Domain of unknown function (DUF2828)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 276 |
| AciI | CCGC | 1 cut(s) | 63 |
| AfeI | AGCGCT | 1 cut(s) | 231 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 151 |
| AgsI | TTSAA | 3 cut(s) | 16, 49, 220 |
| Aor51HI | AGCGCT | 1 cut(s) | 231 |
| AoxI | GGCC | 1 cut(s) | 153 |
| ApaI | GGGCCC | 1 cut(s) | 157 |
| ApeKI | GCWGC | 1 cut(s) | 227 |
| AspLEI | GCGC | 1 cut(s) | 232 |
| AspS9I | GGNCC | 2 cut(s) | 153, 154 |
| BaeGI | GKGCMC | 1 cut(s) | 157 |
| BanII | GRGCYC | 1 cut(s) | 157 |
| BbvI | GCAGC | 1 cut(s) | 239 |
| BfaI | CTAG | 1 cut(s) | 263 |
| BfmI | CTRYAG | 1 cut(s) | 225 |
| BfoI | RGCGCY | 1 cut(s) | 233 |
| BisI | GCNGC | 1 cut(s) | 228 |
| BlsI | GCNGC | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 2 cut(s) | 153, 154 |
| BmiI | GGNNCC | 2 cut(s) | 155, 239 |
| BmsI | GCATC | 1 cut(s) | 140 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 44, 76 |
| Bpu10I | CCTNAGC | 1 cut(s) | 233 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 151 |
| BseGI | GGATG | 1 cut(s) | 131 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 151 |
| BseSI | GKGCMC | 1 cut(s) | 157 |
| BseXI | GCAGC | 1 cut(s) | 239 |
| BshFI | GGCC | 1 cut(s) | 155 |
| BsiSI | CCGG | 2 cut(s) | 81, 128 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 151 |
| BsnI | GGCC | 1 cut(s) | 155 |
| Bsp120I | GGGCCC | 1 cut(s) | 153 |
| Bsp1286I | GDGCHC | 1 cut(s) | 157 |
| Bsp143I | GATC | 1 cut(s) | 97 |
| BspACI | CCGC | 1 cut(s) | 63 |
| BspANI | GGCC | 1 cut(s) | 155 |
| BspLI | GGNNCC | 2 cut(s) | 155, 239 |
| BspMAI | CTGCAG | 1 cut(s) | 229 |
| BssMI | GATC | 1 cut(s) | 97 |
| Bst6I | CTCTTC | 2 cut(s) | 82, 107 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 90 |
| BstC8I | GCNNGC | 1 cut(s) | 268 |
| BstDEI | CTNAG | 1 cut(s) | 233 |
| BstF5I | GGATG | 1 cut(s) | 131 |
| BstH2I | RGCGCY | 1 cut(s) | 233 |
| BstHHI | GCGC | 1 cut(s) | 232 |
| BstKTI | GATC | 1 cut(s) | 100 |
| BstMBI | GATC | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 90, 244 |
| BstSFI | CTRYAG | 1 cut(s) | 225 |
| BstSLI | GKGCMC | 1 cut(s) | 157 |
| BstV1I | GCAGC | 1 cut(s) | 239 |
| BsuRI | GGCC | 1 cut(s) | 155 |
| BtsCI | GGATG | 1 cut(s) | 131 |
| BtsI | GCAGTG | 1 cut(s) | 222 |
| BtsIMutI | CAGTG | 1 cut(s) | 222 |
| Cac8I | GCNNGC | 1 cut(s) | 268 |
| CfoI | GCGC | 1 cut(s) | 232 |
| Cfr13I | GGNCC | 2 cut(s) | 153, 154 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 131, 166 |
| CviJI | RGCY | 5 cut(s) | 22, 45, 155, 238, 266 |
| CviKI_1 | RGCY | 5 cut(s) | 22, 45, 155, 238, 266 |
| DdeI | CTNAG | 1 cut(s) | 233 |
| DpnI | GATC | 1 cut(s) | 99 |
| DpnII | GATC | 1 cut(s) | 97 |
| Eam1104I | CTCTTC | 2 cut(s) | 82, 107 |
| EarI | CTCTTC | 2 cut(s) | 82, 107 |
| EciI | GGCGGA | 1 cut(s) | 52 |
| Eco24I | GRGCYC | 1 cut(s) | 157 |
| Eco47III | AGCGCT | 1 cut(s) | 231 |
| EcoT38I | GRGCYC | 1 cut(s) | 157 |
| FaiI | YATR | 1 cut(s) | 116 |
| FblI | GTMKAC | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 1 cut(s) | 228 |
| FokI | GGATG | 1 cut(s) | 118 |
| FriOI | GRGCYC | 1 cut(s) | 157 |
| Fsp4HI | GCNGC | 1 cut(s) | 228 |
| FspBI | CTAG | 1 cut(s) | 263 |
| GlaI | GCGC | 1 cut(s) | 231 |
| GluI | GCNGC | 1 cut(s) | 228 |
| HaeII | RGCGCY | 1 cut(s) | 233 |
| HaeIII | GGCC | 1 cut(s) | 155 |
| HapII | CCGG | 2 cut(s) | 81, 128 |
| HhaI | GCGC | 1 cut(s) | 232 |
| Hin6I | GCGC | 1 cut(s) | 230 |
| HinP1I | GCGC | 1 cut(s) | 230 |
| HincII | GTYRAC | 1 cut(s) | 277 |
| HindII | GTYRAC | 1 cut(s) | 277 |
| HinfI | GANTC | 1 cut(s) | 161 |
| HpaII | CCGG | 2 cut(s) | 81, 128 |
| Hpy166II | GTNNAC | 2 cut(s) | 277, 301 |
| Hpy188I | TCNGA | 2 cut(s) | 198, 206 |
| Hpy8I | GTNNAC | 2 cut(s) | 277, 301 |
| Hpy99I | CGWCG | 3 cut(s) | 278, 281, 308 |
| HpyAV | CCTTC | 1 cut(s) | 207 |
| HpyCH4IV | ACGT | 2 cut(s) | 273, 279 |
| HpyCH4V | TGCA | 2 cut(s) | 227, 270 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 90, 244 |
| HpyF3I | CTNAG | 1 cut(s) | 233 |
| HpySE526I | ACGT | 2 cut(s) | 273, 279 |
| HspAI | GCGC | 1 cut(s) | 230 |
| Kzo9I | GATC | 1 cut(s) | 97 |
| LmnI | GCTCC | 1 cut(s) | 243 |
| LpnPI | CCDG | 3 cut(s) | 94, 141, 280 |
| Lsp1109I | GCAGC | 1 cut(s) | 239 |
| LweI | GCATC | 1 cut(s) | 140 |
| MaeI | CTAG | 1 cut(s) | 263 |
| MaeII | ACGT | 2 cut(s) | 273, 279 |
| MaeIII | GTNAC | 1 cut(s) | 188 |
| MalI | GATC | 1 cut(s) | 99 |
| MboI | GATC | 1 cut(s) | 97 |
| MboII | GAAGA | 3 cut(s) | 69, 94, 97 |
| MhlI | GDGCHC | 1 cut(s) | 157 |
| MlyI | GAGTC | 1 cut(s) | 155 |
| MmeI | TCCRAC | 1 cut(s) | 262 |
| MnlI | CCTC | 4 cut(s) | 83, 104, 185, 278 |
| MspI | CCGG | 2 cut(s) | 81, 128 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 90, 244 |
| NdeII | GATC | 1 cut(s) | 97 |
| NlaIV | GGNNCC | 2 cut(s) | 155, 239 |
| NmuCI | GTSAC | 1 cut(s) | 188 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 202 |
| PkrI | GCNGC | 1 cut(s) | 229 |
| PleI | GAGTC | 1 cut(s) | 155 |
| PpsI | GAGTC | 1 cut(s) | 155 |
| PspN4I | GGNNCC | 2 cut(s) | 155, 239 |
| PspOMI | GGGCCC | 1 cut(s) | 153 |
| PspPI | GGNCC | 2 cut(s) | 153, 154 |
| PstI | CTGCAG | 1 cut(s) | 229 |
| SalI | GTCGAC | 1 cut(s) | 275 |
| SatI | GCNGC | 1 cut(s) | 228 |
| Sau3AI | GATC | 1 cut(s) | 97 |
| Sau96I | GGNCC | 2 cut(s) | 153, 154 |
| SchI | GAGTC | 1 cut(s) | 155 |
| SduI | GDGCHC | 1 cut(s) | 157 |
| SetI | ASST | 4 cut(s) | 218, 276, 282, 289 |
| SfaNI | GCATC | 1 cut(s) | 140 |
| SfcI | CTRYAG | 1 cut(s) | 225 |
| SgrDI | CGTCGACG | 1 cut(s) | 275 |
| SsiI | CCGC | 1 cut(s) | 63 |
| SspMI | CTAG | 1 cut(s) | 263 |
| TaiI | ACGT | 2 cut(s) | 276, 282 |
| TaqI | TCGA | 2 cut(s) | 96, 276 |
| TscAI | CASTG | 1 cut(s) | 229 |
| TseFI | GTSAC | 1 cut(s) | 188 |
| TseI | GCWGC | 1 cut(s) | 227 |
| Tsp45I | GTSAC | 1 cut(s) | 188 |
| TspRI | CASTG | 1 cut(s) | 229 |
| XmiI | GTMKAC | 1 cut(s) | 276 |
| XspI | CTAG | 1 cut(s) | 263 |