Rh7DG440100

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000255
Physical Location & Seq
Reverse (-)
62569968 .. 62571346
1379 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG440100.1

Sequence Viewer

Length: 1290 bp
ATGGAGAGGGTGAAACTAGAAAAGGAAAAAGCCAGCATGGCGAGGAAAGAGAAGAAGATCGCCGCCGCCGGGAAGGCTTTTTTCCGGTACGACTTTGACCCGGATTACCAGTTCTTGCACAACTGGGTCTCGGATCTTTTCGCCGAGTGCCTGAAATCCGATCTCAACAATTTGAAGACTAGACAGTACAAGAAGATAAGCCTTGCAGCCAAGTGGTGTCCTTCGCTGGACTCCTCATTCGACAAAGCCACTCTACTATGTGAAAACATTGCCAGGAGGGTTTTCCAGCGAGAATCGTCGTTGGAATATAAAGGAATTGAGGATGCTCATTATGCTTACAGAGTCAGAGACCGGCTGAGGAAGGAGGTTTTGGTCCCACTGAGGAAGGTTATGGAATTACCAGAGCATGATAAGGAGCGGTTCATCCAATACTTGGAGGACGTGAGAGAAGGCAAGGCCACTATTGCGGCTGGTGCATTGCTTCCTCATGAGGTTATAAAGTCTCTGGATGACGACGACGACGGTGGGCTGGTGAGTGAGCTTCAGTGGAAGAGGATGTTGGATGATTTGTCAAAGCTAGGGAAGCTCACGAATTGCTTGGCTGTGTGTGACGTGTCGGGGAGTATGAATGGGACTCCTATGGAGGTGTCTGTTGCTTTGGGGATGGTGGTGGCTGAATTGAGCGAAGAGCAGTGGAAAGGGAAGGTGATCACTTTCAGTAGCAATCCTCAGCTGCATGTGATACAAGGCAAGAGTCTCAAGGCCAAGAGCGAGTTTGTGAGGAAAATGGATTGGGGAGCCAACACTGATTTTCAGAAGGTGTTTAATTTGATACTAGAAGTGGCTGTGAAGGGGAAGCTGAAGCCAGAGCAGATGATAAAGAAGGTGTTTGTGTTCAGCGACATGGAATTTGATCAGGCTTCGCTGCATAGCAGATATGGATTTGGGTATGGAAGGGGGGTTAGGGGGCGCGGGAGATGTGGATTTGGGAATTATGGTAGGGAGAATATTGAAACTCAAAAGGGATGGGAGACTGATTATGAGGTGATACAAAGGAAGTTTAGGGAGAGAGGGTATGGGGATGTGGTGCCACAGATAGTGTTTTGGAATTTGAGGCACTCCAAATCTACACCGGTGACCGAGTCACAAAATGGGGTGGCGCTGCTCAGTGGCTTCTCCAAGAATTTGCTGAAGTTGTTCTTGGGTAAGGATGTGGTGACTCGCCCGGACCAAACCATGGAAGAGGCCATCCCTGGCAAAGAGTATCAGAATTTAGTTGTAGTGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

429

Amino Acids

49.03

Weight (kDa)

8.75

Isoelectric Point (pI)

26.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 4 - 136 8.4e-43 Domain of unknown function (DUF2828)
DUF2828 PF11443 135 - 196 3.3e-15 Domain of unknown function (DUF2828)
DUF7788 PF25043 198 - 416 4.7e-78 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 497
AccB1I GGYRCC 1 cut(s) 1087
AccB7I CCANNNNNTGG 2 cut(s) 433, 1237
AccBSI CCGCTC 1 cut(s) 418
AccII CGCG 1 cut(s) 972
AciI CCGC 5 cut(s) 63, 66, 418, 467, 972
AclWI GGATC 1 cut(s) 141
AcsI RAATTY 4 cut(s) 908, 1108, 1183, 1270
AcuI CTGAAG 3 cut(s) 527, 881, 1211
AfaI GTAC 2 cut(s) 89, 188
AfiI CCNNNNNNNGG 3 cut(s) 69, 433, 1237
AflIII ACRYGT 1 cut(s) 612
AgeI ACCGGT 1 cut(s) 1132
AgsI TTSAA 2 cut(s) 175, 1013
AjiI CACGTC 2 cut(s) 442, 613
AjnI CCWGG 2 cut(s) 272, 1252
AjuI GAANNNNNNNTTGG 6 cut(s) 353, 385, 542, 574, 1184, 1216
AloI GAACNNNNNNTCC 2 cut(s) 95, 127
AluBI AGCT 5 cut(s) 541, 577, 586, 733, 859
AluI AGCT 5 cut(s) 541, 577, 586, 733, 859
Alw26I GTCTC 5 cut(s) 133, 342, 507, 761, 1025
AlwI GGATC 1 cut(s) 141
AoxI GGCC 3 cut(s) 456, 762, 1245
ApeKI GCWGC 4 cut(s) 206, 733, 925, 1162
ApoI RAATTY 4 cut(s) 908, 1108, 1183, 1270
ArsI GACNNNNNNTTYG 4 cut(s) 221, 253, 893, 925
AsiGI ACCGGT 1 cut(s) 1132
Asp700I GAANNNNTTC 1 cut(s) 1196
AspLEI GCGC 2 cut(s) 972, 1162
AspS9I GGNCC 2 cut(s) 373, 1228
AsuC2I CCSGG 3 cut(s) 70, 101, 1226
AsuHPI GGTGA 6 cut(s) 22, 544, 718, 1057, 1147, 1228
AvaII GGWCC 2 cut(s) 373, 1228
BanI GGYRCC 1 cut(s) 1087
BbsI GAAGAC 1 cut(s) 182
BbvCI CCTCAGC 2 cut(s) 356, 729
BbvI GCAGC 4 cut(s) 218, 720, 912, 1149
BccI CCATC 3 cut(s) 658, 1020, 1256
BciT130I CCWGG 2 cut(s) 274, 1254
BclI TGATCA 2 cut(s) 708, 913
BcnI CCSGG 3 cut(s) 70, 101, 1226
BcoDI GTCTC 5 cut(s) 133, 342, 507, 761, 1025
BfaI CTAG 4 cut(s) 17, 180, 578, 836
BfoI RGCGCY 1 cut(s) 1163
BglI GCCNNNNNGGC 2 cut(s) 38, 74
BisI GCNGC 7 cut(s) 63, 66, 207, 468, 734, 926, 1163
BlsI GCNGC 7 cut(s) 64, 67, 208, 469, 735, 927, 1164
Bme1390I CCNGG 5 cut(s) 70, 101, 274, 1226, 1254
Bme18I GGWCC 2 cut(s) 373, 1228
BmgBI CACGTC 2 cut(s) 442, 613
BmgT120I GGNCC 2 cut(s) 373, 1228
BmiI GGNNCC 3 cut(s) 375, 799, 1089
BmrFI CCNGG 5 cut(s) 70, 101, 274, 1226, 1254
BmrI ACTGGG 1 cut(s) 133
BmsI GCATC 1 cut(s) 313
BmuI ACTGGG 1 cut(s) 133
BpiI GAAGAC 1 cut(s) 182
Bpu10I CCTNAGC 2 cut(s) 356, 729
BpuEI CTTGAG 1 cut(s) 743
BpuMI CCSGG 3 cut(s) 70, 101, 1226
BsaI GGTCTC 2 cut(s) 133, 342
BsaJI CCNNGG 2 cut(s) 1236, 1252
BsaWI WCCGGW 2 cut(s) 84, 1132
BsaXI ACNNNNNCTCC 2 cut(s) 1058, 1088
Bsc4I CCNNNNNNNGG 3 cut(s) 69, 433, 1237
Bse118I RCCGGY 2 cut(s) 351, 1132
Bse1I ACTGG 2 cut(s) 109, 128
Bse3DI GCAATG 2 cut(s) 267, 476
BseBI CCWGG 2 cut(s) 274, 1254
BseDI CCNNGG 2 cut(s) 1236, 1252
BseLI CCNNNNNNNGG 3 cut(s) 69, 433, 1237
BseMI GCAATG 2 cut(s) 267, 476
BseMII CTCAG 4 cut(s) 347, 371, 743, 1180
BseNI ACTGG 2 cut(s) 109, 128
BseRI GAGGAG 1 cut(s) 223
BseXI GCAGC 4 cut(s) 218, 720, 912, 1149
Bsh1236I CGCG 1 cut(s) 972
BshFI GGCC 3 cut(s) 458, 764, 1247
BshNI GGYRCC 1 cut(s) 1087
BshTI ACCGGT 1 cut(s) 1132
BsiSI CCGG 6 cut(s) 69, 85, 101, 352, 1133, 1226
BslFI GGGAC 2 cut(s) 359, 646
BslI CCNNNNNNNGG 3 cut(s) 69, 433, 1237
BsmAI GTCTC 5 cut(s) 133, 342, 507, 761, 1025
BsmFI GGGAC 2 cut(s) 359, 646
BsnI GGCC 3 cut(s) 458, 764, 1247
Bso31I GGTCTC 2 cut(s) 133, 342
Bsp143I GATC 5 cut(s) 57, 133, 160, 708, 913
Bsp19I CCATGG 1 cut(s) 1236
BspACI CCGC 5 cut(s) 63, 66, 418, 467, 972
BspANI GGCC 3 cut(s) 458, 764, 1247
BspCNI CTCAG 4 cut(s) 348, 372, 742, 1179
BspFNI CGCG 1 cut(s) 972
BspHI TCATGA 1 cut(s) 487
BspLI GGNNCC 3 cut(s) 375, 799, 1089
BspPI GGATC 1 cut(s) 141
BspQI GCTCTTC 1 cut(s) 681
BspT107I GGYRCC 1 cut(s) 1087
BspTNI GGTCTC 2 cut(s) 133, 342
BsrBI CCGCTC 1 cut(s) 418
BsrDI GCAATG 2 cut(s) 267, 476
BsrFI RCCGGY 2 cut(s) 351, 1132
BsrI ACTGG 2 cut(s) 109, 128
BssAI RCCGGY 2 cut(s) 351, 1132
BssECI CCNNGG 2 cut(s) 1236, 1252
BssMI GATC 5 cut(s) 57, 133, 160, 708, 913
BssT1I CCWWGG 1 cut(s) 1236
Bst2UI CCWGG 2 cut(s) 274, 1254
Bst4CI ACNGT 2 cut(s) 186, 524
Bst6I CTCTTC 3 cut(s) 545, 681, 1236
BstC8I GCNNGC 1 cut(s) 34
BstDEI CTNAG 4 cut(s) 356, 380, 729, 1166
BstDSI CCRYGG 1 cut(s) 1236
BstEII GGTNACC 1 cut(s) 1135
BstFNI CGCG 1 cut(s) 972
BstH2I RGCGCY 1 cut(s) 1163
BstHHI GCGC 2 cut(s) 972, 1162
BstKTI GATC 5 cut(s) 60, 136, 163, 711, 916
BstMAI GTCTC 5 cut(s) 133, 342, 507, 761, 1025
BstMBI GATC 5 cut(s) 57, 133, 160, 708, 913
BstMWI GCNNNNNNNGC 6 cut(s) 38, 74, 332, 464, 473, 583
BstNI CCWGG 2 cut(s) 274, 1254
BstNSI RCATGY 1 cut(s) 740
BstPI GGTNACC 1 cut(s) 1135
BstSCI CCNGG 5 cut(s) 68, 99, 272, 1224, 1252
BstUI CGCG 1 cut(s) 972
BstV1I GCAGC 4 cut(s) 218, 720, 912, 1149
BstV2I GAAGAC 1 cut(s) 182
BstX2I RGATCY 1 cut(s) 133
BstYI RGATCY 1 cut(s) 133
BsuRI GGCC 3 cut(s) 458, 764, 1247
BtgI CCRYGG 1 cut(s) 1236
BtrI CACGTC 2 cut(s) 442, 613
BtsI GCAGTG 1 cut(s) 698
BtsIMutI CAGTG 5 cut(s) 377, 551, 698, 804, 1174
Cac8I GCNNGC 1 cut(s) 34
CciI TCATGA 1 cut(s) 487
CfoI GCGC 2 cut(s) 972, 1162
Cfr10I RCCGGY 2 cut(s) 351, 1132
Cfr13I GGNCC 2 cut(s) 373, 1228
Csp6I GTAC 2 cut(s) 88, 187
CspAI ACCGGT 1 cut(s) 1132
CviAII CATG 6 cut(s) 37, 407, 488, 737, 904, 1237
CviQI GTAC 2 cut(s) 88, 187
DdeI CTNAG 4 cut(s) 356, 380, 729, 1166
DpnI GATC 5 cut(s) 59, 135, 162, 710, 915
DpnII GATC 5 cut(s) 57, 133, 160, 708, 913
Eam1104I CTCTTC 3 cut(s) 545, 681, 1236
EarI CTCTTC 3 cut(s) 545, 681, 1236
Eco130I CCWWGG 1 cut(s) 1236
Eco31I GGTCTC 2 cut(s) 133, 342
Eco47I GGWCC 2 cut(s) 373, 1228
Eco57I CTGAAG 3 cut(s) 527, 881, 1211
Eco91I GGTNACC 1 cut(s) 1135
EcoO65I GGTNACC 1 cut(s) 1135
EcoRII CCWGG 2 cut(s) 272, 1252
EcoT14I CCWWGG 1 cut(s) 1236
ErhI CCWWGG 1 cut(s) 1236
FaeI CATG 6 cut(s) 40, 410, 491, 740, 907, 1240
FalI AAGNNNNNCTT 2 cut(s) 1184, 1216
FaqI GGGAC 2 cut(s) 359, 646
FatI CATG 6 cut(s) 36, 406, 487, 736, 903, 1236
FauI CCCGC 1 cut(s) 965
FbaI TGATCA 2 cut(s) 708, 913
Fnu4HI GCNGC 7 cut(s) 63, 66, 207, 468, 734, 926, 1163
Fsp4HI GCNGC 7 cut(s) 63, 66, 207, 468, 734, 926, 1163
FspBI CTAG 4 cut(s) 17, 180, 578, 836
GlaI GCGC 2 cut(s) 971, 1161
GluI GCNGC 7 cut(s) 63, 66, 207, 468, 734, 926, 1163
HaeII RGCGCY 1 cut(s) 1163
HaeIII GGCC 3 cut(s) 458, 764, 1247
HapII CCGG 6 cut(s) 69, 85, 101, 352, 1133, 1226
HhaI GCGC 2 cut(s) 972, 1162
Hin1II CATG 6 cut(s) 40, 410, 491, 740, 907, 1240
Hin6I GCGC 2 cut(s) 970, 1160
HinP1I GCGC 2 cut(s) 970, 1160
HinfI GANTC 7 cut(s) 230, 293, 342, 634, 754, 1142, 1219
HpaII CCGG 6 cut(s) 69, 85, 101, 352, 1133, 1226
HphI GGTGA 6 cut(s) 22, 544, 718, 1057, 1147, 1228
Hpy188I TCNGA 5 cut(s) 133, 160, 347, 816, 1269
Hpy188III TCNNGA 3 cut(s) 488, 506, 589
Hpy99I CGWCG 4 cut(s) 301, 518, 521, 524
HpyCH4III ACNGT 2 cut(s) 186, 524
HpyCH4IV ACGT 2 cut(s) 441, 612
HpyCH4V TGCA 5 cut(s) 118, 206, 476, 736, 928
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 74, 332, 464, 473, 583
HpyF3I CTNAG 4 cut(s) 356, 380, 729, 1166
HpySE526I ACGT 2 cut(s) 441, 612
Hsp92II CATG 6 cut(s) 40, 410, 491, 740, 907, 1240
HspAI GCGC 2 cut(s) 970, 1160
Ksp22I TGATCA 2 cut(s) 708, 913
Kzo9I GATC 5 cut(s) 57, 133, 160, 708, 913
LguI GCTCTTC 1 cut(s) 681
LmnI GCTCC 2 cut(s) 415, 797
Lsp1109I GCAGC 4 cut(s) 218, 720, 912, 1149
LweI GCATC 1 cut(s) 313
MaeI CTAG 4 cut(s) 17, 180, 578, 836
MaeII ACGT 2 cut(s) 441, 612
MaeIII GTNAC 4 cut(s) 608, 1135, 1143, 1216
MalI GATC 5 cut(s) 59, 135, 162, 710, 915
MbiI CCGCTC 1 cut(s) 418
MboI GATC 5 cut(s) 57, 133, 160, 708, 913
MboII GAAGA 7 cut(s) 64, 67, 187, 205, 562, 698, 1253
MflI RGATCY 1 cut(s) 133
MlyI GAGTC 6 cut(s) 224, 351, 628, 763, 1151, 1213
MmeI TCCRAC 2 cut(s) 282, 540
MroXI GAANNNNTTC 1 cut(s) 1196
MseI TTAA 1 cut(s) 825
MspA1I CMGCKG 1 cut(s) 733
MspI CCGG 6 cut(s) 69, 85, 101, 352, 1133, 1226
MspR9I CCNGG 5 cut(s) 70, 101, 274, 1226, 1254
MvaI CCWGG 2 cut(s) 274, 1254
MvnI CGCG 1 cut(s) 972
MwoI GCNNNNNNNGC 6 cut(s) 38, 74, 332, 464, 473, 583
NciI CCSGG 3 cut(s) 70, 101, 1226
NcoI CCATGG 1 cut(s) 1236
NdeII GATC 5 cut(s) 57, 133, 160, 708, 913
NlaIII CATG 6 cut(s) 40, 410, 491, 740, 907, 1240
NlaIV GGNNCC 3 cut(s) 375, 799, 1089
NmeAIII GCCGAG 1 cut(s) 169
NmuCI GTSAC 4 cut(s) 608, 1135, 1143, 1216
NspI RCATGY 1 cut(s) 740
PagI TCATGA 1 cut(s) 487
PciSI GCTCTTC 1 cut(s) 681
PdmI GAANNNNTTC 1 cut(s) 1196
PfeI GAWTC 1 cut(s) 293
PflFI GACNNNGTC 1 cut(s) 1141
PflMI CCANNNNNTGG 2 cut(s) 433, 1237
PinAI ACCGGT 1 cut(s) 1132
PkrI GCNGC 7 cut(s) 64, 67, 208, 469, 735, 927, 1164
PleI GAGTC 6 cut(s) 224, 350, 628, 762, 1150, 1213
PpsI GAGTC 6 cut(s) 224, 350, 628, 762, 1150, 1213
PsiI TTATAA 1 cut(s) 497
Psp6I CCWGG 2 cut(s) 272, 1252
PspEI GGTNACC 1 cut(s) 1135
PspGI CCWGG 2 cut(s) 272, 1252
PspN4I GGNNCC 3 cut(s) 375, 799, 1089
PspPI GGNCC 2 cut(s) 373, 1228
PsuI RGATCY 1 cut(s) 133
PsyI GACNNNGTC 1 cut(s) 1141
PvuII CAGCTG 1 cut(s) 733
RsaI GTAC 2 cut(s) 89, 188
RsaNI GTAC 2 cut(s) 88, 187
SapI GCTCTTC 1 cut(s) 681
SaqAI TTAA 1 cut(s) 825
SatI GCNGC 7 cut(s) 63, 66, 207, 468, 734, 926, 1163
Sau3AI GATC 5 cut(s) 57, 133, 160, 708, 913
Sau96I GGNCC 2 cut(s) 373, 1228
SchI GAGTC 6 cut(s) 224, 351, 628, 763, 1151, 1213
ScrFI CCNGG 5 cut(s) 70, 101, 274, 1226, 1254
SfaNI GCATC 1 cut(s) 313
SgrAI CRCCGGYG 1 cut(s) 1132
SinI GGWCC 2 cut(s) 373, 1228
SmlI CTYRAG 1 cut(s) 758
SmoI CTYRAG 1 cut(s) 758
SsiI CCGC 5 cut(s) 63, 66, 418, 467, 972
SspI AATATT 1 cut(s) 1009
SspMI CTAG 4 cut(s) 17, 180, 578, 836
StyD4I CCNGG 5 cut(s) 68, 99, 272, 1224, 1252
StyI CCWWGG 1 cut(s) 1236
TaaI ACNGT 2 cut(s) 186, 524
TaiI ACGT 2 cut(s) 444, 615
TaqI TCGA 1 cut(s) 240
TaqII GACCGA 1 cut(s) 1154
TatI WGTACW 1 cut(s) 186
TauI GCSGC 3 cut(s) 65, 68, 470
TfiI GAWTC 1 cut(s) 293
Tru1I TTAA 1 cut(s) 825
Tru9I TTAA 1 cut(s) 825
TscAI CASTG 5 cut(s) 384, 551, 698, 811, 1174
TseFI GTSAC 4 cut(s) 608, 1135, 1143, 1216
TseI GCWGC 4 cut(s) 206, 733, 925, 1162
Tsp45I GTSAC 4 cut(s) 608, 1135, 1143, 1216
TspDTI ATGAA 2 cut(s) 412, 641
TspRI CASTG 5 cut(s) 384, 551, 698, 811, 1174
Tth111I GACNNNGTC 1 cut(s) 1141
Van91I CCANNNNNTGG 2 cut(s) 433, 1237
VpaK11BI GGWCC 2 cut(s) 373, 1228
XapI RAATTY 4 cut(s) 908, 1108, 1183, 1270
XceI RCATGY 1 cut(s) 740
XmnI GAANNNNTTC 1 cut(s) 1196
XspI CTAG 4 cut(s) 17, 180, 578, 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.