MD14G1168300.v1.1

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0000255
Physical Location & Seq
Forward (+)
26151153 .. 26152958
1806 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1168300.v1.1.491

Sequence Viewer

Length: 1806 bp
ATGGCTAAACTACTCTCGGTAGTGAGAGCATACCAAAATCATGGCAATAAAATTTCACAACTCGCAAAAAGATTTGTTACAACTCTTGTTGATCCTCCACCTCCAGAGCTCAAATTACCCACACACACTTTCTCCGCAGCCAATTTCAATTTCGACAACTCGAAAACAAAGACACGATTAATAAACCCAATCCCATTGATTGGCTTGATTACCGGCTTGCTTAGTACCGGAAACCCCTGTGTTGATCTCTTTTTCAATGTGATTAAGCCGGAGAAAGCCAGCCCAGCCGAAGTGGAGGCCACCTGTATTTATCTGAAGCAACTGCTGCCGCTGGCCTGGTCCCGCAATCCCCTAACTACTCTCAAACTCATTTGTAATCTACGAGATGAAATGTTCTATATGGAAGCATTTGACACGGCAGCGCATTGGCTCCACCACAATCACCCGAAGACCCTAATGTGCAACATCCCTTCTATTGCCGTGTCATTCGGATGTTTTATTGATCCTGTCGAGATTTTGTACTTTCTTCTACAAGGCAGAGAAAGGAGGAGGGGGGAGGAAGAAGAGGATGATGCCACCCTAGCAGAATTGACCAAGATGGCTATCGAAAGGTATGAGCGTGACCCGAATTACAAGTTGTTACATGATAGGGTTACAGATGTTTACGTGGAACATTTGAAGTCTGATATGGAAATATTGAAGCGAAGTTTTAAGCAATCGGATATTGATGATGATGAACGGTACTCATTGGGCTTTGAGATGACTGACGCTGCTGACTGTTGCCTTTCTTCCAACTCCATGGACGCCAAAACCATCAATGCCACTTTGATATGTGAAAGCATTGCAAGGAAGTTTTTTCCCCGAGAATCATATCCAGAATATCAAGGTATTGATGACGCTCAATACGCTGAAAAAATTGAAAACCGGCTCAGGAAGGAGGTTTTGGATCCCCTGGACAAGGCCAGCAGATGTGGACGCCCCAAAAAGCAAGGAAAGCTCTGCGAGGTTGAGACGTATTTGGAGGAGGTGAAAGCGGACAAGTCCAAGATTGAACCCGGTGCTTTGCTTCCACCCCAGATCATGGCCTTTGCGGATCATCCCAATGTTGGGGAAGTGGCTGAGCTTCAATGGAAAACAATGGTGGAGAACATGAAAAAACAAGGCAAGATGAAAAACTGTTTGGCTGTATGTGACAACTGCATAAAATTCATAAGGGGAAAGGCAACTGAGGTCTCGCTGGCTTTGGGACTTTTGGTGTCTGAATTGACCCAAGGGCCATGGAACGGAAAGGTGGTCAGTTGGCACTCAACTCTACAAACGATACAAGGCCATGATCTAAAGTCCAAGTCCAAGTTTGTGACGATGATGGATTTCGAGGTCACGGGAGAAGACGAACTTGTTATTGAGAAAGCGTTTGACTCGATTTTGGAACTGGCAGTGAATGAGAATTTGCGGCCAGAGCAGATGGTCAAGAAGGTGTTTGTGTTCAGCAAGCAAGAATTTAGCCATGAAGCTTATTCCTTATGGGAAGATGATTACAATGAAATAAAGAGGAAGTTTGAGGCAAAAGGGTACGGCGATGCGGTGCCACACATAGTGATTTGGTTTATGTCAGATGATTGCTTCGATTCGGAACCAGAGAAGATAGGGATGCCTTGGACACAACGGGGGATGACTATGTTGAGTGGCTTCTCTGAAAATTTGCTCAAGTTGTTATTGGAGAATGAAGGGGAAATTGGCCCAGAGCATGTCATGGAAGCAGCCATCTCTGAAGAAAAATATCAAAAGCTGGCTGTAGTGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

602

Amino Acids

68.5

Weight (kDa)

5.29

Isoelectric Point (pI)

38.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 73 - 181 1.4e-21 Domain of unknown function (DUF2828)
DUF2828 PF11443 188 - 324 1.1e-19 Domain of unknown function (DUF2828)
DUF2828 PF11443 336 - 390 1e-06 Domain of unknown function (DUF2828)
DUF7788 PF25043 392 - 590 7.5e-40 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1585
AccB7I CCANNNNNTGG 2 cut(s) 200, 1081
AciI CCGC 7 cut(s) 135, 329, 343, 1034, 1091, 1453, 1583
AclWI GGATC 5 cut(s) 86, 497, 941, 954, 1101
AcoI YGGCCR 1 cut(s) 1454
AcsI RAATTY 5 cut(s) 51, 1205, 1447, 1499, 1699
AcuI CTGAAG 2 cut(s) 335, 1791
AcyI GRCGYC 2 cut(s) 804, 976
AdeI CACNNNGTG 1 cut(s) 1597
AfaI GTAC 4 cut(s) 226, 521, 743, 1574
AfiI CCNNNNNNNGG 6 cut(s) 200, 958, 1081, 1106, 1107, 1283
AgsI TTSAA 7 cut(s) 148, 256, 679, 700, 920, 1052, 1127
AjnI CCWGG 2 cut(s) 335, 951
AjuI GAANNNNNNNTTGG 8 cut(s) 134, 166, 926, 958, 1163, 1195, 1719, 1751
AluBI AGCT 5 cut(s) 109, 997, 1123, 1514, 1789
AluI AGCT 5 cut(s) 109, 997, 1123, 1514, 1789
Alw21I GWGCWC 1 cut(s) 111
Alw26I GTCTC 2 cut(s) 1004, 1237
AlwI GGATC 5 cut(s) 86, 497, 941, 954, 1101
Ama87I CYCGRG 1 cut(s) 861
AoxI GGCC 8 cut(s) 297, 333, 960, 1083, 1274, 1327, 1454, 1738
ApeKI GCWGC 5 cut(s) 137, 325, 419, 770, 1760
ApoI RAATTY 5 cut(s) 51, 1205, 1447, 1499, 1699
AseI ATTAAT 1 cut(s) 179
AspLEI GCGC 1 cut(s) 424
AspS9I GGNCC 3 cut(s) 339, 1274, 1739
AsuC2I CCSGG 1 cut(s) 1056
AsuHPI GGTGA 2 cut(s) 434, 1039
AvaI CYCGRG 1 cut(s) 861
AvaII GGWCC 1 cut(s) 339
BamHI GGATCC 1 cut(s) 946
BanI GGYRCC 1 cut(s) 1585
BanII GRGCYC 1 cut(s) 111
BbsI GAAGAC 2 cut(s) 455, 1395
Bbv12I GWGCWC 1 cut(s) 111
BbvI GCAGC 5 cut(s) 149, 312, 431, 757, 1772
BccI CCATC 5 cut(s) 592, 821, 1360, 1459, 1772
BceAI ACGGC 3 cut(s) 432, 464, 1591
BciT130I CCWGG 2 cut(s) 337, 953
BcnI CCSGG 1 cut(s) 1056
BcoDI GTCTC 2 cut(s) 1004, 1237
BfaI CTAG 1 cut(s) 581
BfmI CTRYAG 1 cut(s) 1794
BisI GCNGC 7 cut(s) 138, 326, 329, 420, 771, 1454, 1761
BlpI GCTNAGC 1 cut(s) 1119
BlsI GCNGC 7 cut(s) 139, 327, 330, 421, 772, 1455, 1762
Bme1390I CCNGG 3 cut(s) 337, 953, 1056
Bme18I GGWCC 1 cut(s) 339
BmeT110I CYCGRG 1 cut(s) 861
BmgT120I GGNCC 3 cut(s) 339, 1274, 1739
BmiI GGNNCC 5 cut(s) 341, 431, 948, 1587, 1635
BmrFI CCNGG 3 cut(s) 337, 953, 1056
BmsI GCATC 3 cut(s) 562, 1570, 1641
BpiI GAAGAC 2 cut(s) 455, 1395
BpmI CTGGAG 1 cut(s) 87
Bpu10I CCTNAGC 1 cut(s) 929
Bpu1102I GCTNAGC 1 cut(s) 1119
BpuEI CTTGAG 1 cut(s) 1691
BpuMI CCSGG 1 cut(s) 1056
BsaAI YACGTR 1 cut(s) 667
BsaBI GATNNNNATC 1 cut(s) 602
BsaHI GRCGYC 2 cut(s) 804, 976
BsaI GGTCTC 1 cut(s) 1237
BsaJI CCNNGG 5 cut(s) 798, 951, 1270, 1277, 1655
BsaWI WCCGGW 1 cut(s) 227
BsaXI ACNNNNNCTCC 2 cut(s) 116, 146
Bsc4I CCNNNNNNNGG 6 cut(s) 200, 958, 1081, 1106, 1107, 1283
Bse118I RCCGGY 2 cut(s) 212, 924
Bse1I ACTGG 1 cut(s) 1437
Bse3DI GCAATG 1 cut(s) 840
Bse8I GATNNNNATC 1 cut(s) 602
BseBI CCWGG 2 cut(s) 337, 953
BseDI CCNNGG 5 cut(s) 798, 951, 1270, 1277, 1655
BseGI GGATG 6 cut(s) 465, 497, 574, 1096, 1656, 1677
BseJI GATNNNNATC 1 cut(s) 602
BseLI CCNNNNNNNGG 6 cut(s) 200, 958, 1081, 1106, 1107, 1283
BseMI GCAATG 1 cut(s) 840
BseMII CTCAG 3 cut(s) 943, 1110, 1218
BseNI ACTGG 1 cut(s) 1437
BseRI GAGGAG 2 cut(s) 562, 1037
BseXI GCAGC 5 cut(s) 149, 312, 431, 757, 1772
BseYI CCCAGC 1 cut(s) 283
BshFI GGCC 8 cut(s) 299, 335, 962, 1085, 1276, 1329, 1456, 1740
BshNI GGYRCC 1 cut(s) 1585
BsiHKAI GWGCWC 1 cut(s) 111
BsiHKCI CYCGRG 1 cut(s) 861
BsiSI CCGG 5 cut(s) 213, 228, 269, 925, 1056
BslFI GGGAC 2 cut(s) 325, 1260
BslI CCNNNNNNNGG 6 cut(s) 200, 958, 1081, 1106, 1107, 1283
BsmAI GTCTC 2 cut(s) 1004, 1237
BsmBI CGTCTC 1 cut(s) 1004
BsmFI GGGAC 2 cut(s) 325, 1260
BsnI GGCC 8 cut(s) 299, 335, 962, 1085, 1276, 1329, 1456, 1740
Bso31I GGTCTC 1 cut(s) 1237
BsoBI CYCGRG 1 cut(s) 861
Bsp1286I GDGCHC 1 cut(s) 111
Bsp143I GATC 7 cut(s) 91, 244, 502, 946, 1077, 1093, 1333
Bsp1720I GCTNAGC 1 cut(s) 1119
Bsp19I CCATGG 2 cut(s) 798, 1277
BspACI CCGC 7 cut(s) 135, 329, 343, 1034, 1091, 1453, 1583
BspANI GGCC 8 cut(s) 299, 335, 962, 1085, 1276, 1329, 1456, 1740
BspCNI CTCAG 3 cut(s) 942, 1111, 1219
BspLI GGNNCC 5 cut(s) 341, 431, 948, 1587, 1635
BspPI GGATC 5 cut(s) 86, 497, 941, 954, 1101
BspT107I GGYRCC 1 cut(s) 1585
BspTNI GGTCTC 1 cut(s) 1237
BsrDI GCAATG 1 cut(s) 840
BsrFI RCCGGY 2 cut(s) 212, 924
BsrI ACTGG 1 cut(s) 1437
BssAI RCCGGY 2 cut(s) 212, 924
BssECI CCNNGG 5 cut(s) 798, 951, 1270, 1277, 1655
BssMI GATC 7 cut(s) 91, 244, 502, 946, 1077, 1093, 1333
BssNI GRCGYC 2 cut(s) 804, 976
BssT1I CCWWGG 4 cut(s) 798, 1270, 1277, 1655
Bst2UI CCWGG 2 cut(s) 337, 953
Bst4CI ACNGT 3 cut(s) 741, 779, 1178
Bst6I CTCTTC 1 cut(s) 558
BstACI GRCGYC 2 cut(s) 804, 976
BstAPI GCANNNNNTGC 1 cut(s) 325
BstBAI YACGTR 1 cut(s) 667
BstC8I GCNNGC 7 cut(s) 218, 280, 333, 964, 1239, 1493, 1791
BstDEI CTNAG 4 cut(s) 221, 929, 1119, 1227
BstDSI CCRYGG 2 cut(s) 798, 1277
BstENI CCTNNNNNAGG 1 cut(s) 956
BstF5I GGATG 6 cut(s) 465, 497, 574, 1096, 1656, 1677
BstHHI GCGC 1 cut(s) 424
BstKTI GATC 7 cut(s) 94, 247, 505, 949, 1080, 1096, 1336
BstMAI GTCTC 2 cut(s) 1004, 1237
BstMBI GATC 7 cut(s) 91, 244, 502, 946, 1077, 1093, 1333
BstMWI GCNNNNNNNGC 6 cut(s) 284, 325, 581, 905, 994, 1459
BstNI CCWGG 2 cut(s) 337, 953
BstNSI RCATGY 1 cut(s) 1751
BstSCI CCNGG 3 cut(s) 335, 951, 1054
BstSFI CTRYAG 1 cut(s) 1794
BstV1I GCAGC 5 cut(s) 149, 312, 431, 757, 1772
BstV2I GAAGAC 2 cut(s) 455, 1395
BstX2I RGATCY 1 cut(s) 946
BstXI CCANNNNNNTGG 2 cut(s) 41, 799
BstYI RGATCY 1 cut(s) 946
BsuRI GGCC 8 cut(s) 299, 335, 962, 1085, 1276, 1329, 1456, 1740
BtgI CCRYGG 2 cut(s) 798, 1277
BtgZI GCGATG 1 cut(s) 1593
BtsCI GGATG 6 cut(s) 465, 497, 574, 1096, 1656, 1677
BtsI GCAGTG 1 cut(s) 1443
BtsIMutI CAGTG 1 cut(s) 1443
Cac8I GCNNGC 7 cut(s) 218, 280, 333, 964, 1239, 1493, 1791
CfoI GCGC 1 cut(s) 424
Cfr10I RCCGGY 2 cut(s) 212, 924
Cfr13I GGNCC 3 cut(s) 339, 1274, 1739
CseI GACGC 4 cut(s) 776, 812, 905, 984
Csp6I GTAC 4 cut(s) 225, 520, 742, 1573
CviQI GTAC 4 cut(s) 225, 520, 742, 1573
DdeI CTNAG 4 cut(s) 221, 929, 1119, 1227
DpnI GATC 7 cut(s) 93, 246, 504, 948, 1079, 1095, 1335
DpnII GATC 7 cut(s) 91, 244, 502, 946, 1077, 1093, 1333
DraIII CACNNNGTG 1 cut(s) 1597
EaeI YGGCCR 1 cut(s) 1454
Eam1104I CTCTTC 1 cut(s) 558
EarI CTCTTC 1 cut(s) 558
Ecl136II GAGCTC 1 cut(s) 109
Eco130I CCWWGG 4 cut(s) 798, 1270, 1277, 1655
Eco24I GRGCYC 1 cut(s) 111
Eco31I GGTCTC 1 cut(s) 1237
Eco47I GGWCC 1 cut(s) 339
Eco53kI GAGCTC 1 cut(s) 109
Eco57I CTGAAG 2 cut(s) 335, 1791
Eco88I CYCGRG 1 cut(s) 861
EcoICRI GAGCTC 1 cut(s) 109
EcoNI CCTNNNNNAGG 1 cut(s) 956
EcoRII CCWGG 2 cut(s) 335, 951
EcoT14I CCWWGG 4 cut(s) 798, 1270, 1277, 1655
EcoT38I GRGCYC 1 cut(s) 111
ErhI CCWWGG 4 cut(s) 798, 1270, 1277, 1655
Esp3I CGTCTC 1 cut(s) 1004
FalI AAGNNNNNCTT 2 cut(s) 1380, 1412
FaqI GGGAC 2 cut(s) 325, 1260
FauI CCCGC 1 cut(s) 350
Fnu4HI GCNGC 7 cut(s) 138, 326, 329, 420, 771, 1454, 1761
FokI GGATG 6 cut(s) 452, 504, 581, 1083, 1663, 1684
FriOI GRGCYC 1 cut(s) 111
Fsp4HI GCNGC 7 cut(s) 138, 326, 329, 420, 771, 1454, 1761
FspBI CTAG 1 cut(s) 581
GlaI GCGC 1 cut(s) 423
GluI GCNGC 7 cut(s) 138, 326, 329, 420, 771, 1454, 1761
GsaI CCCAGC 1 cut(s) 287
GsuI CTGGAG 1 cut(s) 87
HaeIII GGCC 8 cut(s) 299, 335, 962, 1085, 1276, 1329, 1456, 1740
HapII CCGG 5 cut(s) 213, 228, 269, 925, 1056
HgaI GACGC 4 cut(s) 776, 812, 905, 984
HhaI GCGC 1 cut(s) 424
Hin1I GRCGYC 2 cut(s) 804, 976
Hin6I GCGC 1 cut(s) 422
HinP1I GCGC 1 cut(s) 422
HindIII AAGCTT 1 cut(s) 1512
HinfI GANTC 3 cut(s) 866, 1418, 1628
HpaII CCGG 5 cut(s) 213, 228, 269, 925, 1056
HphI GGTGA 2 cut(s) 434, 1039
Hpy166II GTNNAC 3 cut(s) 664, 974, 1801
Hpy188I TCNGA 9 cut(s) 315, 491, 685, 721, 1261, 1615, 1633, 1696, 1771
Hpy188III TCNNGA 5 cut(s) 104, 511, 875, 931, 1471
Hpy8I GTNNAC 3 cut(s) 664, 974, 1801
HpyAV CCTTC 4 cut(s) 480, 928, 1468, 1721
HpyCH4III ACNGT 3 cut(s) 741, 779, 1178
HpyCH4IV ACGT 2 cut(s) 666, 1013
HpyCH4V TGCA 3 cut(s) 462, 845, 1200
HpyF10VI GCNNNNNNNGC 6 cut(s) 284, 325, 581, 905, 994, 1459
HpyF3I CTNAG 4 cut(s) 221, 929, 1119, 1227
HpySE526I ACGT 2 cut(s) 666, 1013
Hsp92I GRCGYC 2 cut(s) 804, 976
HspAI GCGC 1 cut(s) 422
Kzo9I GATC 7 cut(s) 91, 244, 502, 946, 1077, 1093, 1333
LmnI GCTCC 1 cut(s) 435
Lsp1109I GCAGC 5 cut(s) 149, 312, 431, 757, 1772
LweI GCATC 3 cut(s) 562, 1570, 1641
MaeI CTAG 1 cut(s) 581
MaeII ACGT 2 cut(s) 666, 1013
MaeIII GTNAC 7 cut(s) 76, 620, 639, 652, 1190, 1357, 1378
MalI GATC 7 cut(s) 93, 246, 504, 948, 1079, 1095, 1335
MboI GATC 7 cut(s) 91, 244, 502, 946, 1077, 1093, 1333
MboII GAAGA 9 cut(s) 460, 518, 572, 575, 780, 1400, 1541, 1654, 1784
MflI RGATCY 1 cut(s) 946
MhlI GDGCHC 1 cut(s) 111
MlyI GAGTC 1 cut(s) 1412
MmeI TCCRAC 1 cut(s) 816
MseI TTAA 3 cut(s) 179, 264, 711
MslI CAYNNNNRTG 2 cut(s) 490, 1101
MspA1I CMGCKG 1 cut(s) 331
MspI CCGG 5 cut(s) 213, 228, 269, 925, 1056
MspR9I CCNGG 3 cut(s) 337, 953, 1056
MvaI CCWGG 2 cut(s) 337, 953
MwoI GCNNNNNNNGC 6 cut(s) 284, 325, 581, 905, 994, 1459
NciI CCSGG 1 cut(s) 1056
NcoI CCATGG 2 cut(s) 798, 1277
NdeII GATC 7 cut(s) 91, 244, 502, 946, 1077, 1093, 1333
NlaIV GGNNCC 5 cut(s) 341, 431, 948, 1587, 1635
NmuCI GTSAC 4 cut(s) 620, 1190, 1357, 1378
NspI RCATGY 1 cut(s) 1751
PfeI GAWTC 2 cut(s) 866, 1628
PflMI CCANNNNNTGG 2 cut(s) 200, 1081
PkrI GCNGC 7 cut(s) 139, 327, 330, 421, 772, 1455, 1762
PleI GAGTC 1 cut(s) 1412
PpsI GAGTC 1 cut(s) 1412
Ppu21I YACGTR 1 cut(s) 667
PshBI ATTAAT 1 cut(s) 179
Psp124BI GAGCTC 1 cut(s) 111
Psp6I CCWGG 2 cut(s) 335, 951
PspFI CCCAGC 1 cut(s) 283
PspGI CCWGG 2 cut(s) 335, 951
PspN4I GGNNCC 5 cut(s) 341, 431, 948, 1587, 1635
PspPI GGNCC 3 cut(s) 339, 1274, 1739
PsuI RGATCY 1 cut(s) 946
RsaI GTAC 4 cut(s) 226, 521, 743, 1574
RsaNI GTAC 4 cut(s) 225, 520, 742, 1573
RseI CAYNNNNRTG 2 cut(s) 490, 1101
SacI GAGCTC 1 cut(s) 111
SaqAI TTAA 3 cut(s) 179, 264, 711
SatI GCNGC 7 cut(s) 138, 326, 329, 420, 771, 1454, 1761
Sau3AI GATC 7 cut(s) 91, 244, 502, 946, 1077, 1093, 1333
Sau96I GGNCC 3 cut(s) 339, 1274, 1739
SchI GAGTC 1 cut(s) 1412
ScrFI CCNGG 3 cut(s) 337, 953, 1056
SduI GDGCHC 1 cut(s) 111
SfaNI GCATC 3 cut(s) 562, 1570, 1641
SfcI CTRYAG 1 cut(s) 1794
SinI GGWCC 1 cut(s) 339
SmiMI CAYNNNNRTG 2 cut(s) 490, 1101
SmlI CTYRAG 1 cut(s) 1706
SmoI CTYRAG 1 cut(s) 1706
SsiI CCGC 7 cut(s) 135, 329, 343, 1034, 1091, 1453, 1583
SspI AATATT 1 cut(s) 696
SspMI CTAG 1 cut(s) 581
SstI GAGCTC 1 cut(s) 111
StyD4I CCNGG 3 cut(s) 335, 951, 1054
StyI CCWWGG 4 cut(s) 798, 1270, 1277, 1655
TaaI ACNGT 3 cut(s) 741, 779, 1178
TaiI ACGT 2 cut(s) 669, 1016
TaqI TCGA 7 cut(s) 153, 161, 510, 606, 1374, 1421, 1626
TatI WGTACW 1 cut(s) 519
TauI GCSGC 2 cut(s) 331, 1456
TfiI GAWTC 2 cut(s) 866, 1628
Tru1I TTAA 3 cut(s) 179, 264, 711
Tru9I TTAA 3 cut(s) 179, 264, 711
TscAI CASTG 1 cut(s) 1443
TseFI GTSAC 4 cut(s) 620, 1190, 1357, 1378
TseI GCWGC 5 cut(s) 137, 325, 419, 770, 1760
Tsp45I GTSAC 4 cut(s) 620, 1190, 1357, 1378
TspDTI ATGAA 8 cut(s) 402, 750, 1166, 1184, 1198, 1524, 1557, 1740
TspGWI ACGGA 1 cut(s) 1299
TspRI CASTG 1 cut(s) 1443
Van91I CCANNNNNTGG 2 cut(s) 200, 1081
VpaK11BI GGWCC 1 cut(s) 339
VspI ATTAAT 1 cut(s) 179
XagI CCTNNNNNAGG 1 cut(s) 956
XapI RAATTY 5 cut(s) 51, 1205, 1447, 1499, 1699
XceI RCATGY 1 cut(s) 1751
XspI CTAG 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.