FvH4_6g30070

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000255
Physical Location & Seq
Reverse (-)
23219767 .. 23223650
3884 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g30070.t1

Sequence Viewer

Length: 1470 bp
ATGGCTCCTTCAAGTCTCCTCGGCCCCCCACAGCTCCACCGATCCAATGTCCCCACCACCCAACCCGAACCCGCATCCGGCGATGCCTTCATCGACTCCCTAGTCTCCGACTTCAACAGCCTCAACAAACCAACAACCCCAAAACCCCCGATGGGCTTCACCGAGAACAACTCCGCCACATACCTCTCATCCGGCAACCCCTGCCTCGACCTTTTCTTCCACCGCGCTGAGGCATCAGAAGACTTGGAGATGGCCAAGAAGGCCATTGAGAGGTACCAACGAGACTCCGACTACCGGTTCTTATACGATCGGATTTCGGAGCTTTTCGCCGAGTGCTTGAAGTCTGATGTTGAGAATCTGAATGCCAAGGAGTATAAGAAGATCAGCCTTGCAGCCAAGTGGTGCCCTTCTACGGACTCGTCGTTTGATAGGGCTACATTGCTGTGTGAAAGCATAGCAAGGACTATTTTCCCTAGGGAATCGAACCCGGAATATGAAGGGATTGAGGAGGCTCATTATGTTTTTAGAATCCGGGACCGGCTGAGGAAGGAGATTCTGGTGCCGCTGAGGAAAGTGTTGGAGTTGCCGGAGGTTTATATTGGGGCTAATGACTGGAATTCGATTCCTTACAAGCGAGTCGCCTCGTTGGCGATGAAGATTTACAAGGGGAAGTTTTTCAAGCATGATGCAGAGAGGTTCAAGAAGTACTTGGAGGATGTGGAGGCCGGCAAGTCCAAGATTGCTGCCGGTGCACTGCTGCCGCACGAGATCATAACCTCTCTGAGGGACAGTGATGGCGCGCAAGTGGCCGAGCTTCAGTGGAAGAGGATGGTGGAGGATATGTTGAAGTTGGGGAAGATGAAGAATTGCTTGGCTGTGTGTGACGTGTCTGGGAGCATGAGTGGGGAGCCAATGGAGGTGTGTGTGGCTTTGGGGCTTTTGGTGTCTGAGCTGTGTGATCAGCCGTGGAAGGGGAAGGTGATCACCTTCAGTCGAGACCCTGCACTGCATTTAATACAAGGCGAAAGTCTTCAGTCGAAGACTAATTTCATAAGGAGGATGCACTGGGGGATGAACACTGATTTTCAGAAGGTGTTTGATTTGCTTCTCCAGGTGGCTGTCAAGGGGAATTTGAAGCCGGAGAATATGATCAAGAGGATTTTTGTGTTCAGTGACATGGAGTTTGATCAGGCCTCGACAAATAGATGGGAAACTGATTATGAGGTGATTCAGAGGAAGTATAGGGAGAAAGGGTATGGAGATGCTGTGCCACAGATAGTGTTTTGGAATCTGAGGGACTCGAGGTCTACTCCAGTGCCAGGGACTCAACCTGGGGTGGCTTTGTTGAGTGGCTTCTCCAAGAACTTGCTCAAATTGTTCCTGGATTACGATGGGGAAATCCGGCCTGATCTGACTATGGAATTGGCTATATCTGGCCCGGAGTATCAAAAGCTGGTTGTCCTGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

490

Amino Acids

55.56

Weight (kDa)

5.96

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 79 - 287 7.6e-84 Domain of unknown function (DUF2828)
DUF7788 PF25043 289 - 467 9.9e-81 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 101
Acc65I GGTACC 1 cut(s) 273
AccB1I GGYRCC 3 cut(s) 273, 402, 559
AccI GTMKAC 1 cut(s) 1307
AccII CGCG 2 cut(s) 225, 800
AciI CCGC 5 cut(s) 72, 174, 223, 563, 761
AclWI GGATC 1 cut(s) 36
AcoI YGGCCR 2 cut(s) 252, 807
AcsI RAATTY 2 cut(s) 616, 1129
AcuI CTGAAG 3 cut(s) 800, 973, 1016
AfaI GTAC 2 cut(s) 275, 707
AfiI CCNNNNNNNGG 9 cut(s) 77, 152, 229, 270, 294, 412, 783, 971, 1319
AflIII ACRYGT 1 cut(s) 885
AgeI ACCGGT 1 cut(s) 294
AgsI TTSAA 7 cut(s) 12, 115, 340, 679, 700, 847, 1135
AhdI GACNNNNNGTC 1 cut(s) 1303
AjiI CACGTC 1 cut(s) 886
AjnI CCWGG 5 cut(s) 1110, 1318, 1330, 1380, 1461
AjuI GAANNNNNNNTTGG 2 cut(s) 854, 886
AluBI AGCT 5 cut(s) 34, 322, 814, 952, 1453
AluI AGCT 5 cut(s) 34, 322, 814, 952, 1453
Alw21I GWGCWC 1 cut(s) 754
Alw26I GTCTC 4 cut(s) 20, 109, 276, 990
Alw44I GTGCAC 1 cut(s) 750
AlwI GGATC 1 cut(s) 36
Ama87I CYCGRG 1 cut(s) 1300
AoxI GGCC 8 cut(s) 22, 252, 261, 723, 807, 1191, 1403, 1435
ApaLI GTGCAC 1 cut(s) 750
ApeKI GCWGC 3 cut(s) 392, 743, 757
ApoI RAATTY 2 cut(s) 616, 1129
ArsI GACNNNNNNTTYG 4 cut(s) 407, 439, 1166, 1198
AsiGI ACCGGT 1 cut(s) 294
Asp700I GAANNNNTTC 2 cut(s) 674, 1029
Asp718I GGTACC 1 cut(s) 273
AspA2I CCTAGG 1 cut(s) 473
AspLEI GCGC 3 cut(s) 227, 800, 802
AspS9I GGNCC 3 cut(s) 23, 535, 1436
AsuC2I CCSGG 3 cut(s) 488, 533, 1439
AsuHPI GGTGA 4 cut(s) 151, 976, 991, 1237
AvaI CYCGRG 1 cut(s) 1300
AvaII GGWCC 1 cut(s) 535
AvrII CCTAGG 1 cut(s) 473
BaeGI GKGCMC 2 cut(s) 407, 754
BalI TGGCCA 1 cut(s) 254
BanI GGYRCC 3 cut(s) 273, 402, 559
BauI CACGAG 1 cut(s) 764
BbsI GAAGAC 3 cut(s) 246, 1022, 1046
Bbv12I GWGCWC 1 cut(s) 754
BbvCI CCTCAGC 3 cut(s) 228, 542, 566
BbvI GCAGC 3 cut(s) 404, 730, 744
BccI CCATC 6 cut(s) 145, 244, 788, 823, 1200, 1385
BceAI ACGGC 1 cut(s) 949
BciT130I CCWGG 5 cut(s) 1112, 1320, 1332, 1382, 1463
BclI TGATCA 4 cut(s) 958, 981, 1149, 1186
BcnI CCSGG 3 cut(s) 488, 533, 1439
BcoDI GTCTC 4 cut(s) 20, 109, 276, 990
BfaI CTAG 2 cut(s) 101, 474
BglI GCCNNNNNGGC 2 cut(s) 260, 647
BisI GCNGC 5 cut(s) 393, 563, 744, 758, 761
BlnI CCTAGG 1 cut(s) 473
BlsI GCNGC 5 cut(s) 394, 564, 745, 759, 762
BmcAI AGTACT 1 cut(s) 707
Bme1390I CCNGG 8 cut(s) 488, 533, 1112, 1320, 1332, 1382, 1439, 1463
Bme18I GGWCC 1 cut(s) 535
BmeRI GACNNNNNGTC 1 cut(s) 1303
BmeT110I CYCGRG 1 cut(s) 1300
BmgBI CACGTC 1 cut(s) 886
BmgT120I GGNCC 3 cut(s) 23, 535, 1436
BmiI GGNNCC 7 cut(s) 6, 25, 275, 404, 536, 561, 909
BmrFI CCNGG 8 cut(s) 488, 533, 1112, 1320, 1332, 1382, 1439, 1463
BmrI ACTGGG 1 cut(s) 1075
BmsI GCATC 6 cut(s) 73, 83, 242, 676, 1050, 1252
BmuI ACTGGG 1 cut(s) 1075
BpiI GAAGAC 3 cut(s) 246, 1022, 1046
BplI GAGNNNNNCTC 4 cut(s) 155, 187, 1294, 1326
BpmI CTGGAG 2 cut(s) 1094, 1296
Bpu10I CCTNAGC 3 cut(s) 228, 542, 566
BpuMI CCSGG 3 cut(s) 488, 533, 1439
BsaI GGTCTC 1 cut(s) 990
BsaJI CCNNGG 6 cut(s) 19, 366, 473, 965, 1319, 1331
BsaWI WCCGGW 1 cut(s) 294
BsaXI ACNNNNNCTCC 8 cut(s) 827, 857, 886, 916, 1238, 1251, 1268, 1281
Bsc4I CCNNNNNNNGG 9 cut(s) 77, 152, 229, 270, 294, 412, 783, 971, 1319
Bse118I RCCGGY 4 cut(s) 294, 537, 725, 746
Bse1I ACTGG 3 cut(s) 617, 1070, 1313
Bse3DI GCAATG 1 cut(s) 437
BseBI CCWGG 5 cut(s) 1112, 1320, 1332, 1382, 1463
BseDI CCNNGG 6 cut(s) 19, 366, 473, 965, 1319, 1331
BseGI GGATG 6 cut(s) 74, 188, 721, 834, 1065, 1077
BseLI CCNNNNNNNGG 9 cut(s) 77, 152, 229, 270, 294, 412, 783, 971, 1319
BseMI GCAATG 1 cut(s) 437
BseMII CTCAG 6 cut(s) 219, 533, 557, 773, 939, 1283
BseNI ACTGG 3 cut(s) 617, 1070, 1313
BsePI GCGCGC 1 cut(s) 798
BseRI GAGGAG 2 cut(s) 8, 521
BseSI GKGCMC 2 cut(s) 407, 754
BseXI GCAGC 3 cut(s) 404, 730, 744
BsgI GTGCAG 1 cut(s) 987
Bsh1236I CGCG 2 cut(s) 225, 800
Bsh1285I CGRYCG 1 cut(s) 310
BshFI GGCC 8 cut(s) 24, 254, 263, 725, 809, 1193, 1405, 1437
BshNI GGYRCC 3 cut(s) 273, 402, 559
BshTI ACCGGT 1 cut(s) 294
BsiEI CGRYCG 1 cut(s) 310
BsiHKAI GWGCWC 1 cut(s) 754
BsiHKCI CYCGRG 1 cut(s) 1300
BslFI GGGAC 5 cut(s) 35, 548, 800, 1310, 1336
BslI CCNNNNNNNGG 9 cut(s) 77, 152, 229, 270, 294, 412, 783, 971, 1319
BsmAI GTCTC 4 cut(s) 20, 109, 276, 990
BsmFI GGGAC 5 cut(s) 35, 548, 800, 1310, 1336
BsmI GAATGC 1 cut(s) 367
BsnI GGCC 8 cut(s) 24, 254, 263, 725, 809, 1193, 1405, 1437
Bso31I GGTCTC 1 cut(s) 990
BsoBI CYCGRG 1 cut(s) 1300
Bsp1286I GDGCHC 2 cut(s) 407, 754
Bsp143I GATC 9 cut(s) 41, 307, 381, 768, 958, 981, 1149, 1186, 1408
BspACI CCGC 5 cut(s) 72, 174, 223, 563, 761
BspANI GGCC 8 cut(s) 24, 254, 263, 725, 809, 1193, 1405, 1437
BspCNI CTCAG 6 cut(s) 220, 534, 558, 774, 940, 1284
BspFNI CGCG 2 cut(s) 225, 800
BspLI GGNNCC 7 cut(s) 6, 25, 275, 404, 536, 561, 909
BspPI GGATC 1 cut(s) 36
BspT107I GGYRCC 3 cut(s) 273, 402, 559
BspTNI GGTCTC 1 cut(s) 990
BsrDI GCAATG 1 cut(s) 437
BsrFI RCCGGY 4 cut(s) 294, 537, 725, 746
BsrI ACTGG 3 cut(s) 617, 1070, 1313
BssAI RCCGGY 4 cut(s) 294, 537, 725, 746
BssECI CCNNGG 6 cut(s) 19, 366, 473, 965, 1319, 1331
BssHII GCGCGC 1 cut(s) 798
BssMI GATC 9 cut(s) 41, 307, 381, 768, 958, 981, 1149, 1186, 1408
BssSI CACGAG 1 cut(s) 764
BssT1I CCWWGG 2 cut(s) 366, 473
Bst2BI CACGAG 1 cut(s) 764
Bst2UI CCWGG 5 cut(s) 1112, 1320, 1332, 1382, 1463
Bst4CI ACNGT 1 cut(s) 791
Bst6I CTCTTC 1 cut(s) 818
BstAPI GCANNNNNTGC 1 cut(s) 201
BstC8I GCNNGC 2 cut(s) 727, 800
BstDEI CTNAG 6 cut(s) 228, 542, 566, 782, 948, 1292
BstDSI CCRYGG 1 cut(s) 965
BstENI CCTNNNNNAGG 1 cut(s) 781
BstF5I GGATG 6 cut(s) 74, 188, 721, 834, 1065, 1077
BstFNI CGCG 2 cut(s) 225, 800
BstHHI GCGC 3 cut(s) 227, 800, 802
BstKTI GATC 9 cut(s) 44, 310, 384, 771, 961, 984, 1152, 1189, 1411
BstMAI GTCTC 4 cut(s) 20, 109, 276, 990
BstMBI GATC 9 cut(s) 41, 307, 381, 768, 958, 981, 1149, 1186, 1408
BstMCI CGRYCG 1 cut(s) 310
BstMWI GCNNNNNNNGC 5 cut(s) 201, 260, 647, 749, 806
BstNI CCWGG 5 cut(s) 1112, 1320, 1332, 1382, 1463
BstSCI CCNGG 8 cut(s) 486, 531, 1110, 1318, 1330, 1380, 1437, 1461
BstSLI GKGCMC 2 cut(s) 407, 754
BstUI CGCG 2 cut(s) 225, 800
BstV1I GCAGC 3 cut(s) 404, 730, 744
BstV2I GAAGAC 3 cut(s) 246, 1022, 1046
BsuRI GGCC 8 cut(s) 24, 254, 263, 725, 809, 1193, 1405, 1437
BtgI CCRYGG 1 cut(s) 965
BtgZI GCGATG 2 cut(s) 96, 665
BtrI CACGTC 1 cut(s) 886
BtsCI GGATG 6 cut(s) 74, 188, 721, 834, 1065, 1077
BtsI GCAGTG 2 cut(s) 752, 1004
BtsIMutI CAGTG 8 cut(s) 752, 796, 824, 1004, 1063, 1077, 1177, 1320
Cac8I GCNNGC 2 cut(s) 727, 800
CfoI GCGC 3 cut(s) 227, 800, 802
Cfr10I RCCGGY 4 cut(s) 294, 537, 725, 746
Cfr13I GGNCC 3 cut(s) 23, 535, 1436
Csp6I GTAC 2 cut(s) 274, 706
CspAI ACCGGT 1 cut(s) 294
CviAII CATG 3 cut(s) 683, 898, 1177
CviQI GTAC 2 cut(s) 274, 706
DdeI CTNAG 6 cut(s) 228, 542, 566, 782, 948, 1292
DpnI GATC 9 cut(s) 43, 309, 383, 770, 960, 983, 1151, 1188, 1410
DpnII GATC 9 cut(s) 41, 307, 381, 768, 958, 981, 1149, 1186, 1408
DrdI GACNNNNNNGTC 1 cut(s) 101
DriI GACNNNNNGTC 1 cut(s) 1303
DseDI GACNNNNNNGTC 1 cut(s) 101
EaeI YGGCCR 2 cut(s) 252, 807
Eam1104I CTCTTC 1 cut(s) 818
Eam1105I GACNNNNNGTC 1 cut(s) 1303
EarI CTCTTC 1 cut(s) 818
EciI GGCGGA 1 cut(s) 163
Eco130I CCWWGG 2 cut(s) 366, 473
Eco147I AGGCCT 1 cut(s) 1193
Eco31I GGTCTC 1 cut(s) 990
Eco47I GGWCC 1 cut(s) 535
Eco57I CTGAAG 3 cut(s) 800, 973, 1016
Eco88I CYCGRG 1 cut(s) 1300
EcoNI CCTNNNNNAGG 1 cut(s) 781
EcoRI GAATTC 1 cut(s) 616
EcoRII CCWGG 5 cut(s) 1110, 1318, 1330, 1380, 1461
EcoT14I CCWWGG 2 cut(s) 366, 473
ErhI CCWWGG 2 cut(s) 366, 473
FaeI CATG 3 cut(s) 686, 901, 1180
FalI AAGNNNNNCTT 4 cut(s) 692, 724, 854, 886
FaqI GGGAC 5 cut(s) 35, 548, 800, 1310, 1336
FatI CATG 3 cut(s) 682, 897, 1176
FauI CCCGC 1 cut(s) 79
FbaI TGATCA 4 cut(s) 958, 981, 1149, 1186
FblI GTMKAC 1 cut(s) 1307
Fnu4HI GCNGC 5 cut(s) 393, 563, 744, 758, 761
FokI GGATG 6 cut(s) 61, 175, 728, 841, 1072, 1084
Fsp4HI GCNGC 5 cut(s) 393, 563, 744, 758, 761
FspBI CTAG 2 cut(s) 101, 474
GlaI GCGC 3 cut(s) 226, 799, 801
GluI GCNGC 5 cut(s) 393, 563, 744, 758, 761
GsuI CTGGAG 2 cut(s) 1094, 1296
HaeIII GGCC 8 cut(s) 24, 254, 263, 725, 809, 1193, 1405, 1437
HhaI GCGC 3 cut(s) 227, 800, 802
Hin1II CATG 3 cut(s) 686, 901, 1180
Hin6I GCGC 3 cut(s) 225, 798, 800
HinP1I GCGC 3 cut(s) 225, 798, 800
HphI GGTGA 4 cut(s) 151, 976, 991, 1237
Hpy166II GTNNAC 2 cut(s) 752, 1308
Hpy188III TCNNGA 3 cut(s) 700, 995, 1153
Hpy8I GTNNAC 2 cut(s) 752, 1308
Hpy99I CGWCG 1 cut(s) 424
HpyCH4III ACNGT 1 cut(s) 791
HpyCH4IV ACGT 1 cut(s) 885
HpyCH4V TGCA 6 cut(s) 392, 689, 752, 1004, 1009, 1063
HpyF10VI GCNNNNNNNGC 5 cut(s) 201, 260, 647, 749, 806
HpyF3I CTNAG 6 cut(s) 228, 542, 566, 782, 948, 1292
HpySE526I ACGT 1 cut(s) 885
Hsp92II CATG 3 cut(s) 686, 901, 1180
HspAI GCGC 3 cut(s) 225, 798, 800
KpnI GGTACC 1 cut(s) 277
KroI GCCGGC 1 cut(s) 725
KroNI GCCGGC 1 cut(s) 727
Ksp22I TGATCA 4 cut(s) 958, 981, 1149, 1186
Kzo9I GATC 9 cut(s) 41, 307, 381, 768, 958, 981, 1149, 1186, 1408
LmnI GCTCC 5 cut(s) 10, 39, 319, 894, 907
Lsp1109I GCAGC 3 cut(s) 404, 730, 744
LweI GCATC 6 cut(s) 73, 83, 242, 676, 1050, 1252
MaeI CTAG 2 cut(s) 101, 474
MaeII ACGT 1 cut(s) 885
MaeIII GTNAC 2 cut(s) 881, 1172
MalI GATC 9 cut(s) 43, 309, 383, 770, 960, 983, 1151, 1188, 1410
MboI GATC 9 cut(s) 41, 307, 381, 768, 958, 981, 1149, 1186, 1408
MboII GAAGA 9 cut(s) 208, 251, 391, 667, 835, 868, 874, 1022, 1051
MhlI GDGCHC 2 cut(s) 407, 754
MlsI TGGCCA 1 cut(s) 254
MluCI AATT 6 cut(s) 616, 865, 1045, 1129, 1373, 1421
MluNI TGGCCA 1 cut(s) 254
MlyI GAGTC 6 cut(s) 89, 278, 410, 645, 1292, 1318
MmeI TCCRAC 3 cut(s) 132, 312, 558
Mox20I TGGCCA 1 cut(s) 254
MroNI GCCGGC 1 cut(s) 725
MroXI GAANNNNTTC 2 cut(s) 674, 1029
MscI TGGCCA 1 cut(s) 254
MseI TTAA 1 cut(s) 1013
MslI CAYNNNNRTG 1 cut(s) 442
Msp20I TGGCCA 1 cut(s) 254
MspA1I CMGCKG 1 cut(s) 565
MspR9I CCNGG 8 cut(s) 488, 533, 1112, 1320, 1332, 1382, 1439, 1463
Mva1269I GAATGC 1 cut(s) 367
MvaI CCWGG 5 cut(s) 1112, 1320, 1332, 1382, 1463
MvnI CGCG 2 cut(s) 225, 800
MwoI GCNNNNNNNGC 5 cut(s) 201, 260, 647, 749, 806
NaeI GCCGGC 1 cut(s) 727
NciI CCSGG 3 cut(s) 488, 533, 1439
NdeII GATC 9 cut(s) 41, 307, 381, 768, 958, 981, 1149, 1186, 1408
NgoMIV GCCGGC 1 cut(s) 725
NlaIII CATG 3 cut(s) 686, 901, 1180
NlaIV GGNNCC 7 cut(s) 6, 25, 275, 404, 536, 561, 909
NmeAIII GCCGAG 2 cut(s) 355, 835
NmuCI GTSAC 2 cut(s) 881, 1172
PaeR7I CTCGAG 1 cut(s) 1300
PauI GCGCGC 1 cut(s) 798
PceI AGGCCT 1 cut(s) 1193
PcsI WCGNNNNNNNCGW 1 cut(s) 419
PctI GAATGC 1 cut(s) 367
PdiI GCCGGC 1 cut(s) 727
PdmI GAANNNNTTC 2 cut(s) 674, 1029
PfeI GAWTC 7 cut(s) 355, 479, 528, 553, 622, 1228, 1288
PfoI TCCNGGA 3 cut(s) 531, 1380, 1461
PinAI ACCGGT 1 cut(s) 294
PkrI GCNGC 5 cut(s) 394, 564, 745, 759, 762
Ple19I CGATCG 1 cut(s) 310
PleI GAGTC 6 cut(s) 89, 278, 410, 644, 1292, 1318
PpsI GAGTC 6 cut(s) 89, 278, 410, 644, 1292, 1318
Psp6I CCWGG 5 cut(s) 1110, 1318, 1330, 1380, 1461
PspGI CCWGG 5 cut(s) 1110, 1318, 1330, 1380, 1461
PspN4I GGNNCC 7 cut(s) 6, 25, 275, 404, 536, 561, 909
PspPI GGNCC 3 cut(s) 23, 535, 1436
PspXI VCTCGAGB 1 cut(s) 1300
PteI GCGCGC 1 cut(s) 798
PvuI CGATCG 1 cut(s) 310
RsaI GTAC 2 cut(s) 275, 707
RsaNI GTAC 2 cut(s) 274, 706
RseI CAYNNNNRTG 1 cut(s) 442
SaqAI TTAA 1 cut(s) 1013
SatI GCNGC 5 cut(s) 393, 563, 744, 758, 761
Sau3AI GATC 9 cut(s) 41, 307, 381, 768, 958, 981, 1149, 1186, 1408
Sau96I GGNCC 3 cut(s) 23, 535, 1436
ScaI AGTACT 1 cut(s) 707
SchI GAGTC 6 cut(s) 89, 278, 410, 645, 1292, 1318
ScrFI CCNGG 8 cut(s) 488, 533, 1112, 1320, 1332, 1382, 1439, 1463
SduI GDGCHC 2 cut(s) 407, 754
SfaNI GCATC 6 cut(s) 73, 83, 242, 676, 1050, 1252
SfiI GGCCNNNNNGGCC 1 cut(s) 260
Sfr274I CTCGAG 1 cut(s) 1300
SinI GGWCC 1 cut(s) 535
SlaI CTCGAG 1 cut(s) 1300
SmiMI CAYNNNNRTG 1 cut(s) 442
SmlI CTYRAG 1 cut(s) 1300
SmoI CTYRAG 1 cut(s) 1300
Sse9I AATT 6 cut(s) 616, 865, 1045, 1129, 1373, 1421
SseBI AGGCCT 1 cut(s) 1193
SsiI CCGC 5 cut(s) 72, 174, 223, 563, 761
SspMI CTAG 2 cut(s) 101, 474
StuI AGGCCT 1 cut(s) 1193
StyD4I CCNGG 8 cut(s) 486, 531, 1110, 1318, 1330, 1380, 1437, 1461
StyI CCWWGG 2 cut(s) 366, 473
TaaI ACNGT 1 cut(s) 791
TaiI ACGT 1 cut(s) 888
TaqI TCGA 8 cut(s) 93, 207, 482, 620, 994, 1037, 1196, 1301
TasI AATT 6 cut(s) 616, 865, 1045, 1129, 1373, 1421
TatI WGTACW 1 cut(s) 705
TauI GCSGC 2 cut(s) 565, 763
TfiI GAWTC 7 cut(s) 355, 479, 528, 553, 622, 1228, 1288
Tru1I TTAA 1 cut(s) 1013
Tru9I TTAA 1 cut(s) 1013
TscAI CASTG 8 cut(s) 759, 796, 824, 1011, 1070, 1084, 1177, 1320
TseFI GTSAC 2 cut(s) 881, 1172
TseI GCWGC 3 cut(s) 392, 743, 757
Tsp45I GTSAC 2 cut(s) 881, 1172
TspDTI ATGAA 6 cut(s) 79, 510, 668, 875, 1039, 1088
TspGWI ACGGA 1 cut(s) 428
TspRI CASTG 8 cut(s) 759, 796, 824, 1011, 1070, 1084, 1177, 1320
VneI GTGCAC 1 cut(s) 750
VpaK11BI GGWCC 1 cut(s) 535
XagI CCTNNNNNAGG 1 cut(s) 781
XapI RAATTY 2 cut(s) 616, 1129
XhoI CTCGAG 1 cut(s) 1300
XmaJI CCTAGG 1 cut(s) 473
XmiI GTMKAC 1 cut(s) 1307
XmnI GAANNNNTTC 2 cut(s) 674, 1029
XspI CTAG 2 cut(s) 101, 474
ZrmI AGTACT 1 cut(s) 707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.