGTG 4 cut(s) 953, 1206, 1464, 1673
Cac8I GCNNGC 2 cut(s) 986, 1638
CfoI GCGC 1 cut(s) 1534
Cfr10I RCCGGY 3 cut(s) 666, 875, 1504
Cfr13I GGNCC 3 cut(s) 5, 967, 1537
CsiI ACCWGGT 1 cut(s) 969
Csp6I GTAC 4 cut(s) 613, 1447, 1600, 1614
CviQI GTAC 4 cut(s) 613, 1447, 1600, 1614
DdeI CTNAG 8 cut(s) 41, 309, 671, 939, 989, 1131, 1160, 1484
DriI GACNNNNNGTC 1 cut(s) 1495
EaeI YGGCCR 2 cut(s) 381, 873
EagI CGGCCG 1 cut(s) 873
Eam1104I CTCTTC 2 cut(s) 947, 1083
Eam1105I GACNNNNNGTC 1 cut(s) 1495
EarI CTCTTC 2 cut(s) 947, 1083
EciI GGCGGA 3 cut(s) 26, 311, 857
EclXI CGGCCG 1 cut(s) 873
Eco130I CCWWGG 2 cut(s) 288, 1094
Eco31I GGTCTC 1 cut(s) 657
Eco47I GGWCC 3 cut(s) 5, 967, 1537
Eco52I CGGCCG 1 cut(s) 873
Eco57I CTGAAG 2 cut(s) 929, 1308
Eco88I CYCGRG 1 cut(s) 89
EcoO109I RGGNCCY 1 cut(s) 967
EcoRI GAATTC 1 cut(s) 745
EcoRII CCWGG 3 cut(s) 383, 587, 969
EcoT14I CCWWGG 2 cut(s) 288, 1094
EcoT22I ATGCAT 1 cut(s) 177
ErhI CCWWGG 2 cut(s) 288, 1094
Esp3I CGTCTC 1 cut(s) 132
FaqI GGGAC 3 cut(s) 642, 1048, 1502
FauI CCCGC 1 cut(s) 609
FbaI TGATCA 2 cut(s) 1110, 1315
FblI GTMKAC 1 cut(s) 1499
Fnu4HI GCNGC 4 cut(s) 129, 522, 873, 1634
FokI GGATG 7 cut(s) 3, 275, 935, 1201, 1213, 1466, 1613
Fsp4HI GCNGC 4 cut(s) 129, 522, 873, 1634
FspBI CTAG 5 cut(s) 24, 162, 213, 1494, 1643
GlaI GCGC 1 cut(s) 1533
GluI GCNGC 4 cut(s) 129, 522, 873, 1634
HaeII RGCGCY 1 cut(s) 1535
HaeIII GGCC 6 cut(s) 383, 563, 770, 863, 875, 905
HapII CCGG 8 cut(s) 8, 617, 667, 716, 876, 1020, 1268, 1505
HhaI GCGC 1 cut(s) 1534
Hin6I GCGC 1 cut(s) 1532
HinP1I GCGC 1 cut(s) 1532
HpaII CCGG 8 cut(s) 8, 617, 667, 716, 876, 1020, 1268, 1505
HphI GGTGA 3 cut(s) 869, 1120, 1429
Hpy166II GTNNAC 1 cut(s) 1500
Hpy188I TCNGA 9 cut(s) 232, 329, 448, 475, 912, 1078, 1125, 1233, 1485
Hpy188III TCNNGA 3 cut(s) 91, 434, 1020
Hpy8I GTNNAC 1 cut(s) 1500
HpyAV CCTTC 8 cut(s) 382, 546, 562, 586, 670, 805, 848, 1025
HpyCH4III ACNGT 4 cut(s) 112, 304, 818, 1341
HpyCH4IV ACGT 2 cut(s) 1014, 1598
HpyCH4V TGCA 4 cut(s) 175, 1138, 1457, 1636
HpyF10VI GCNNNNNNNGC 8 cut(s) 125, 436, 647, 776, 869, 878, 985, 1170
HpyF3I CTNAG 8 cut(s) 41, 309, 671, 939, 989, 1131, 1160, 1484
HpySE526I ACGT 2 cut(s) 1014, 1598
HspAI GCGC 1 cut(s) 1532
Kpn2I TCCGGA 1 cut(s) 1019
Ksp22I TGATCA 2 cut(s) 1110, 1315
LguI GCTCTTC 1 cut(s) 1083
LmnI GCTCC 4 cut(s) 976, 1169, 1270, 1687
Lsp1109I GCAGC 3 cut(s) 140, 508, 1620
LweI GCATC 4 cut(s) 162, 184, 1444, 1642
MabI ACCWGGT 1 cut(s) 969
MaeI CTAG 5 cut(s) 24, 162, 213, 1494, 1643
MaeII ACGT 2 cut(s) 1014, 1598
MaeIII GTNAC 3 cut(s) 1010, 1180, 1507
MboII GAAGA 5 cut(s) 502, 964, 1100, 1559, 1717
MfeI CAATTG 1 cut(s) 1712
MflI RGATCY 4 cut(s) 470, 1156, 1574, 1604
MhlI GDGCHC 2 cut(s) 536, 883
MlsI TGGCCA 1 cut(s) 383
MluCI AATT 9 cut(s) 255, 353, 418, 608, 710, 745, 994, 1079, 1712
MluNI TGGCCA 1 cut(s) 383
MlyI GAGTC 6 cut(s) 221, 407, 539, 1030, 1484, 1559
MmeI TCCRAC 1 cut(s) 1056
Mox20I TGGCCA 1 cut(s) 383
Mph1103I ATGCAT 1 cut(s) 177
MroI TCCGGA 1 cut(s) 1019
MroXI GAANNNNTTC 1 cut(s) 596
MscI TGGCCA 1 cut(s) 383
MseI TTAA 1 cut(s) 33
MslI CAYNNNNRTG 1 cut(s) 1371
Msp20I TGGCCA 1 cut(s) 383
MspA1I CMGCKG 2 cut(s) 131, 1633
MspI CCGG 8 cut(s) 8, 617, 667, 716, 876, 1020, 1268, 1505
MspR9I CCNGG 4 cut(s) 385, 589, 617, 971
MunI CAATTG 1 cut(s) 1712
Mva1269I GAATGC 2 cut(s) 208, 488
MvaI CCWGG 3 cut(s) 385, 589, 971
MvnI CGCG 1 cut(s) 604
MwoI GCNNNNNNNGC 8 cut(s) 125, 436, 647, 776, 869, 878, 985, 1170
NciI CCSGG 1 cut(s) 617
NcoI CCATGG 2 cut(s) 288, 1094
NlaIV GGNNCC 4 cut(s) 6, 533, 1606, 1689
NmeAIII GCCGAG 1 cut(s) 484
NmuCI GTSAC 2 cut(s) 1010, 1180
NsiI ATGCAT 1 cut(s) 177
PaeR7I CTCGAG 1 cut(s) 89
PciSI GCTCTTC 1 cut(s) 1083
PcsI WCGNNNNNNNCGW 1 cut(s) 1595
PctI GAATGC 2 cut(s) 208, 488
PdmI GAANNNNTTC 1 cut(s) 596
PfeI GAWTC 5 cut(s) 369, 1144, 1234, 1480, 1550
Pfl23II CGTACG 1 cut(s) 1599
PflMI CCANNNNNTGG 1 cut(s) 1717
PkrI GCNGC 4 cut(s) 130, 523, 874, 1635
PleI GAGTC 6 cut(s) 221, 407, 539, 1030, 1484, 1559
PpsI GAGTC 6 cut(s) 221, 407, 539, 1030, 1484, 1559
PpuMI RGGWCCY 1 cut(s) 967
Psp5II RGGWCCY 1 cut(s) 967
Psp6I CCWGG 3 cut(s) 383, 587, 969
PspGI CCWGG 3 cut(s) 383, 587, 969
PspLI CGTACG 1 cut(s) 1599
PspN4I GGNNCC 4 cut(s) 6, 533, 1606, 1689
PspPI GGNCC 3 cut(s) 5, 967, 1537
PspPPI RGGWCCY 1 cut(s) 967
PsuI RGATCY 4 cut(s) 470, 1156, 1574, 1604
PvuII CAGCTG 1 cut(s) 1633
RsaI GTAC 4 cut(s) 614, 1448, 1601, 1615
RsaNI GTAC 4 cut(s) 613, 1447, 1600, 1614
RseI CAYNNNNRTG 1 cut(s) 1371
SapI GCTCTTC 1 cut(s) 1083
SaqAI TTAA 1 cut(s) 33
SatI GCNGC 4 cut(s) 129, 522, 873, 1634
Sau96I GGNCC 3 cut(s) 5, 967, 1537
SchI GAGTC 6 cut(s) 221, 407, 539, 1030, 1484, 1559
ScrFI CCNGG 4 cut(s) 385, 589, 617, 971
SduI GDGCHC 2 cut(s) 536, 883
SexAI ACCWGGT 1 cut(s) 969
SfaNI GCATC 4 cut(s) 162, 184, 1444, 1642
Sfr274I CTCGAG 1 cut(s) 89
SinI GGWCC 3 cut(s) 5, 967, 1537
SlaI CTCGAG 1 cut(s) 89
SmiMI CAYNNNNRTG 1 cut(s) 1371
SmlI CTYRAG 4 cut(s) 89, 466, 632, 1692
SmoI CTYRAG 4 cut(s) 89, 466, 632, 1692
SpeI ACTAGT 1 cut(s) 1642
Sse9I AATT 9 cut(s) 255, 353, 418, 608, 710, 745, 994, 1079, 1712
SsiI CCGC 6 cut(s) 11, 131, 296, 602, 842, 872
SspI AATATT 1 cut(s) 836
SspMI CTAG 5 cut(s) 24, 162, 213, 1494, 1643
StyD4I CCNGG 4 cut(s) 383, 587, 615, 969
StyI CCWWGG 2 cut(s) 288, 1094
TaaI ACNGT 4 cut(s) 112, 304, 818, 1341
TaiI ACGT 2 cut(s) 1017, 1601
TaqI TCGA 3 cut(s) 90, 543, 555
TasI AATT 9 cut(s) 255, 353, 418, 608, 710, 745, 994, 1079, 1712
TauI GCSGC 1 cut(s) 875
TfiI GAWTC 5 cut(s) 369, 1144, 1234, 1480, 1550
Tru1I TTAA 1 cut(s) 33
Tru9I TTAA 1 cut(s) 33
TscAI CASTG 4 cut(s) 953, 1213, 1464, 1680
TseFI GTSAC 2 cut(s) 1010, 1180
TseI GCWGC 3 cut(s) 128, 521, 1633
Tsp45I GTSAC 2 cut(s) 1010, 1180
TspDTI ATGAA 6 cut(s) 171, 264, 378, 797, 1217, 1683
TspGWI ACGGA 2 cut(s) 1526, 1617
TspRI CASTG 4 cut(s) 953, 1213, 1464, 1680
Van91I CCANNNNNTGG 1 cut(s) 1717
VpaK11BI GGWCC 3 cut(s) 5, 967, 1537
XapI RAATTY 2 cut(s) 255, 745
XcmI CCANNNNNNNNNTGG 1 cut(s) 205
XhoI CTCGAG 1 cut(s) 89
XmiI GTMKAC 1 cut(s) 1499
XmnI GAANNNNTTC 1 cut(s) 596
XspI CTAG 5 cut(s) 24, 162, 213, 1494, 1643
Zsp2I ATGCAT 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.