Domain of unknown function (DUF2828)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 53, 193 |
| AciI | CCGC | 3 cut(s) | 57, 60, 171 |
| AclWI | GGATC | 1 cut(s) | 208 |
| AfeI | AGCGCT | 1 cut(s) | 166 |
| AgsI | TTSAA | 1 cut(s) | 28 |
| AjnI | CCWGG | 1 cut(s) | 89 |
| Alw26I | GTCTC | 3 cut(s) | 3, 93, 176 |
| AlwI | GGATC | 1 cut(s) | 208 |
| Ama87I | CYCGRG | 1 cut(s) | 20 |
| Aor51HI | AGCGCT | 1 cut(s) | 166 |
| ApeKI | GCWGC | 1 cut(s) | 167 |
| AspLEI | GCGC | 1 cut(s) | 167 |
| AspS9I | GGNCC | 2 cut(s) | 45, 87 |
| AsuC2I | CCSGG | 3 cut(s) | 21, 22, 218 |
| AsuHPI | GGTGA | 1 cut(s) | 106 |
| AvaI | CYCGRG | 1 cut(s) | 20 |
| AvaII | GGWCC | 2 cut(s) | 45, 87 |
| BanI | GGYRCC | 2 cut(s) | 53, 193 |
| BbvI | GCAGC | 1 cut(s) | 154 |
| BciT130I | CCWGG | 1 cut(s) | 91 |
| BcnI | CCSGG | 3 cut(s) | 21, 22, 218 |
| BcoDI | GTCTC | 3 cut(s) | 3, 93, 176 |
| BfoI | RGCGCY | 1 cut(s) | 168 |
| BisI | GCNGC | 3 cut(s) | 60, 168, 171 |
| BlsI | GCNGC | 3 cut(s) | 61, 169, 172 |
| Bme1390I | CCNGG | 4 cut(s) | 21, 22, 91, 218 |
| Bme18I | GGWCC | 2 cut(s) | 45, 87 |
| BmeT110I | CYCGRG | 1 cut(s) | 20 |
| BmgT120I | GGNCC | 2 cut(s) | 45, 87 |
| BmiI | GGNNCC | 3 cut(s) | 47, 55, 195 |
| BmrFI | CCNGG | 4 cut(s) | 21, 22, 91, 218 |
| BmsI | GCATC | 1 cut(s) | 142 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 215 |
| BpuMI | CCSGG | 3 cut(s) | 21, 22, 218 |
| BsaJI | CCNNGG | 4 cut(s) | 19, 20, 49, 90 |
| BseBI | CCWGG | 1 cut(s) | 91 |
| BseDI | CCNNGG | 4 cut(s) | 19, 20, 49, 90 |
| BseMII | CTCAG | 1 cut(s) | 117 |
| BseRI | GAGGAG | 1 cut(s) | 143 |
| BseXI | GCAGC | 1 cut(s) | 154 |
| BshNI | GGYRCC | 2 cut(s) | 53, 193 |
| BsiHKCI | CYCGRG | 1 cut(s) | 20 |
| BsiSI | CCGG | 2 cut(s) | 21, 217 |
| BsmAI | GTCTC | 3 cut(s) | 3, 93, 176 |
| BsoBI | CYCGRG | 1 cut(s) | 20 |
| Bsp143I | GATC | 1 cut(s) | 213 |
| BspACI | CCGC | 3 cut(s) | 57, 60, 171 |
| BspCNI | CTCAG | 1 cut(s) | 118 |
| BspLI | GGNNCC | 3 cut(s) | 47, 55, 195 |
| BspPI | GGATC | 1 cut(s) | 208 |
| BspT107I | GGYRCC | 2 cut(s) | 53, 193 |
| BssECI | CCNNGG | 4 cut(s) | 19, 20, 49, 90 |
| BssMI | GATC | 1 cut(s) | 213 |
| BssT1I | CCWWGG | 1 cut(s) | 49 |
| Bst2UI | CCWGG | 1 cut(s) | 91 |
| Bst6I | CTCTTC | 1 cut(s) | 216 |
| BstDEI | CTNAG | 1 cut(s) | 126 |
| BstH2I | RGCGCY | 1 cut(s) | 168 |
| BstHHI | GCGC | 1 cut(s) | 167 |
| BstKTI | GATC | 1 cut(s) | 216 |
| BstMAI | GTCTC | 3 cut(s) | 3, 93, 176 |
| BstMBI | GATC | 1 cut(s) | 213 |
| BstNI | CCWGG | 1 cut(s) | 91 |
| BstSCI | CCNGG | 4 cut(s) | 19, 20, 89, 216 |
| BstV1I | GCAGC | 1 cut(s) | 154 |
| BtsIMutI | CAGTG | 1 cut(s) | 123 |
| CfoI | GCGC | 1 cut(s) | 167 |
| Cfr13I | GGNCC | 2 cut(s) | 45, 87 |
| Cfr9I | CCCGGG | 1 cut(s) | 20 |
| CviAII | CATG | 1 cut(s) | 103 |
| CviJI | RGCY | 1 cut(s) | 16 |
| CviKI_1 | RGCY | 1 cut(s) | 16 |
| DdeI | CTNAG | 1 cut(s) | 126 |
| DpnI | GATC | 1 cut(s) | 215 |
| DpnII | GATC | 1 cut(s) | 213 |
| Eam1104I | CTCTTC | 1 cut(s) | 216 |
| EarI | CTCTTC | 1 cut(s) | 216 |
| Eco130I | CCWWGG | 1 cut(s) | 49 |
| Eco47I | GGWCC | 2 cut(s) | 45, 87 |
| Eco47III | AGCGCT | 1 cut(s) | 166 |
| Eco88I | CYCGRG | 1 cut(s) | 20 |
| EcoRII | CCWGG | 1 cut(s) | 89 |
| EcoT14I | CCWWGG | 1 cut(s) | 49 |
| ErhI | CCWWGG | 1 cut(s) | 49 |
| FaeI | CATG | 1 cut(s) | 106 |
| FaiI | YATR | 2 cut(s) | 104, 116 |
| FatI | CATG | 1 cut(s) | 102 |
| Fnu4HI | GCNGC | 3 cut(s) | 60, 168, 171 |
| Fsp4HI | GCNGC | 3 cut(s) | 60, 168, 171 |
| GlaI | GCGC | 1 cut(s) | 166 |
| GluI | GCNGC | 3 cut(s) | 60, 168, 171 |
| HaeII | RGCGCY | 1 cut(s) | 168 |
| HapII | CCGG | 2 cut(s) | 21, 217 |
| HhaI | GCGC | 1 cut(s) | 167 |
| Hin1II | CATG | 1 cut(s) | 106 |
| Hin6I | GCGC | 1 cut(s) | 165 |
| HinP1I | GCGC | 1 cut(s) | 165 |
| HinfI | GANTC | 3 cut(s) | 31, 176, 200 |
| HpaII | CCGG | 2 cut(s) | 21, 217 |
| HphI | GGTGA | 1 cut(s) | 106 |
| Hpy188I | TCNGA | 2 cut(s) | 181, 205 |
| Hpy188III | TCNNGA | 2 cut(s) | 43, 85 |
| HpyF3I | CTNAG | 1 cut(s) | 126 |
| Hsp92II | CATG | 1 cut(s) | 106 |
| HspAI | GCGC | 1 cut(s) | 165 |
| Kzo9I | GATC | 1 cut(s) | 213 |
| LmnI | GCTCC | 1 cut(s) | 130 |
| LpnPI | CCDG | 7 cut(s) | 28, 34, 70, 76, 103, 210, 230 |
| Lsp1109I | GCAGC | 1 cut(s) | 154 |
| LweI | GCATC | 1 cut(s) | 142 |
| MalI | GATC | 1 cut(s) | 215 |
| MboI | GATC | 1 cut(s) | 213 |
| MboII | GAAGA | 2 cut(s) | 40, 233 |
| MlyI | GAGTC | 1 cut(s) | 170 |
| MnlI | CCTC | 1 cut(s) | 121 |
| MslI | CAYNNNNRTG | 1 cut(s) | 113 |
| MspA1I | CMGCKG | 1 cut(s) | 62 |
| MspI | CCGG | 2 cut(s) | 21, 217 |
| MspR9I | CCNGG | 4 cut(s) | 21, 22, 91, 218 |
| MvaI | CCWGG | 1 cut(s) | 91 |
| NciI | CCSGG | 3 cut(s) | 21, 22, 218 |
| NdeII | GATC | 1 cut(s) | 213 |
| NlaIII | CATG | 1 cut(s) | 106 |
| NlaIV | GGNNCC | 3 cut(s) | 47, 55, 195 |
| PfeI | GAWTC | 2 cut(s) | 31, 200 |
| PfoI | TCCNGGA | 1 cut(s) | 216 |
| PkrI | GCNGC | 3 cut(s) | 61, 169, 172 |
| PleI | GAGTC | 1 cut(s) | 170 |
| PpsI | GAGTC | 1 cut(s) | 170 |
| Psp6I | CCWGG | 1 cut(s) | 89 |
| PspGI | CCWGG | 1 cut(s) | 89 |
| PspN4I | GGNNCC | 3 cut(s) | 47, 55, 195 |
| PspPI | GGNCC | 2 cut(s) | 45, 87 |
| RseI | CAYNNNNRTG | 1 cut(s) | 113 |
| SatI | GCNGC | 3 cut(s) | 60, 168, 171 |
| Sau3AI | GATC | 1 cut(s) | 213 |
| Sau96I | GGNCC | 2 cut(s) | 45, 87 |
| SchI | GAGTC | 1 cut(s) | 170 |
| ScrFI | CCNGG | 4 cut(s) | 21, 22, 91, 218 |
| SfaNI | GCATC | 1 cut(s) | 142 |
| SinI | GGWCC | 2 cut(s) | 45, 87 |
| SmaI | CCCGGG | 1 cut(s) | 22 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 113 |
| SsiI | CCGC | 3 cut(s) | 57, 60, 171 |
| StyD4I | CCNGG | 4 cut(s) | 19, 20, 89, 216 |
| StyI | CCWWGG | 1 cut(s) | 49 |
| TauI | GCSGC | 2 cut(s) | 62, 173 |
| TfiI | GAWTC | 2 cut(s) | 31, 200 |
| TscAI | CASTG | 1 cut(s) | 130 |
| TseI | GCWGC | 1 cut(s) | 167 |
| TspDTI | ATGAA | 1 cut(s) | 131 |
| TspMI | CCCGGG | 1 cut(s) | 20 |
| TspRI | CASTG | 1 cut(s) | 130 |
| VpaK11BI | GGWCC | 2 cut(s) | 45, 87 |
| XmaI | CCCGGG | 1 cut(s) | 20 |