Rh7CG071700

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000255
Physical Location & Seq
Reverse (-)
5097910 .. 5099467
1558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG071700.1

Sequence Viewer

Length: 1344 bp
ATGGAGAGGGCAAAATCGGAAAAGGAAAAGGCCTCTGCTTTGAGGAAGGAGAAGTTCGCAGCCATGGCCAAGAAGGCTGTTGAGAGGTACCAGCGTGACCCGGACTACAGATTCTTGCACGAACGGGTTTCGGATCTTTTCGCAGAGTGCTTGAAATCGGATATGGAGAATTTGAAGTCCAATCAGTACTACAAGAAGATTAGCCTTGCGGCGAAATGGTGTCCTTCTCTGGACTCGTCTTTTGATCGAGCCACACTGCTCTGTGAGAGCATTGCCAGGAAGGTTTTCGCAAGAGAATCGCATCCGGAATATGAAGGAATTGAGGATGCACATTATGCTTATAGAGTCCGAGACCGGCTGAGGAAGGATGTGTTGGTGCCATTGAGGATAGTGTTGGAGTTGCCGGAGGTTTACATGGGTGCCAATCTGTGGGGTGCCATTCCTTACAACAGAGTGGCCTCTGTGGCGATGAAGCTTTACAAGGAGAAGTTCTTGAAGCATGATGAGGAGAGGTTTAAGAAGTATTTGGAGGATGTCAAGGCCGGGAAGTCTACTATTGCGGCAGGTGCGCTGCTTCCGCATGAGATCATAGCCTCTCTGAATGATGGGGATGGAGGGCAGGTGGCCGAGCTTCAGTGGAAGAGAGTGGTGGATGACTTGTTGAAGGAGGGCACGATGAAGAACTGCTTGGCTGTGTGTGATGTGTCCGGAAGCATGGATGGGACTCCTATGGATGTGTGTGTTGCTTTGGGAATGTTGGTGGCTGAGTTGAATGAGGAGCCATGGAAAGGGAAGGTGATCACATTCAGTGCCGATCCTCAGCTTCACTTGATACAAGGCAATGATCTAAGCTCCAAGTCTGAGTTTGTGAAGCGAATGGACTGGGGAGGCAACACTGATTTTCAGAAGGTGTTTGATTTGATCCTCCAAGTGGCTGTGAAGGGGAATCTGAAGCCGGAGCAAATGATTAAGAGGGTGTTTGTTTTCAGTGACATGGAATTTGATCAGGCTTCGGGTTATGCTTATGGAGGATATGGATATAGATATGGGCGGTACGGAAGTAATGATGTTCCAAGGGGATGGGAGACTGATTATGAGGTGATTCAGAGGAAGTACAGGGAGAAAGGGTATGGTGATGCGGTGCCACAGATAGTTTTTTGGAATCTAAGGGACTCGAAGGCTACCCCCGTGCCTGGGACTCAACCAGGAGTGGCGCTACTGAGTGGCTTCTCCAAGAATTTGCTCAAGCTCTTCTTGGATAATGATGGGGAGATTCGCCCTGACACAACCATGGAAGCAGCAATCTCGGGTCCAGAGTATCAGAAGCTGGTTGTGCTGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

447

Amino Acids

50.69

Weight (kDa)

6.39

Isoelectric Point (pI)

24.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 2 - 226 5.5e-88 Domain of unknown function (DUF2828)
DUF7788 PF25043 228 - 426 1.3e-78 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 554, 610
Acc36I ACCTGC 2 cut(s) 554, 610
Acc65I GGTACC 1 cut(s) 87
AccB1I GGYRCC 5 cut(s) 87, 376, 419, 434, 1141
AccB7I CCANNNNNTGG 1 cut(s) 429
AccI GTMKAC 1 cut(s) 551
AccIII TCCGGA 2 cut(s) 304, 707
AciI CCGC 5 cut(s) 209, 560, 578, 1051, 1139
AclWI GGATC 3 cut(s) 141, 809, 916
AcoI YGGCCR 2 cut(s) 66, 624
AcsI RAATTY 3 cut(s) 169, 998, 1237
AcuI CTGAAG 2 cut(s) 617, 971
AfaI GTAC 4 cut(s) 89, 188, 1055, 1115
AfiI CCNNNNNNNGG 5 cut(s) 429, 788, 931, 1193, 1194
AgsI TTSAA 5 cut(s) 154, 175, 496, 664, 772
AjnI CCWGG 3 cut(s) 275, 1192, 1204
AjuI GAANNNNNNNTTGG 4 cut(s) 356, 388, 671, 703
AluBI AGCT 6 cut(s) 475, 631, 823, 852, 1249, 1327
AluI AGCT 6 cut(s) 475, 631, 823, 852, 1249, 1327
Alw26I GTCTC 2 cut(s) 345, 1079
AlwI GGATC 3 cut(s) 141, 809, 916
AlwNI CAGNNNCTG 1 cut(s) 1327
Ama87I CYCGRG 1 cut(s) 1306
Aor13HI TCCGGA 2 cut(s) 304, 707
AoxI GGCC 5 cut(s) 30, 66, 456, 540, 624
ApeKI GCWGC 3 cut(s) 59, 571, 1298
ApoI RAATTY 3 cut(s) 169, 998, 1237
ArsI GACNNNNNNTTYG 4 cut(s) 224, 256, 983, 1015
Asp700I GAANNNNTTC 1 cut(s) 284
Asp718I GGTACC 1 cut(s) 87
AspLEI GCGC 2 cut(s) 571, 1216
AspS9I GGNCC 1 cut(s) 1310
AsuC2I CCSGG 2 cut(s) 101, 544
AsuHPI GGTGA 3 cut(s) 808, 1111, 1145
AvaI CYCGRG 1 cut(s) 1306
AvaII GGWCC 1 cut(s) 1310
BaeGI GKGCMC 1 cut(s) 674
BaeI ACNNNNGTAYC 4 cut(s) 79, 112, 1045, 1078
BalI TGGCCA 1 cut(s) 68
BanI GGYRCC 5 cut(s) 87, 376, 419, 434, 1141
BbvCI CCTCAGC 2 cut(s) 359, 819
BbvI GCAGC 3 cut(s) 71, 558, 1310
BccI CCATC 5 cut(s) 599, 605, 713, 1074, 1259
BcgI CGANNNNNNTGC 4 cut(s) 279, 313, 1287, 1321
BciT130I CCWGG 3 cut(s) 277, 1194, 1206
BclI TGATCA 2 cut(s) 798, 1003
BcnI CCSGG 2 cut(s) 101, 544
BcoDI GTCTC 2 cut(s) 345, 1079
BfmI CTRYAG 1 cut(s) 106
BfoI RGCGCY 1 cut(s) 1217
BfuAI ACCTGC 2 cut(s) 554, 610
BglI GCCNNNNNGGC 2 cut(s) 74, 464
BisI GCNGC 5 cut(s) 60, 210, 561, 572, 1299
BlsI GCNGC 5 cut(s) 61, 211, 562, 573, 1300
BmcAI AGTACT 1 cut(s) 188
Bme1390I CCNGG 5 cut(s) 101, 277, 544, 1194, 1206
Bme18I GGWCC 1 cut(s) 1310
BmeT110I CYCGRG 1 cut(s) 1306
BmgT120I GGNCC 1 cut(s) 1310
BmiI GGNNCC 7 cut(s) 89, 378, 421, 436, 780, 1143, 1311
BmrFI CCNGG 5 cut(s) 101, 277, 544, 1194, 1206
BmrI ACTGGG 1 cut(s) 892
BmsI GCATC 3 cut(s) 310, 316, 1126
BmuI ACTGGG 1 cut(s) 892
Bpu10I CCTNAGC 2 cut(s) 359, 819
BpuEI CTTGAG 1 cut(s) 1229
BpuMI CCSGG 2 cut(s) 101, 544
BsaI GGTCTC 1 cut(s) 345
BsaJI CCNNGG 5 cut(s) 63, 782, 1073, 1193, 1290
BsaWI WCCGGW 2 cut(s) 304, 707
BsaXI ACNNNNNCTCC 4 cut(s) 606, 636, 1112, 1142
Bsc4I CCNNNNNNNGG 5 cut(s) 429, 788, 931, 1193, 1194
Bse118I RCCGGY 1 cut(s) 354
Bse1I ACTGG 1 cut(s) 887
Bse3DI GCAATG 2 cut(s) 270, 847
BseAI TCCGGA 2 cut(s) 304, 707
BseBI CCWGG 3 cut(s) 277, 1194, 1206
BseDI CCNNGG 5 cut(s) 63, 782, 1073, 1193, 1290
BseGI GGATG 9 cut(s) 301, 331, 373, 538, 616, 658, 724, 739, 1085
BseLI CCNNNNNNNGG 5 cut(s) 429, 788, 931, 1193, 1194
BseMI GCAATG 2 cut(s) 270, 847
BseMII CTCAG 5 cut(s) 350, 756, 833, 852, 1211
BseNI ACTGG 1 cut(s) 887
BseRI GAGGAG 2 cut(s) 521, 791
BseSI GKGCMC 1 cut(s) 674
BseXI GCAGC 3 cut(s) 71, 558, 1310
BshFI GGCC 5 cut(s) 32, 68, 458, 542, 626
BshNI GGYRCC 5 cut(s) 87, 376, 419, 434, 1141
BsiHKCI CYCGRG 1 cut(s) 1306
BsiSI CCGG 7 cut(s) 101, 305, 355, 404, 543, 708, 956
BslFI GGGAC 3 cut(s) 736, 1184, 1210
BslI CCNNNNNNNGG 5 cut(s) 429, 788, 931, 1193, 1194
BsmAI GTCTC 2 cut(s) 345, 1079
BsmFI GGGAC 3 cut(s) 736, 1184, 1210
BsnI GGCC 5 cut(s) 32, 68, 458, 542, 626
Bso31I GGTCTC 1 cut(s) 345
BsoBI CYCGRG 1 cut(s) 1306
Bsp1286I GDGCHC 1 cut(s) 674
Bsp13I TCCGGA 2 cut(s) 304, 707
Bsp143I GATC 8 cut(s) 133, 244, 585, 798, 814, 844, 921, 1003
Bsp19I CCATGG 3 cut(s) 63, 782, 1290
BspACI CCGC 5 cut(s) 209, 560, 578, 1051, 1139
BspANI GGCC 5 cut(s) 32, 68, 458, 542, 626
BspCNI CTCAG 5 cut(s) 351, 757, 832, 853, 1212
BspEI TCCGGA 2 cut(s) 304, 707
BspLI GGNNCC 7 cut(s) 89, 378, 421, 436, 780, 1143, 1311
BspMI ACCTGC 2 cut(s) 554, 610
BspPI GGATC 3 cut(s) 141, 809, 916
BspQI GCTCTTC 1 cut(s) 1256
BspT107I GGYRCC 5 cut(s) 87, 376, 419, 434, 1141
BspTNI GGTCTC 1 cut(s) 345
BsrDI GCAATG 2 cut(s) 270, 847
BsrFI RCCGGY 1 cut(s) 354
BsrI ACTGG 1 cut(s) 887
BssAI RCCGGY 1 cut(s) 354
BssECI CCNNGG 5 cut(s) 63, 782, 1073, 1193, 1290
BssMI GATC 8 cut(s) 133, 244, 585, 798, 814, 844, 921, 1003
BssT1I CCWWGG 4 cut(s) 63, 782, 1073, 1290
Bst2UI CCWGG 3 cut(s) 277, 1194, 1206
Bst6I CTCTTC 2 cut(s) 635, 1256
BstAPI GCANNNNNTGC 1 cut(s) 335
BstDEI CTNAG 7 cut(s) 359, 765, 819, 848, 861, 1166, 1220
BstDSI CCRYGG 3 cut(s) 63, 782, 1290
BstF5I GGATG 9 cut(s) 301, 331, 373, 538, 616, 658, 724, 739, 1085
BstH2I RGCGCY 1 cut(s) 1217
BstHHI GCGC 2 cut(s) 571, 1216
BstKTI GATC 8 cut(s) 136, 247, 588, 801, 817, 847, 924, 1006
BstMAI GTCTC 2 cut(s) 345, 1079
BstMBI GATC 8 cut(s) 133, 244, 585, 798, 814, 844, 921, 1003
BstMWI GCNNNNNNNGC 7 cut(s) 65, 74, 335, 464, 566, 577, 1333
BstNI CCWGG 3 cut(s) 277, 1194, 1206
BstSCI CCNGG 5 cut(s) 99, 275, 542, 1192, 1204
BstSFI CTRYAG 1 cut(s) 106
BstSLI GKGCMC 1 cut(s) 674
BstV1I GCAGC 3 cut(s) 71, 558, 1310
BstX2I RGATCY 1 cut(s) 133
BstXI CCANNNNNNTGG 1 cut(s) 1080
BstYI RGATCY 1 cut(s) 133
BsuRI GGCC 5 cut(s) 32, 68, 458, 542, 626
BtgI CCRYGG 3 cut(s) 63, 782, 1290
BtgZI GCGATG 1 cut(s) 482
BtsCI GGATG 9 cut(s) 301, 331, 373, 538, 616, 658, 724, 739, 1085
BtsI GCAGTG 1 cut(s) 254
BtsIMutI CAGTG 5 cut(s) 254, 641, 814, 894, 994
BveI ACCTGC 2 cut(s) 554, 610
CaiI CAGNNNCTG 1 cut(s) 1327
CfoI GCGC 2 cut(s) 571, 1216
Cfr10I RCCGGY 1 cut(s) 354
Cfr13I GGNCC 1 cut(s) 1310
Csp6I GTAC 4 cut(s) 88, 187, 1054, 1114
CviAII CATG 8 cut(s) 64, 415, 500, 581, 715, 783, 994, 1291
CviQI GTAC 4 cut(s) 88, 187, 1054, 1114
DdeI CTNAG 7 cut(s) 359, 765, 819, 848, 861, 1166, 1220
DpnI GATC 8 cut(s) 135, 246, 587, 800, 816, 846, 923, 1005
DpnII GATC 8 cut(s) 133, 244, 585, 798, 814, 844, 921, 1003
EaeI YGGCCR 2 cut(s) 66, 624
Eam1104I CTCTTC 2 cut(s) 635, 1256
EarI CTCTTC 2 cut(s) 635, 1256
Eco130I CCWWGG 4 cut(s) 63, 782, 1073, 1290
Eco147I AGGCCT 1 cut(s) 32
Eco31I GGTCTC 1 cut(s) 345
Eco47I GGWCC 1 cut(s) 1310
Eco57I CTGAAG 2 cut(s) 617, 971
Eco88I CYCGRG 1 cut(s) 1306
EcoRII CCWGG 3 cut(s) 275, 1192, 1204
EcoT14I CCWWGG 4 cut(s) 63, 782, 1073, 1290
ErhI CCWWGG 4 cut(s) 63, 782, 1073, 1290
FaeI CATG 8 cut(s) 67, 418, 503, 584, 718, 786, 997, 1294
FalI AAGNNNNNCTT 4 cut(s) 671, 703, 1238, 1270
FaqI GGGAC 3 cut(s) 736, 1184, 1210
FatI CATG 8 cut(s) 63, 414, 499, 580, 714, 782, 993, 1290
FbaI TGATCA 2 cut(s) 798, 1003
FblI GTMKAC 1 cut(s) 551
Fnu4HI GCNGC 5 cut(s) 60, 210, 561, 572, 1299
FokI GGATG 9 cut(s) 288, 338, 380, 545, 623, 665, 731, 746, 1092
Fsp4HI GCNGC 5 cut(s) 60, 210, 561, 572, 1299
GlaI GCGC 2 cut(s) 570, 1215
GluI GCNGC 5 cut(s) 60, 210, 561, 572, 1299
HaeII RGCGCY 1 cut(s) 1217
HaeIII GGCC 5 cut(s) 32, 68, 458, 542, 626
HapII CCGG 7 cut(s) 101, 305, 355, 404, 543, 708, 956
HhaI GCGC 2 cut(s) 571, 1216
Hin1II CATG 8 cut(s) 67, 418, 503, 584, 718, 786, 997, 1294
Hin6I GCGC 2 cut(s) 569, 1214
HinP1I GCGC 2 cut(s) 569, 1214
HindIII AAGCTT 1 cut(s) 473
HpaII CCGG 7 cut(s) 101, 305, 355, 404, 543, 708, 956
HphI GGTGA 3 cut(s) 808, 1111, 1145
Hpy166II GTNNAC 2 cut(s) 412, 552
Hpy188III TCNNGA 5 cut(s) 230, 305, 493, 708, 1313
Hpy8I GTNNAC 2 cut(s) 412, 552
HpyCH4V TGCA 2 cut(s) 118, 329
HpyF10VI GCNNNNNNNGC 7 cut(s) 65, 74, 335, 464, 566, 577, 1333
HpyF3I CTNAG 7 cut(s) 359, 765, 819, 848, 861, 1166, 1220
Hsp92II CATG 8 cut(s) 67, 418, 503, 584, 718, 786, 997, 1294
HspAI GCGC 2 cut(s) 569, 1214
Kpn2I TCCGGA 2 cut(s) 304, 707
KpnI GGTACC 1 cut(s) 91
Ksp22I TGATCA 2 cut(s) 798, 1003
Kzo9I GATC 8 cut(s) 133, 244, 585, 798, 814, 844, 921, 1003
LguI GCTCTTC 1 cut(s) 1256
LmnI GCTCC 3 cut(s) 778, 857, 958
Lsp1109I GCAGC 3 cut(s) 71, 558, 1310
LweI GCATC 3 cut(s) 310, 316, 1126
MaeIII GTNAC 2 cut(s) 95, 989
MalI GATC 8 cut(s) 135, 246, 587, 800, 816, 846, 923, 1005
MboI GATC 8 cut(s) 133, 244, 585, 798, 814, 844, 921, 1003
MboII GAAGA 4 cut(s) 208, 652, 691, 1243
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 1 cut(s) 674
MlsI TGGCCA 1 cut(s) 68
MluCI AATT 4 cut(s) 169, 318, 998, 1237
MluNI TGGCCA 1 cut(s) 68
MlyI GAGTC 5 cut(s) 227, 354, 718, 1166, 1192
MmeI TCCRAC 1 cut(s) 375
Mox20I TGGCCA 1 cut(s) 68
MroI TCCGGA 2 cut(s) 304, 707
MroXI GAANNNNTTC 1 cut(s) 284
MscI TGGCCA 1 cut(s) 68
MseI TTAA 2 cut(s) 516, 969
MslI CAYNNNNRTG 1 cut(s) 1289
Msp20I TGGCCA 1 cut(s) 68
MspI CCGG 7 cut(s) 101, 305, 355, 404, 543, 708, 956
MspR9I CCNGG 5 cut(s) 101, 277, 544, 1194, 1206
MvaI CCWGG 3 cut(s) 277, 1194, 1206
MwoI GCNNNNNNNGC 7 cut(s) 65, 74, 335, 464, 566, 577, 1333
NciI CCSGG 2 cut(s) 101, 544
NcoI CCATGG 3 cut(s) 63, 782, 1290
NdeII GATC 8 cut(s) 133, 244, 585, 798, 814, 844, 921, 1003
NlaIII CATG 8 cut(s) 67, 418, 503, 584, 718, 786, 997, 1294
NlaIV GGNNCC 7 cut(s) 89, 378, 421, 436, 780, 1143, 1311
NmeAIII GCCGAG 1 cut(s) 652
NmuCI GTSAC 2 cut(s) 95, 989
PaqCI CACCTGC 2 cut(s) 554, 610
PceI AGGCCT 1 cut(s) 32
PciSI GCTCTTC 1 cut(s) 1256
PdmI GAANNNNTTC 1 cut(s) 284
PfeI GAWTC 6 cut(s) 111, 296, 946, 1102, 1162, 1273
PflMI CCANNNNNTGG 1 cut(s) 429
PkrI GCNGC 5 cut(s) 61, 211, 562, 573, 1300
PleI GAGTC 5 cut(s) 227, 353, 718, 1166, 1192
PpsI GAGTC 5 cut(s) 227, 353, 718, 1166, 1192
Psp6I CCWGG 3 cut(s) 275, 1192, 1204
PspGI CCWGG 3 cut(s) 275, 1192, 1204
PspN4I GGNNCC 7 cut(s) 89, 378, 421, 436, 780, 1143, 1311
PspPI GGNCC 1 cut(s) 1310
PstNI CAGNNNCTG 1 cut(s) 1327
PsuI RGATCY 1 cut(s) 133
RsaI GTAC 4 cut(s) 89, 188, 1055, 1115
RsaNI GTAC 4 cut(s) 88, 187, 1054, 1114
RseI CAYNNNNRTG 1 cut(s) 1289
SapI GCTCTTC 1 cut(s) 1256
SaqAI TTAA 2 cut(s) 516, 969
SatI GCNGC 5 cut(s) 60, 210, 561, 572, 1299
Sau3AI GATC 8 cut(s) 133, 244, 585, 798, 814, 844, 921, 1003
Sau96I GGNCC 1 cut(s) 1310
ScaI AGTACT 1 cut(s) 188
SchI GAGTC 5 cut(s) 227, 354, 718, 1166, 1192
ScrFI CCNGG 5 cut(s) 101, 277, 544, 1194, 1206
SduI GDGCHC 1 cut(s) 674
SfaNI GCATC 3 cut(s) 310, 316, 1126
SfcI CTRYAG 1 cut(s) 106
SinI GGWCC 1 cut(s) 1310
SmiMI CAYNNNNRTG 1 cut(s) 1289
SmlI CTYRAG 1 cut(s) 1244
SmoI CTYRAG 1 cut(s) 1244
Sse9I AATT 4 cut(s) 169, 318, 998, 1237
SseBI AGGCCT 1 cut(s) 32
SsiI CCGC 5 cut(s) 209, 560, 578, 1051, 1139
StuI AGGCCT 1 cut(s) 32
StyD4I CCNGG 5 cut(s) 99, 275, 542, 1192, 1204
StyI CCWWGG 4 cut(s) 63, 782, 1073, 1290
TaqI TCGA 2 cut(s) 247, 1175
TasI AATT 4 cut(s) 169, 318, 998, 1237
TatI WGTACW 2 cut(s) 186, 1113
TauI GCSGC 2 cut(s) 212, 563
TfiI GAWTC 6 cut(s) 111, 296, 946, 1102, 1162, 1273
Tru1I TTAA 2 cut(s) 516, 969
Tru9I TTAA 2 cut(s) 516, 969
TscAI CASTG 5 cut(s) 261, 641, 814, 901, 994
TseFI GTSAC 2 cut(s) 95, 989
TseI GCWGC 3 cut(s) 59, 571, 1298
Tsp45I GTSAC 2 cut(s) 95, 989
TspDTI ATGAA 3 cut(s) 327, 485, 692
TspGWI ACGGA 1 cut(s) 1071
TspRI CASTG 5 cut(s) 261, 641, 814, 901, 994
Van91I CCANNNNNTGG 1 cut(s) 429
VpaK11BI GGWCC 1 cut(s) 1310
XapI RAATTY 3 cut(s) 169, 998, 1237
XmiI GTMKAC 1 cut(s) 551
XmnI GAANNNNTTC 1 cut(s) 284
ZrmI AGTACT 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.