AT5G13210

conserved protein UCP015417, vWA (InterPro IPR011205), von Willebrand factor, type A (InterPro IPR002035)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000255
Physical Location & Seq
Forward (+)
4213955 .. 4216908
2954 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G13210.1

Sequence Viewer

Length: 2022 bp
ATGTCTCCTTCTCCTCTGCTTGGTCCACCTGAGCTCAGAGATCCCAACTCTCTCCTCCCAAAACCCACCACAACTTCTGGTCCCAGCGACCCTTTCATGGACGCTATGGTTTCAAATTTCAACAACTCAGCTAGAGTCAACAACGTCAACTCTCCTCCGATGGGCTACACCGAGAATAAATCCGCCACTTACCTCTCCTCAGGCAACCCCTGCCTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAAACACTCTCTCGAGCAGTGGTTACAAGGTGCTTGGGACCACGACGCCTTGACCACACTCAAGCTTATCTGTAATCTTCGTGGAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTATGGCTCCATGGTCGTCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTTTCTCAATTTGGATACTTTAAAGATTTTCCAGAGCTTCTTTACCGGATTCTACAAGGATCTGAAATCCGGAAGATCCAGAAATCAGAAAGGTTCAAGAGGAAAAGTGAAGCTCTAGATAGAAGAGCTCCTTATGATGGTCATTGTTATCATGGTCGTCTTTATGGTGGTCGTGGACGTGGATCTAGTCGCCCCAGTAGTAAAAGGAAGCCAGTGGCGACGAGGGCGTTGAGAGTAGCCAACGCTGAGAGGAAGAATCAAGCCGAGAAAGCCAGAGCAAGCTTGGATCGGAAGAAAAAGAAGGTTTCGATGGGGAAGGACGCGTTTACAAGATATTCTTGCGATCCAGACTATAGATATCTCCACGAACGCGTCTCTGATCTATTCGCAAATCAGCTAAAGAAAGATCTTGAGTTTTTGACATCGGACAAACCAAACGAAATCTCTCTTGCTGCTAAATGGTGTCCATCGCTTGACTCTTCGTTTGACAAAGCAACTCTTCTCTGCGAGAGCATTGCTAGGAAGATCTTTACTCGAGAATCATTCCCTGAATACGAAGGCGTTGTAGAAGCTCACTATGCATACAGAGTTCGTGATCGGCTAAGGAAAGATGTTCTTGTTCCTCTGCGTAAAACTCTGCAACTGCCTGAAGTATATATGGGAGCGAGAAACTGGGATATTCTTCCGTACAACCGTGTAGCATCAGTGGCGATGAAGTCGTACAAGGAGATATTCTTGAAGCACGACGCAGAGAGGTTTCAGCAATATCTTGACGATGCAAAGGCGGGGAAAACCAAGGTAGCTGCTGGTGCTGTGTTGCCTCATGAGATAATCAGAGAGTTAGACGGTGGAGACGGTGGACAAGTAGCAGAGCTGCAATGGAAGAGAACGGTAGATGATATGAAAGAGAAAGGTTCTTTGAGGAATTGTATAGCTGTCTGTGACGTTTCAGGGTCTATGAATGGTGAACCAATGGAGGTTTGTGTGGCTTTGGGTCTGCTAGTCTCTGAGCTATCTGAAGAGCCATGGAAAGGAAAGCTAATAACTTTCAGCCAAAATCCGGAGTTGCATTTGGTGAAAGGAGACGATCTGTACTCAAAAACAGAGTTTGTTAAAAAAATGCAATGGGGTATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTGGAGTGGCCGTACAAGAGAAGCTGAAGCCGGAAGAGATGATCAAGAGGGTGTTTGTGTTCAGTGATATGGAGTTTGATCAAGCGGCGTCGTCGTCACATTATTCAAGACCAGGCTATGCATTTTTAAGGCAGCCTCCAAGTAATCCAAGTAATGGATGGGAAACGGATTATGAAGTGATTGTGAGGAAGTATAAACAGAATGGGTATGGAGACGTTGTGCCGGAGATAGTGTTTTGGAACTTGAGGGATTCGAGAGCAACGCCGGTGCCGGGAAACAAGAAAGGAGTGGCTTTGGTGAGTGGCTTTTCGAAGAATTTGATGAAAATGTTTTTGGAACATGATGGAGAGATTGATCCTGTGATGATGATGGAGACTGCTATTTCTAAAGATGAGTATAAGTCGCTTGTTGTTGTTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

673

Amino Acids

76.23

Weight (kDa)

8.93

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 57 - 451 2.8e-138 Domain of unknown function (DUF2828)
DUF7788 PF25043 453 - 654 3.6e-82 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 341, 1867
AccB7I CCANNNNNTGG 1 cut(s) 1754
AccII CGCG 2 cut(s) 755, 804
AccIII TCCGGA 2 cut(s) 501, 1492
AciI CCGC 4 cut(s) 183, 377, 1217, 1685
AclWI GGATC 7 cut(s) 35, 499, 502, 622, 726, 770, 1949
AcoI YGGCCR 1 cut(s) 1608
AcsI RAATTY 2 cut(s) 115, 1915
AcuI CTGAAG 3 cut(s) 1101, 1470, 1646
AcyI GRCGYC 2 cut(s) 294, 1688
AfaI GTAC 4 cut(s) 1121, 1154, 1526, 1614
AfiI CCNNNNNNNGG 8 cut(s) 20, 97, 161, 569, 1463, 1492, 1754, 1871
AflIII ACRYGT 2 cut(s) 753, 802
AgsI TTSAA 5 cut(s) 114, 121, 529, 1171, 1707
AjiI CACGTC 1 cut(s) 611
AjnI CCWGG 1 cut(s) 1711
AjuI GAANNNNNNNTTGG 2 cut(s) 1916, 1948
Alw21I GWGCWC 2 cut(s) 36, 562
Alw26I GTCTC 8 cut(s) 9, 435, 811, 1278, 1441, 1509, 1806, 1967
AlwI GGATC 7 cut(s) 35, 499, 502, 622, 726, 770, 1949
Ama87I CYCGRG 3 cut(s) 260, 425, 966
Aor13HI TCCGGA 2 cut(s) 501, 1492
AoxI GGCC 1 cut(s) 1608
ApeKI GCWGC 4 cut(s) 884, 1235, 1306, 1732
ApoI RAATTY 2 cut(s) 115, 1915
ArsI GACNNNNNNTTYG 2 cut(s) 899, 931
AspS9I GGNCC 3 cut(s) 23, 80, 286
AsuC2I CCSGG 1 cut(s) 1872
AsuHPI GGTGA 3 cut(s) 1409, 1519, 1909
AsuII TTCGAA 1 cut(s) 1910
AvaI CYCGRG 3 cut(s) 260, 425, 966
AvaII GGWCC 3 cut(s) 23, 80, 286
AxyI CCTNAGG 1 cut(s) 199
BanI GGYRCC 2 cut(s) 341, 1867
BanII GRGCYC 2 cut(s) 36, 562
Bbv12I GWGCWC 2 cut(s) 36, 562
BbvI GCAGC 4 cut(s) 871, 1222, 1293, 1744
BccI CCATC 7 cut(s) 154, 563, 736, 907, 1752, 1937, 1963
BceAI ACGGC 2 cut(s) 390, 1595
BcgI CGANNNNNNTGC 2 cut(s) 929, 963
BciT130I CCWGG 1 cut(s) 1713
BciVI GTATCC 1 cut(s) 440
BclI TGATCA 2 cut(s) 1641, 1678
BcnI CCSGG 1 cut(s) 1872
BcoDI GTCTC 8 cut(s) 9, 435, 811, 1278, 1441, 1509, 1806, 1967
BfaI CTAG 6 cut(s) 132, 413, 548, 618, 951, 1433
BfmI CTRYAG 1 cut(s) 784
BfuI GTATCC 1 cut(s) 440
BglII AGATCT 2 cut(s) 838, 957
BisI GCNGC 6 cut(s) 378, 885, 1236, 1307, 1686, 1733
BlsI GCNGC 6 cut(s) 379, 886, 1237, 1308, 1687, 1734
Bme1390I CCNGG 2 cut(s) 1713, 1872
Bme18I GGWCC 3 cut(s) 23, 80, 286
BmeT110I CYCGRG 3 cut(s) 260, 425, 966
BmgBI CACGTC 1 cut(s) 611
BmgT120I GGNCC 3 cut(s) 23, 80, 286
BmiI GGNNCC 5 cut(s) 82, 287, 343, 389, 1869
BmrFI CCNGG 2 cut(s) 1713, 1872
BmrI ACTGGG 2 cut(s) 621, 1114
BmsI GCATC 2 cut(s) 1142, 1198
BmuI ACTGGG 2 cut(s) 621, 1114
Bpu10I CCTNAGC 2 cut(s) 30, 1034
Bpu14I TTCGAA 1 cut(s) 1910
BpuEI CTTGAG 3 cut(s) 293, 863, 1864
BpuMI CCSGG 1 cut(s) 1872
BsaHI GRCGYC 2 cut(s) 294, 1688
BsaJI CCNNGG 4 cut(s) 337, 391, 1227, 1457
BsaWI WCCGGW 4 cut(s) 344, 477, 501, 1492
BsaXI ACNNNNNCTCC 6 cut(s) 1596, 1626, 1803, 1817, 1833, 1847
Bsc4I CCNNNNNNNGG 8 cut(s) 20, 97, 161, 569, 1463, 1492, 1754, 1871
Bse118I RCCGGY 1 cut(s) 1864
Bse1I ACTGG 3 cut(s) 627, 644, 1109
Bse21I CCTNAGG 1 cut(s) 199
Bse3DI GCAATG 3 cut(s) 945, 1316, 1562
BseAI TCCGGA 2 cut(s) 501, 1492
BseBI CCWGG 1 cut(s) 1713
BseDI CCNNGG 4 cut(s) 337, 391, 1227, 1457
BseGI GGATG 2 cut(s) 400, 1763
BseLI CCNNNNNNNGG 8 cut(s) 20, 97, 161, 569, 1463, 1492, 1754, 1871
BseMI GCAATG 3 cut(s) 945, 1316, 1562
BseMII CTCAG 6 cut(s) 21, 49, 141, 213, 669, 1431
BseNI ACTGG 3 cut(s) 627, 644, 1109
BseRI GAGGAG 3 cut(s) 44, 144, 187
BseXI GCAGC 4 cut(s) 871, 1222, 1293, 1744
BseYI CCCAGC 1 cut(s) 83
Bsh1236I CGCG 2 cut(s) 755, 804
BshFI GGCC 1 cut(s) 1610
BshNI GGYRCC 2 cut(s) 341, 1867
BsiHKAI GWGCWC 2 cut(s) 36, 562
BsiHKCI CYCGRG 3 cut(s) 260, 425, 966
BsiSI CCGG 8 cut(s) 345, 478, 502, 1493, 1631, 1823, 1865, 1871
BslFI GGGAC 2 cut(s) 66, 299
BslI CCNNNNNNNGG 8 cut(s) 20, 97, 161, 569, 1463, 1492, 1754, 1871
BsmAI GTCTC 8 cut(s) 9, 435, 811, 1278, 1441, 1509, 1806, 1967
BsmBI CGTCTC 4 cut(s) 811, 1278, 1509, 1806
BsmFI GGGAC 2 cut(s) 66, 299
BsnI GGCC 1 cut(s) 1610
BsoBI CYCGRG 3 cut(s) 260, 425, 966
Bsp119I TTCGAA 1 cut(s) 1910
Bsp1286I GDGCHC 2 cut(s) 36, 562
Bsp13I TCCGGA 2 cut(s) 501, 1492
Bsp19I CCATGG 2 cut(s) 391, 1457
BspACI CCGC 4 cut(s) 183, 377, 1217, 1685
BspANI GGCC 1 cut(s) 1610
BspCNI CTCAG 6 cut(s) 22, 48, 140, 212, 670, 1432
BspEI TCCGGA 2 cut(s) 501, 1492
BspFNI CGCG 2 cut(s) 755, 804
BspHI TCATGA 1 cut(s) 1255
BspLI GGNNCC 5 cut(s) 82, 287, 343, 389, 1869
BspPI GGATC 7 cut(s) 35, 499, 502, 622, 726, 770, 1949
BspQI GCTCTTC 2 cut(s) 550, 1446
BspT104I TTCGAA 1 cut(s) 1910
BspT107I GGYRCC 2 cut(s) 341, 1867
BsrDI GCAATG 3 cut(s) 945, 1316, 1562
BsrFI RCCGGY 1 cut(s) 1864
BsrI ACTGG 3 cut(s) 627, 644, 1109
BssAI RCCGGY 1 cut(s) 1864
BssECI CCNNGG 4 cut(s) 337, 391, 1227, 1457
BssNI GRCGYC 2 cut(s) 294, 1688
BssT1I CCWWGG 3 cut(s) 391, 1227, 1457
Bst2UI CCWGG 1 cut(s) 1713
Bst4CI ACNGT 4 cut(s) 1127, 1280, 1289, 1324
Bst6I CTCTTC 6 cut(s) 550, 916, 936, 1310, 1446, 1629
BstACI GRCGYC 2 cut(s) 294, 1688
BstAPI GCANNNNNTGC 1 cut(s) 210
BstBI TTCGAA 1 cut(s) 1910
BstC8I GCNNGC 2 cut(s) 245, 712
BstDEI CTNAG 7 cut(s) 30, 35, 127, 199, 678, 1034, 1440
BstDSI CCRYGG 3 cut(s) 337, 391, 1457
BstF5I GGATG 2 cut(s) 400, 1763
BstFNI CGCG 2 cut(s) 755, 804
BstMAI GTCTC 8 cut(s) 9, 435, 811, 1278, 1441, 1509, 1806, 1967
BstMWI GCNNNNNNNGC 6 cut(s) 210, 656, 701, 1010, 1139, 1241
BstNI CCWGG 1 cut(s) 1713
BstSCI CCNGG 2 cut(s) 1711, 1870
BstSFI CTRYAG 1 cut(s) 784
BstUI CGCG 2 cut(s) 755, 804
BstV1I GCAGC 4 cut(s) 871, 1222, 1293, 1744
BstX2I RGATCY 6 cut(s) 40, 491, 507, 614, 838, 957
BstYI RGATCY 6 cut(s) 40, 491, 507, 614, 838, 957
Bsu36I CCTNAGG 1 cut(s) 199
BsuI GTATCC 1 cut(s) 440
BsuRI GGCC 1 cut(s) 1610
BtgI CCRYGG 3 cut(s) 337, 391, 1457
BtgZI GCGATG 2 cut(s) 885, 1157
BtrI CACGTC 1 cut(s) 611
BtsCI GGATG 2 cut(s) 400, 1763
BtsI GCAGTG 1 cut(s) 272
BtsIMutI CAGTG 5 cut(s) 272, 651, 1143, 1569, 1669
Cac8I GCNNGC 2 cut(s) 245, 712
CciI TCATGA 1 cut(s) 1255
Cfr10I RCCGGY 1 cut(s) 1864
Cfr13I GGNCC 3 cut(s) 23, 80, 286
CseI GACGC 6 cut(s) 110, 302, 761, 793, 1187, 1677
Csp6I GTAC 4 cut(s) 1120, 1153, 1525, 1613
CviAII CATG 6 cut(s) 97, 392, 584, 1256, 1458, 1940
CviQI GTAC 4 cut(s) 1120, 1153, 1525, 1613
DdeI CTNAG 7 cut(s) 30, 35, 127, 199, 678, 1034, 1440
DraI TTTAAA 1 cut(s) 454
EaeI YGGCCR 1 cut(s) 1608
Eam1104I CTCTTC 6 cut(s) 550, 916, 936, 1310, 1446, 1629
EarI CTCTTC 6 cut(s) 550, 916, 936, 1310, 1446, 1629
EciI GGCGGA 1 cut(s) 172
Ecl136II GAGCTC 2 cut(s) 34, 560
Eco130I CCWWGG 3 cut(s) 391, 1227, 1457
Eco24I GRGCYC 2 cut(s) 36, 562
Eco32I GATATC 1 cut(s) 791
Eco47I GGWCC 3 cut(s) 23, 80, 286
Eco53kI GAGCTC 2 cut(s) 34, 560
Eco57I CTGAAG 3 cut(s) 1101, 1470, 1646
Eco81I CCTNAGG 1 cut(s) 199
Eco88I CYCGRG 3 cut(s) 260, 425, 966
EcoICRI GAGCTC 2 cut(s) 34, 560
EcoRII CCWGG 1 cut(s) 1711
EcoRV GATATC 1 cut(s) 791
EcoT14I CCWWGG 3 cut(s) 391, 1227, 1457
EcoT22I ATGCAT 2 cut(s) 1015, 1723
EcoT38I GRGCYC 2 cut(s) 36, 562
ErhI CCWWGG 3 cut(s) 391, 1227, 1457
Esp3I CGTCTC 4 cut(s) 811, 1278, 1509, 1806
FaeI CATG 6 cut(s) 100, 395, 587, 1259, 1461, 1943
FalI AAGNNNNNCTT 8 cut(s) 547, 579, 754, 786, 915, 947, 1032, 1064
FaqI GGGAC 2 cut(s) 66, 299
FatI CATG 6 cut(s) 96, 391, 583, 1255, 1457, 1939
FauI CCCGC 1 cut(s) 1210
FbaI TGATCA 2 cut(s) 1641, 1678
Fnu4HI GCNGC 6 cut(s) 378, 885, 1236, 1307, 1686, 1733
FokI GGATG 2 cut(s) 387, 1770
FriOI GRGCYC 2 cut(s) 36, 562
Fsp4HI GCNGC 6 cut(s) 378, 885, 1236, 1307, 1686, 1733
FspBI CTAG 6 cut(s) 132, 413, 548, 618, 951, 1433
GluI GCNGC 6 cut(s) 378, 885, 1236, 1307, 1686, 1733
GsaI CCCAGC 1 cut(s) 87
HaeIII GGCC 1 cut(s) 1610
HapII CCGG 8 cut(s) 345, 478, 502, 1493, 1631, 1823, 1865, 1871
HgaI GACGC 6 cut(s) 110, 302, 761, 793, 1187, 1677
Hin1I GRCGYC 2 cut(s) 294, 1688
Hin1II CATG 6 cut(s) 100, 395, 587, 1259, 1461, 1943
HincII GTYRAC 2 cut(s) 139, 148
HindII GTYRAC 2 cut(s) 139, 148
HindIII AAGCTT 2 cut(s) 311, 712
HinfI GANTC 9 cut(s) 135, 333, 428, 481, 688, 908, 971, 1597, 1850
HpaII CCGG 8 cut(s) 345, 478, 502, 1493, 1631, 1823, 1865, 1871
HphI GGTGA 3 cut(s) 1409, 1519, 1909
Hpy166II GTNNAC 7 cut(s) 26, 139, 148, 608, 759, 1292, 1400
Hpy8I GTNNAC 7 cut(s) 26, 139, 148, 608, 759, 1292, 1400
Hpy99I CGWCG 5 cut(s) 296, 655, 1181, 1693, 1696
HpyAV CCTTC 5 cut(s) 18, 356, 727, 742, 983
HpyCH4III ACNGT 4 cut(s) 1127, 1280, 1289, 1324
HpyCH4IV ACGT 5 cut(s) 144, 231, 610, 1377, 1815
HpyCH4V TGCA 7 cut(s) 1013, 1072, 1211, 1309, 1501, 1555, 1721
HpyF10VI GCNNNNNNNGC 6 cut(s) 210, 656, 701, 1010, 1139, 1241
HpyF3I CTNAG 7 cut(s) 30, 35, 127, 199, 678, 1034, 1440
HpySE526I ACGT 5 cut(s) 144, 231, 610, 1377, 1815
Hsp92I GRCGYC 2 cut(s) 294, 1688
Hsp92II CATG 6 cut(s) 100, 395, 587, 1259, 1461, 1943
Kpn2I TCCGGA 2 cut(s) 501, 1492
Ksp22I TGATCA 2 cut(s) 1641, 1678
LguI GCTCTTC 2 cut(s) 550, 1446
LmnI GCTCC 3 cut(s) 393, 565, 1094
Lsp1109I GCAGC 4 cut(s) 871, 1222, 1293, 1744
LweI GCATC 2 cut(s) 1142, 1198
MaeI CTAG 6 cut(s) 132, 413, 548, 618, 951, 1433
MaeII ACGT 5 cut(s) 144, 231, 610, 1377, 1815
MaeIII GTNAC 4 cut(s) 270, 419, 1373, 1695
MflI RGATCY 6 cut(s) 40, 491, 507, 614, 838, 957
MhlI GDGCHC 2 cut(s) 36, 562
MluCI AATT 4 cut(s) 115, 440, 1357, 1915
MluI ACGCGT 2 cut(s) 753, 802
MlyI GAGTC 4 cut(s) 144, 342, 437, 902
MmeI TCCRAC 1 cut(s) 378
Mph1103I ATGCAT 2 cut(s) 1015, 1723
MroI TCCGGA 2 cut(s) 501, 1492
MseI TTAA 4 cut(s) 453, 1545, 1727, 2020
MspI CCGG 8 cut(s) 345, 478, 502, 1493, 1631, 1823, 1865, 1871
MspR9I CCNGG 2 cut(s) 1713, 1872
MvaI CCWGG 1 cut(s) 1713
MvnI CGCG 2 cut(s) 755, 804
MwoI GCNNNNNNNGC 6 cut(s) 210, 656, 701, 1010, 1139, 1241
NciI CCSGG 1 cut(s) 1872
NcoI CCATGG 2 cut(s) 391, 1457
NlaIII CATG 6 cut(s) 100, 395, 587, 1259, 1461, 1943
NlaIV GGNNCC 5 cut(s) 82, 287, 343, 389, 1869
NmeAIII GCCGAG 1 cut(s) 721
NmuCI GTSAC 2 cut(s) 1373, 1695
NsiI ATGCAT 2 cut(s) 1015, 1723
NspV TTCGAA 1 cut(s) 1910
PaeR7I CTCGAG 3 cut(s) 260, 425, 966
PagI TCATGA 1 cut(s) 1255
PciSI GCTCTTC 2 cut(s) 550, 1446
PcsI WCGNNNNNNNCGW 1 cut(s) 334
PfeI GAWTC 5 cut(s) 481, 688, 971, 1597, 1850
PflMI CCANNNNNTGG 1 cut(s) 1754
PkrI GCNGC 6 cut(s) 379, 886, 1237, 1308, 1687, 1734
PleI GAGTC 4 cut(s) 143, 341, 436, 902
PpsI GAGTC 4 cut(s) 143, 341, 436, 902
Psp124BI GAGCTC 2 cut(s) 36, 562
Psp6I CCWGG 1 cut(s) 1711
PspFI CCCAGC 1 cut(s) 83
PspGI CCWGG 1 cut(s) 1711
PspN4I GGNNCC 5 cut(s) 82, 287, 343, 389, 1869
PspPI GGNCC 3 cut(s) 23, 80, 286
PspXI VCTCGAGB 1 cut(s) 425
PsuI RGATCY 6 cut(s) 40, 491, 507, 614, 838, 957
RsaI GTAC 4 cut(s) 1121, 1154, 1526, 1614
RsaNI GTAC 4 cut(s) 1120, 1153, 1525, 1613
SacI GAGCTC 2 cut(s) 36, 562
SapI GCTCTTC 2 cut(s) 550, 1446
SaqAI TTAA 4 cut(s) 453, 1545, 1727, 2020
SatI GCNGC 6 cut(s) 378, 885, 1236, 1307, 1686, 1733
Sau96I GGNCC 3 cut(s) 23, 80, 286
SchI GAGTC 4 cut(s) 144, 342, 437, 902
ScrFI CCNGG 2 cut(s) 1713, 1872
SduI GDGCHC 2 cut(s) 36, 562
SfaNI GCATC 2 cut(s) 1142, 1198
SfcI CTRYAG 1 cut(s) 784
Sfr274I CTCGAG 3 cut(s) 260, 425, 966
SfuI TTCGAA 1 cut(s) 1910
SgrAI CRCCGGYG 1 cut(s) 1864
SinI GGWCC 3 cut(s) 23, 80, 286
SlaI CTCGAG 3 cut(s) 260, 425, 966
SmlI CTYRAG 6 cut(s) 260, 308, 425, 842, 966, 1843
SmoI CTYRAG 6 cut(s) 260, 308, 425, 842, 966, 1843
Sse9I AATT 4 cut(s) 115, 440, 1357, 1915
SsiI CCGC 4 cut(s) 183, 377, 1217, 1685
SspMI CTAG 6 cut(s) 132, 413, 548, 618, 951, 1433
SstI GAGCTC 2 cut(s) 36, 562
StyD4I CCNGG 2 cut(s) 1711, 1870
StyI CCWWGG 3 cut(s) 391, 1227, 1457
TaaI ACNGT 4 cut(s) 1127, 1280, 1289, 1324
TaiI ACGT 5 cut(s) 147, 234, 613, 1380, 1818
TaqI TCGA 7 cut(s) 216, 261, 426, 740, 967, 1853, 1910
TasI AATT 4 cut(s) 115, 440, 1357, 1915
TatI WGTACW 1 cut(s) 1524
TauI GCSGC 2 cut(s) 380, 1688
TfiI GAWTC 5 cut(s) 481, 688, 971, 1597, 1850
Tru1I TTAA 4 cut(s) 453, 1545, 1727, 2020
Tru9I TTAA 4 cut(s) 453, 1545, 1727, 2020
TscAI CASTG 5 cut(s) 272, 651, 1143, 1576, 1669
TseFI GTSAC 2 cut(s) 1373, 1695
TseI GCWGC 4 cut(s) 884, 1235, 1306, 1732
Tsp45I GTSAC 2 cut(s) 1373, 1695
TspDTI ATGAA 7 cut(s) 85, 1160, 1349, 1406, 1580, 1788, 1937
TspGWI ACGGA 3 cut(s) 326, 1107, 1781
TspRI CASTG 5 cut(s) 272, 651, 1143, 1576, 1669
Van91I CCANNNNNTGG 1 cut(s) 1754
VpaK11BI GGWCC 3 cut(s) 23, 80, 286
XapI RAATTY 2 cut(s) 115, 1915
XbaI TCTAGA 1 cut(s) 547
XcmI CCANNNNNNNNNTGG 2 cut(s) 712, 1755
XhoI CTCGAG 3 cut(s) 260, 425, 966
XspI CTAG 6 cut(s) 132, 413, 548, 618, 951, 1433
Zsp2I ATGCAT 2 cut(s) 1015, 1723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.