Rw7G005860

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000255
Physical Location & Seq
Reverse (-)
4910851 .. 4913444
2594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G005860.1

Sequence Viewer

Length: 2019 bp
ATGAAGCCACAAATCCTCTCAATTCTCAAAGGCGCCAAACCAAACCAAAACCATGTCAACTTGGCAAGAACCCAAACTCCTACTCTTCTTCTCGGTCCTCCAGAGATCGGAACAGTACCCACCACCAATGCTCCACCACAAGTCAATTACGGCGACCCCTTCATGGATCTCATGGTCTCCAATTACAACAACACCACGTCAACTTCCCCCCGACCCCCAATGGGTTTGACCGAGAACAGTTCGCCTACTTTTCTCACCTCCGGCAACCCCTGCCTTGATTTTTTCTTCCACGTGGTGCCTGACACCAAGCCTGAATATTTCAACCAACAGCTCCCATTGGCTTGGTCCAACGATGCCGTAACCGCCCTCAAGCTCATCTGCAACCTGCGAGGTGTACGTGGCACCGGAAAGTGTGACAAAGAAGGGTTCTACACAGCAGCGTATTGGCTCTACAACCACCACCCTAAAACCCTAGCTTACAATGTAGCGTCGGTTGCCGCTTTTGGGTATTTCAAAGATCTGCCGGAGATTCTATACCGCCTTCTAGAAGGCCAAGACATCAGGAAGACCCAAAAGGAAGAGTGGGAAAGGATCAAGCGCTATTTCTATAAGGGGCCGGGTAAGGTAGACGGGTTAAGGTCACTAAAGCTCGGGCATTTAATGGGTCGGGCGGATCATCCACCTAGAGATATGATCCGATTGAAAAAAGAAAAAGTCAGGGAATTGAGGTATGAAAGAATCTATGACATGGCCAGGAAGGTGGTTTCCAAGTATCAGCAAGACTCCAATTTTCAGTTGCTTCACGAGCAGATTTCTGATGTTTTCGCCGAGTGCTTGAGATCTGACATGGAATGCTTGAAGAAGCACCAGAGAAACAAGATAAGCCTCGCAGCGAAATGGTGCCCTTCCCTCGACTCCTCCTTCGACAAGGCCACTTTGCTCTGCGAAAGCATTGCCAGGAAGGTTTTCCCGCGTGAATTGTACCCGGAGTATCAGGGACTTGAGGAGGCACACTATGCTTACAGAGTGAGAGACCGGCTGAGGAAGGAGGTTTATGTGCCGTTGAGGAGGGCATTGGAATTGCCGGAACTTTATATGACTGACAGAGAGTGGAATTCACTTCCTTACAACAGGGTGGCCTCTGTGGCAATGAAGCTCTACAAACATAGGTTCATTGAGAAGGACTGTGAGAGGTTTGAAAAATATTTGGCGGAAGTGAAAGAAGGTGAGGCCAAGATTGCGGCCGGTGCTCTGCTTCCACATGAGATCATAGCCTCTCTGAATGATGGGGATGGAGGGCAAGTGGCTGAGCTTCAGTGGAAGAGAATGGTGGAGGACCTGGTGGAGCTTGGCAAGCTGAGGAATTGCTTGGCTGTGTGTGACGTATCCGGAAGCATGGAAGGGACTCCTATGGAGGTGTGTGTGGCTTTGGGTCTGTTGGTGTCGGAATTGAGTGAAGAGCCATGGAAAGGAAAGGTGATCACTTTCAGTCAGAACCCTCAGTTGCATTTGATTCAAGGCGAGGATCTTAGCTCCAAGTGCGAGTTTGTGAGGAGGATGGAATGGGGGATGAACACTGATTTTCAAAAGGTGTTTGATCTGATTCTCCAAGTGGCCGCTGTGAATGGGAACTTGAAGCCGGAGCAAATGATAAAGAGGGTGTTTGTGTTTAGCGACATGGAGTTTGATCAGGCTTCAGGGCATATATCACAGTTCTATGAGAGTTATTGGGGGAAAAGGGAGAAAAGCAATAGTTGGGAGACTGATTATGAGGTGATACAGAGGAAGTTTAGGGAGAAAGGGTACGGGGATGCAGTGCCACAGATAGTGTTTTGGAATCTGAGGGACTCTAGGTCTACGCCGGTAACGGAGACACAAAATGGAGTGGCGCTGGTGAGTGGCTTCTCCAAGAATCTACTCAAGCTGTTCTTGGACAATGATGGCCAAATTCGGCCGGACCTTATCATGGAAAAAGCTATCTCTGGGAAAGAGTATCAGCATCTAGTTGTTGTGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

672

Amino Acids

77.2

Weight (kDa)

7.85

Isoelectric Point (pI)

34.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 77 - 453 3.7e-128 Domain of unknown function (DUF2828)
DUF7788 PF25043 455 - 650 4.6e-82 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 393
AccB1I GGYRCC 4 cut(s) 32, 295, 401, 900
AccI GTMKAC 2 cut(s) 627, 1856
AccII CGCG 1 cut(s) 973
AccIII TCCGGA 1 cut(s) 1388
AciI CCGC 8 cut(s) 363, 498, 538, 671, 971, 1211, 1241, 1617
AclWI GGATC 5 cut(s) 174, 599, 681, 688, 1533
AcoI YGGCCR 5 cut(s) 750, 1242, 1614, 1942, 1952
AcsI RAATTY 2 cut(s) 1114, 1947
AcuI CTGAAG 2 cut(s) 1298, 1680
AcvI CACGTG 1 cut(s) 292
AcyI GRCGYC 1 cut(s) 33
AdeI CACNNNGTG 1 cut(s) 295
AfaI GTAC 4 cut(s) 117, 396, 983, 1805
AfeI AGCGCT 1 cut(s) 599
AfiI CCNNNNNNNGG 6 cut(s) 107, 163, 221, 504, 1469, 1966
AgsI TTSAA 8 cut(s) 322, 514, 703, 859, 1199, 1517, 1586, 1636
AhdI GACNNNNNGTC 1 cut(s) 1852
AjiI CACGTC 1 cut(s) 198
AjnI CCWGG 3 cut(s) 752, 956, 1338
AloI GAACNNNNNNTCC 2 cut(s) 61, 93
Alw21I GWGCWC 1 cut(s) 1252
Alw26I GTCTC 4 cut(s) 181, 1026, 1754, 1865
AlwI GGATC 5 cut(s) 174, 599, 681, 688, 1533
Ama87I CYCGRG 1 cut(s) 650
Aor13HI TCCGGA 1 cut(s) 1388
Aor51HI AGCGCT 1 cut(s) 599
ApeKI GCWGC 2 cut(s) 437, 890
ApoI RAATTY 2 cut(s) 1114, 1947
ArsI GACNNNNNNTTYG 4 cut(s) 905, 937, 1667, 1699
Asp700I GAANNNNTTC 1 cut(s) 965
AspLEI GCGC 3 cut(s) 35, 600, 1891
AspS9I GGNCC 5 cut(s) 95, 345, 614, 1336, 1957
AsuC2I CCSGG 2 cut(s) 618, 986
AsuHPI GGTGA 5 cut(s) 247, 1238, 1489, 1786, 1906
AvaI CYCGRG 1 cut(s) 650
AvaII GGWCC 4 cut(s) 95, 345, 1336, 1957
BaeGI GKGCMC 1 cut(s) 905
BalI TGGCCA 2 cut(s) 752, 1944
BanI GGYRCC 4 cut(s) 32, 295, 401, 900
BauI CACGAG 1 cut(s) 803
BbrPI CACGTG 1 cut(s) 292
BbsI GAAGAC 1 cut(s) 572
Bbv12I GWGCWC 1 cut(s) 1252
BbvCI CCTCAGC 2 cut(s) 1040, 1358
BbvI GCAGC 2 cut(s) 449, 902
BccI CCATC 4 cut(s) 1280, 1286, 1552, 1934
BceAI ACGGC 3 cut(s) 166, 341, 1045
BcgI CGANNNNNNTGC 2 cut(s) 935, 969
BciT130I CCWGG 3 cut(s) 754, 958, 1340
BciVI GTATCC 1 cut(s) 1396
BclI TGATCA 2 cut(s) 1479, 1687
BcnI CCSGG 2 cut(s) 618, 986
BcoDI GTCTC 4 cut(s) 181, 1026, 1754, 1865
BfaI CTAG 5 cut(s) 473, 545, 684, 1851, 2003
BfoI RGCGCY 3 cut(s) 36, 601, 1892
BfuAI ACCTGC 1 cut(s) 393
BfuI GTATCC 1 cut(s) 1396
BglI GCCNNNNNGGC 1 cut(s) 1145
BglII AGATCT 2 cut(s) 517, 839
BisI GCNGC 5 cut(s) 438, 498, 891, 1242, 1617
BlpI GCTNAGC 1 cut(s) 1308
BlsI GCNGC 5 cut(s) 439, 499, 892, 1243, 1618
Bme1390I CCNGG 5 cut(s) 618, 754, 958, 986, 1340
Bme18I GGWCC 4 cut(s) 95, 345, 1336, 1957
BmeRI GACNNNNNGTC 1 cut(s) 1852
BmeT110I CYCGRG 1 cut(s) 650
BmgBI CACGTC 1 cut(s) 198
BmgT120I GGNCC 5 cut(s) 95, 345, 614, 1336, 1957
BmiI GGNNCC 5 cut(s) 34, 297, 403, 615, 902
BmrFI CCNGG 5 cut(s) 618, 754, 958, 986, 1340
BmsI GCATC 3 cut(s) 343, 1801, 2008
BpiI GAAGAC 1 cut(s) 572
BpmI CTGGAG 1 cut(s) 84
Bpu10I CCTNAGC 2 cut(s) 1040, 1358
Bpu1102I GCTNAGC 1 cut(s) 1308
BpuEI CTTGAG 4 cut(s) 353, 856, 1022, 1904
BpuMI CCSGG 2 cut(s) 618, 986
BsaAI YACGTR 2 cut(s) 292, 398
BsaHI GRCGYC 1 cut(s) 33
BsaI GGTCTC 2 cut(s) 181, 1026
BsaJI CCNNGG 1 cut(s) 1463
BsaWI WCCGGW 2 cut(s) 404, 1388
BsaXI ACNNNNNCTCC 8 cut(s) 61, 91, 115, 145, 1287, 1317, 1787, 1817
Bsc4I CCNNNNNNNGG 6 cut(s) 107, 163, 221, 504, 1469, 1966
Bse118I RCCGGY 3 cut(s) 1035, 1244, 1861
Bse3DI GCAATG 2 cut(s) 951, 1155
BseAI TCCGGA 1 cut(s) 1388
BseBI CCWGG 3 cut(s) 754, 958, 1340
BseDI CCNNGG 1 cut(s) 1463
BseGI GGATG 5 cut(s) 676, 1297, 1563, 1575, 1816
BseLI CCNNNNNNNGG 6 cut(s) 107, 163, 221, 504, 1469, 1966
BseMI GCAATG 2 cut(s) 951, 1155
BseMII CTCAG 5 cut(s) 1031, 1299, 1349, 1514, 1832
BseRI GAGGAG 4 cut(s) 907, 1019, 1081, 1567
BseSI GKGCMC 1 cut(s) 905
BseX3I CGGCCG 2 cut(s) 1242, 1952
BseXI GCAGC 2 cut(s) 449, 902
Bsh1236I CGCG 1 cut(s) 973
Bsh1285I CGRYCG 2 cut(s) 1245, 1955
BshNI GGYRCC 4 cut(s) 32, 295, 401, 900
BsiEI CGRYCG 2 cut(s) 1245, 1955
BsiHKAI GWGCWC 1 cut(s) 1252
BsiHKCI CYCGRG 1 cut(s) 650
BslFI GGGAC 3 cut(s) 1011, 1417, 1859
BslI CCNNNNNNNGG 6 cut(s) 107, 163, 221, 504, 1469, 1966
BsmAI GTCTC 4 cut(s) 181, 1026, 1754, 1865
BsmFI GGGAC 3 cut(s) 1011, 1417, 1859
BsmI GAATGC 1 cut(s) 857
Bso31I GGTCTC 2 cut(s) 181, 1026
BsoBI CYCGRG 1 cut(s) 650
Bsp1286I GDGCHC 2 cut(s) 905, 1252
Bsp13I TCCGGA 1 cut(s) 1388
Bsp1720I GCTNAGC 1 cut(s) 1308
Bsp19I CCATGG 1 cut(s) 1463
BspACI CCGC 8 cut(s) 363, 498, 538, 671, 971, 1211, 1241, 1617
BspCNI CTCAG 5 cut(s) 1032, 1300, 1350, 1513, 1833
BspEI TCCGGA 1 cut(s) 1388
BspFNI CGCG 1 cut(s) 973
BspLI GGNNCC 5 cut(s) 34, 297, 403, 615, 902
BspMI ACCTGC 1 cut(s) 393
BspPI GGATC 5 cut(s) 174, 599, 681, 688, 1533
BspQI GCTCTTC 1 cut(s) 1452
BspT107I GGYRCC 4 cut(s) 32, 295, 401, 900
BspTNI GGTCTC 2 cut(s) 181, 1026
BsrDI GCAATG 2 cut(s) 951, 1155
BsrFI RCCGGY 3 cut(s) 1035, 1244, 1861
BssAI RCCGGY 3 cut(s) 1035, 1244, 1861
BssECI CCNNGG 1 cut(s) 1463
BssNI GRCGYC 1 cut(s) 33
BssSI CACGAG 1 cut(s) 803
BssT1I CCWWGG 1 cut(s) 1463
Bst2BI CACGAG 1 cut(s) 803
Bst2UI CCWGG 3 cut(s) 754, 958, 1340
Bst4CI ACNGT 4 cut(s) 115, 239, 1187, 1713
Bst6I CTCTTC 4 cut(s) 90, 573, 1316, 1452
BstACI GRCGYC 1 cut(s) 33
BstAPI GCANNNNNTGC 2 cut(s) 270, 1016
BstBAI YACGTR 2 cut(s) 292, 398
BstC8I GCNNGC 1 cut(s) 1355
BstDEI CTNAG 6 cut(s) 1040, 1308, 1358, 1500, 1529, 1841
BstDSI CCRYGG 1 cut(s) 1463
BstF5I GGATG 5 cut(s) 676, 1297, 1563, 1575, 1816
BstFNI CGCG 1 cut(s) 973
BstH2I RGCGCY 3 cut(s) 36, 601, 1892
BstHHI GCGC 3 cut(s) 35, 600, 1891
BstMAI GTCTC 4 cut(s) 181, 1026, 1754, 1865
BstMCI CGRYCG 2 cut(s) 1245, 1955
BstNI CCWGG 3 cut(s) 754, 958, 1340
BstSCI CCNGG 5 cut(s) 616, 752, 956, 984, 1338
BstSLI GKGCMC 1 cut(s) 905
BstUI CGCG 1 cut(s) 973
BstV1I GCAGC 2 cut(s) 449, 902
BstV2I GAAGAC 1 cut(s) 572
BstX2I RGATCY 4 cut(s) 166, 517, 839, 1525
BstXI CCANNNNNNTGG 2 cut(s) 342, 760
BstYI RGATCY 4 cut(s) 166, 517, 839, 1525
BstZI CGGCCG 2 cut(s) 1242, 1952
BsuI GTATCC 1 cut(s) 1396
BtgI CCRYGG 1 cut(s) 1463
BtrI CACGTC 1 cut(s) 198
BtsCI GGATG 5 cut(s) 676, 1297, 1563, 1575, 1816
BtsI GCAGTG 1 cut(s) 1821
BtsIMutI CAGTG 3 cut(s) 1322, 1575, 1821
BveI ACCTGC 1 cut(s) 393
Cac8I GCNNGC 1 cut(s) 1355
CfoI GCGC 3 cut(s) 35, 600, 1891
Cfr10I RCCGGY 3 cut(s) 1035, 1244, 1861
Cfr13I GGNCC 5 cut(s) 95, 345, 614, 1336, 1957
CseI GACGC 1 cut(s) 477
CsiI ACCWGGT 1 cut(s) 1338
Csp6I GTAC 4 cut(s) 116, 395, 982, 1804
CviQI GTAC 4 cut(s) 116, 395, 982, 1804
DdeI CTNAG 6 cut(s) 1040, 1308, 1358, 1500, 1529, 1841
DinI GGCGCC 1 cut(s) 34
DraIII CACNNNGTG 1 cut(s) 295
DriI GACNNNNNGTC 1 cut(s) 1852
EaeI YGGCCR 5 cut(s) 750, 1242, 1614, 1942, 1952
EagI CGGCCG 2 cut(s) 1242, 1952
Eam1104I CTCTTC 4 cut(s) 90, 573, 1316, 1452
Eam1105I GACNNNNNGTC 1 cut(s) 1852
EarI CTCTTC 4 cut(s) 90, 573, 1316, 1452
EciI GGCGGA 2 cut(s) 686, 1226
EclXI CGGCCG 2 cut(s) 1242, 1952
Eco130I CCWWGG 1 cut(s) 1463
Eco31I GGTCTC 2 cut(s) 181, 1026
Eco47I GGWCC 4 cut(s) 95, 345, 1336, 1957
Eco47III AGCGCT 1 cut(s) 599
Eco52I CGGCCG 2 cut(s) 1242, 1952
Eco57I CTGAAG 2 cut(s) 1298, 1680
Eco72I CACGTG 1 cut(s) 292
Eco88I CYCGRG 1 cut(s) 650
EcoO109I RGGNCCY 1 cut(s) 1336
EcoRI GAATTC 1 cut(s) 1114
EcoRII CCWGG 3 cut(s) 752, 956, 1338
EcoT14I CCWWGG 1 cut(s) 1463
EgeI GGCGCC 1 cut(s) 34
EheI GGCGCC 1 cut(s) 34
ErhI CCWWGG 1 cut(s) 1463
FalI AAGNNNNNCTT 2 cut(s) 1913, 1945
FaqI GGGAC 3 cut(s) 1011, 1417, 1859
FauI CCCGC 1 cut(s) 978
FbaI TGATCA 2 cut(s) 1479, 1687
FblI GTMKAC 2 cut(s) 627, 1856
Fnu4HI GCNGC 5 cut(s) 438, 498, 891, 1242, 1617
FokI GGATG 5 cut(s) 663, 1304, 1570, 1582, 1823
Fsp4HI GCNGC 5 cut(s) 438, 498, 891, 1242, 1617
FspBI CTAG 5 cut(s) 473, 545, 684, 1851, 2003
GlaI GCGC 3 cut(s) 34, 599, 1890
GluI GCNGC 5 cut(s) 438, 498, 891, 1242, 1617
GsuI CTGGAG 1 cut(s) 84
HaeII RGCGCY 3 cut(s) 36, 601, 1892
HgaI GACGC 1 cut(s) 477
HhaI GCGC 3 cut(s) 35, 600, 1891
Hin1I GRCGYC 1 cut(s) 33
Hin6I GCGC 3 cut(s) 33, 598, 1889
HinP1I GCGC 3 cut(s) 33, 598, 1889
HincII GTYRAC 2 cut(s) 58, 201
HindII GTYRAC 2 cut(s) 58, 201
HphI GGTGA 5 cut(s) 247, 1238, 1489, 1786, 1906
Hpy166II GTNNAC 5 cut(s) 58, 201, 395, 628, 1857
Hpy188I TCNGA 9 cut(s) 110, 698, 817, 844, 1281, 1447, 1494, 1602, 1842
Hpy188III TCNNGA 5 cut(s) 101, 545, 562, 803, 1389
Hpy8I GTNNAC 5 cut(s) 58, 201, 395, 628, 1857
Hpy99I CGWCG 1 cut(s) 493
HpyCH4III ACNGT 4 cut(s) 115, 239, 1187, 1713
HpyCH4IV ACGT 4 cut(s) 197, 291, 397, 1383
HpyCH4V TGCA 3 cut(s) 381, 1507, 1814
HpyF3I CTNAG 6 cut(s) 1040, 1308, 1358, 1500, 1529, 1841
HpySE526I ACGT 4 cut(s) 197, 291, 397, 1383
Hsp92I GRCGYC 1 cut(s) 33
HspAI GCGC 3 cut(s) 33, 598, 1889
KasI GGCGCC 1 cut(s) 32
Kpn2I TCCGGA 1 cut(s) 1388
Ksp22I TGATCA 2 cut(s) 1479, 1687
LguI GCTCTTC 1 cut(s) 1452
LmnI GCTCC 5 cut(s) 136, 336, 1345, 1538, 1642
Lsp1109I GCAGC 2 cut(s) 449, 902
LweI GCATC 3 cut(s) 343, 1801, 2008
MabI ACCWGGT 1 cut(s) 1338
MaeI CTAG 5 cut(s) 473, 545, 684, 1851, 2003
MaeII ACGT 4 cut(s) 197, 291, 397, 1383
MaeIII GTNAC 5 cut(s) 358, 413, 639, 1379, 1864
MboII GAAGA 8 cut(s) 77, 80, 277, 577, 590, 871, 1333, 1469
MflI RGATCY 4 cut(s) 166, 517, 839, 1525
MhlI GDGCHC 2 cut(s) 905, 1252
MlsI TGGCCA 2 cut(s) 752, 1944
MluNI TGGCCA 2 cut(s) 752, 1944
Mly113I GGCGCC 1 cut(s) 33
MlyI GAGTC 4 cut(s) 776, 908, 1399, 1841
MmeI TCCRAC 2 cut(s) 372, 1425
Mox20I TGGCCA 2 cut(s) 752, 1944
MroI TCCGGA 1 cut(s) 1388
MroXI GAANNNNTTC 1 cut(s) 965
MscI TGGCCA 2 cut(s) 752, 1944
MseI TTAA 3 cut(s) 635, 659, 2017
Msp20I TGGCCA 2 cut(s) 752, 1944
MspA1I CMGCKG 1 cut(s) 1619
MspR9I CCNGG 5 cut(s) 618, 754, 958, 986, 1340
Mva1269I GAATGC 1 cut(s) 857
MvaI CCWGG 3 cut(s) 754, 958, 1340
MvnI CGCG 1 cut(s) 973
NarI GGCGCC 1 cut(s) 33
NciI CCSGG 2 cut(s) 618, 986
NcoI CCATGG 1 cut(s) 1463
NlaIV GGNNCC 5 cut(s) 34, 297, 403, 615, 902
NmeAIII GCCGAG 1 cut(s) 853
NmuCI GTSAC 3 cut(s) 413, 639, 1379
PciSI GCTCTTC 1 cut(s) 1452
PctI GAATGC 1 cut(s) 857
PdmI GAANNNNTTC 1 cut(s) 965
PfeI GAWTC 6 cut(s) 529, 738, 1513, 1603, 1837, 1912
PkrI GCNGC 5 cut(s) 439, 499, 892, 1243, 1618
PleI GAGTC 4 cut(s) 776, 908, 1399, 1841
PluTI GGCGCC 1 cut(s) 36
PmaCI CACGTG 1 cut(s) 292
PmlI CACGTG 1 cut(s) 292
PpsI GAGTC 4 cut(s) 776, 908, 1399, 1841
Ppu21I YACGTR 2 cut(s) 292, 398
PpuMI RGGWCCY 1 cut(s) 1336
Psp5II RGGWCCY 1 cut(s) 1336
Psp6I CCWGG 3 cut(s) 752, 956, 1338
PspCI CACGTG 1 cut(s) 292
PspGI CCWGG 3 cut(s) 752, 956, 1338
PspN4I GGNNCC 5 cut(s) 34, 297, 403, 615, 902
PspPI GGNCC 5 cut(s) 95, 345, 614, 1336, 1957
PspPPI RGGWCCY 1 cut(s) 1336
PsuI RGATCY 4 cut(s) 166, 517, 839, 1525
RsaI GTAC 4 cut(s) 117, 396, 983, 1805
RsaNI GTAC 4 cut(s) 116, 395, 982, 1804
SapI GCTCTTC 1 cut(s) 1452
SaqAI TTAA 3 cut(s) 635, 659, 2017
SatI GCNGC 5 cut(s) 438, 498, 891, 1242, 1617
Sau96I GGNCC 5 cut(s) 95, 345, 614, 1336, 1957
SchI GAGTC 4 cut(s) 776, 908, 1399, 1841
ScrFI CCNGG 5 cut(s) 618, 754, 958, 986, 1340
SduI GDGCHC 2 cut(s) 905, 1252
SexAI ACCWGGT 1 cut(s) 1338
SfaNI GCATC 3 cut(s) 343, 1801, 2008
SfoI GGCGCC 1 cut(s) 34
SinI GGWCC 4 cut(s) 95, 345, 1336, 1957
SmlI CTYRAG 4 cut(s) 368, 835, 1001, 1919
SmoI CTYRAG 4 cut(s) 368, 835, 1001, 1919
SsiI CCGC 8 cut(s) 363, 498, 538, 671, 971, 1211, 1241, 1617
SspDI GGCGCC 1 cut(s) 32
SspI AATATT 2 cut(s) 317, 1205
SspMI CTAG 5 cut(s) 473, 545, 684, 1851, 2003
StyD4I CCNGG 5 cut(s) 616, 752, 956, 984, 1338
StyI CCWWGG 1 cut(s) 1463
TaaI ACNGT 4 cut(s) 115, 239, 1187, 1713
TaiI ACGT 4 cut(s) 200, 294, 400, 1386
TaqI TCGA 2 cut(s) 912, 924
TaqII GACCGA 2 cut(s) 83, 245
TauI GCSGC 3 cut(s) 500, 1244, 1619
TfiI GAWTC 6 cut(s) 529, 738, 1513, 1603, 1837, 1912
Tru1I TTAA 3 cut(s) 635, 659, 2017
Tru9I TTAA 3 cut(s) 635, 659, 2017
TscAI CASTG 3 cut(s) 1322, 1582, 1821
TseFI GTSAC 3 cut(s) 413, 639, 1379
TseI GCWGC 2 cut(s) 437, 890
Tsp45I GTSAC 3 cut(s) 413, 639, 1379
TspDTI ATGAA 6 cut(s) 17, 151, 747, 1162, 1166, 1586
TspGWI ACGGA 1 cut(s) 1883
TspRI CASTG 3 cut(s) 1322, 1582, 1821
VpaK11BI GGWCC 4 cut(s) 95, 345, 1336, 1957
XapI RAATTY 2 cut(s) 1114, 1947
XbaI TCTAGA 1 cut(s) 544
XmiI GTMKAC 2 cut(s) 627, 1856
XmnI GAANNNNTTC 1 cut(s) 965
XspI CTAG 5 cut(s) 473, 545, 684, 1851, 2003
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.