Rmu_ssc0000289.1_g000008

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000289.1
OG0000255
Physical Location & Seq
Forward (+)
33371 .. 34744
1374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000289.1_g000008.1.cds

Sequence Viewer

Length: 1374 bp
atggaggcggacacggaggctgagaggaacgagatgatccgattgaaaaaagaaaaagtcagggaattgaggtatgaaagaatctatgacatggccaggaaggtggtttccaagtatcagcaagactccaattttcagttgcttcacgagcagatttctgatgttttcgccgagtgcttgagatctgacatggaatgcttgaagaagcaccagagaaacaagataagcctcgcagcgaaatggtgcccttccctcgactcctccttcgacaaggccactttgctctgcgaaagcattgccaggaaggttttcccgcgtgaattgtacccggagtatcagggacttgaggaggcacactatgcttacagagtgagagaccggctgaggaaggaggtttatgtgccgttgaggagggcattggaattgccggaactttatatgactgacagagagtggaattcacttccttacaacagggtggcctctgtggcaatgaagctctacaaacataggttcattgagaaggactgtgagaggtttgaaaaatatttggcggaagtgaaagaaggtgaggccaagattgcggccggtgctctgcttccacatgagatcatagcctctctgaatgatggggatggagggcaagtggctgagcttcagtggaagagaatggtggaggacctggtggagcttggcaagctgaggaattgcttggctgtgtgtgacgtgtccggaagcatggaagggactcctatggaggtgtgtgtggctttgggtctgttggtgtctgaattgagtgaagagccatggaaaggaaaggtgatcactttcagtcagaaccctcagttgcatttgattcaaggcgaggatcttagctccaagtgcgagtttgtgaggaggatggaatgggggatgaacactgattttcaaaaggtgtttgatctgattctccaagtggctgtgaatgggaacttgaagccggagcaaatgataaagagggtgtttgtgtttagcgacatggagtttgatcaggcttcagggcatatatcacagttctatgatagttattgggggtatcatcattgtggtcaaagggagaaaagcaatagttgggagactgattatgaggtgatacagaggaagtttagggagaaagggtacggggatgcagtgccacagatagtgttttggaatctgagggactctaggtctacgccggtaacggagacacaaaatggagtggcgctggtgagtggcttctccaagaatctactcaagctgttcttggacaatgatggccaaattcggccggaccttatcatggaaaaagctatctctgggaaagagtatcagcatctagttgttgtggattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

457

Amino Acids

53.14

Weight (kDa)

5.75

Isoelectric Point (pI)

38.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 243
AccI GTMKAC 1 cut(s) 1211
AccII CGCG 1 cut(s) 316
AccIII TCCGGA 1 cut(s) 731
AciI CCGC 4 cut(s) 8, 314, 554, 584
AclWI GGATC 2 cut(s) 31, 876
AcoI YGGCCR 4 cut(s) 93, 585, 1297, 1307
AcsI RAATTY 2 cut(s) 457, 1302
AcuI CTGAAG 2 cut(s) 641, 1020
AfaI GTAC 2 cut(s) 326, 1160
AfiI CCNNNNNNNGG 2 cut(s) 812, 1321
AflIII ACRYGT 1 cut(s) 726
AgsI TTSAA 6 cut(s) 46, 202, 542, 860, 929, 976
AhdI GACNNNNNGTC 1 cut(s) 1207
AjiI CACGTC 1 cut(s) 727
AjnI CCWGG 3 cut(s) 95, 299, 681
AluBI AGCT 7 cut(s) 499, 655, 691, 700, 876, 1279, 1331
AluI AGCT 7 cut(s) 499, 655, 691, 700, 876, 1279, 1331
Alw21I GWGCWC 1 cut(s) 595
Alw26I GTCTC 3 cut(s) 369, 1109, 1220
AlwI GGATC 2 cut(s) 31, 876
Aor13HI TCCGGA 1 cut(s) 731
AoxI GGCC 7 cut(s) 93, 273, 480, 573, 585, 1297, 1307
ApeKI GCWGC 1 cut(s) 233
ApoI RAATTY 2 cut(s) 457, 1302
ArsI GACNNNNNNTTYG 4 cut(s) 248, 280, 1007, 1039
Asp700I GAANNNNTTC 1 cut(s) 308
AspLEI GCGC 1 cut(s) 1246
AspS9I GGNCC 2 cut(s) 679, 1312
AsuC2I CCSGG 1 cut(s) 329
AsuHPI GGTGA 4 cut(s) 581, 832, 1141, 1261
AvaII GGWCC 2 cut(s) 679, 1312
BaeGI GKGCMC 1 cut(s) 248
BalI TGGCCA 2 cut(s) 95, 1299
BanI GGYRCC 1 cut(s) 243
BauI CACGAG 1 cut(s) 146
Bbv12I GWGCWC 1 cut(s) 595
BbvCI CCTCAGC 2 cut(s) 383, 701
BbvI GCAGC 1 cut(s) 245
BccI CCATC 4 cut(s) 623, 629, 895, 1289
BceAI ACGGC 1 cut(s) 388
BcgI CGANNNNNNTGC 2 cut(s) 278, 312
BciT130I CCWGG 3 cut(s) 97, 301, 683
BclI TGATCA 2 cut(s) 822, 1027
BcnI CCSGG 1 cut(s) 329
BcoDI GTCTC 3 cut(s) 369, 1109, 1220
BfaI CTAG 2 cut(s) 1206, 1358
BfoI RGCGCY 1 cut(s) 1247
BglI GCCNNNNNGGC 1 cut(s) 488
BglII AGATCT 1 cut(s) 182
BisI GCNGC 2 cut(s) 234, 585
BlpI GCTNAGC 1 cut(s) 651
BlsI GCNGC 2 cut(s) 235, 586
Bme1390I CCNGG 4 cut(s) 97, 301, 329, 683
Bme18I GGWCC 2 cut(s) 679, 1312
BmeRI GACNNNNNGTC 1 cut(s) 1207
BmgBI CACGTC 1 cut(s) 727
BmgT120I GGNCC 2 cut(s) 679, 1312
BmiI GGNNCC 1 cut(s) 245
BmrFI CCNGG 4 cut(s) 97, 301, 329, 683
BmsI GCATC 2 cut(s) 1156, 1363
Bpu10I CCTNAGC 2 cut(s) 383, 701
Bpu1102I GCTNAGC 1 cut(s) 651
BpuEI CTTGAG 3 cut(s) 199, 365, 1259
BpuMI CCSGG 1 cut(s) 329
BsaI GGTCTC 1 cut(s) 369
BsaJI CCNNGG 1 cut(s) 806
BsaWI WCCGGW 1 cut(s) 731
BsaXI ACNNNNNCTCC 4 cut(s) 630, 660, 1142, 1172
Bsc4I CCNNNNNNNGG 2 cut(s) 812, 1321
Bse118I RCCGGY 3 cut(s) 378, 587, 1216
Bse3DI GCAATG 2 cut(s) 294, 498
BseAI TCCGGA 1 cut(s) 731
BseBI CCWGG 3 cut(s) 97, 301, 683
BseDI CCNNGG 1 cut(s) 806
BseGI GGATG 4 cut(s) 640, 906, 918, 1171
BseLI CCNNNNNNNGG 2 cut(s) 812, 1321
BseMI GCAATG 2 cut(s) 294, 498
BseMII CTCAG 6 cut(s) 12, 374, 642, 692, 857, 1187
BseRI GAGGAG 4 cut(s) 250, 362, 424, 910
BseSI GKGCMC 1 cut(s) 248
BseX3I CGGCCG 2 cut(s) 585, 1307
BseXI GCAGC 1 cut(s) 245
Bsh1236I CGCG 1 cut(s) 316
Bsh1285I CGRYCG 2 cut(s) 588, 1310
BshFI GGCC 7 cut(s) 95, 275, 482, 575, 587, 1299, 1309
BshNI GGYRCC 1 cut(s) 243
BsiEI CGRYCG 2 cut(s) 588, 1310
BsiHKAI GWGCWC 1 cut(s) 595
BsiSI CCGG 8 cut(s) 329, 379, 428, 588, 732, 980, 1217, 1310
BslFI GGGAC 3 cut(s) 354, 760, 1214
BslI CCNNNNNNNGG 2 cut(s) 812, 1321
BsmAI GTCTC 3 cut(s) 369, 1109, 1220
BsmFI GGGAC 3 cut(s) 354, 760, 1214
BsmI GAATGC 1 cut(s) 200
BsnI GGCC 7 cut(s) 95, 275, 482, 575, 587, 1299, 1309
Bso31I GGTCTC 1 cut(s) 369
Bsp1286I GDGCHC 2 cut(s) 248, 595
Bsp13I TCCGGA 1 cut(s) 731
Bsp143I GATC 7 cut(s) 36, 182, 609, 822, 868, 940, 1027
Bsp1720I GCTNAGC 1 cut(s) 651
Bsp19I CCATGG 1 cut(s) 806
BspACI CCGC 4 cut(s) 8, 314, 554, 584
BspANI GGCC 7 cut(s) 95, 275, 482, 575, 587, 1299, 1309
BspCNI CTCAG 6 cut(s) 13, 375, 643, 693, 856, 1188
BspEI TCCGGA 1 cut(s) 731
BspFNI CGCG 1 cut(s) 316
BspLI GGNNCC 1 cut(s) 245
BspPI GGATC 2 cut(s) 31, 876
BspQI GCTCTTC 1 cut(s) 795
BspT107I GGYRCC 1 cut(s) 243
BspTNI GGTCTC 1 cut(s) 369
BsrDI GCAATG 2 cut(s) 294, 498
BsrFI RCCGGY 3 cut(s) 378, 587, 1216
BssAI RCCGGY 3 cut(s) 378, 587, 1216
BssECI CCNNGG 1 cut(s) 806
BssMI GATC 7 cut(s) 36, 182, 609, 822, 868, 940, 1027
BssSI CACGAG 1 cut(s) 146
BssT1I CCWWGG 1 cut(s) 806
Bst2BI CACGAG 1 cut(s) 146
Bst2UI CCWGG 3 cut(s) 97, 301, 683
Bst4CI ACNGT 2 cut(s) 530, 1053
Bst6I CTCTTC 2 cut(s) 659, 795
BstAPI GCANNNNNTGC 1 cut(s) 359
BstC8I GCNNGC 1 cut(s) 698
BstDEI CTNAG 7 cut(s) 21, 383, 651, 701, 843, 872, 1196
BstDSI CCRYGG 1 cut(s) 806
BstF5I GGATG 4 cut(s) 640, 906, 918, 1171
BstFNI CGCG 1 cut(s) 316
BstH2I RGCGCY 1 cut(s) 1247
BstHHI GCGC 1 cut(s) 1246
BstKTI GATC 7 cut(s) 39, 185, 612, 825, 871, 943, 1030
BstMAI GTCTC 3 cut(s) 369, 1109, 1220
BstMBI GATC 7 cut(s) 36, 182, 609, 822, 868, 940, 1027
BstMCI CGRYCG 2 cut(s) 588, 1310
BstMWI GCNNNNNNNGC 7 cut(s) 148, 359, 488, 581, 590, 697, 882
BstNI CCWGG 3 cut(s) 97, 301, 683
BstSCI CCNGG 4 cut(s) 95, 299, 327, 681
BstSLI GKGCMC 1 cut(s) 248
BstUI CGCG 1 cut(s) 316
BstV1I GCAGC 1 cut(s) 245
BstX2I RGATCY 2 cut(s) 182, 868
BstXI CCANNNNNNTGG 1 cut(s) 103
BstYI RGATCY 2 cut(s) 182, 868
BstZI CGGCCG 2 cut(s) 585, 1307
BsuRI GGCC 7 cut(s) 95, 275, 482, 575, 587, 1299, 1309
BtgI CCRYGG 1 cut(s) 806
BtrI CACGTC 1 cut(s) 727
BtsCI GGATG 4 cut(s) 640, 906, 918, 1171
BtsI GCAGTG 1 cut(s) 1176
BtsIMutI CAGTG 3 cut(s) 665, 918, 1176
Cac8I GCNNGC 1 cut(s) 698
CfoI GCGC 1 cut(s) 1246
Cfr10I RCCGGY 3 cut(s) 378, 587, 1216
Cfr13I GGNCC 2 cut(s) 679, 1312
CsiI ACCWGGT 1 cut(s) 681
Csp6I GTAC 2 cut(s) 325, 1159
CviAII CATG 7 cut(s) 91, 190, 605, 739, 807, 1018, 1321
CviQI GTAC 2 cut(s) 325, 1159
DdeI CTNAG 7 cut(s) 21, 383, 651, 701, 843, 872, 1196
DpnI GATC 7 cut(s) 38, 184, 611, 824, 870, 942, 1029
DpnII GATC 7 cut(s) 36, 182, 609, 822, 868, 940, 1027
DriI GACNNNNNGTC 1 cut(s) 1207
EaeI YGGCCR 4 cut(s) 93, 585, 1297, 1307
EagI CGGCCG 2 cut(s) 585, 1307
Eam1104I CTCTTC 2 cut(s) 659, 795
Eam1105I GACNNNNNGTC 1 cut(s) 1207
EarI CTCTTC 2 cut(s) 659, 795
EciI GGCGGA 2 cut(s) 23, 569
EclXI CGGCCG 2 cut(s) 585, 1307
Eco130I CCWWGG 1 cut(s) 806
Eco31I GGTCTC 1 cut(s) 369
Eco47I GGWCC 2 cut(s) 679, 1312
Eco52I CGGCCG 2 cut(s) 585, 1307
Eco57I CTGAAG 2 cut(s) 641, 1020
EcoO109I RGGNCCY 1 cut(s) 679
EcoRI GAATTC 1 cut(s) 457
EcoRII CCWGG 3 cut(s) 95, 299, 681
EcoT14I CCWWGG 1 cut(s) 806
ErhI CCWWGG 1 cut(s) 806
FaeI CATG 7 cut(s) 94, 193, 608, 742, 810, 1021, 1324
FalI AAGNNNNNCTT 2 cut(s) 1268, 1300
FaqI GGGAC 3 cut(s) 354, 760, 1214
FatI CATG 7 cut(s) 90, 189, 604, 738, 806, 1017, 1320
FauI CCCGC 1 cut(s) 321
FbaI TGATCA 2 cut(s) 822, 1027
FblI GTMKAC 1 cut(s) 1211
Fnu4HI GCNGC 2 cut(s) 234, 585
FokI GGATG 4 cut(s) 647, 913, 925, 1178
Fsp4HI GCNGC 2 cut(s) 234, 585
FspBI CTAG 2 cut(s) 1206, 1358
GlaI GCGC 1 cut(s) 1245
GluI GCNGC 2 cut(s) 234, 585
HaeII RGCGCY 1 cut(s) 1247
HaeIII GGCC 7 cut(s) 95, 275, 482, 575, 587, 1299, 1309
HapII CCGG 8 cut(s) 329, 379, 428, 588, 732, 980, 1217, 1310
HhaI GCGC 1 cut(s) 1246
Hin1II CATG 7 cut(s) 94, 193, 608, 742, 810, 1021, 1324
Hin6I GCGC 1 cut(s) 1244
HinP1I GCGC 1 cut(s) 1244
HinfI GANTC 9 cut(s) 81, 125, 257, 748, 856, 946, 1192, 1202, 1267
HpaII CCGG 8 cut(s) 329, 379, 428, 588, 732, 980, 1217, 1310
HphI GGTGA 4 cut(s) 581, 832, 1141, 1261
Hpy166II GTNNAC 1 cut(s) 1212
Hpy188I TCNGA 8 cut(s) 41, 160, 187, 624, 790, 837, 945, 1197
Hpy188III TCNNGA 2 cut(s) 146, 732
Hpy8I GTNNAC 1 cut(s) 1212
HpyAV CCTTC 8 cut(s) 94, 258, 274, 298, 382, 517, 560, 737
HpyCH4III ACNGT 2 cut(s) 530, 1053
HpyCH4IV ACGT 1 cut(s) 726
HpyCH4V TGCA 2 cut(s) 850, 1169
HpyF10VI GCNNNNNNNGC 7 cut(s) 148, 359, 488, 581, 590, 697, 882
HpyF3I CTNAG 7 cut(s) 21, 383, 651, 701, 843, 872, 1196
HpySE526I ACGT 1 cut(s) 726
Hsp92II CATG 7 cut(s) 94, 193, 608, 742, 810, 1021, 1324
HspAI GCGC 1 cut(s) 1244
Kpn2I TCCGGA 1 cut(s) 731
Ksp22I TGATCA 2 cut(s) 822, 1027
Kzo9I GATC 7 cut(s) 36, 182, 609, 822, 868, 940, 1027
LguI GCTCTTC 1 cut(s) 795
LmnI GCTCC 3 cut(s) 688, 881, 982
Lsp1109I GCAGC 1 cut(s) 245
LweI GCATC 2 cut(s) 1156, 1363
MabI ACCWGGT 1 cut(s) 681
MaeI CTAG 2 cut(s) 1206, 1358
MaeII ACGT 1 cut(s) 726
MaeIII GTNAC 2 cut(s) 722, 1219
MalI GATC 7 cut(s) 38, 184, 611, 824, 870, 942, 1029
MboI GATC 7 cut(s) 36, 182, 609, 822, 868, 940, 1027
MboII GAAGA 3 cut(s) 214, 676, 812
MflI RGATCY 2 cut(s) 182, 868
MhlI GDGCHC 2 cut(s) 248, 595
MlsI TGGCCA 2 cut(s) 95, 1299
MluCI AATT 8 cut(s) 65, 130, 320, 422, 457, 706, 791, 1302
MluNI TGGCCA 2 cut(s) 95, 1299
MlyI GAGTC 4 cut(s) 119, 251, 742, 1196
Mox20I TGGCCA 2 cut(s) 95, 1299
MroI TCCGGA 1 cut(s) 731
MroXI GAANNNNTTC 1 cut(s) 308
MscI TGGCCA 2 cut(s) 95, 1299
MseI TTAA 1 cut(s) 1372
MslI CAYNNNNRTG 1 cut(s) 1083
Msp20I TGGCCA 2 cut(s) 95, 1299
MspI CCGG 8 cut(s) 329, 379, 428, 588, 732, 980, 1217, 1310
MspR9I CCNGG 4 cut(s) 97, 301, 329, 683
Mva1269I GAATGC 1 cut(s) 200
MvaI CCWGG 3 cut(s) 97, 301, 683
MvnI CGCG 1 cut(s) 316
MwoI GCNNNNNNNGC 7 cut(s) 148, 359, 488, 581, 590, 697, 882
NciI CCSGG 1 cut(s) 329
NcoI CCATGG 1 cut(s) 806
NdeII GATC 7 cut(s) 36, 182, 609, 822, 868, 940, 1027
NlaIII CATG 7 cut(s) 94, 193, 608, 742, 810, 1021, 1324
NlaIV GGNNCC 1 cut(s) 245
NmeAIII GCCGAG 1 cut(s) 196
NmuCI GTSAC 1 cut(s) 722
PciSI GCTCTTC 1 cut(s) 795
PctI GAATGC 1 cut(s) 200
PdmI GAANNNNTTC 1 cut(s) 308
PfeI GAWTC 5 cut(s) 81, 856, 946, 1192, 1267
PkrI GCNGC 2 cut(s) 235, 586
PleI GAGTC 4 cut(s) 119, 251, 742, 1196
PpsI GAGTC 4 cut(s) 119, 251, 742, 1196
PpuMI RGGWCCY 1 cut(s) 679
Psp5II RGGWCCY 1 cut(s) 679
Psp6I CCWGG 3 cut(s) 95, 299, 681
PspGI CCWGG 3 cut(s) 95, 299, 681
PspN4I GGNNCC 1 cut(s) 245
PspPI GGNCC 2 cut(s) 679, 1312
PspPPI RGGWCCY 1 cut(s) 679
PsuI RGATCY 2 cut(s) 182, 868
RsaI GTAC 2 cut(s) 326, 1160
RsaNI GTAC 2 cut(s) 325, 1159
RseI CAYNNNNRTG 1 cut(s) 1083
SapI GCTCTTC 1 cut(s) 795
SaqAI TTAA 1 cut(s) 1372
SatI GCNGC 2 cut(s) 234, 585
Sau3AI GATC 7 cut(s) 36, 182, 609, 822, 868, 940, 1027
Sau96I GGNCC 2 cut(s) 679, 1312
SchI GAGTC 4 cut(s) 119, 251, 742, 1196
ScrFI CCNGG 4 cut(s) 97, 301, 329, 683
SduI GDGCHC 2 cut(s) 248, 595
SexAI ACCWGGT 1 cut(s) 681
SfaNI GCATC 2 cut(s) 1156, 1363
SinI GGWCC 2 cut(s) 679, 1312
SmiMI CAYNNNNRTG 1 cut(s) 1083
SmlI CTYRAG 3 cut(s) 178, 344, 1274
SmoI CTYRAG 3 cut(s) 178, 344, 1274
Sse9I AATT 8 cut(s) 65, 130, 320, 422, 457, 706, 791, 1302
SsiI CCGC 4 cut(s) 8, 314, 554, 584
SspI AATATT 1 cut(s) 548
SspMI CTAG 2 cut(s) 1206, 1358
StyD4I CCNGG 4 cut(s) 95, 299, 327, 681
StyI CCWWGG 1 cut(s) 806
TaaI ACNGT 2 cut(s) 530, 1053
TaiI ACGT 1 cut(s) 729
TaqI TCGA 2 cut(s) 255, 267
TasI AATT 8 cut(s) 65, 130, 320, 422, 457, 706, 791, 1302
TauI GCSGC 1 cut(s) 587
TfiI GAWTC 5 cut(s) 81, 856, 946, 1192, 1267
Tru1I TTAA 1 cut(s) 1372
Tru9I TTAA 1 cut(s) 1372
TscAI CASTG 3 cut(s) 665, 925, 1176
TseFI GTSAC 1 cut(s) 722
TseI GCWGC 1 cut(s) 233
Tsp45I GTSAC 1 cut(s) 722
TspDTI ATGAA 4 cut(s) 90, 505, 509, 929
TspGWI ACGGA 2 cut(s) 29, 1238
TspRI CASTG 3 cut(s) 665, 925, 1176
VpaK11BI GGWCC 2 cut(s) 679, 1312
XapI RAATTY 2 cut(s) 457, 1302
XmiI GTMKAC 1 cut(s) 1211
XmnI GAANNNNTTC 1 cut(s) 308
XspI CTAG 2 cut(s) 1206, 1358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.